Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002748.1

Orthogroup ID

OG0001557

Physical Location & Seq

Genomic Coordinates Forward (+)

130747 .. 134746

Gene Structure 4000 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002748.1_g000027.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1857 bp

atgcataccaatgacgaagacgctcgacgtttctttaaggactcttcagttcaatttttactctgccctcgatcatcagtccaaagctgggggaaaaagatggaagctggaatagtctatacccatcatcagaaaactgtaattgtggacgctgatgctggacatattaaaagaaagatcattgcatttgttggaggtcttgacttgtgcttgggacgttatgatactccggagcattctatatttaggaccttacgttcagtgcacaaggatgacaatcgtaaccctactttctcgaaacccgttattgggtgtccaaggcagccatggcatgatttgcacagtaaaattgatggtccagctgcttatgacatcctcaccaattttgagcagcgttgggggatggcttcaaaaccacatggtcttcacaaactaaaagaacgaggacttcaaaaactgaaattacgaggagatgatgatgatgcattactcaagattgagaaaattcctgaaattcttgggatgacagaggttcctcgcttgagtgaggatgataaagaagcttgggatattcaggttttccgttcaattgattcccattcagtgcaaggatttcccgaagacactggagaagctacaaggatgaaccttgtttgtgggaaaaatgtgctgatagacatgagtatacatgcagcatatgtaaaagcaatccgtgctgctcaacattttatttacatagagaaccagtactttattggatcatcatataattggaagtcaaacattggtgatagtgatacagtgtcaataatgtaccgctacctgattaccttccatagcgataagttgcttgttgttgctggtttcttcacttttattgatgtcttgatttgtgatttcgcttttgcaacaagaatacagtgcaaacaatttgataccgatggaaatcgctctgaaaatagcaaacaaaatcaaagcaaacgagaagttttctgtgcaaacaatttgataccgatggaaatcgctctgaaaatagcaaacaaaatcaaagcaaatgagaagttttctgtatatattgtcatccccatgtggccagaaggtgatcccaatgatatgccccttcaaagaattctcctttggcagcataaaacaatgcaaatgatgtatgaaatcatttacaaggctctaaaggaggttgggctcgaaaataagaactgtccacaagactatttgaatttcttttgcctcggaaatcgtgagaaaccaagtggagatgctgcaaataatttaagtgcagcaaacactcccgaagtactcactcagaatagtcggcgatttatgatttatgtccattctaaaggaatgatagtggatgatgaatatgttatagtgggatctgcaaatatcaatcagcgatccatggaaggtctccgagatactgaaatagcaatgggggcttatcagcctcatcatacttgggcgagaaaactctcgagtccacacggaaagatatatggatacagaatgtcactgtgggcagagcatttaggacttgttgaagaatgtttcaatcagccagagagtcttgaatgtgttcaaagggtaaggtctttgggtgagcagaactggagtcaatacttggacgacgtagtcacagaaatgaagggtcacctcctcaagtatccggttgaagttggtccaacgggcacggtggggcctcttccagggtgtccaacatttccagacgttggtggcaatatattggggagtctcggcgacataaaagtagtgaagaatctgcgtatcagtagcagtgggaggacaatatcgcttagaggcgccatcatcaccacctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005488 GO:0005543 GO:0005546 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005886 GO:0005911 GO:0006629 GO:0006643 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008289 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009790 GO:0009791 GO:0009793 GO:0009814 GO:0009816 GO:0009987 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0022414 GO:0022626 GO:0030054 GO:0032501 GO:0032502 GO:0032991 GO:0035091 GO:0042221 GO:0042578 GO:0042742 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0045087 GO:0046686 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0061458 GO:0071704 GO:0071944 GO:0098542 GO:1901981 GO:1902936 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

618

Amino Acids

70.05

Weight (kDa)

7.06

Isoelectric Point (pI)

39.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11830 AT4G11830 AT4G11830 AT4G11830 AT4G11840 AT4G11840 AT4G11850
fragaria_vesca	FvH4_5g01274 FvH4_5g01290 FvH4_5g01290 FvH4_5g01290
malus_domestica	MD04G1069600.v1.1
prunus_persica	Prupe.5G088300_v2.0.a1 Prupe.5G088300_v2.0.a1
pyrus_communis	pycom04g06330
rosa_chinensis	RchiOBHm_Chr4g0413221 RchiOBHm_Chr7g0199651 RchiOBHm_Chr7g0199691 RchiOBHm_Chr7g0199711 RchiOBHm_Chr7g0199731
rosa_laevigata	RLG00000003775 RLG00000003776 RLG00000003777 RLG00000003778 RLG00000003779
rosa_multiflora	Rmu_co8400099.1_g000001 Rmu_sc0002748.1_g000025 Rmu_sc0002748.1_g000027 Rmu_sc0002748.1_g000028 Rmu_sc0009191.1_g000004
rosa_roxburghii	Rroxscaffold_3G00256480 Rroxscaffold_3G00256490 Rroxscaffold_3G00256520
rosa_rugosa	Rorug07G0055600 Rorug07G0055800 Rorug07G0055900
rosa_samantha	Rh7AG180700 Rh7AG181000 Rh7AG181200 Rh7BG183600 Rh7BG183900 Rh7BG184100 Rh7CG190400 Rh7CG190600 Rh7CG190700 Rh7DG183600 Rh7DG183800
rosa_wichuraiana	Rw7G015870 Rw7G015880 Rw7G015890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1649
AccB1I	GGYRCC	1 cut(s)	1838
AccB7I	CCANNNNNTGG	1 cut(s)	1748
AccI	GTMKAC	1 cut(s)	685
AccIII	TCCGGA	1 cut(s)	229
AciI	CCGC	1 cut(s)	817
AclWI	GGATC	4 cut(s)	766, 1097, 1402, 1410
AcoI	YGGCCR	1 cut(s)	1091
AcsI	RAATTY	4 cut(s)	504, 513, 1128, 1234
AcuI	CTGAAG	1 cut(s)	30
AcyI	GRCGYC	1 cut(s)	1839
AfaI	GTAC	3 cut(s)	749, 815, 1314
AfiI	CCNNNNNNNGG	5 cut(s)	88, 308, 309, 1724, 1748
AjnI	CCWGG	1 cut(s)	1723
AjuI	GAANNNNNNNTTGG	2 cut(s)	1120, 1152
AloI	GAACNNNNNNTCC	2 cut(s)	241, 273
AluBI	AGCT	5 cut(s)	87, 107, 362, 563, 635
AluI	AGCT	5 cut(s)	87, 107, 362, 563, 635
Alw21I	GWGCWC	1 cut(s)	267
Alw26I	GTCTC	2 cut(s)	1433, 1775
Alw44I	GTGCAC	1 cut(s)	263
AlwI	GGATC	4 cut(s)	766, 1097, 1402, 1410
Ama87I	CYCGRG	1 cut(s)	1492
Aor13HI	TCCGGA	1 cut(s)	229
AoxI	GGCC	2 cut(s)	1091, 1715
ApaLI	GTGCAC	1 cut(s)	263
ApeKI	GCWGC	8 cut(s)	322, 362, 391, 692, 716, 1141, 1277, 1295
ApoI	RAATTY	4 cut(s)	504, 513, 1128, 1234
Asp700I	GAANNNNTTC	1 cut(s)	1593
AspLEI	GCGC	1 cut(s)	1841
AspS9I	GGNCC	4 cut(s)	249, 356, 1697, 1715
AsuHPI	GGTGA	6 cut(s)	370, 800, 1112, 1628, 1661, 1840
AvaI	CYCGRG	1 cut(s)	1492
AvaII	GGWCC	3 cut(s)	249, 356, 1697
BaeGI	GKGCMC	2 cut(s)	267, 1709
BalI	TGGCCA	1 cut(s)	1093
BanI	GGYRCC	1 cut(s)	1838
BanII	GRGCYC	1 cut(s)	1203
BbsI	GAAGAC	3 cut(s)	24, 416, 627
Bbv12I	GWGCWC	1 cut(s)	267
BbvI	GCAGC	8 cut(s)	334, 349, 403, 703, 704, 1153, 1264, 1307
BccI	CCATC	7 cut(s)	94, 132, 347, 397, 935, 1009, 1850
BciT130I	CCWGG	1 cut(s)	1725
BciVI	GTATCC	2 cut(s)	1511, 1692
BcoDI	GTCTC	2 cut(s)	1433, 1775
BfoI	RGCGCY	1 cut(s)	1842
BfuI	GTATCC	2 cut(s)	1511, 1692
BisI	GCNGC	8 cut(s)	323, 363, 392, 693, 717, 1142, 1278, 1296
BlsI	GCNGC	8 cut(s)	324, 364, 393, 694, 718, 1143, 1279, 1297
BmcAI	AGTACT	2 cut(s)	749, 1314
Bme1390I	CCNGG	1 cut(s)	1725
Bme18I	GGWCC	3 cut(s)	249, 356, 1697
BmeT110I	CYCGRG	1 cut(s)	1492
BmgT120I	GGNCC	4 cut(s)	249, 356, 1697, 1715
BmiI	GGNNCC	3 cut(s)	534, 1716, 1840
BmrFI	CCNGG	1 cut(s)	1725
BmsI	GCATC	3 cut(s)	145, 472, 1264
BpiI	GAAGAC	3 cut(s)	24, 416, 627
BpmI	CTGGAG	2 cut(s)	648, 1648
BpuEI	CTTGAG	3 cut(s)	476, 562, 1661
BsaBI	GATNNNNATC	3 cut(s)	276, 945, 1019
BsaHI	GRCGYC	1 cut(s)	1839
BsaI	GGTCTC	1 cut(s)	1433
BsaJI	CCNNGG	5 cut(s)	317, 326, 1246, 1419, 1724
BsaWI	WCCGGW	2 cut(s)	229, 1684
Bsc4I	CCNNNNNNNGG	5 cut(s)	88, 308, 309, 1724, 1748
Bse1I	ACTGG	3 cut(s)	631, 745, 1631
Bse3DI	GCAATG	2 cut(s)	180, 1455
Bse8I	GATNNNNATC	3 cut(s)	276, 945, 1019
BseAI	TCCGGA	1 cut(s)	229
BseBI	CCWGG	1 cut(s)	1725
BseDI	CCNNGG	5 cut(s)	317, 326, 1246, 1419, 1724
BseGI	GGATG	8 cut(s)	277, 372, 408, 528, 556, 648, 1080, 1378
BseJI	GATNNNNATC	3 cut(s)	276, 945, 1019
BseLI	CCNNNNNNNGG	5 cut(s)	88, 308, 309, 1724, 1748
BseMI	GCAATG	2 cut(s)	180, 1455
BseMII	CTCAG	1 cut(s)	1334
BseNI	ACTGG	3 cut(s)	631, 745, 1631
BseRI	GAGGAG	2 cut(s)	483, 1664
BseSI	GKGCMC	2 cut(s)	267, 1709
BseXI	GCAGC	8 cut(s)	334, 349, 403, 703, 704, 1153, 1264, 1307
BseYI	CCCAGC	1 cut(s)	87
BsgI	GTGCAG	1 cut(s)	1314
BshFI	GGCC	2 cut(s)	1093, 1717
BshNI	GGYRCC	1 cut(s)	1838
BsiHKAI	GWGCWC	1 cut(s)	267
BsiHKCI	CYCGRG	1 cut(s)	1492
BsiSI	CCGG	2 cut(s)	230, 1685
BslFI	GGGAC	1 cut(s)	228
BslI	CCNNNNNNNGG	5 cut(s)	88, 308, 309, 1724, 1748
BsmAI	GTCTC	2 cut(s)	1433, 1775
BsmFI	GGGAC	1 cut(s)	228
BsmI	GAATGC	1 cut(s)	235
BsnI	GGCC	2 cut(s)	1093, 1717
Bso31I	GGTCTC	1 cut(s)	1433
BsoBI	CYCGRG	1 cut(s)	1492
Bsp1286I	GDGCHC	3 cut(s)	267, 1203, 1709
Bsp13I	TCCGGA	1 cut(s)	229
Bsp143I	GATC	6 cut(s)	71, 177, 758, 1102, 1394, 1415
Bsp19I	CCATGG	2 cut(s)	326, 1419
BspACI	CCGC	1 cut(s)	817
BspANI	GGCC	2 cut(s)	1093, 1717
BspCNI	CTCAG	1 cut(s)	1333
BspEI	TCCGGA	1 cut(s)	229
BspLI	GGNNCC	3 cut(s)	534, 1716, 1840
BspPI	GGATC	4 cut(s)	766, 1097, 1402, 1410
BspT107I	GGYRCC	1 cut(s)	1838
BspTNI	GGTCTC	1 cut(s)	1433
BsrDI	GCAATG	2 cut(s)	180, 1455
BsrI	ACTGG	3 cut(s)	631, 745, 1631
BssECI	CCNNGG	5 cut(s)	317, 326, 1246, 1419, 1724
BssMI	GATC	6 cut(s)	71, 177, 758, 1102, 1394, 1415
BssNAI	GTATAC	1 cut(s)	686
BssNI	GRCGYC	1 cut(s)	1839
BssT1I	CCWWGG	3 cut(s)	317, 326, 1419
Bst1107I	GTATAC	1 cut(s)	686
Bst2UI	CCWGG	1 cut(s)	1725
Bst4CI	ACNGT	7 cut(s)	139, 344, 802, 921, 1217, 1533, 1711
Bst6I	CTCTTC	2 cut(s)	49, 1725
BstACI	GRCGYC	1 cut(s)	1839
BstAPI	GCANNNNNTGC	2 cut(s)	337, 713
BstDEI	CTNAG	2 cut(s)	1320, 1832
BstDSI	CCRYGG	2 cut(s)	326, 1419
BstEII	GGTNACC	1 cut(s)	1667
BstENI	CCTNNNNNAGG	1 cut(s)	1722
BstF5I	GGATG	8 cut(s)	277, 372, 408, 528, 556, 648, 1080, 1378
BstH2I	RGCGCY	1 cut(s)	1842
BstHHI	GCGC	1 cut(s)	1841
BstKTI	GATC	6 cut(s)	74, 180, 761, 1105, 1397, 1418
BstMAI	GTCTC	2 cut(s)	1433, 1775
BstMBI	GATC	6 cut(s)	71, 177, 758, 1102, 1394, 1415
BstMWI	GCNNNNNNNGC	4 cut(s)	328, 337, 713, 1454
BstNI	CCWGG	1 cut(s)	1725
BstNSI	RCATGY	1 cut(s)	692
BstPI	GGTNACC	1 cut(s)	1667
BstSCI	CCNGG	1 cut(s)	1723
BstSLI	GKGCMC	2 cut(s)	267, 1709
BstV1I	GCAGC	8 cut(s)	334, 349, 403, 703, 704, 1153, 1264, 1307
BstV2I	GAAGAC	3 cut(s)	24, 416, 627
BstX2I	RGATCY	1 cut(s)	1394
BstYI	RGATCY	1 cut(s)	1394
BstZ17I	GTATAC	1 cut(s)	686
BsuI	GTATCC	2 cut(s)	1511, 1692
BsuRI	GGCC	2 cut(s)	1093, 1717
BtgI	CCRYGG	2 cut(s)	326, 1419
BtsCI	GGATG	8 cut(s)	277, 372, 408, 528, 556, 648, 1080, 1378
BtsI	GCAGTG	1 cut(s)	1819
BtsIMutI	CAGTG	7 cut(s)	267, 609, 624, 807, 926, 1529, 1819
CfoI	GCGC	1 cut(s)	1841
Cfr13I	GGNCC	4 cut(s)	249, 356, 1697, 1715
CseI	GACGC	2 cut(s)	29, 158
Csp6I	GTAC	3 cut(s)	748, 814, 1313
CviAII	CATG	7 cut(s)	327, 332, 419, 679, 689, 1087, 1420
CviQI	GTAC	3 cut(s)	748, 814, 1313
DdeI	CTNAG	2 cut(s)	1320, 1832
DinI	GGCGCC	1 cut(s)	1840
DpnI	GATC	6 cut(s)	73, 179, 760, 1104, 1396, 1417
DpnII	GATC	6 cut(s)	71, 177, 758, 1102, 1394, 1415
DrdI	GACNNNNNNGTC	1 cut(s)	1649
DseDI	GACNNNNNNGTC	1 cut(s)	1649
EaeI	YGGCCR	1 cut(s)	1091
Eam1104I	CTCTTC	2 cut(s)	49, 1725
EarI	CTCTTC	2 cut(s)	49, 1725
Eco130I	CCWWGG	3 cut(s)	317, 326, 1419
Eco24I	GRGCYC	1 cut(s)	1203
Eco31I	GGTCTC	1 cut(s)	1433
Eco47I	GGWCC	3 cut(s)	249, 356, 1697
Eco57I	CTGAAG	1 cut(s)	30
Eco88I	CYCGRG	1 cut(s)	1492
Eco91I	GGTNACC	1 cut(s)	1667
EcoNI	CCTNNNNNAGG	1 cut(s)	1722
EcoO109I	RGGNCCY	2 cut(s)	249, 1715
EcoO65I	GGTNACC	1 cut(s)	1667
EcoRI	GAATTC	1 cut(s)	1128
EcoRII	CCWGG	1 cut(s)	1723
EcoT14I	CCWWGG	3 cut(s)	317, 326, 1419
EcoT22I	ATGCAT	2 cut(s)	6, 487
EcoT38I	GRGCYC	1 cut(s)	1203
EgeI	GGCGCC	1 cut(s)	1840
EheI	GGCGCC	1 cut(s)	1840
ErhI	CCWWGG	3 cut(s)	317, 326, 1419
FaeI	CATG	7 cut(s)	330, 335, 422, 682, 692, 1090, 1423
FaqI	GGGAC	1 cut(s)	228
FatI	CATG	7 cut(s)	326, 331, 418, 678, 688, 1086, 1419
FauNDI	CATATG	1 cut(s)	697
FblI	GTMKAC	1 cut(s)	685
Fnu4HI	GCNGC	8 cut(s)	323, 363, 392, 693, 717, 1142, 1278, 1296
FokI	GGATG	8 cut(s)	284, 359, 415, 535, 563, 655, 1067, 1385
FriOI	GRGCYC	1 cut(s)	1203
Fsp4HI	GCNGC	8 cut(s)	323, 363, 392, 693, 717, 1142, 1278, 1296
GlaI	GCGC	1 cut(s)	1840
GluI	GCNGC	8 cut(s)	323, 363, 392, 693, 717, 1142, 1278, 1296
GsaI	CCCAGC	1 cut(s)	91
GsuI	CTGGAG	2 cut(s)	648, 1648
HaeII	RGCGCY	1 cut(s)	1842
HaeIII	GGCC	2 cut(s)	1093, 1717
HapII	CCGG	2 cut(s)	230, 1685
HgaI	GACGC	2 cut(s)	29, 158
HhaI	GCGC	1 cut(s)	1841
Hin1I	GRCGYC	1 cut(s)	1839
Hin1II	CATG	7 cut(s)	330, 335, 422, 682, 692, 1090, 1423
Hin6I	GCGC	1 cut(s)	1839
HinP1I	GCGC	1 cut(s)	1839
HindIII	AAGCTT	1 cut(s)	561
HinfI	GANTC	7 cut(s)	41, 593, 1495, 1582, 1630, 1768, 1795
HpaII	CCGG	2 cut(s)	230, 1685
HphI	GGTGA	6 cut(s)	370, 800, 1112, 1628, 1661, 1840
Hpy166II	GTNNAC	5 cut(s)	148, 265, 686, 1220, 1499
Hpy188I	TCNGA	6 cut(s)	132, 955, 1029, 1250, 1323, 1433
Hpy8I	GTNNAC	5 cut(s)	148, 265, 686, 1220, 1499
Hpy99I	CGWCG	2 cut(s)	30, 1649
HpyAV	CCTTC	5 cut(s)	841, 1091, 1130, 1418, 1657
HpyCH4III	ACNGT	7 cut(s)	139, 344, 802, 921, 1217, 1533, 1711
HpyCH4IV	ACGT	5 cut(s)	28, 217, 256, 1647, 1746
HpyF10VI	GCNNNNNNNGC	4 cut(s)	328, 337, 713, 1454
HpyF3I	CTNAG	2 cut(s)	1320, 1832
HpySE526I	ACGT	5 cut(s)	28, 217, 256, 1647, 1746
Hsp92I	GRCGYC	1 cut(s)	1839
Hsp92II	CATG	7 cut(s)	330, 335, 422, 682, 692, 1090, 1423
HspAI	GCGC	1 cut(s)	1839
KasI	GGCGCC	1 cut(s)	1838
Kpn2I	TCCGGA	1 cut(s)	229
Kzo9I	GATC	6 cut(s)	71, 177, 758, 1102, 1394, 1415
LmnI	GCTCC	1 cut(s)	232
Lsp1109I	GCAGC	8 cut(s)	334, 349, 403, 703, 704, 1153, 1264, 1307
LweI	GCATC	3 cut(s)	145, 472, 1264
MaeII	ACGT	5 cut(s)	28, 217, 256, 1647, 1746
MaeIII	GTNAC	4 cut(s)	281, 1527, 1651, 1667
MalI	GATC	6 cut(s)	73, 179, 760, 1104, 1396, 1417
MboI	GATC	6 cut(s)	71, 177, 758, 1102, 1394, 1415
MboII	GAAGA	8 cut(s)	29, 36, 416, 632, 859, 1571, 1712, 1804
MfeI	CAATTG	1 cut(s)	588
MflI	RGATCY	1 cut(s)	1394
MhlI	GDGCHC	3 cut(s)	267, 1203, 1709
MlsI	TGGCCA	1 cut(s)	1093
MluNI	TGGCCA	1 cut(s)	1093
Mly113I	GGCGCC	1 cut(s)	1839
MlyI	GAGTC	5 cut(s)	35, 1504, 1591, 1639, 1777
MmeI	TCCRAC	3 cut(s)	172, 1724, 1757
Mox20I	TGGCCA	1 cut(s)	1093
Mph1103I	ATGCAT	2 cut(s)	6, 487
MroI	TCCGGA	1 cut(s)	229
MroXI	GAANNNNTTC	1 cut(s)	1593
MscI	TGGCCA	1 cut(s)	1093
MseI	TTAA	3 cut(s)	36, 168, 1289
MslI	CAYNNNNRTG	4 cut(s)	9, 270, 1085, 1658
Msp20I	TGGCCA	1 cut(s)	1093
MspA1I	CMGCKG	1 cut(s)	362
MspI	CCGG	2 cut(s)	230, 1685
MspR9I	CCNGG	1 cut(s)	1725
MunI	CAATTG	1 cut(s)	588
Mva1269I	GAATGC	1 cut(s)	235
MvaI	CCWGG	1 cut(s)	1725
MwoI	GCNNNNNNNGC	4 cut(s)	328, 337, 713, 1454
NarI	GGCGCC	1 cut(s)	1839
NcoI	CCATGG	2 cut(s)	326, 1419
NdeI	CATATG	1 cut(s)	697
NdeII	GATC	6 cut(s)	71, 177, 758, 1102, 1394, 1415
NlaIII	CATG	7 cut(s)	330, 335, 422, 682, 692, 1090, 1423
NlaIV	GGNNCC	3 cut(s)	534, 1716, 1840
NmeAIII	GCCGAG	1 cut(s)	1752
NmuCI	GTSAC	3 cut(s)	1527, 1651, 1667
NsiI	ATGCAT	2 cut(s)	6, 487
NspI	RCATGY	1 cut(s)	692
PaeR7I	CTCGAG	1 cut(s)	1492
PctI	GAATGC	1 cut(s)	235
PdmI	GAANNNNTTC	1 cut(s)	1593
PfeI	GAWTC	2 cut(s)	593, 1795
PflFI	GACNNNGTC	1 cut(s)	1649
PflMI	CCANNNNNTGG	1 cut(s)	1748
PkrI	GCNGC	8 cut(s)	324, 364, 393, 694, 718, 1143, 1279, 1297
PleI	GAGTC	5 cut(s)	35, 1503, 1590, 1638, 1776
PluTI	GGCGCC	1 cut(s)	1842
PpsI	GAGTC	5 cut(s)	35, 1503, 1590, 1638, 1776
PpuMI	RGGWCCY	1 cut(s)	249
Psp5II	RGGWCCY	1 cut(s)	249
Psp6I	CCWGG	1 cut(s)	1723
PspEI	GGTNACC	1 cut(s)	1667
PspFI	CCCAGC	1 cut(s)	87
PspGI	CCWGG	1 cut(s)	1723
PspN4I	GGNNCC	3 cut(s)	534, 1716, 1840
PspPI	GGNCC	4 cut(s)	249, 356, 1697, 1715
PspPPI	RGGWCCY	1 cut(s)	249
PsuI	RGATCY	1 cut(s)	1394
PsyI	GACNNNGTC	1 cut(s)	1649
PvuII	CAGCTG	1 cut(s)	362
RsaI	GTAC	3 cut(s)	749, 815, 1314
RsaNI	GTAC	3 cut(s)	748, 814, 1313
RseI	CAYNNNNRTG	4 cut(s)	9, 270, 1085, 1658
SaqAI	TTAA	3 cut(s)	36, 168, 1289
SatI	GCNGC	8 cut(s)	323, 363, 392, 693, 717, 1142, 1278, 1296
Sau3AI	GATC	6 cut(s)	71, 177, 758, 1102, 1394, 1415
Sau96I	GGNCC	4 cut(s)	249, 356, 1697, 1715
ScaI	AGTACT	2 cut(s)	749, 1314
SchI	GAGTC	5 cut(s)	35, 1504, 1591, 1639, 1777
ScrFI	CCNGG	1 cut(s)	1725
SduI	GDGCHC	3 cut(s)	267, 1203, 1709
SfaNI	GCATC	3 cut(s)	145, 472, 1264
SfoI	GGCGCC	1 cut(s)	1840
Sfr274I	CTCGAG	1 cut(s)	1492
SinI	GGWCC	3 cut(s)	249, 356, 1697
SlaI	CTCGAG	1 cut(s)	1492
SmiMI	CAYNNNNRTG	4 cut(s)	9, 270, 1085, 1658
SmlI	CTYRAG	4 cut(s)	491, 541, 1492, 1676
SmoI	CTYRAG	4 cut(s)	491, 541, 1492, 1676
SsiI	CCGC	1 cut(s)	817
SspDI	GGCGCC	1 cut(s)	1838
StyD4I	CCNGG	1 cut(s)	1723
StyI	CCWWGG	3 cut(s)	317, 326, 1419
TaaI	ACNGT	7 cut(s)	139, 344, 802, 921, 1217, 1533, 1711
TaiI	ACGT	5 cut(s)	31, 220, 259, 1650, 1749
TaqI	TCGA	5 cut(s)	25, 70, 296, 1203, 1493
TatI	WGTACW	2 cut(s)	747, 1312
TfiI	GAWTC	2 cut(s)	593, 1795
Tru1I	TTAA	3 cut(s)	36, 168, 1289
Tru9I	TTAA	3 cut(s)	36, 168, 1289
TscAI	CASTG	7 cut(s)	267, 609, 631, 807, 926, 1536, 1819
TseFI	GTSAC	3 cut(s)	1527, 1651, 1667
TseI	GCWGC	8 cut(s)	322, 362, 391, 692, 716, 1141, 1277, 1295
Tsp45I	GTSAC	3 cut(s)	1527, 1651, 1667
TspDTI	ATGAA	4 cut(s)	659, 1182, 1392, 1676
TspGWI	ACGGA	3 cut(s)	572, 701, 1518
TspRI	CASTG	7 cut(s)	267, 609, 631, 807, 926, 1536, 1819
Tth111I	GACNNNGTC	1 cut(s)	1649
Van91I	CCANNNNNTGG	1 cut(s)	1748
VneI	GTGCAC	1 cut(s)	263
VpaK11BI	GGWCC	3 cut(s)	249, 356, 1697
XagI	CCTNNNNNAGG	1 cut(s)	1722
XapI	RAATTY	4 cut(s)	504, 513, 1128, 1234
XceI	RCATGY	1 cut(s)	692
XcmI	CCANNNNNNNNNTGG	2 cut(s)	324, 752
XhoI	CTCGAG	1 cut(s)	1492
XmiI	GTMKAC	1 cut(s)	685
XmnI	GAANNNNTTC	1 cut(s)	1593
ZrmI	AGTACT	2 cut(s)	749, 1314
Zsp2I	ATGCAT	2 cut(s)	6, 487

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.