Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0001557

Physical Location & Seq

Genomic Coordinates Reverse (-)

17744617 .. 17749168

Gene Structure 4552 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ17873

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGCACCAATTATTTGGTGCATTTTTTTTTAATATAGCCTACCTATTTTGCCACTGTTATCAGTGGCTCATGCATACTAATGACGAAGACGCTCGACGTTTCTTTAAGGACTCTTCAGTTCAGTTTTTACTCTGCCCTCGATCATCAGTCCAAAGCTGGGGGAAAAAGATGGAAGCTGGAATAGTCTATACCCATCATCAGAAAACTGTAATTGTGGACGCTGATGCTGGACATATTAAAAGAAAGATCATTGCATTTGTTGGAGGTCTTGACTTGTGCTTGGGACGTTATGATACTCCGGAGCATTCTATATTTAGGACCTTACGTTCAGTGCACAAGGATGACAATCGTAACCCTACTTTCTCGAAACCCGTTATTGGGTGTCCAAGGCAGCCATGGCATGATTTGCACAGTAAAATTGATGGTCCAGCTGCTTATGACATCCTCACCAATTTTGAGCAGCGTTGGGGGATGGCTTCAAAACCACATGGTCTTCACAAACTAAAAGAACGAGGACTTCAAAAACTGAAATTACGAGGAGATGATGATGATGCATTAATCAAGATTGAGAAAATTCCTGAAATTCTTGGGATGACAGAGGTTCCTCGCTTGAGTGAGGATGATAAAGAAGCTTGGGATATTCAGGTTTTCCGTTCAATTGATTCCCATTCAGTGCAAGGATTTCCCGAAGACACTGGAGAAGCTACAAGGATGAACCTTGTTTGTGGGAAAAATGTGCTGATAGACATGAGTATACATGCAGCATATGTAAAAGCAATCCGTGCTGCTCAACATTTTATTTACATAGAGAACCAGTACTTTATTGGATCATCATATAATTGGAAGTCAAACATTGGTGATAGTGATACAGGTGCAAACAATTTGATACCGATGGAAATTGCTCTGAAAATAGCAAACAAAATCAAAGCAAATGAGAAGTTTTCTGTATATATTGTCATCCCCATGTGGCCAGAAGGTGATCCCAATGATATGCCCCTTCAAAGAATTCTCCTTTGGCAGCATAAAACAATGCAAATGATGTATGAAATCATTTACAAGGCTCTAAAGGAGGTTGGGCTCGAAAATAAGAACTGTCCACAAGACTACTTGAATTTCTTTTGCCTCGGAAATCGTGAGAAACCAAGTGGAGATGCTGCAAATAATTTAAGTGCAGCAAACACTCCCGAAGTACTCACTCAGAATAGTCGGCGATTTATGATTTATGTCCATTCTAAAGGAATGATAGTGGATGATGAATATGTTATAGTGGGATCTGCAAATATCAATCAGCGATCCATGGAAGGTCTCCGAGATACTGAAATAGCAATGGGGGCTTATCAGCCTCATCATACTTGGGCGAGAAAACTCTCAAGTCCACACGGAAAGATATATGGATACAGAATGTCACTGTGGGCAGAGCATTTAGGACTTGTTGAAGAATGTTTCAATCAGCCAGAGAGTCTTGAATGTGTTCAAAGGGTAAGGTCTTTGGGTGAGCAGAACTGGAGTCAATACTTGGACGACGTAGTCACAGAAATGAAGGGTCACCTCCTCAAGTATCCGGTTGAAGTTGGTCCAACGGGCACGGTGGGGCCTCTTCCAGGGTGTCCAACATTTCCAGACGTTGGTGGCAATATATTGGGGAGTCTCGGCGACATAAAAGTAGTGAAGAATCTGCGTATCAGTAGCAGTGGGAGGACAATATCACTTAGAGGCGCCATCATCACCACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004620 GO:0004630 GO:0005488 GO:0005543 GO:0005546 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005840 GO:0005886 GO:0005911 GO:0006629 GO:0006643 GO:0006950 GO:0006952 GO:0006955 GO:0006979 GO:0007275 GO:0008081 GO:0008150 GO:0008152 GO:0008289 GO:0009506 GO:0009507 GO:0009536 GO:0009605 GO:0009607 GO:0009617 GO:0009790 GO:0009791 GO:0009793 GO:0009814 GO:0009816 GO:0009987 GO:0010035 GO:0010038 GO:0010044 GO:0010154 GO:0016020 GO:0016298 GO:0016787 GO:0016788 GO:0022414 GO:0022626 GO:0030054 GO:0032501 GO:0032502 GO:0032991 GO:0035091 GO:0042221 GO:0042578 GO:0042742 GO:0043167 GO:0043168 GO:0043207 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044255 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0045087 GO:0046686 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051704 GO:0051707 GO:0055044 GO:0061458 GO:0071704 GO:0071944 GO:0098542 GO:1901981 GO:1902936 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00564 ko00565 ko01100 ko01110 ko04014 ko04024 ko04071 ko04072 ko04144 ko04666 ko04724 ko04912 ko05231 map00564 map00565 map01100 map01110 map04014 map04024 map04071 map04072 map04144 map04666 map04724 map04912 map05231

Pfam Domains

Protein Families

C2 PLD_C PLDc

Protein Analysis

577

Amino Acids

65.41

Weight (kDa)

6.89

Isoelectric Point (pI)

41.06

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PLDc_2	PF13091	386 - 443	9.2e-07	PLD-like domain
PLDc	PF00614	407 - 432	1.7e-08	Phospholipase D Active site motif
PLD_C	PF12357	479 - 549	6.5e-29	Phospholipase D C terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001557)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G11830 AT4G11830 AT4G11830 AT4G11830 AT4G11840 AT4G11840 AT4G11850
fragaria_vesca	FvH4_5g01274 FvH4_5g01290 FvH4_5g01290 FvH4_5g01290
malus_domestica	MD04G1069600.v1.1
prunus_persica	Prupe.5G088300_v2.0.a1 Prupe.5G088300_v2.0.a1
pyrus_communis	pycom04g06330
rosa_chinensis	RchiOBHm_Chr4g0413221 RchiOBHm_Chr7g0199651 RchiOBHm_Chr7g0199691 RchiOBHm_Chr7g0199711 RchiOBHm_Chr7g0199731
rosa_laevigata	RLG00000003775 RLG00000003776 RLG00000003777 RLG00000003778 RLG00000003779
rosa_multiflora	Rmu_co8400099.1_g000001 Rmu_sc0002748.1_g000025 Rmu_sc0002748.1_g000027 Rmu_sc0002748.1_g000028 Rmu_sc0009191.1_g000004
rosa_roxburghii	Rroxscaffold_3G00256480 Rroxscaffold_3G00256490 Rroxscaffold_3G00256520
rosa_rugosa	Rorug07G0055600 Rorug07G0055800 Rorug07G0055900
rosa_samantha	Rh7AG180700 Rh7AG181000 Rh7AG181200 Rh7BG183600 Rh7BG183900 Rh7BG184100 Rh7CG190400 Rh7CG190600 Rh7CG190700 Rh7DG183600 Rh7DG183800
rosa_wichuraiana	Rw7G015870 Rw7G015880 Rw7G015890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1526
AccB1I	GGYRCC	1 cut(s)	1715
AccB7I	CCANNNNNTGG	1 cut(s)	1625
AccI	GTMKAC	1 cut(s)	754
AccIII	TCCGGA	1 cut(s)	298
AclWI	GGATC	4 cut(s)	835, 974, 1279, 1287
AcoI	YGGCCR	1 cut(s)	968
AcsI	RAATTY	4 cut(s)	573, 582, 1005, 1111
AcuI	CTGAAG	1 cut(s)	99
AcyI	GRCGYC	1 cut(s)	1716
AfaI	GTAC	2 cut(s)	818, 1191
AfiI	CCNNNNNNNGG	5 cut(s)	157, 377, 378, 1601, 1625
AjnI	CCWGG	1 cut(s)	1600
AjuI	GAANNNNNNNTTGG	2 cut(s)	997, 1029
AloI	GAACNNNNNNTCC	2 cut(s)	310, 342
AluBI	AGCT	5 cut(s)	156, 176, 431, 632, 704
AluI	AGCT	5 cut(s)	156, 176, 431, 632, 704
Alw21I	GWGCWC	1 cut(s)	336
Alw26I	GTCTC	2 cut(s)	1310, 1652
Alw44I	GTGCAC	1 cut(s)	332
AlwI	GGATC	4 cut(s)	835, 974, 1279, 1287
Aor13HI	TCCGGA	1 cut(s)	298
AoxI	GGCC	2 cut(s)	968, 1592
ApaLI	GTGCAC	1 cut(s)	332
ApeKI	GCWGC	8 cut(s)	391, 431, 460, 761, 785, 1018, 1154, 1172
ApoI	RAATTY	4 cut(s)	573, 582, 1005, 1111
AseI	ATTAAT	1 cut(s)	557
Asp700I	GAANNNNTTC	1 cut(s)	1470
AspLEI	GCGC	1 cut(s)	1718
AspS9I	GGNCC	4 cut(s)	318, 425, 1574, 1592
AsuHPI	GGTGA	6 cut(s)	439, 869, 989, 1505, 1538, 1717
AvaII	GGWCC	3 cut(s)	318, 425, 1574
BaeGI	GKGCMC	2 cut(s)	336, 1586
BalI	TGGCCA	1 cut(s)	970
BanI	GGYRCC	1 cut(s)	1715
BanII	GRGCYC	1 cut(s)	1080
BbsI	GAAGAC	3 cut(s)	93, 485, 696
Bbv12I	GWGCWC	1 cut(s)	336
BbvI	GCAGC	8 cut(s)	403, 418, 472, 772, 773, 1030, 1141, 1184
BccI	CCATC	6 cut(s)	163, 201, 416, 466, 886, 1727
BciT130I	CCWGG	1 cut(s)	1602
BciVI	GTATCC	2 cut(s)	1388, 1569
BcoDI	GTCTC	2 cut(s)	1310, 1652
BfoI	RGCGCY	1 cut(s)	1719
BfuI	GTATCC	2 cut(s)	1388, 1569
BisI	GCNGC	8 cut(s)	392, 432, 461, 762, 786, 1019, 1155, 1173
BlsI	GCNGC	8 cut(s)	393, 433, 462, 763, 787, 1020, 1156, 1174
BmcAI	AGTACT	2 cut(s)	818, 1191
Bme1390I	CCNGG	1 cut(s)	1602
Bme18I	GGWCC	3 cut(s)	318, 425, 1574
BmgT120I	GGNCC	4 cut(s)	318, 425, 1574, 1592
BmiI	GGNNCC	3 cut(s)	603, 1593, 1717
BmrFI	CCNGG	1 cut(s)	1602
BmsI	GCATC	3 cut(s)	214, 541, 1141
BpiI	GAAGAC	3 cut(s)	93, 485, 696
BpmI	CTGGAG	2 cut(s)	717, 1525
BpuEI	CTTGAG	3 cut(s)	631, 1354, 1538
BsaBI	GATNNNNATC	1 cut(s)	345
BsaHI	GRCGYC	1 cut(s)	1716
BsaI	GGTCTC	1 cut(s)	1310
BsaJI	CCNNGG	5 cut(s)	386, 395, 1123, 1296, 1601
BsaWI	WCCGGW	2 cut(s)	298, 1561
Bsc4I	CCNNNNNNNGG	5 cut(s)	157, 377, 378, 1601, 1625
Bse1I	ACTGG	3 cut(s)	700, 814, 1508
Bse3DI	GCAATG	2 cut(s)	249, 1332
Bse8I	GATNNNNATC	1 cut(s)	345
BseAI	TCCGGA	1 cut(s)	298
BseBI	CCWGG	1 cut(s)	1602
BseDI	CCNNGG	5 cut(s)	386, 395, 1123, 1296, 1601
BseGI	GGATG	8 cut(s)	346, 441, 477, 597, 625, 717, 957, 1255
BseJI	GATNNNNATC	1 cut(s)	345
BseLI	CCNNNNNNNGG	5 cut(s)	157, 377, 378, 1601, 1625
BseMI	GCAATG	2 cut(s)	249, 1332
BseMII	CTCAG	1 cut(s)	1211
BseNI	ACTGG	3 cut(s)	700, 814, 1508
BseRI	GAGGAG	2 cut(s)	552, 1541
BseSI	GKGCMC	2 cut(s)	336, 1586
BseXI	GCAGC	8 cut(s)	403, 418, 472, 772, 773, 1030, 1141, 1184
BseYI	CCCAGC	1 cut(s)	156
BsgI	GTGCAG	1 cut(s)	1191
BshFI	GGCC	2 cut(s)	970, 1594
BshNI	GGYRCC	1 cut(s)	1715
BsiHKAI	GWGCWC	1 cut(s)	336
BsiSI	CCGG	2 cut(s)	299, 1562
BslFI	GGGAC	1 cut(s)	297
BslI	CCNNNNNNNGG	5 cut(s)	157, 377, 378, 1601, 1625
BsmAI	GTCTC	2 cut(s)	1310, 1652
BsmFI	GGGAC	1 cut(s)	297
BsmI	GAATGC	1 cut(s)	304
BsnI	GGCC	2 cut(s)	970, 1594
Bso31I	GGTCTC	1 cut(s)	1310
Bsp1286I	GDGCHC	3 cut(s)	336, 1080, 1586
Bsp13I	TCCGGA	1 cut(s)	298
Bsp143I	GATC	6 cut(s)	140, 246, 827, 979, 1271, 1292
Bsp19I	CCATGG	2 cut(s)	395, 1296
BspANI	GGCC	2 cut(s)	970, 1594
BspCNI	CTCAG	1 cut(s)	1210
BspEI	TCCGGA	1 cut(s)	298
BspLI	GGNNCC	3 cut(s)	603, 1593, 1717
BspPI	GGATC	4 cut(s)	835, 974, 1279, 1287
BspT107I	GGYRCC	1 cut(s)	1715
BspTNI	GGTCTC	1 cut(s)	1310
BsrDI	GCAATG	2 cut(s)	249, 1332
BsrI	ACTGG	3 cut(s)	700, 814, 1508
BssECI	CCNNGG	5 cut(s)	386, 395, 1123, 1296, 1601
BssMI	GATC	6 cut(s)	140, 246, 827, 979, 1271, 1292
BssNAI	GTATAC	1 cut(s)	755
BssNI	GRCGYC	1 cut(s)	1716
BssT1I	CCWWGG	3 cut(s)	386, 395, 1296
Bst1107I	GTATAC	1 cut(s)	755
Bst2UI	CCWGG	1 cut(s)	1602
Bst4CI	ACNGT	6 cut(s)	56, 208, 413, 1094, 1410, 1588
Bst6I	CTCTTC	2 cut(s)	118, 1602
BstACI	GRCGYC	1 cut(s)	1716
BstAPI	GCANNNNNTGC	2 cut(s)	406, 782
BstDEI	CTNAG	2 cut(s)	1197, 1709
BstDSI	CCRYGG	2 cut(s)	395, 1296
BstEII	GGTNACC	1 cut(s)	1544
BstENI	CCTNNNNNAGG	1 cut(s)	1599
BstF5I	GGATG	8 cut(s)	346, 441, 477, 597, 625, 717, 957, 1255
BstH2I	RGCGCY	1 cut(s)	1719
BstHHI	GCGC	1 cut(s)	1718
BstKTI	GATC	6 cut(s)	143, 249, 830, 982, 1274, 1295
BstMAI	GTCTC	2 cut(s)	1310, 1652
BstMBI	GATC	6 cut(s)	140, 246, 827, 979, 1271, 1292
BstMWI	GCNNNNNNNGC	4 cut(s)	397, 406, 782, 1331
BstNI	CCWGG	1 cut(s)	1602
BstNSI	RCATGY	1 cut(s)	761
BstPI	GGTNACC	1 cut(s)	1544
BstSCI	CCNGG	1 cut(s)	1600
BstSLI	GKGCMC	2 cut(s)	336, 1586
BstV1I	GCAGC	8 cut(s)	403, 418, 472, 772, 773, 1030, 1141, 1184
BstV2I	GAAGAC	3 cut(s)	93, 485, 696
BstX2I	RGATCY	1 cut(s)	1271
BstXI	CCANNNNNNTGG	1 cut(s)	14
BstYI	RGATCY	1 cut(s)	1271
BstZ17I	GTATAC	1 cut(s)	755
BsuI	GTATCC	2 cut(s)	1388, 1569
BsuRI	GGCC	2 cut(s)	970, 1594
BtgI	CCRYGG	2 cut(s)	395, 1296
BtsCI	GGATG	8 cut(s)	346, 441, 477, 597, 625, 717, 957, 1255
BtsI	GCAGTG	1 cut(s)	1696
BtsIMutI	CAGTG	7 cut(s)	52, 68, 336, 678, 693, 1406, 1696
CfoI	GCGC	1 cut(s)	1718
Cfr13I	GGNCC	4 cut(s)	318, 425, 1574, 1592
CseI	GACGC	2 cut(s)	98, 227
Csp6I	GTAC	2 cut(s)	817, 1190
CviAII	CATG	8 cut(s)	70, 396, 401, 488, 748, 758, 964, 1297
CviQI	GTAC	2 cut(s)	817, 1190
DdeI	CTNAG	2 cut(s)	1197, 1709
DinI	GGCGCC	1 cut(s)	1717
DpnI	GATC	6 cut(s)	142, 248, 829, 981, 1273, 1294
DpnII	GATC	6 cut(s)	140, 246, 827, 979, 1271, 1292
DrdI	GACNNNNNNGTC	1 cut(s)	1526
DseDI	GACNNNNNNGTC	1 cut(s)	1526
EaeI	YGGCCR	1 cut(s)	968
Eam1104I	CTCTTC	2 cut(s)	118, 1602
EarI	CTCTTC	2 cut(s)	118, 1602
Eco130I	CCWWGG	3 cut(s)	386, 395, 1296
Eco24I	GRGCYC	1 cut(s)	1080
Eco31I	GGTCTC	1 cut(s)	1310
Eco47I	GGWCC	3 cut(s)	318, 425, 1574
Eco57I	CTGAAG	1 cut(s)	99
Eco91I	GGTNACC	1 cut(s)	1544
EcoNI	CCTNNNNNAGG	1 cut(s)	1599
EcoO109I	RGGNCCY	2 cut(s)	318, 1592
EcoO65I	GGTNACC	1 cut(s)	1544
EcoRI	GAATTC	1 cut(s)	1005
EcoRII	CCWGG	1 cut(s)	1600
EcoT14I	CCWWGG	3 cut(s)	386, 395, 1296
EcoT22I	ATGCAT	2 cut(s)	75, 556
EcoT38I	GRGCYC	1 cut(s)	1080
EgeI	GGCGCC	1 cut(s)	1717
EheI	GGCGCC	1 cut(s)	1717
ErhI	CCWWGG	3 cut(s)	386, 395, 1296
FaeI	CATG	8 cut(s)	73, 399, 404, 491, 751, 761, 967, 1300
FaqI	GGGAC	1 cut(s)	297
FatI	CATG	8 cut(s)	69, 395, 400, 487, 747, 757, 963, 1296
FauNDI	CATATG	1 cut(s)	766
FblI	GTMKAC	1 cut(s)	754
Fnu4HI	GCNGC	8 cut(s)	392, 432, 461, 762, 786, 1019, 1155, 1173
FokI	GGATG	8 cut(s)	353, 428, 484, 604, 632, 724, 944, 1262
FriOI	GRGCYC	1 cut(s)	1080
Fsp4HI	GCNGC	8 cut(s)	392, 432, 461, 762, 786, 1019, 1155, 1173
GlaI	GCGC	1 cut(s)	1717
GluI	GCNGC	8 cut(s)	392, 432, 461, 762, 786, 1019, 1155, 1173
GsaI	CCCAGC	1 cut(s)	160
GsuI	CTGGAG	2 cut(s)	717, 1525
HaeII	RGCGCY	1 cut(s)	1719
HaeIII	GGCC	2 cut(s)	970, 1594
HapII	CCGG	2 cut(s)	299, 1562
HgaI	GACGC	2 cut(s)	98, 227
HhaI	GCGC	1 cut(s)	1718
Hin1I	GRCGYC	1 cut(s)	1716
Hin1II	CATG	8 cut(s)	73, 399, 404, 491, 751, 761, 967, 1300
Hin6I	GCGC	1 cut(s)	1716
HinP1I	GCGC	1 cut(s)	1716
HindIII	AAGCTT	1 cut(s)	630
HinfI	GANTC	6 cut(s)	110, 662, 1459, 1507, 1645, 1672
HpaII	CCGG	2 cut(s)	299, 1562
HphI	GGTGA	6 cut(s)	439, 869, 989, 1505, 1538, 1717
Hpy166II	GTNNAC	5 cut(s)	217, 334, 755, 1097, 1376
Hpy188I	TCNGA	5 cut(s)	201, 906, 1127, 1200, 1310
Hpy8I	GTNNAC	5 cut(s)	217, 334, 755, 1097, 1376
Hpy99I	CGWCG	2 cut(s)	99, 1526
HpyAV	CCTTC	4 cut(s)	968, 1007, 1295, 1534
HpyCH4III	ACNGT	6 cut(s)	56, 208, 413, 1094, 1410, 1588
HpyCH4IV	ACGT	5 cut(s)	97, 286, 325, 1524, 1623
HpyF10VI	GCNNNNNNNGC	4 cut(s)	397, 406, 782, 1331
HpyF3I	CTNAG	2 cut(s)	1197, 1709
HpySE526I	ACGT	5 cut(s)	97, 286, 325, 1524, 1623
Hsp92I	GRCGYC	1 cut(s)	1716
Hsp92II	CATG	8 cut(s)	73, 399, 404, 491, 751, 761, 967, 1300
HspAI	GCGC	1 cut(s)	1716
KasI	GGCGCC	1 cut(s)	1715
Kpn2I	TCCGGA	1 cut(s)	298
Kzo9I	GATC	6 cut(s)	140, 246, 827, 979, 1271, 1292
LmnI	GCTCC	1 cut(s)	301
Lsp1109I	GCAGC	8 cut(s)	403, 418, 472, 772, 773, 1030, 1141, 1184
LweI	GCATC	3 cut(s)	214, 541, 1141
MaeII	ACGT	5 cut(s)	97, 286, 325, 1524, 1623
MaeIII	GTNAC	4 cut(s)	350, 1404, 1528, 1544
MalI	GATC	6 cut(s)	142, 248, 829, 981, 1273, 1294
MboI	GATC	6 cut(s)	140, 246, 827, 979, 1271, 1292
MboII	GAAGA	7 cut(s)	98, 105, 485, 701, 1448, 1589, 1681
MfeI	CAATTG	1 cut(s)	657
MflI	RGATCY	1 cut(s)	1271
MhlI	GDGCHC	3 cut(s)	336, 1080, 1586
MlsI	TGGCCA	1 cut(s)	970
MluNI	TGGCCA	1 cut(s)	970
Mly113I	GGCGCC	1 cut(s)	1716
MlyI	GAGTC	4 cut(s)	104, 1468, 1516, 1654
MmeI	TCCRAC	3 cut(s)	241, 1601, 1634
Mox20I	TGGCCA	1 cut(s)	970
Mph1103I	ATGCAT	2 cut(s)	75, 556
MroI	TCCGGA	1 cut(s)	298
MroXI	GAANNNNTTC	1 cut(s)	1470
MscI	TGGCCA	1 cut(s)	970
MseI	TTAA	5 cut(s)	30, 105, 237, 557, 1166
MslI	CAYNNNNRTG	4 cut(s)	78, 339, 962, 1535
Msp20I	TGGCCA	1 cut(s)	970
MspA1I	CMGCKG	1 cut(s)	431
MspI	CCGG	2 cut(s)	299, 1562
MspR9I	CCNGG	1 cut(s)	1602
MunI	CAATTG	1 cut(s)	657
Mva1269I	GAATGC	1 cut(s)	304
MvaI	CCWGG	1 cut(s)	1602
MwoI	GCNNNNNNNGC	4 cut(s)	397, 406, 782, 1331
NarI	GGCGCC	1 cut(s)	1716
NcoI	CCATGG	2 cut(s)	395, 1296
NdeI	CATATG	1 cut(s)	766
NdeII	GATC	6 cut(s)	140, 246, 827, 979, 1271, 1292
NlaIII	CATG	8 cut(s)	73, 399, 404, 491, 751, 761, 967, 1300
NlaIV	GGNNCC	3 cut(s)	603, 1593, 1717
NmeAIII	GCCGAG	1 cut(s)	1629
NmuCI	GTSAC	3 cut(s)	1404, 1528, 1544
NsiI	ATGCAT	2 cut(s)	75, 556
NspI	RCATGY	1 cut(s)	761
PctI	GAATGC	1 cut(s)	304
PdmI	GAANNNNTTC	1 cut(s)	1470
PfeI	GAWTC	2 cut(s)	662, 1672
PflFI	GACNNNGTC	1 cut(s)	1526
PflMI	CCANNNNNTGG	1 cut(s)	1625
PkrI	GCNGC	8 cut(s)	393, 433, 462, 763, 787, 1020, 1156, 1174
PleI	GAGTC	4 cut(s)	104, 1467, 1515, 1653
PluTI	GGCGCC	1 cut(s)	1719
PpsI	GAGTC	4 cut(s)	104, 1467, 1515, 1653
PpuMI	RGGWCCY	1 cut(s)	318
PshBI	ATTAAT	1 cut(s)	557
Psp5II	RGGWCCY	1 cut(s)	318
Psp6I	CCWGG	1 cut(s)	1600
PspEI	GGTNACC	1 cut(s)	1544
PspFI	CCCAGC	1 cut(s)	156
PspGI	CCWGG	1 cut(s)	1600
PspN4I	GGNNCC	3 cut(s)	603, 1593, 1717
PspPI	GGNCC	4 cut(s)	318, 425, 1574, 1592
PspPPI	RGGWCCY	1 cut(s)	318
PsuI	RGATCY	1 cut(s)	1271
PsyI	GACNNNGTC	1 cut(s)	1526
PvuII	CAGCTG	1 cut(s)	431
RsaI	GTAC	2 cut(s)	818, 1191
RsaNI	GTAC	2 cut(s)	817, 1190
RseI	CAYNNNNRTG	4 cut(s)	78, 339, 962, 1535
SaqAI	TTAA	5 cut(s)	30, 105, 237, 557, 1166
SatI	GCNGC	8 cut(s)	392, 432, 461, 762, 786, 1019, 1155, 1173
Sau3AI	GATC	6 cut(s)	140, 246, 827, 979, 1271, 1292
Sau96I	GGNCC	4 cut(s)	318, 425, 1574, 1592
ScaI	AGTACT	2 cut(s)	818, 1191
SchI	GAGTC	4 cut(s)	104, 1468, 1516, 1654
ScrFI	CCNGG	1 cut(s)	1602
SduI	GDGCHC	3 cut(s)	336, 1080, 1586
SfaNI	GCATC	3 cut(s)	214, 541, 1141
SfoI	GGCGCC	1 cut(s)	1717
SinI	GGWCC	3 cut(s)	318, 425, 1574
SmiMI	CAYNNNNRTG	4 cut(s)	78, 339, 962, 1535
SmlI	CTYRAG	3 cut(s)	610, 1369, 1553
SmoI	CTYRAG	3 cut(s)	610, 1369, 1553
SspDI	GGCGCC	1 cut(s)	1715
StyD4I	CCNGG	1 cut(s)	1600
StyI	CCWWGG	3 cut(s)	386, 395, 1296
TaaI	ACNGT	6 cut(s)	56, 208, 413, 1094, 1410, 1588
TaiI	ACGT	5 cut(s)	100, 289, 328, 1527, 1626
TaqI	TCGA	4 cut(s)	94, 139, 365, 1080
TatI	WGTACW	2 cut(s)	816, 1189
TfiI	GAWTC	2 cut(s)	662, 1672
Tru1I	TTAA	5 cut(s)	30, 105, 237, 557, 1166
Tru9I	TTAA	5 cut(s)	30, 105, 237, 557, 1166
TscAI	CASTG	7 cut(s)	59, 68, 336, 678, 700, 1413, 1696
TseFI	GTSAC	3 cut(s)	1404, 1528, 1544
TseI	GCWGC	8 cut(s)	391, 431, 460, 761, 785, 1018, 1154, 1172
Tsp45I	GTSAC	3 cut(s)	1404, 1528, 1544
TspDTI	ATGAA	4 cut(s)	728, 1059, 1269, 1553
TspGWI	ACGGA	3 cut(s)	641, 770, 1395
TspRI	CASTG	7 cut(s)	59, 68, 336, 678, 700, 1413, 1696
Tth111I	GACNNNGTC	1 cut(s)	1526
Van91I	CCANNNNNTGG	1 cut(s)	1625
VneI	GTGCAC	1 cut(s)	332
VpaK11BI	GGWCC	3 cut(s)	318, 425, 1574
VspI	ATTAAT	1 cut(s)	557
XagI	CCTNNNNNAGG	1 cut(s)	1599
XapI	RAATTY	4 cut(s)	573, 582, 1005, 1111
XceI	RCATGY	1 cut(s)	761
XcmI	CCANNNNNNNNNTGG	2 cut(s)	393, 821
XmiI	GTMKAC	1 cut(s)	754
XmnI	GAANNNNTTC	1 cut(s)	1470
ZrmI	AGTACT	2 cut(s)	818, 1191
Zsp2I	ATGCAT	2 cut(s)	75, 556

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.