Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0001557

Physical Location & Seq

Genomic Coordinates Reverse (-)

14743361 .. 14749048

Gene Structure 5688 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG184100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1878 bp

ATGGCCAATCCTACTTACCAGGAATCCTTGTCATTTGGAGGCCCAGACCATCCTCTGGGTCAAGAAGAAGTTATTCCATGTGAGAGTGGAACCCTGAAGGTTTTGCTACATGGGTCCCTAGTCATATGGGTCAAGGAGGCCAAAAACCTTCCTGACATGGAGAGTTTTCGCAAGCATGTGGGGCATGCAATTTCGAAGTTGCCTGGGACGAGCCGCAAAAATATAATCAGTTCTCCATATGTTACGATTTCTTTATCAAATGCTGTAATTGCGAGGACCTTTGTGAAGAGTAGTATCGAGAACCCTGTGTGGCAGCAACATTTTGATGTTCCTGTTGCTCATTATGCTTCACAAGTGAACTTTGTTGTGAAACACAGTGATGTTTTCGGCTCTAAGACCATAGGTTTTGTTGGAATCTCAGCTCAACAGTTGTACTCTGGCATCAAAGTTGAGGGAACCTTCCCTATCCTTGACATCACCAGTGGTAAAAGCTATAGGCCTGGAGCTGTGTTGAGCTTATCAATTCAGTATACCGTGATTGAGAAAATGGCATTTTATAATCGCGGAGTAGGTTTAGATCCTGATCATCAAGGGGTCCCTGGTACTTACTTTCCTGTTAGGAAAGGCGGTAAAGTTACTCTTTATCAAGATGCTCATGTTCCTGACGGTTGCCTTCCCAACTTCAAGCTTGATGGCGGTCTTAAGTACGAGCATGGAAATTGTTGGCAAGACATATTTGATGCAATAAGTCAGGCCCGCCGTTTGATATACATAACTGGGTGGTCACTGCACCCCAAAGTCAGATTGCTTCGGAATAATAATGGTTCATCAGATAGCACATTAGGTGATCTGCTGAAGACCAAGTCACAGGAAGGTGTGAAAGTTCTGCTTCTTGTTTGGGACGATCCAACTTCTATTAAGGGATTTAAAATGGAAGGGCTCATGCATACCAATGATGAAGACGCTCGACGTTTCTTTAAGGACTCTTCAGTTCAATTTCTACTCTGCCCTCGATCATCAGACCAAAGCTGGTGGAAAAAGCTGGAAGCTGGAATAGTCTATACCCATCATCAGAAAACTGTAATTGTGGACGCTGATGCTGGTCATTTTAAAAGAAAGATCATTGCATTTGTTGGAGGTCTTGATTTGTGCTTGGGACGTTATGATACTCCGGAGCATTCTATATTTAGGACCTTACGTACAGTGCACAAGGATGACAATCGTAACCCGACTTTCTCGAAACCCGTTATTGGGTGTCCAAGGCAGCCATGGCATGATTTGCACAGTAAAATTGATGGTCCAGCTGCTTATGACATCCTCACCAATTTTGAGCAGCGTTGGGGGATGGCTTCAAAACCACATGGTCTTCAAAAACTAAAAGAACGAGGACTTCAAAAACTGAAATTACCCAAGATTGAGAAAATTCCTGAAATTCTTGGGATGACAGAGGTTCCTCGCTTGAGTGAGGATGATAAAGAAGCTTGGGATATTCAGGTTTTCCGTTCAATTGATTCCCATTCAGTGCAAGGATTTCCCGAAGACACTGGAGAAGCTACAAGGATGAACCTTGTTTGTGGGAAAAATGTGCTGATAGACATGAGTATACATGCAGCATATGTAAAAGCAATCCGTGCGGCTCAACATTTTATTTACATAGAGAACCAGTACTTTCTTGGATCATCATATAATTGGAAGTCAGACATTAGTGATACAGGTGCAAACAATTTGATACCGATGGAAATCGCTCTGAAAATAGCAAACAAAATCAAAGCAAATGAGAAGTTTTCTGTATATATTGTCATCCCCATGTGGCCAGAAGGTGATCCCAATACTATGCCTCTTCAAAGAATTCTCCTTTGGCAGGTAATCTACTATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005488 GO:0005543 GO:0005546 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005886 GO:0005911 GO:0006629 GO:0006643 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008289 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009790 GO:0009791 GO:0009793 GO:0009814 GO:0009816 GO:0009987 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0022414 GO:0022626 GO:0030054 GO:0032501 GO:0032502 GO:0032991 GO:0035091 GO:0042221 GO:0042578 GO:0042742 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0045087 GO:0046686 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0061458 GO:0071704 GO:0071944 GO:0098542 GO:1901981 GO:1902936 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

625

Amino Acids

70.31

Weight (kDa)

8.65

Isoelectric Point (pI)

34.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
C2	PF00168	38 - 155	7.2e-13	C2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11830 AT4G11830 AT4G11830 AT4G11830 AT4G11840 AT4G11840 AT4G11850
fragaria_vesca	FvH4_5g01274 FvH4_5g01290 FvH4_5g01290 FvH4_5g01290
malus_domestica	MD04G1069600.v1.1
prunus_persica	Prupe.5G088300_v2.0.a1 Prupe.5G088300_v2.0.a1
pyrus_communis	pycom04g06330
rosa_chinensis	RchiOBHm_Chr4g0413221 RchiOBHm_Chr7g0199651 RchiOBHm_Chr7g0199691 RchiOBHm_Chr7g0199711 RchiOBHm_Chr7g0199731
rosa_laevigata	RLG00000003775 RLG00000003776 RLG00000003777 RLG00000003778 RLG00000003779
rosa_multiflora	Rmu_co8400099.1_g000001 Rmu_sc0002748.1_g000025 Rmu_sc0002748.1_g000027 Rmu_sc0002748.1_g000028 Rmu_sc0009191.1_g000004
rosa_roxburghii	Rroxscaffold_3G00256480 Rroxscaffold_3G00256490 Rroxscaffold_3G00256520
rosa_rugosa	Rorug07G0055600 Rorug07G0055800 Rorug07G0055900
rosa_samantha	Rh7AG180700 Rh7AG181000 Rh7AG181200 Rh7BG183600 Rh7BG183900 Rh7BG184100 Rh7CG190400 Rh7CG190600 Rh7CG190700 Rh7DG183600 Rh7DG183800
rosa_wichuraiana	Rw7G015870 Rw7G015880 Rw7G015890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	558
Acc36I	ACCTGC	1 cut(s)	1852
AccB7I	CCANNNNNTGG	1 cut(s)	55
AccI	GTMKAC	2 cut(s)	530, 1603
AccII	CGCG	1 cut(s)	564
AccIII	TCCGGA	1 cut(s)	1171
AciI	CCGC	6 cut(s)	214, 564, 627, 696, 757, 1634
AclWI	GGATC	4 cut(s)	572, 899, 1684, 1817
AcoI	YGGCCR	2 cut(s)	3, 1811
AcsI	RAATTY	3 cut(s)	1422, 1431, 1848
AcuI	CTGAAG	3 cut(s)	116, 875, 972
AfaI	GTAC	5 cut(s)	434, 604, 707, 1201, 1667
AfiI	CCNNNNNNNGG	4 cut(s)	55, 1250, 1251, 1861
AflII	CTTAAG	1 cut(s)	701
AgsI	TTSAA	7 cut(s)	685, 995, 1353, 1370, 1394, 1506, 1844
AjnI	CCWGG	4 cut(s)	18, 202, 499, 598
AjuI	GAANNNNNNNTTGG	2 cut(s)	1840, 1872
Alw21I	GWGCWC	1 cut(s)	1209
Alw44I	GTGCAC	1 cut(s)	1205
AlwI	GGATC	4 cut(s)	572, 899, 1684, 1817
Aor13HI	TCCGGA	1 cut(s)	1171
AoxI	GGCC	6 cut(s)	3, 40, 138, 497, 753, 1811
ApaLI	GTGCAC	1 cut(s)	1205
ApeKI	GCWGC	5 cut(s)	313, 1264, 1304, 1333, 1610
ApoI	RAATTY	3 cut(s)	1422, 1431, 1848
Asp700I	GAANNNNTTC	1 cut(s)	72
AspS9I	GGNCC	7 cut(s)	41, 114, 276, 595, 754, 1191, 1298
AsuHPI	GGTGA	4 cut(s)	469, 857, 1312, 1832
AsuII	TTCGAA	1 cut(s)	194
AvaII	GGWCC	5 cut(s)	114, 276, 595, 1191, 1298
BaeGI	GKGCMC	1 cut(s)	1209
BalI	TGGCCA	2 cut(s)	5, 1813
BanII	GRGCYC	1 cut(s)	942
BbsI	GAAGAC	4 cut(s)	863, 966, 1358, 1545
Bbv12I	GWGCWC	1 cut(s)	1209
BbvI	GCAGC	5 cut(s)	325, 1276, 1291, 1345, 1622
BccI	CCATC	6 cut(s)	57, 686, 1074, 1289, 1339, 1729
BceAI	ACGGC	1 cut(s)	744
BciT130I	CCWGG	4 cut(s)	20, 204, 501, 600
BclI	TGATCA	1 cut(s)	583
BfaI	CTAG	1 cut(s)	119
BfmI	CTRYAG	1 cut(s)	493
BfrI	CTTAAG	1 cut(s)	701
BfuAI	ACCTGC	1 cut(s)	1852
BisI	GCNGC	7 cut(s)	214, 314, 1265, 1305, 1334, 1611, 1635
BlsI	GCNGC	7 cut(s)	215, 315, 1266, 1306, 1335, 1612, 1636
BmcAI	AGTACT	1 cut(s)	1667
Bme1390I	CCNGG	4 cut(s)	20, 204, 501, 600
Bme18I	GGWCC	5 cut(s)	114, 276, 595, 1191, 1298
BmgT120I	GGNCC	7 cut(s)	41, 114, 276, 595, 754, 1191, 1298
BmiI	GGNNCC	7 cut(s)	91, 115, 116, 457, 596, 597, 1452
BmrFI	CCNGG	4 cut(s)	20, 204, 501, 600
BmrI	ACTGGG	1 cut(s)	786
BmsI	GCATC	4 cut(s)	450, 640, 730, 1087
BmuI	ACTGGG	1 cut(s)	786
BpiI	GAAGAC	4 cut(s)	863, 966, 1358, 1545
BpmI	CTGGAG	2 cut(s)	522, 1566
Bpu14I	TTCGAA	1 cut(s)	194
BpuEI	CTTGAG	1 cut(s)	1480
BsaAI	YACGTR	1 cut(s)	1199
BsaBI	GATNNNNATC	3 cut(s)	582, 1218, 1739
BsaJI	CCNNGG	4 cut(s)	203, 598, 1259, 1268
BsaWI	WCCGGW	1 cut(s)	1171
Bsc4I	CCNNNNNNNGG	4 cut(s)	55, 1250, 1251, 1861
Bse1I	ACTGG	4 cut(s)	480, 781, 1549, 1663
Bse3DI	GCAATG	1 cut(s)	1122
Bse8I	GATNNNNATC	3 cut(s)	582, 1218, 1739
BseAI	TCCGGA	1 cut(s)	1171
BseBI	CCWGG	4 cut(s)	20, 204, 501, 600
BseDI	CCNNGG	4 cut(s)	203, 598, 1259, 1268
BseGI	GGATG	8 cut(s)	49, 1219, 1314, 1350, 1446, 1474, 1566, 1800
BseJI	GATNNNNATC	3 cut(s)	582, 1218, 1739
BseLI	CCNNNNNNNGG	4 cut(s)	55, 1250, 1251, 1861
BseMI	GCAATG	1 cut(s)	1122
BseMII	CTCAG	1 cut(s)	432
BseNI	ACTGG	4 cut(s)	480, 781, 1549, 1663
BseSI	GKGCMC	1 cut(s)	1209
BseXI	GCAGC	5 cut(s)	325, 1276, 1291, 1345, 1622
BsgI	GTGCAG	1 cut(s)	773
Bsh1236I	CGCG	1 cut(s)	564
BshFI	GGCC	6 cut(s)	5, 42, 140, 499, 755, 1813
BsiHKAI	GWGCWC	1 cut(s)	1209
BsiSI	CCGG	1 cut(s)	1172
BslFI	GGGAC	5 cut(s)	100, 220, 581, 914, 1170
BslI	CCNNNNNNNGG	4 cut(s)	55, 1250, 1251, 1861
BsmFI	GGGAC	5 cut(s)	100, 220, 581, 914, 1170
BsmI	GAATGC	1 cut(s)	1177
BsnI	GGCC	6 cut(s)	5, 42, 140, 499, 755, 1813
Bsp119I	TTCGAA	1 cut(s)	194
Bsp1286I	GDGCHC	2 cut(s)	942, 1209
Bsp13I	TCCGGA	1 cut(s)	1171
Bsp143I	GATC	8 cut(s)	577, 583, 847, 904, 1013, 1119, 1676, 1822
Bsp19I	CCATGG	1 cut(s)	1268
BspACI	CCGC	6 cut(s)	214, 564, 627, 696, 757, 1634
BspANI	GGCC	6 cut(s)	5, 42, 140, 499, 755, 1813
BspCNI	CTCAG	1 cut(s)	431
BspEI	TCCGGA	1 cut(s)	1171
BspFNI	CGCG	1 cut(s)	564
BspLI	GGNNCC	7 cut(s)	91, 115, 116, 457, 596, 597, 1452
BspMI	ACCTGC	1 cut(s)	1852
BspPI	GGATC	4 cut(s)	572, 899, 1684, 1817
BspT104I	TTCGAA	1 cut(s)	194
BspTI	CTTAAG	1 cut(s)	701
BsrDI	GCAATG	1 cut(s)	1122
BsrI	ACTGG	4 cut(s)	480, 781, 1549, 1663
BssECI	CCNNGG	4 cut(s)	203, 598, 1259, 1268
BssMI	GATC	8 cut(s)	577, 583, 847, 904, 1013, 1119, 1676, 1822
BssNAI	GTATAC	2 cut(s)	531, 1604
BssT1I	CCWWGG	2 cut(s)	1259, 1268
Bst1107I	GTATAC	2 cut(s)	531, 1604
Bst2UI	CCWGG	4 cut(s)	20, 204, 501, 600
Bst4CI	ACNGT	7 cut(s)	377, 429, 535, 668, 1081, 1204, 1286
Bst6I	CTCTTC	3 cut(s)	281, 991, 1845
BstAFI	CTTAAG	1 cut(s)	701
BstAPI	GCANNNNNTGC	2 cut(s)	1279, 1631
BstBAI	YACGTR	1 cut(s)	1199
BstBI	TTCGAA	1 cut(s)	194
BstC8I	GCNNGC	3 cut(s)	173, 186, 757
BstDEI	CTNAG	2 cut(s)	393, 418
BstDSI	CCRYGG	1 cut(s)	1268
BstENI	CCTNNNNNAGG	1 cut(s)	1859
BstF5I	GGATG	8 cut(s)	49, 1219, 1314, 1350, 1446, 1474, 1566, 1800
BstFNI	CGCG	1 cut(s)	564
BstKTI	GATC	8 cut(s)	580, 586, 850, 907, 1016, 1122, 1679, 1825
BstMBI	GATC	8 cut(s)	577, 583, 847, 904, 1013, 1119, 1676, 1822
BstMWI	GCNNNNNNNGC	6 cut(s)	181, 269, 344, 1270, 1279, 1631
BstNI	CCWGG	4 cut(s)	20, 204, 501, 600
BstNSI	RCATGY	3 cut(s)	179, 188, 1610
BstSCI	CCNGG	4 cut(s)	18, 202, 499, 598
BstSFI	CTRYAG	1 cut(s)	493
BstSLI	GKGCMC	1 cut(s)	1209
BstSNI	TACGTA	1 cut(s)	1199
BstUI	CGCG	1 cut(s)	564
BstV1I	GCAGC	5 cut(s)	325, 1276, 1291, 1345, 1622
BstV2I	GAAGAC	4 cut(s)	863, 966, 1358, 1545
BstX2I	RGATCY	1 cut(s)	577
BstYI	RGATCY	1 cut(s)	577
BstZ17I	GTATAC	2 cut(s)	531, 1604
BsuRI	GGCC	6 cut(s)	5, 42, 140, 499, 755, 1813
BtgI	CCRYGG	1 cut(s)	1268
BtsCI	GGATG	8 cut(s)	49, 1219, 1314, 1350, 1446, 1474, 1566, 1800
BtsI	GCAGTG	1 cut(s)	785
BtsIMutI	CAGTG	6 cut(s)	382, 487, 785, 1209, 1527, 1542
BveI	ACCTGC	1 cut(s)	1852
Cac8I	GCNNGC	3 cut(s)	173, 186, 757
Cfr13I	GGNCC	7 cut(s)	41, 114, 276, 595, 754, 1191, 1298
CseI	GACGC	2 cut(s)	971, 1100
Csp6I	GTAC	5 cut(s)	433, 603, 706, 1200, 1666
CspCI	CAANNNNNGTGG	2 cut(s)	1013, 1048
CviQI	GTAC	5 cut(s)	433, 603, 706, 1200, 1666
DdeI	CTNAG	2 cut(s)	393, 418
DpnI	GATC	8 cut(s)	579, 585, 849, 906, 1015, 1121, 1678, 1824
DpnII	GATC	8 cut(s)	577, 583, 847, 904, 1013, 1119, 1676, 1822
DraI	TTTAAA	2 cut(s)	928, 1111
EaeI	YGGCCR	2 cut(s)	3, 1811
Eam1104I	CTCTTC	3 cut(s)	281, 991, 1845
EarI	CTCTTC	3 cut(s)	281, 991, 1845
Eco105I	TACGTA	1 cut(s)	1199
Eco130I	CCWWGG	2 cut(s)	1259, 1268
Eco147I	AGGCCT	1 cut(s)	499
Eco24I	GRGCYC	1 cut(s)	942
Eco47I	GGWCC	5 cut(s)	114, 276, 595, 1191, 1298
Eco57I	CTGAAG	3 cut(s)	116, 875, 972
EcoNI	CCTNNNNNAGG	1 cut(s)	1859
EcoO109I	RGGNCCY	4 cut(s)	114, 276, 595, 1191
EcoRI	GAATTC	1 cut(s)	1848
EcoRII	CCWGG	4 cut(s)	18, 202, 499, 598
EcoT14I	CCWWGG	2 cut(s)	1259, 1268
EcoT22I	ATGCAT	1 cut(s)	948
EcoT38I	GRGCYC	1 cut(s)	942
ErhI	CCWWGG	2 cut(s)	1259, 1268
FalI	AAGNNNNNCTT	4 cut(s)	624, 656, 873, 905
FaqI	GGGAC	5 cut(s)	100, 220, 581, 914, 1170
FauI	CCCGC	1 cut(s)	764
FauNDI	CATATG	3 cut(s)	125, 238, 1615
FbaI	TGATCA	1 cut(s)	583
FblI	GTMKAC	2 cut(s)	530, 1603
Fnu4HI	GCNGC	7 cut(s)	214, 314, 1265, 1305, 1334, 1611, 1635
FokI	GGATG	8 cut(s)	36, 1226, 1301, 1357, 1453, 1481, 1573, 1787
FriOI	GRGCYC	1 cut(s)	942
Fsp4HI	GCNGC	7 cut(s)	214, 314, 1265, 1305, 1334, 1611, 1635
FspBI	CTAG	1 cut(s)	119
GluI	GCNGC	7 cut(s)	214, 314, 1265, 1305, 1334, 1611, 1635
GsuI	CTGGAG	2 cut(s)	522, 1566
HaeIII	GGCC	6 cut(s)	5, 42, 140, 499, 755, 1813
HapII	CCGG	1 cut(s)	1172
HgaI	GACGC	2 cut(s)	971, 1100
HindIII	AAGCTT	2 cut(s)	686, 1479
HinfI	GANTC	4 cut(s)	23, 414, 983, 1511
HpaII	CCGG	1 cut(s)	1172
HphI	GGTGA	4 cut(s)	469, 857, 1312, 1832
Hpy166II	GTNNAC	5 cut(s)	358, 531, 1090, 1207, 1604
Hpy188I	TCNGA	7 cut(s)	803, 813, 832, 1021, 1074, 1699, 1749
Hpy8I	GTNNAC	5 cut(s)	358, 531, 1090, 1207, 1604
Hpy99I	CGWCG	1 cut(s)	972
HpyAV	CCTTC	7 cut(s)	91, 158, 469, 683, 866, 929, 1811
HpyCH4III	ACNGT	7 cut(s)	377, 429, 535, 668, 1081, 1204, 1286
HpyCH4IV	ACGT	3 cut(s)	970, 1159, 1198
HpyF10VI	GCNNNNNNNGC	6 cut(s)	181, 269, 344, 1270, 1279, 1631
HpyF3I	CTNAG	2 cut(s)	393, 418
HpySE526I	ACGT	3 cut(s)	970, 1159, 1198
KflI	GGGWCCC	2 cut(s)	114, 595
Kpn2I	TCCGGA	1 cut(s)	1171
Ksp22I	TGATCA	1 cut(s)	583
Kzo9I	GATC	8 cut(s)	577, 583, 847, 904, 1013, 1119, 1676, 1822
LmnI	GCTCC	2 cut(s)	503, 1174
Lsp1109I	GCAGC	5 cut(s)	325, 1276, 1291, 1345, 1622
LweI	GCATC	4 cut(s)	450, 640, 730, 1087
MaeI	CTAG	1 cut(s)	119
MaeII	ACGT	3 cut(s)	970, 1159, 1198
MaeIII	GTNAC	5 cut(s)	241, 634, 783, 864, 1223
MalI	GATC	8 cut(s)	579, 585, 849, 906, 1015, 1121, 1678, 1824
MboI	GATC	8 cut(s)	577, 583, 847, 904, 1013, 1119, 1676, 1822
MboII	GAAGA	8 cut(s)	77, 298, 868, 971, 978, 1358, 1550, 1832
MfeI	CAATTG	1 cut(s)	1506
MflI	RGATCY	1 cut(s)	577
MhlI	GDGCHC	2 cut(s)	942, 1209
MlsI	TGGCCA	2 cut(s)	5, 1813
MluNI	TGGCCA	2 cut(s)	5, 1813
MlyI	GAGTC	1 cut(s)	977
MmeI	TCCRAC	3 cut(s)	391, 932, 1114
Mox20I	TGGCCA	2 cut(s)	5, 1813
Mph1103I	ATGCAT	1 cut(s)	948
MroI	TCCGGA	1 cut(s)	1171
MroXI	GAANNNNTTC	1 cut(s)	72
MscI	TGGCCA	2 cut(s)	5, 1813
MseI	TTAA	5 cut(s)	702, 918, 927, 978, 1110
MslI	CAYNNNNRTG	5 cut(s)	324, 378, 951, 1212, 1805
Msp20I	TGGCCA	2 cut(s)	5, 1813
MspA1I	CMGCKG	1 cut(s)	1304
MspCI	CTTAAG	1 cut(s)	701
MspI	CCGG	1 cut(s)	1172
MspR9I	CCNGG	4 cut(s)	20, 204, 501, 600
MunI	CAATTG	1 cut(s)	1506
Mva1269I	GAATGC	1 cut(s)	1177
MvaI	CCWGG	4 cut(s)	20, 204, 501, 600
MvnI	CGCG	1 cut(s)	564
MwoI	GCNNNNNNNGC	6 cut(s)	181, 269, 344, 1270, 1279, 1631
NcoI	CCATGG	1 cut(s)	1268
NdeI	CATATG	3 cut(s)	125, 238, 1615
NdeII	GATC	8 cut(s)	577, 583, 847, 904, 1013, 1119, 1676, 1822
NlaIV	GGNNCC	7 cut(s)	91, 115, 116, 457, 596, 597, 1452
NmuCI	GTSAC	2 cut(s)	783, 864
NsiI	ATGCAT	1 cut(s)	948
NspI	RCATGY	3 cut(s)	179, 188, 1610
NspV	TTCGAA	1 cut(s)	194
PaeI	GCATGC	1 cut(s)	188
PceI	AGGCCT	1 cut(s)	499
PctI	GAATGC	1 cut(s)	1177
PdmI	GAANNNNTTC	1 cut(s)	72
PfeI	GAWTC	3 cut(s)	23, 414, 1511
PflFI	GACNNNGTC	1 cut(s)	862
PflMI	CCANNNNNTGG	1 cut(s)	55
PkrI	GCNGC	7 cut(s)	215, 315, 1266, 1306, 1335, 1612, 1636
PleI	GAGTC	1 cut(s)	977
PpsI	GAGTC	1 cut(s)	977
Ppu21I	YACGTR	1 cut(s)	1199
PpuMI	RGGWCCY	4 cut(s)	114, 276, 595, 1191
PsiI	TTATAA	1 cut(s)	558
Psp5II	RGGWCCY	4 cut(s)	114, 276, 595, 1191
Psp6I	CCWGG	4 cut(s)	18, 202, 499, 598
PspGI	CCWGG	4 cut(s)	18, 202, 499, 598
PspN4I	GGNNCC	7 cut(s)	91, 115, 116, 457, 596, 597, 1452
PspPI	GGNCC	7 cut(s)	41, 114, 276, 595, 754, 1191, 1298
PspPPI	RGGWCCY	4 cut(s)	114, 276, 595, 1191
PsuI	RGATCY	1 cut(s)	577
PsyI	GACNNNGTC	1 cut(s)	862
PvuII	CAGCTG	1 cut(s)	1304
RsaI	GTAC	5 cut(s)	434, 604, 707, 1201, 1667
RsaNI	GTAC	5 cut(s)	433, 603, 706, 1200, 1666
RseI	CAYNNNNRTG	5 cut(s)	324, 378, 951, 1212, 1805
SaqAI	TTAA	5 cut(s)	702, 918, 927, 978, 1110
SatI	GCNGC	7 cut(s)	214, 314, 1265, 1305, 1334, 1611, 1635
Sau3AI	GATC	8 cut(s)	577, 583, 847, 904, 1013, 1119, 1676, 1822
Sau96I	GGNCC	7 cut(s)	41, 114, 276, 595, 754, 1191, 1298
ScaI	AGTACT	1 cut(s)	1667
SchI	GAGTC	1 cut(s)	977
ScrFI	CCNGG	4 cut(s)	20, 204, 501, 600
SduI	GDGCHC	2 cut(s)	942, 1209
SfaNI	GCATC	4 cut(s)	450, 640, 730, 1087
SfcI	CTRYAG	1 cut(s)	493
SfuI	TTCGAA	1 cut(s)	194
SinI	GGWCC	5 cut(s)	114, 276, 595, 1191, 1298
SmiMI	CAYNNNNRTG	5 cut(s)	324, 378, 951, 1212, 1805
SmlI	CTYRAG	2 cut(s)	701, 1459
SmoI	CTYRAG	2 cut(s)	701, 1459
SnaBI	TACGTA	1 cut(s)	1199
SphI	GCATGC	1 cut(s)	188
SseBI	AGGCCT	1 cut(s)	499
SsiI	CCGC	6 cut(s)	214, 564, 627, 696, 757, 1634
SspMI	CTAG	1 cut(s)	119
StuI	AGGCCT	1 cut(s)	499
StyD4I	CCNGG	4 cut(s)	18, 202, 499, 598
StyI	CCWWGG	2 cut(s)	1259, 1268
TaaI	ACNGT	7 cut(s)	377, 429, 535, 668, 1081, 1204, 1286
TaiI	ACGT	3 cut(s)	973, 1162, 1201
TaqI	TCGA	5 cut(s)	194, 297, 967, 1012, 1238
TatI	WGTACW	2 cut(s)	432, 1665
TauI	GCSGC	2 cut(s)	216, 1637
TfiI	GAWTC	3 cut(s)	23, 414, 1511
Tru1I	TTAA	5 cut(s)	702, 918, 927, 978, 1110
Tru9I	TTAA	5 cut(s)	702, 918, 927, 978, 1110
TscAI	CASTG	6 cut(s)	382, 487, 792, 1209, 1527, 1549
TseFI	GTSAC	2 cut(s)	783, 864
TseI	GCWGC	5 cut(s)	313, 1264, 1304, 1333, 1610
Tsp45I	GTSAC	2 cut(s)	783, 864
TspDTI	ATGAA	3 cut(s)	816, 972, 1577
TspGWI	ACGGA	2 cut(s)	1490, 1619
TspRI	CASTG	6 cut(s)	382, 487, 792, 1209, 1527, 1549
Tth111I	GACNNNGTC	1 cut(s)	862
Van91I	CCANNNNNTGG	1 cut(s)	55
Vha464I	CTTAAG	1 cut(s)	701
VneI	GTGCAC	1 cut(s)	1205
VpaK11BI	GGWCC	5 cut(s)	114, 276, 595, 1191, 1298
XagI	CCTNNNNNAGG	1 cut(s)	1859
XapI	RAATTY	3 cut(s)	1422, 1431, 1848
XceI	RCATGY	3 cut(s)	179, 188, 1610
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1266, 1670
XmiI	GTMKAC	2 cut(s)	530, 1603
XmnI	GAANNNNTTC	1 cut(s)	72
XspI	CTAG	1 cut(s)	119
ZrmI	AGTACT	1 cut(s)	1667
Zsp2I	ATGCAT	1 cut(s)	948

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.