Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0001557

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG183800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2505 bp

ATGGCTAATCCTACTTACCAGGAATCCTTGTCATTTGGAGGCCCAGACCATCCTCAGGGTCAAGAAGTTATTCCATTTGAGAGTGGAACCCTGAAGATTTTGCTACATGGCTCCCTAGTCATATGGGTCAAGAAGGCCGAAAACCTTCCTGACATGGAGAGTTTTCGCAAGCATGTGGGGCATGCAATTGCGAAGTTGCCTGGGACGAGACGCAAAAATATTATCAGTTCTCCATATGTTACGATTTCTTTATCAAATGCTGTGATTGGGAGGACCTTTGTGATGAGTAGTACAGAGAACCCTGTGTGGGAGCAACATTTTGATGTTCCTGTTGCTCATTATGCTTCACGAGTGAACTTTGTTGTGAAACACAGTGATGTTTTCGGCTCTAAGACCATAGGTTTTGTTGGAATCTCAGCTCAACAGTTGTACTCTGGCATCAAAGTTGAGGGAACCTTCCCTATCCTTGACACTACCAGTGGTAAAAGCTGTATGCCTGGAGCTGTGTTGAGCTTGTCAATTCAGTACACCGCGATTGAAAAAATGGCATTTTATAATCGCGGAGTAGGTTTAGATCCTGATCATCAAGGGGTCCCTGGTACTTACTTTCCTGTTAGGAAAGGCGGTAAAGTTACTCTTTATCAAGATGCTCATGTTCCTGATGGTTGCCTCCCCAACTTCAAGCTTGACGGCGGTCTTAAGTACGAGCATGGAAATTGTTGGCAAGACATATTTGATGCAATAAGTCAGGCCCGCCGTTTGATATACATAGCTGGGTGGTCACTGCACCCCAAAGTCAGATTGCTTCGGAATAATAATGGTTCATCAGATAGCACATTAGGTGATCTGCTGAAGACCAAGTCACAGGAAGGTGTGAAAGTTCTGCTTCTTGTTTGGGACGATCCAACTTCTATTAAGGGAATTAAAATGGAAGCTGGAATAGTCTATACCCATCATCAGAAAACTGTAATTGTGGACGCTGATGCTGGACATATTAAAAGAAAGATCATTGCATTTGTTGGAGGTCTTGACTTGTGCTTGGGACGTTATGATACTCCGGAGCATTCTATATTTAGGACCTTACGTTCAGTGCACAAGGATGACAATCGTAACCCTACTTTCTCGAAACCCGTTATTGGGTGTCCAAGGCAGCCATGGCATGATTTGCACAGTAAAATTGATGGTCCAGCTGCTTATGACATCCTCACCAATTTTGAGCAGCGTTGGGGGATGGCTTCAAAACCACATGGTCTTCACAAACTAAAAGAACGAGGACTTCAAAAACTGAAATTACGAGGAGATGATGATGATGCATTAATCAAGATTGAGAAAATTCCTGAAATTCTTGGGATGACAGAGGTTCCTCGCTTGAGTGAGGATGATAAAGAAGCTTGGGATATTCAGGTTTTCCGTTCAATTGATTCCCATTCAGTGCAAGGATTTCCCGAAGACACTGGAGAAGCTACAAGGATGAACCTTGTTTGTGGGAAAAATGTGCTGATAGACATGAGTATACATGCAGCATATGTAAAAGCAATCCGTGCTGCTCAACATTTTATTTACATAGAGAACCAGTACTTTATTGGATCATCATATAATTGGAAGTCAAACATTGGTGATAGTGATACAGGTGCAAACAATTTGATACCGATGGAAATTGCTCTGAAAATAGCAAACAAAATCAAAGCAAATGAGAAGTTTTCTGTATATATTGTCATCCCCATGTGGCCAGAAGGTGATCCCAATGATATGCCCCTTCAAAGAATTCTCCTTTGGCAGCATAAAACAATGCAAATGATGTATGAAATGATTTACAAGGCTCTAAAGGAGGTTGGACTTGAAAACACGTACTGTCCACAAGACTATTTGAATTTCTTTTGCCTTGGGAATCGTGAGACACTAAGTGGAGAAGACAATTCTGCTCCAAATAATTTAAGTGAAGCAAACACTCCTCAAGCACTCACCCTGAAGAATCGGCGGTTTATGATTTATGTTCATTCTAAAGGAATGATAGTGGACGATGAATATGTTATACTAGGATCTGCAAATATCAATCAGCGATCCATGGAAGGTCCCCGAGATACTGAAATAGCAATGGGGGCTTATCAGCCTCATCATACTTGGACAAGAAAACTCTCTAGTCCACATGGAAAGGTATATGGATATAGAATGTCACTGTGGGCAGAGCATATAGGACTTGTCGAAGAATGTTTCAAGCAGCCAGAGAGTCTTGAATGTGTCCGAAGGGTAAGGTCTTTGAGTGAGCAGAACTGGAGTCAATACGTAGCCAATGAAGTCACAGAAATGAAGGGTCACCTCCTCAAGTATCCGGTTAAAGTTGGTCCAACTGGCGAGGTGGAGCCTCTTCCAAGCTGTGCAGCATTTCCAGATGTCGGTGGCTACATACTGGGGAGTCTCGGCGACATAGGGAAGAGTCTAGGGATCGGTAGTATTAATGGGAGGGGAATATCATTCAGGGCCATGCAAGAAAATCTCACCATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005488 GO:0005543 GO:0005546 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005886 GO:0005911 GO:0006629 GO:0006643 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008289 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009790 GO:0009791 GO:0009793 GO:0009814 GO:0009816 GO:0009987 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0022414 GO:0022626 GO:0030054 GO:0032501 GO:0032502 GO:0032991 GO:0035091 GO:0042221 GO:0042578 GO:0042742 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0045087 GO:0046686 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0061458 GO:0071704 GO:0071944 GO:0098542 GO:1901981 GO:1902936 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

834

Amino Acids

93.23

Weight (kDa)

7.18

Isoelectric Point (pI)

38.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	37 - 154	5.2e-13	C2 domain
PLDc_2	PF13091	661 - 694	8.9e-06	PLD-like domain
PLDc	PF00614	663 - 688	8e-08	Phospholipase D Active site motif
PLD_C	PF12357	735 - 805	3.6e-29	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11830 AT4G11830 AT4G11830 AT4G11830 AT4G11840 AT4G11840 AT4G11850
fragaria_vesca	FvH4_5g01274 FvH4_5g01290 FvH4_5g01290 FvH4_5g01290
malus_domestica	MD04G1069600.v1.1
prunus_persica	Prupe.5G088300_v2.0.a1 Prupe.5G088300_v2.0.a1
pyrus_communis	pycom04g06330
rosa_chinensis	RchiOBHm_Chr4g0413221 RchiOBHm_Chr7g0199651 RchiOBHm_Chr7g0199691 RchiOBHm_Chr7g0199711 RchiOBHm_Chr7g0199731
rosa_laevigata	RLG00000003775 RLG00000003776 RLG00000003777 RLG00000003778 RLG00000003779
rosa_multiflora	Rmu_co8400099.1_g000001 Rmu_sc0002748.1_g000025 Rmu_sc0002748.1_g000027 Rmu_sc0002748.1_g000028 Rmu_sc0009191.1_g000004
rosa_roxburghii	Rroxscaffold_3G00256480 Rroxscaffold_3G00256490 Rroxscaffold_3G00256520
rosa_rugosa	Rorug07G0055600 Rorug07G0055800 Rorug07G0055900
rosa_samantha	Rh7AG180700 Rh7AG181000 Rh7AG181200 Rh7BG183600 Rh7BG183900 Rh7BG184100 Rh7CG190400 Rh7CG190600 Rh7CG190700 Rh7DG183600 Rh7DG183800
rosa_wichuraiana	Rw7G015870 Rw7G015880 Rw7G015890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	555
AccI	GTMKAC	1 cut(s)	1513
AccII	CGCG	2 cut(s)	533, 561
AccIII	TCCGGA	1 cut(s)	1057
AciI	CCGC	6 cut(s)	531, 561, 624, 693, 754, 1978
AclWI	GGATC	7 cut(s)	569, 896, 1594, 1733, 2047, 2055, 2450
AcoI	YGGCCR	1 cut(s)	1727
AcsI	RAATTY	4 cut(s)	1332, 1341, 1764, 1870
AcuI	CTGAAG	3 cut(s)	113, 872, 1988
AdeI	CACNNNGTG	1 cut(s)	1904
AfaI	GTAC	7 cut(s)	292, 431, 527, 601, 704, 1577, 1850
AfiI	CCNNNNNNNGG	5 cut(s)	55, 307, 1136, 1137, 2393
AflII	CTTAAG	1 cut(s)	698
AflIII	ACRYGT	1 cut(s)	1845
AjnI	CCWGG	4 cut(s)	18, 199, 496, 595
AjuI	GAANNNNNNNTTGG	2 cut(s)	1756, 1788
AloI	GAACNNNNNNTCC	2 cut(s)	1069, 1101
Alw21I	GWGCWC	1 cut(s)	1095
Alw26I	GTCTC	3 cut(s)	202, 1889, 2420
Alw44I	GTGCAC	1 cut(s)	1091
AlwI	GGATC	7 cut(s)	569, 896, 1594, 1733, 2047, 2055, 2450
Ama87I	CYCGRG	1 cut(s)	2076
Aor13HI	TCCGGA	1 cut(s)	1057
AoxI	GGCC	5 cut(s)	40, 135, 750, 1727, 2478
ApaLI	GTGCAC	1 cut(s)	1091
ApeKI	GCWGC	8 cut(s)	1150, 1190, 1219, 1520, 1544, 1777, 2218, 2378
ApoI	RAATTY	4 cut(s)	1332, 1341, 1764, 1870
AseI	ATTAAT	2 cut(s)	1316, 2454
Asp700I	GAANNNNTTC	2 cut(s)	69, 144
AspS9I	GGNCC	9 cut(s)	41, 273, 592, 751, 1077, 1184, 2072, 2342, 2478
AsuHPI	GGTGA	7 cut(s)	854, 1198, 1628, 1748, 1954, 2306, 2488
AvaI	CYCGRG	1 cut(s)	2076
AvaII	GGWCC	6 cut(s)	273, 592, 1077, 1184, 2072, 2342
AxyI	CCTNAGG	1 cut(s)	54
BaeGI	GKGCMC	1 cut(s)	1095
BalI	TGGCCA	1 cut(s)	1729
BauI	CACGAG	1 cut(s)	348
BbsI	GAAGAC	4 cut(s)	860, 1244, 1455, 1917
Bbv12I	GWGCWC	1 cut(s)	1095
BbvI	GCAGC	8 cut(s)	1162, 1177, 1231, 1531, 1532, 1789, 2230, 2390
BccI	CCATC	6 cut(s)	57, 656, 960, 1175, 1225, 1645
BceAI	ACGGC	2 cut(s)	706, 741
BciT130I	CCWGG	4 cut(s)	20, 201, 498, 597
BciVI	GTATCC	1 cut(s)	2337
BclI	TGATCA	1 cut(s)	580
BcoDI	GTCTC	3 cut(s)	202, 1889, 2420
BfaI	CTAG	4 cut(s)	116, 2036, 2139, 2438
BfrI	CTTAAG	1 cut(s)	698
BfuI	GTATCC	1 cut(s)	2337
BisI	GCNGC	8 cut(s)	1151, 1191, 1220, 1521, 1545, 1778, 2219, 2379
BlsI	GCNGC	8 cut(s)	1152, 1192, 1221, 1522, 1546, 1779, 2220, 2380
BmcAI	AGTACT	1 cut(s)	1577
Bme1390I	CCNGG	4 cut(s)	20, 201, 498, 597
Bme18I	GGWCC	6 cut(s)	273, 592, 1077, 1184, 2072, 2342
BmeT110I	CYCGRG	1 cut(s)	2076
BmgT120I	GGNCC	9 cut(s)	41, 273, 592, 751, 1077, 1184, 2072, 2342, 2478
BmiI	GGNNCC	8 cut(s)	88, 112, 454, 593, 594, 1362, 2074, 2361
BmrFI	CCNGG	4 cut(s)	20, 201, 498, 597
BmrI	ACTGGG	1 cut(s)	2417
BmsI	GCATC	5 cut(s)	447, 637, 727, 973, 1300
BmuI	ACTGGG	1 cut(s)	2417
BoxI	GACNNNNGTC	1 cut(s)	693
BpiI	GAAGAC	4 cut(s)	860, 1244, 1455, 1917
BpmI	CTGGAG	3 cut(s)	519, 1476, 2293
BpuEI	CTTGAG	3 cut(s)	1390, 1938, 2306
BsaAI	YACGTR	2 cut(s)	1848, 2284
BsaBI	GATNNNNATC	2 cut(s)	579, 1104
BsaJI	CCNNGG	6 cut(s)	200, 595, 1145, 1154, 1882, 2064
BsaWI	WCCGGW	2 cut(s)	1057, 2329
Bsc4I	CCNNNNNNNGG	5 cut(s)	55, 307, 1136, 1137, 2393
Bse1I	ACTGG	6 cut(s)	477, 1459, 1573, 2276, 2353, 2412
Bse21I	CCTNAGG	1 cut(s)	54
Bse3DI	GCAATG	2 cut(s)	1008, 2100
Bse8I	GATNNNNATC	2 cut(s)	579, 1104
BseAI	TCCGGA	1 cut(s)	1057
BseBI	CCWGG	4 cut(s)	20, 201, 498, 597
BseDI	CCNNGG	6 cut(s)	200, 595, 1145, 1154, 1882, 2064
BseGI	GGATG	8 cut(s)	49, 1105, 1200, 1236, 1356, 1384, 1476, 1716
BseJI	GATNNNNATC	2 cut(s)	579, 1104
BseLI	CCNNNNNNNGG	5 cut(s)	55, 307, 1136, 1137, 2393
BseMI	GCAATG	2 cut(s)	1008, 2100
BseMII	CTCAG	2 cut(s)	68, 429
BseNI	ACTGG	6 cut(s)	477, 1459, 1573, 2276, 2353, 2412
BseRI	GAGGAG	3 cut(s)	1311, 1941, 2309
BseSI	GKGCMC	1 cut(s)	1095
BseXI	GCAGC	8 cut(s)	1162, 1177, 1231, 1531, 1532, 1789, 2230, 2390
BseYI	CCCAGC	1 cut(s)	773
BsgI	GTGCAG	2 cut(s)	770, 2397
Bsh1236I	CGCG	2 cut(s)	533, 561
BshFI	GGCC	5 cut(s)	42, 137, 752, 1729, 2480
BsiHKAI	GWGCWC	1 cut(s)	1095
BsiHKCI	CYCGRG	1 cut(s)	2076
BsiSI	CCGG	2 cut(s)	1058, 2330
BslFI	GGGAC	5 cut(s)	217, 578, 911, 1056, 2058
BslI	CCNNNNNNNGG	5 cut(s)	55, 307, 1136, 1137, 2393
BsmAI	GTCTC	3 cut(s)	202, 1889, 2420
BsmBI	CGTCTC	1 cut(s)	202
BsmFI	GGGAC	5 cut(s)	217, 578, 911, 1056, 2058
BsmI	GAATGC	1 cut(s)	1063
BsnI	GGCC	5 cut(s)	42, 137, 752, 1729, 2480
BsoBI	CYCGRG	1 cut(s)	2076
Bsp1286I	GDGCHC	1 cut(s)	1095
Bsp13I	TCCGGA	1 cut(s)	1057
Bsp19I	CCATGG	2 cut(s)	1154, 2064
BspACI	CCGC	6 cut(s)	531, 561, 624, 693, 754, 1978
BspANI	GGCC	5 cut(s)	42, 137, 752, 1729, 2480
BspCNI	CTCAG	2 cut(s)	67, 428
BspEI	TCCGGA	1 cut(s)	1057
BspFNI	CGCG	2 cut(s)	533, 561
BspLI	GGNNCC	8 cut(s)	88, 112, 454, 593, 594, 1362, 2074, 2361
BspPI	GGATC	7 cut(s)	569, 896, 1594, 1733, 2047, 2055, 2450
BspTI	CTTAAG	1 cut(s)	698
BsrDI	GCAATG	2 cut(s)	1008, 2100
BsrI	ACTGG	6 cut(s)	477, 1459, 1573, 2276, 2353, 2412
BssECI	CCNNGG	6 cut(s)	200, 595, 1145, 1154, 1882, 2064
BssNAI	GTATAC	1 cut(s)	1514
BssSI	CACGAG	1 cut(s)	348
BssT1I	CCWWGG	4 cut(s)	1145, 1154, 1882, 2064
Bst1107I	GTATAC	1 cut(s)	1514
Bst2BI	CACGAG	1 cut(s)	348
Bst2UI	CCWGG	4 cut(s)	20, 201, 498, 597
Bst4CI	ACNGT	6 cut(s)	374, 426, 967, 1172, 1853, 2178
Bst6I	CTCTTC	2 cut(s)	2370, 2426
BstAFI	CTTAAG	1 cut(s)	698
BstAPI	GCANNNNNTGC	2 cut(s)	1165, 1541
BstBAI	YACGTR	2 cut(s)	1848, 2284
BstC8I	GCNNGC	3 cut(s)	170, 183, 754
BstDEI	CTNAG	4 cut(s)	54, 390, 415, 1901
BstDSI	CCRYGG	2 cut(s)	1154, 2064
BstEII	GGTNACC	1 cut(s)	2312
BstF5I	GGATG	8 cut(s)	49, 1105, 1200, 1236, 1356, 1384, 1476, 1716
BstFNI	CGCG	2 cut(s)	533, 561
BstMAI	GTCTC	3 cut(s)	202, 1889, 2420
BstMWI	GCNNNNNNNGC	6 cut(s)	178, 341, 1156, 1165, 1541, 2099
BstNI	CCWGG	4 cut(s)	20, 201, 498, 597
BstNSI	RCATGY	3 cut(s)	176, 185, 1520
BstPAI	GACNNNNGTC	1 cut(s)	693
BstPI	GGTNACC	1 cut(s)	2312
BstSCI	CCNGG	4 cut(s)	18, 199, 496, 595
BstSLI	GKGCMC	1 cut(s)	1095
BstSNI	TACGTA	1 cut(s)	2284
BstUI	CGCG	2 cut(s)	533, 561
BstV1I	GCAGC	8 cut(s)	1162, 1177, 1231, 1531, 1532, 1789, 2230, 2390
BstV2I	GAAGAC	4 cut(s)	860, 1244, 1455, 1917
BstX2I	RGATCY	2 cut(s)	574, 2039
BstYI	RGATCY	2 cut(s)	574, 2039
BstZ17I	GTATAC	1 cut(s)	1514
Bsu36I	CCTNAGG	1 cut(s)	54
BsuI	GTATCC	1 cut(s)	2337
BsuRI	GGCC	5 cut(s)	42, 137, 752, 1729, 2480
BtgI	CCRYGG	2 cut(s)	1154, 2064
BtsCI	GGATG	8 cut(s)	49, 1105, 1200, 1236, 1356, 1384, 1476, 1716
BtsI	GCAGTG	1 cut(s)	782
BtsIMutI	CAGTG	7 cut(s)	379, 484, 782, 1095, 1437, 1452, 2174
Cac8I	GCNNGC	3 cut(s)	170, 183, 754
Cfr13I	GGNCC	9 cut(s)	41, 273, 592, 751, 1077, 1184, 2072, 2342, 2478
CseI	GACGC	2 cut(s)	219, 986
Csp6I	GTAC	7 cut(s)	291, 430, 526, 600, 703, 1576, 1849
CviQI	GTAC	7 cut(s)	291, 430, 526, 600, 703, 1576, 1849
DdeI	CTNAG	4 cut(s)	54, 390, 415, 1901
DraIII	CACNNNGTG	1 cut(s)	1904
EaeI	YGGCCR	1 cut(s)	1727
Eam1104I	CTCTTC	2 cut(s)	2370, 2426
EarI	CTCTTC	2 cut(s)	2370, 2426
Eco105I	TACGTA	1 cut(s)	2284
Eco130I	CCWWGG	4 cut(s)	1145, 1154, 1882, 2064
Eco47I	GGWCC	6 cut(s)	273, 592, 1077, 1184, 2072, 2342
Eco57I	CTGAAG	3 cut(s)	113, 872, 1988
Eco81I	CCTNAGG	1 cut(s)	54
Eco88I	CYCGRG	1 cut(s)	2076
Eco91I	GGTNACC	1 cut(s)	2312
EcoO109I	RGGNCCY	4 cut(s)	273, 592, 1077, 2072
EcoO65I	GGTNACC	1 cut(s)	2312
EcoRI	GAATTC	1 cut(s)	1764
EcoRII	CCWGG	4 cut(s)	18, 199, 496, 595
EcoT14I	CCWWGG	4 cut(s)	1145, 1154, 1882, 2064
EcoT22I	ATGCAT	1 cut(s)	1315
ErhI	CCWWGG	4 cut(s)	1145, 1154, 1882, 2064
Esp3I	CGTCTC	1 cut(s)	202
FalI	AAGNNNNNCTT	4 cut(s)	621, 653, 870, 902
FaqI	GGGAC	5 cut(s)	217, 578, 911, 1056, 2058
FauI	CCCGC	1 cut(s)	761
FauNDI	CATATG	3 cut(s)	122, 235, 1525
FbaI	TGATCA	1 cut(s)	580
FblI	GTMKAC	1 cut(s)	1513
Fnu4HI	GCNGC	8 cut(s)	1151, 1191, 1220, 1521, 1545, 1778, 2219, 2379
FokI	GGATG	8 cut(s)	36, 1112, 1187, 1243, 1363, 1391, 1483, 1703
Fsp4HI	GCNGC	8 cut(s)	1151, 1191, 1220, 1521, 1545, 1778, 2219, 2379
FspBI	CTAG	4 cut(s)	116, 2036, 2139, 2438
GluI	GCNGC	8 cut(s)	1151, 1191, 1220, 1521, 1545, 1778, 2219, 2379
GsaI	CCCAGC	1 cut(s)	777
GsuI	CTGGAG	3 cut(s)	519, 1476, 2293
HaeIII	GGCC	5 cut(s)	42, 137, 752, 1729, 2480
HapII	CCGG	2 cut(s)	1058, 2330
HgaI	GACGC	2 cut(s)	219, 986
HindIII	AAGCTT	2 cut(s)	683, 1389
HinfI	GANTC	9 cut(s)	23, 411, 1421, 1888, 1972, 2227, 2275, 2413, 2434
HpaII	CCGG	2 cut(s)	1058, 2330
HphI	GGTGA	7 cut(s)	854, 1198, 1628, 1748, 1954, 2306, 2488
Hpy166II	GTNNAC	8 cut(s)	355, 528, 976, 1093, 1514, 1856, 2017, 2144
Hpy188I	TCNGA	7 cut(s)	800, 810, 829, 960, 1665, 2243, 2504
Hpy8I	GTNNAC	8 cut(s)	355, 528, 976, 1093, 1514, 1856, 2017, 2144
HpyAV	CCTTC	9 cut(s)	127, 155, 466, 863, 1727, 1766, 2063, 2238, 2302
HpyCH4III	ACNGT	6 cut(s)	374, 426, 967, 1172, 1853, 2178
HpyCH4IV	ACGT	4 cut(s)	1045, 1084, 1847, 2283
HpyF10VI	GCNNNNNNNGC	6 cut(s)	178, 341, 1156, 1165, 1541, 2099
HpyF3I	CTNAG	4 cut(s)	54, 390, 415, 1901
HpySE526I	ACGT	4 cut(s)	1045, 1084, 1847, 2283
KflI	GGGWCCC	1 cut(s)	592
Kpn2I	TCCGGA	1 cut(s)	1057
Ksp22I	TGATCA	1 cut(s)	580
LmnI	GCTCC	6 cut(s)	116, 310, 500, 1060, 1927, 2359
Lsp1109I	GCAGC	8 cut(s)	1162, 1177, 1231, 1531, 1532, 1789, 2230, 2390
LweI	GCATC	5 cut(s)	447, 637, 727, 973, 1300
MaeI	CTAG	4 cut(s)	116, 2036, 2139, 2438
MaeII	ACGT	4 cut(s)	1045, 1084, 1847, 2283
MaeIII	GTNAC	8 cut(s)	238, 631, 780, 861, 1109, 2172, 2296, 2312
MboII	GAAGA	9 cut(s)	106, 865, 1244, 1460, 1922, 1981, 2216, 2357, 2443
MfeI	CAATTG	2 cut(s)	186, 1416
MflI	RGATCY	2 cut(s)	574, 2039
MhlI	GDGCHC	1 cut(s)	1095
MlsI	TGGCCA	1 cut(s)	1729
MluNI	TGGCCA	1 cut(s)	1729
MlyI	GAGTC	4 cut(s)	2236, 2284, 2422, 2443
MmeI	TCCRAC	5 cut(s)	388, 929, 1000, 1813, 2369
Mox20I	TGGCCA	1 cut(s)	1729
Mph1103I	ATGCAT	1 cut(s)	1315
MroI	TCCGGA	1 cut(s)	1057
MroXI	GAANNNNTTC	2 cut(s)	69, 144
MscI	TGGCCA	1 cut(s)	1729
MseI	TTAA	8 cut(s)	699, 915, 924, 996, 1316, 1934, 2334, 2454
MslI	CAYNNNNRTG	5 cut(s)	321, 375, 1098, 1721, 2303
Msp20I	TGGCCA	1 cut(s)	1729
MspA1I	CMGCKG	1 cut(s)	1190
MspCI	CTTAAG	1 cut(s)	698
MspI	CCGG	2 cut(s)	1058, 2330
MspR9I	CCNGG	4 cut(s)	20, 201, 498, 597
MunI	CAATTG	2 cut(s)	186, 1416
Mva1269I	GAATGC	1 cut(s)	1063
MvaI	CCWGG	4 cut(s)	20, 201, 498, 597
MvnI	CGCG	2 cut(s)	533, 561
MwoI	GCNNNNNNNGC	6 cut(s)	178, 341, 1156, 1165, 1541, 2099
NcoI	CCATGG	2 cut(s)	1154, 2064
NdeI	CATATG	3 cut(s)	122, 235, 1525
NlaIV	GGNNCC	8 cut(s)	88, 112, 454, 593, 594, 1362, 2074, 2361
NmeAIII	GCCGAG	1 cut(s)	2397
NmuCI	GTSAC	5 cut(s)	780, 861, 2172, 2296, 2312
NsiI	ATGCAT	1 cut(s)	1315
NspI	RCATGY	3 cut(s)	176, 185, 1520
PaeI	GCATGC	1 cut(s)	185
PctI	GAATGC	1 cut(s)	1063
PdmI	GAANNNNTTC	2 cut(s)	69, 144
PfeI	GAWTC	5 cut(s)	23, 411, 1421, 1888, 1972
PflFI	GACNNNGTC	1 cut(s)	859
PkrI	GCNGC	8 cut(s)	1152, 1192, 1221, 1522, 1546, 1779, 2220, 2380
PleI	GAGTC	4 cut(s)	2235, 2283, 2421, 2442
PpsI	GAGTC	4 cut(s)	2235, 2283, 2421, 2442
Ppu21I	YACGTR	2 cut(s)	1848, 2284
PpuMI	RGGWCCY	4 cut(s)	273, 592, 1077, 2072
PshAI	GACNNNNGTC	1 cut(s)	693
PshBI	ATTAAT	2 cut(s)	1316, 2454
PsiI	TTATAA	1 cut(s)	555
Psp5II	RGGWCCY	4 cut(s)	273, 592, 1077, 2072
Psp6I	CCWGG	4 cut(s)	18, 199, 496, 595
PspEI	GGTNACC	1 cut(s)	2312
PspFI	CCCAGC	1 cut(s)	773
PspGI	CCWGG	4 cut(s)	18, 199, 496, 595
PspN4I	GGNNCC	8 cut(s)	88, 112, 454, 593, 594, 1362, 2074, 2361
PspPI	GGNCC	9 cut(s)	41, 273, 592, 751, 1077, 1184, 2072, 2342, 2478
PspPPI	RGGWCCY	4 cut(s)	273, 592, 1077, 2072
PsuI	RGATCY	2 cut(s)	574, 2039
PsyI	GACNNNGTC	1 cut(s)	859
PvuII	CAGCTG	1 cut(s)	1190
RsaI	GTAC	7 cut(s)	292, 431, 527, 601, 704, 1577, 1850
RsaNI	GTAC	7 cut(s)	291, 430, 526, 600, 703, 1576, 1849
RseI	CAYNNNNRTG	5 cut(s)	321, 375, 1098, 1721, 2303
SaqAI	TTAA	8 cut(s)	699, 915, 924, 996, 1316, 1934, 2334, 2454
SatI	GCNGC	8 cut(s)	1151, 1191, 1220, 1521, 1545, 1778, 2219, 2379
Sau96I	GGNCC	9 cut(s)	41, 273, 592, 751, 1077, 1184, 2072, 2342, 2478
ScaI	AGTACT	1 cut(s)	1577
SchI	GAGTC	4 cut(s)	2236, 2284, 2422, 2443
ScrFI	CCNGG	4 cut(s)	20, 201, 498, 597
SduI	GDGCHC	1 cut(s)	1095
SfaNI	GCATC	5 cut(s)	447, 637, 727, 973, 1300
SinI	GGWCC	6 cut(s)	273, 592, 1077, 1184, 2072, 2342
SmiMI	CAYNNNNRTG	5 cut(s)	321, 375, 1098, 1721, 2303
SmlI	CTYRAG	4 cut(s)	698, 1369, 1953, 2321
SmoI	CTYRAG	4 cut(s)	698, 1369, 1953, 2321
SnaBI	TACGTA	1 cut(s)	2284
SphI	GCATGC	1 cut(s)	185
SsiI	CCGC	6 cut(s)	531, 561, 624, 693, 754, 1978
SspI	AATATT	1 cut(s)	220
SspMI	CTAG	4 cut(s)	116, 2036, 2139, 2438
StyD4I	CCNGG	4 cut(s)	18, 199, 496, 595
StyI	CCWWGG	4 cut(s)	1145, 1154, 1882, 2064
TaaI	ACNGT	6 cut(s)	374, 426, 967, 1172, 1853, 2178
TaiI	ACGT	4 cut(s)	1048, 1087, 1850, 2286
TaqI	TCGA	2 cut(s)	1124, 2202
TatI	WGTACW	4 cut(s)	290, 429, 525, 1575
TfiI	GAWTC	5 cut(s)	23, 411, 1421, 1888, 1972
Tru1I	TTAA	8 cut(s)	699, 915, 924, 996, 1316, 1934, 2334, 2454
Tru9I	TTAA	8 cut(s)	699, 915, 924, 996, 1316, 1934, 2334, 2454
TscAI	CASTG	7 cut(s)	379, 484, 789, 1095, 1437, 1459, 2181
TseFI	GTSAC	5 cut(s)	780, 861, 2172, 2296, 2312
TseI	GCWGC	8 cut(s)	1150, 1190, 1219, 1520, 1544, 1777, 2218, 2378
Tsp45I	GTSAC	5 cut(s)	780, 861, 2172, 2296, 2312
TspDTI	ATGAA	7 cut(s)	813, 1487, 1818, 1985, 2037, 2307, 2321
TspGWI	ACGGA	2 cut(s)	1400, 1529
TspRI	CASTG	7 cut(s)	379, 484, 789, 1095, 1437, 1459, 2181
Tth111I	GACNNNGTC	1 cut(s)	859
Vha464I	CTTAAG	1 cut(s)	698
VneI	GTGCAC	1 cut(s)	1091
VpaK11BI	GGWCC	6 cut(s)	273, 592, 1077, 1184, 2072, 2342
VspI	ATTAAT	2 cut(s)	1316, 2454
XapI	RAATTY	4 cut(s)	1332, 1341, 1764, 1870
XceI	RCATGY	3 cut(s)	176, 185, 1520
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1152, 1580
XmiI	GTMKAC	1 cut(s)	1513
XmnI	GAANNNNTTC	2 cut(s)	69, 144
XspI	CTAG	4 cut(s)	116, 2036, 2139, 2438
ZrmI	AGTACT	1 cut(s)	1577
Zsp2I	ATGCAT	1 cut(s)	1315

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.