MD06G1158200.v1.1

callose synthase

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
29976913 .. 29999748
22836 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1158200.v1.1.491

Sequence Viewer

Length: 5640 bp
ATGGCTAGGGTTTACGACAATTGGAAGCGGCTGGTGCGGGCCACGCTAAAGCGGGAGCAGCTCAGGAGCTCCGGCCAGGGCCATGAGAGGGTTCCTAGTGGAATCGCCGGCGCCGTCCCGCCGTCGCTCGGGAAGACCACCAATATCGATGCGATCTTACAAGCTGCCGACGCGATTCAAGCTGAGGACCCCAACGTCTCCAGAATTTTGTGTGAGCAGGCATATAGTATGGCGCAAAATCTGGATCCGAAAAGTGATGGCAGAGGCGTTCTTCAGTTTAAGACTGGATTGATGTCTGTAATCAAGCAAAAACTTGCAAAAAAAGATGGGGGTCAAATAGATCGGAATCGTGATATTGAGCACCTCTGGGATTTTTACCAGCGATACAAGCGACGACATAGAGTCGATGATATCCAGAAACAGGAACAAAGATGGCGTGAATCTGGAACTTTTAGTGCTGACTTTGGCGATTATTTAGAAATGAAAAAGACAATTGCTACCTTGAGAGCTTTAGTTGAGGTGATGGAGGCACTTAGCAAGGATGCTGATCCTAATGGAGTTGGAAGACTTATTACAGAGGAGTTGCGAAAAGTTAAAAACACCGGTGCAACATTATCTGGGGAGCTTACAGCCTACAACATTGTCCCTCTAGAAGCACCATCATTGACCAATGCAATTGGAGTTTTCCCAGAAGTTAGAGGTGCAATATCTGCACTTAGGTATACCGAGGAATTCCCCAGACTTCCTGCTGATTTTGAGATATCTGGACAACGAGCTGCGGACATGTTTGATCTTCTGGAATGTGTGTTTGGTTTTCAGAAAGACAATGTAAGGAACCAGAGAGAGAATGTTGTTCTAACAATTGCAAATGCACAATCTCGGCTTGGTATACCTGGTTCGGCTGATCCAAAAGTAGACGAGAAAGCAATAAATGAGGTATTTCTGAAAGTTCTGGATAATTATATAAAATGGTGCAAATACCTGCGGATACGCCTTGCATGGAATAGTTTACAAGCAATTGATCAGGACAGGAAACTTTTTCTGGTTTCCTTGTACTTTCTGATATGGGGTGAAGCTGCAAATGTCCGCTTTCTTCCTGAATGTATTTGCTACATATTTCACCATATGGCTAAAGAGTTAGATGCAATATTAGATCATGGAGAAGCTAATCCCGCTGCCAGCTGCAGAACAGAGTCTGGATCTGTGTCCTTCCTTGATCAAATCATTTTTCCAATATATGAAACATTGGCTGCGGAAGCTGCCAGAAACAATAACGGGAAAGCTGCACATTCAGCATGGAGGAATTATGATGACTTTAATGAATACTTTTGGTCACCTGCTTGTTTTGGATTGAGCTGGCCTATGAGGAGGGATTCACCGTTTTTGTTGAAACCTAAAAAGGGAAAAAGGACCGGAAAAAGCACTTTCGTTGAGCATCGGACCTTTTTTCACTTGTATCGAAGTTTCCATCGCCTGTGGATCTTTTTAGCTTTGATGTTCCAGGCCTTGGCAATTATAGCCTTTAATAAAGGACGCATCAATTTGGATACTATTAAGACAGTCCTTAGCATTGGGCCAACTTTTGCCATCATGAGCTTCATAGAGAGTTTTTTGGATGTGGTGCTCATGTTTGGAGCTTACACCACAGCCAGAGCCATGGCTATCTCCAGACTTGTGATTAGATTTTTCTGGTTTGGCTTGAGCTCTGTTGCTGTGACATATATCTACCTGAAAGTTCTGCAGGAAAGAAATGACAGAAACTCCGATTCATTTTACTTTCGGATATATATTCTTGTATTGGGTGTTTATGCAGCTTTGCGCATATGCCTTGCGCTATTGCTTAAGTTTCCGGGATGTCATAAAATTTCTGAGATGTCTGATCAATCCTTCTTCCAATTTTTTAAGTGGATTTATCAGGCAAGTACTATTTTTCTTGGTTTGAAATGGAGCGTTACTTTGTTGGACGTGATTAAACCTCTTGTTGAACCCACAAAAATTATTGTGAACCTTCCATCTCTGCAATACGCATGGCATGATTTGGTGTCAAAGAACAACCATAACGCATTGACTGTAGCTTGCCTATGGGCTCCTGTTGTGGGTATCTATCTAATGGATTTTTACATATGGTACACCCTCCTGTCAGCCATAATTGGTGGTGTGATCGGTGCAAGAGCTCGGTTGGGCGAGATACGTTCGATTGAAATGGTGCATAAACGCTTTGAGAGTTTTCCAGAGGCTTTTGACAAGAATCTCGTCTCACAAAATAAAAGGTTGCCGTTTAACACTCAGTCATCCCAGGATTCTCAACATCCAAACAAGATGTATGCAGCCACGTTTTCGCCATTTTGGAATGAGATAATCAAAAGCTTGCGAGAGGAGGATTTTATTAGTAATAGGGAGATGGATTTGCTATGTATACCTAGCAACACAGGAAGTCTAAGATTAGTTCAATGGCCCCTGTTTCTTCTGAGTAGCAAGATTTTGCTGGCAATTGATTTGGCTTTGGACTGCAAAGATACACAGGCAGATCTTTGGAATAGAATCTGCAGGGATGAGTACATGGCATATGCAGTTCAGGAAGTCTACTATAGTATTGAAAAGATATTATATTCTCTGGTTGATGGTGAAGGGAGACTTTGGGTTGAAAGGATCTACCGCGAGATCAACAACAGCATTATGGAGGGTTCTCTCGTCATAACTTTAACCCTTAAGAAGCTTCCGCAGGTGTTACAGAAACTTACAGCTTTAACTGGGCTGCTGATACGCAATGAAACTGATGTACTTGCAAAGGGTGCTGCTAAATCTGTATTTGATCTGTATGAGGTTGTTACTCATGATCTTTTGTCATCTGATTTGAGGGAGCAGCTTGACACTTGGAGCCTTTTAGCAAAAGCAAGAAATGAAGGGCGCCTGTTTTCCAGGATAAAGTGGCCCAATGATCCAGAAACTAAAGAGCTGGTTAAGCGGTTACACCTTCTTGTCACTGTAAAGGATTCTGCGGCAAATGTTCCAAAAAATCTTGAAGCAAGGAGAAGATTAGAGTTTTTTACAAATTCATTGTTTATGGACATGCCTTCAGCAAAGCCAGTTAGTGAAATGGTTCCTTTCTGTGTCTTCACCCCGTACTACAGTGAGACGGTACTTTATAGTTCCTCTGAACTGCGAGTTGAAAATGAGGATGGAATATCAATTCTTTTTTATCTTCAGAAAATTTTTCCAGATGAGTGGGACAACTTTTTGGAACGGATTGGTCGGGGTGAGTCTACTGGGGATGCTGAGCTGCAAGAAAATTCAAGTGATTCTTTGGAGCTTCGGTTTTGGGTATCTTATCGTGGGCAGACGTTAGCCAGGACAGTGCGTGGTATGATGTATTATAGAAGGGCTTTAATGCTACAGAGTTTTCTGGAAAGAAGATCACTCGGAGTGGACGATTTTCCTCAAAATGATGTCTTCACAAGTCAAGGCTACGAGTTGTCATGTGAATCTCGAGCACAAGCAGATTTGAAATTTACTTACGTGGTGTCATGCCAAATTTATGGGCAACAAAAGCAGAGAAAGGCACTAGAGGCTGCTGATATATCCCTTTTGTTGCAGAGGAATGAGGCCCTTCGGGTTGCATATATACATGTGGAGGAGAGTGGTGCAATTGAAGGAAAGACCATAAAGGAATTTTATTCAAAGCTTGTAAAAGCTGATATACATGGAAAGGATCAGGAAATATACTCCATTAAACTTCCTGGTGATCCGAAGCTGGGTGAAGGGAAGCCTGAAAATCAAAACCATGCCATAATCTTCACTCGCGGGGAAGCTGTTCAGACTATTGACATGAACCAGGACAACTACCTTGAAGAGGCAATGAAAATGAGAAATCTTCTTGAGGAATTTCGCAGAAATCATGGTCTTCGACATCCAACTATTCTTGGTGTGAGAGAGCATGTATTTACTGGAAGTGTTTCATCTTTAGCATGGTTCATGTCCAATCAAGAGACTAGCTTTGTGACTTTAGCCCAACGAATTTTAGCATATCCTCTCAAAGTTCGCATGCACTATGGACACCCAGATGTGTTTGACCGAATTTTCCACACTACCCGAGGTGGGATTAGTAAATCGTCACGTGTTATCAATATAAGTGAAGATATTTTTGGAGGGTTCAACTCCACACTGAGGCAGGGTAACATTACACACCACGAATACATTCAGGTTGGAAAAGGAAGGGATGTTGGGTTAAACCAGATTGCATTGTTTGAAGGGAAAGTAGCAGGTGGAAATGGGGAGCAAGTCCTCAGTAGAGATGTGTACAGGATTGGGCAACTTTTTGATTTTTTCAGAATGTTCTCTTTCTTTTACACCACCGTTGGTTTCTACGTGTGTACAATGATGACCGTCCTTGTAGTATACATATTCTTGTACGGAAGGGCCTATCTGGCTTTCTCTGGACTTGATCGTGCCATTGCGAGGCAAGCAAAATTGTCGGGTAACGTAGCATTGGATGCTGTTCTCAATACACAATTCTTGGTCCAGATTGGAATTTTTACCGCAGTTCCAATGATTATGGGTTTTATACTTGAGTTGGGATTGCTGAAGGCGGTTTTCAGTTTTATCACAATGCAGCTTCAGTTATGTTCTGTGTTCTTCACGTTCTCATTGGGAACTAAAACTCACTATTTTGGGCGCACTATTCTCCATGGAGGCGCAAAATACCGAGCAACTGGTAGAGGCTTTGTTGTCAAGCACATAAAGTTTGCTGAGAATTACAGGCTCTACTCAAGGAGTCATTTTGTCAAAGCGTTTGAAGTGGCTCTACTTCTCATAGTTTACATTGCATATGGTTACGTAGATGGTGGTGCTGTTTCTTACATTTTGCTAACTCTCAGTAGTTGGTTCCTTGTCATCTCCTGGTTGTTTGCTCCCTATATCTTTAATCCGTCTGGTTTCGAGTGGCAAAAGACGGTGGAGGACTTTGATGATTGGACCGGTTGGCTTCTTTACAGAGGTGGGGTAGGAGTTAAGGGAGAGCATAGTTGGGAATCCTGGTGGGATGAGGAACAGATGCATATTCAAACGCTGAGAGGTCGTATATTGGAAACAATTTTGAGCTTGAGATTCTTCTTGTTTCAATATGGTGTTGTCTACAAACTCCATATCACTGCAAAGGACACATCACTTGCGATTTACGGATTCTCTTGGGTTGTATTGGTGACCATTGTCCTGATTTTCAAGGTTTTTAGTTACAGTCCCAAAAAGTCGGCCAACTTCCAGCTAGTGATGAGATTTGCACAGGGTGTGGCGGCCTTAGGACTTGTTGCGGTTATTGCTCTTCTTGTAATATTTACCGAACTCTCAATAGCTGACCTGTTCGCAAGCCTGCTCGCAATCATTCCTACCGGATGGGCAATATTATGCCTAGCGGTCACCTGGAAGAGGATCGTGAGGAGTCTAGGTTTATGGGACTCGGTGAGGGAGTTTGCCAGGATGTATGATGCCGGTATGGGGATGTTCATTTTCGCTCCTATAGCGTTCTTGTCCTGGTTCCCCTTCATCTCCACCTTCCAGTCTCGACTTCTCTTTAACCAAGCATTTAGCCGTGGGTTGGAAATATCACTCATCCTCGCCGGAAACAAAGCCAACGTTGACGTCTAA

Protein Analysis

1880

Amino Acids

214.58

Weight (kDa)

8.76

Isoelectric Point (pI)

39.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKS1_dom1 PF14288 345 - 453 1.4e-40 1,3-beta-glucan synthase subunit FKS1, domain-1
CALS1 PF25968 819 - 996 8.6e-48 Callose synthase 1 domain
Glucan_synthase PF02364 1003 - 1778 2.6e-230 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 1345, 2713, 4250
AasI GACNNNNNNGTC 1 cut(s) 194
AatII GACGTC 1 cut(s) 5637
Acc16I TGCGCA 1 cut(s) 1820
Acc36I ACCTGC 4 cut(s) 990, 1345, 2713, 4250
AccB1I GGYRCC 2 cut(s) 110, 2907
AccB7I CCANNNNNTGG 1 cut(s) 1507
AccI GTMKAC 8 cut(s) 722, 889, 915, 2416, 2583, 3263, 4395, 5130
AccII CGCG 3 cut(s) 173, 2658, 3801
AclI AACGTT 1 cut(s) 5628
AcoI YGGCCR 2 cut(s) 73, 5247
AcuI CTGAAG 5 cut(s) 257, 3060, 3188, 4598, 4601
AcvI CACGTG 1 cut(s) 4115
AcyI GRCGYC 3 cut(s) 111, 2908, 5634
AdeI CACNNNGTG 1 cut(s) 5282
AflII CTTAAG 2 cut(s) 1841, 2708
AflIII ACRYGT 4 cut(s) 783, 3625, 4114, 4365
AgeI ACCGGT 2 cut(s) 602, 4973
AhdI GACNNNNNGTC 1 cut(s) 401
AjiI CACGTC 1 cut(s) 1966
AjuI GAANNNNNNNTTGG 4 cut(s) 792, 824, 4125, 4157
Alw21I GWGCWC 6 cut(s) 71, 363, 1626, 1706, 2176, 3493
Alw26I GTCTC 6 cut(s) 202, 2260, 2626, 3128, 3980, 5559
AlwNI CAGNNNCTG 1 cut(s) 1196
Ama87I CYCGRG 3 cut(s) 128, 3486, 4089
AsiGI ACCGGT 2 cut(s) 602, 4973
Asp700I GAANNNNTTC 4 cut(s) 3099, 3810, 3952, 4194
AspLEI GCGC 7 cut(s) 113, 235, 1821, 1834, 2910, 4674, 4694
AsuC2I CCSGG 1 cut(s) 1851
AvaI CYCGRG 3 cut(s) 128, 3486, 4089
AvaII GGWCC 5 cut(s) 187, 1410, 1440, 4516, 4971
AxyI CCTNAGG 1 cut(s) 5293
BamHI GGATCC 1 cut(s) 244
BanI GGYRCC 2 cut(s) 110, 2907
BanII GRGCYC 4 cut(s) 71, 1706, 2089, 2176
BarI GAAGNNNNNNTAC 4 cut(s) 556, 588, 4785, 4817
BbrPI CACGTG 1 cut(s) 4115
BbsI GAAGAC 5 cut(s) 140, 571, 3106, 3442, 3893
Bbv12I GWGCWC 6 cut(s) 71, 363, 1626, 1706, 2176, 3493
BbvCI CCTCAGC 1 cut(s) 183
BceAI ACGGC 4 cut(s) 98, 106, 2260, 5568
BcgI CGANNNNNNTGC 2 cut(s) 4452, 4486
BciVI GTATCC 2 cut(s) 981, 1540
BclI TGATCA 3 cut(s) 1021, 1216, 1879
BcnI CCSGG 1 cut(s) 1851
BcoDI GTCTC 6 cut(s) 202, 2260, 2626, 3128, 3980, 5559
BfaI CTAG 9 cut(s) 6, 96, 650, 2421, 3563, 3990, 5261, 5405, 5438
BfmI CTRYAG 8 cut(s) 1183, 1739, 2070, 2545, 2587, 3127, 3392, 5511
BfoI RGCGCY 2 cut(s) 114, 2911
BfrI CTTAAG 2 cut(s) 1841, 2708
BfuAI ACCTGC 4 cut(s) 990, 1345, 2713, 4250
BfuI GTATCC 2 cut(s) 981, 1540
BglI GCCNNNNNGGC 1 cut(s) 4424
BglII AGATCT 1 cut(s) 2527
BlpI GCTNAGC 1 cut(s) 3276
BmcAI AGTACT 1 cut(s) 1924
Bme18I GGWCC 5 cut(s) 187, 1410, 1440, 4516, 4971
BmeRI GACNNNNNGTC 1 cut(s) 401
BmeT110I CYCGRG 3 cut(s) 128, 3486, 4089
BmgBI CACGTC 1 cut(s) 1966
BmrI ACTGGG 2 cut(s) 2760, 3276
BmsI GCATC 9 cut(s) 139, 532, 1132, 1444, 1545, 3262, 4480, 5040, 5470
BmuI ACTGGG 2 cut(s) 2760, 3276
BoxI GACNNNNGTC 1 cut(s) 5204
BpiI GAAGAC 5 cut(s) 140, 571, 3106, 3442, 3893
BpmI CTGGAG 2 cut(s) 184, 1651
Bpu10I CCTNAGC 3 cut(s) 62, 183, 1565
Bpu1102I GCTNAGC 1 cut(s) 3276
BpuEI CTTGAG 6 cut(s) 523, 1720, 3896, 4586, 4750, 5119
BpuMI CCSGG 1 cut(s) 1851
Bsa29I ATCGAT 1 cut(s) 147
BsaAI YACGTR 4 cut(s) 3517, 4115, 4366, 4834
BsaBI GATNNNNATC 2 cut(s) 345, 546
BsaHI GRCGYC 3 cut(s) 111, 2908, 5634
BsaJI CCNNGG 8 cut(s) 76, 726, 1506, 1656, 2295, 4090, 4684, 5584
BsaWI WCCGGW 4 cut(s) 602, 1412, 4973, 5384
BsaXI ACNNNNNCTCC 6 cut(s) 1745, 1775, 3299, 3329, 5425, 5455
Bse118I RCCGGY 4 cut(s) 107, 602, 4973, 5483
Bse1I ACTGG 7 cut(s) 289, 2755, 3086, 3271, 3949, 4714, 5551
Bse21I CCTNAGG 1 cut(s) 5293
Bse3DI GCAATG 4 cut(s) 2773, 3861, 4449, 4818
Bse8I GATNNNNATC 2 cut(s) 345, 546
BseCI ATCGAT 1 cut(s) 147
BseDI CCNNGG 8 cut(s) 76, 726, 1506, 1656, 2295, 4090, 4684, 5584
BseJI GATNNNNATC 2 cut(s) 345, 546
BseMI GCAATG 4 cut(s) 2773, 3861, 4449, 4818
BseNI ACTGG 7 cut(s) 289, 2755, 3086, 3271, 3949, 4714, 5551
BseRI GAGGAG 5 cut(s) 593, 1381, 2390, 3647, 5446
BseYI CCCAGC 1 cut(s) 3751
BsgI GTGCAG 2 cut(s) 696, 1269
Bsh1236I CGCG 3 cut(s) 173, 2658, 3801
BshNI GGYRCC 2 cut(s) 110, 2907
BshTI ACCGGT 2 cut(s) 602, 4973
BshVI ATCGAT 1 cut(s) 147
BsiHKAI GWGCWC 6 cut(s) 71, 363, 1626, 1706, 2176, 3493
BsiHKCI CYCGRG 3 cut(s) 128, 3486, 4089
BsiSI CCGG 9 cut(s) 72, 108, 603, 1413, 1850, 4974, 5385, 5484, 5613
BslFI GGGAC 5 cut(s) 101, 629, 3242, 5220, 5462
BsmAI GTCTC 6 cut(s) 202, 2260, 2626, 3128, 3980, 5559
BsmBI CGTCTC 3 cut(s) 202, 2260, 3128
BsmFI GGGAC 5 cut(s) 101, 629, 3242, 5220, 5462
BsoBI CYCGRG 3 cut(s) 128, 3486, 4089
Bsp1286I GDGCHC 7 cut(s) 71, 363, 1626, 1706, 2089, 2176, 3493
Bsp1407I TGTACA 2 cut(s) 4296, 4370
Bsp1720I GCTNAGC 1 cut(s) 3276
Bsp19I CCATGG 2 cut(s) 1656, 4684
BspDI ATCGAT 1 cut(s) 147
BspFNI CGCG 3 cut(s) 173, 2658, 3801
BspHI TCATGA 2 cut(s) 1590, 2833
BspMAI CTGCAG 3 cut(s) 1187, 1743, 2549
BspMI ACCTGC 4 cut(s) 990, 1345, 2713, 4250
BspQI GCTCTTC 1 cut(s) 5322
BspT107I GGYRCC 2 cut(s) 110, 2907
BspTI CTTAAG 2 cut(s) 1841, 2708
BsrDI GCAATG 4 cut(s) 2773, 3861, 4449, 4818
BsrFI RCCGGY 4 cut(s) 107, 602, 4973, 5483
BsrGI TGTACA 2 cut(s) 4296, 4370
BsrI ACTGG 7 cut(s) 289, 2755, 3086, 3271, 3949, 4714, 5551
BssAI RCCGGY 4 cut(s) 107, 602, 4973, 5483
BssECI CCNNGG 8 cut(s) 76, 726, 1506, 1656, 2295, 4090, 4684, 5584
BssNAI GTATAC 4 cut(s) 723, 890, 2417, 4396
BssNI GRCGYC 3 cut(s) 111, 2908, 5634
BssT1I CCWWGG 3 cut(s) 1506, 1656, 4684
Bst1107I GTATAC 4 cut(s) 723, 890, 2417, 4396
Bst6I CTCTTC 3 cut(s) 3843, 5322, 5414
BstACI GRCGYC 3 cut(s) 111, 2908, 5634
BstAFI CTTAAG 2 cut(s) 1841, 2708
BstAPI GCANNNNNTGC 3 cut(s) 710, 2792, 4490
BstAUI TGTACA 2 cut(s) 4296, 4370
BstBAI YACGTR 4 cut(s) 3517, 4115, 4366, 4834
BstDSI CCRYGG 3 cut(s) 1656, 4684, 5584
BstEII GGTNACC 3 cut(s) 1332, 5197, 5410
BstENI CCTNNNNNAGG 2 cut(s) 3848, 5419
BstFNI CGCG 3 cut(s) 173, 2658, 3801
BstH2I RGCGCY 2 cut(s) 114, 2911
BstHHI GCGC 7 cut(s) 113, 235, 1821, 1834, 2910, 4674, 4694
BstMAI GTCTC 6 cut(s) 202, 2260, 2626, 3128, 3980, 5559
BstNSI RCATGY 5 cut(s) 787, 3073, 3629, 3938, 4045
BstPAI GACNNNNGTC 1 cut(s) 5204
BstPI GGTNACC 3 cut(s) 1332, 5197, 5410
BstSFI CTRYAG 8 cut(s) 1183, 1739, 2070, 2545, 2587, 3127, 3392, 5511
BstSNI TACGTA 1 cut(s) 4834
BstUI CGCG 3 cut(s) 173, 2658, 3801
BstV2I GAAGAC 5 cut(s) 140, 571, 3106, 3442, 3893
BstX2I RGATCY 5 cut(s) 244, 1199, 1479, 2527, 2649
BstXI CCANNNNNNTGG 3 cut(s) 1657, 3225, 3536
BstYI RGATCY 5 cut(s) 244, 1199, 1479, 2527, 2649
BstZ17I GTATAC 4 cut(s) 723, 890, 2417, 4396
Bsu15I ATCGAT 1 cut(s) 147
Bsu36I CCTNAGG 1 cut(s) 5293
BsuI GTATCC 2 cut(s) 981, 1540
BsuTUI ATCGAT 1 cut(s) 147
BtgI CCRYGG 3 cut(s) 1656, 4684, 5584
BtgZI GCGATG 1 cut(s) 1454
BtrI CACGTC 1 cut(s) 1966
BtsI GCAGTG 1 cut(s) 5145
BtsIMutI CAGTG 5 cut(s) 2982, 3136, 3360, 4160, 5145
BveI ACCTGC 4 cut(s) 990, 1345, 2713, 4250
CaiI CAGNNNCTG 1 cut(s) 1196
CciI TCATGA 2 cut(s) 1590, 2833
CfoI GCGC 7 cut(s) 113, 235, 1821, 1834, 2910, 4674, 4694
Cfr10I RCCGGY 4 cut(s) 107, 602, 4973, 5483
ClaI ATCGAT 1 cut(s) 147
CseI GACGC 2 cut(s) 179, 1542
CsiI ACCWGGT 1 cut(s) 892
CspAI ACCGGT 2 cut(s) 602, 4973
DinI GGCGCC 2 cut(s) 112, 2909
DraIII CACNNNGTG 1 cut(s) 5282
DrdI GACNNNNNNGTC 1 cut(s) 194
DriI GACNNNNNGTC 1 cut(s) 401
DseDI GACNNNNNNGTC 1 cut(s) 194
EaeI YGGCCR 2 cut(s) 73, 5247
Eam1104I CTCTTC 3 cut(s) 3843, 5322, 5414
Eam1105I GACNNNNNGTC 1 cut(s) 401
EarI CTCTTC 3 cut(s) 3843, 5322, 5414
Ecl136II GAGCTC 3 cut(s) 69, 1704, 2174
Eco105I TACGTA 1 cut(s) 4834
Eco130I CCWWGG 3 cut(s) 1506, 1656, 4684
Eco147I AGGCCT 1 cut(s) 1505
Eco24I GRGCYC 4 cut(s) 71, 1706, 2089, 2176
Eco32I GATATC 2 cut(s) 412, 762
Eco47I GGWCC 5 cut(s) 187, 1410, 1440, 4516, 4971
Eco53kI GAGCTC 3 cut(s) 69, 1704, 2174
Eco57I CTGAAG 5 cut(s) 257, 3060, 3188, 4598, 4601
Eco72I CACGTG 1 cut(s) 4115
Eco81I CCTNAGG 1 cut(s) 5293
Eco88I CYCGRG 3 cut(s) 128, 3486, 4089
Eco91I GGTNACC 3 cut(s) 1332, 5197, 5410
EcoICRI GAGCTC 3 cut(s) 69, 1704, 2174
EcoNI CCTNNNNNAGG 2 cut(s) 3848, 5419
EcoO109I RGGNCCY 3 cut(s) 187, 3604, 4416
EcoO65I GGTNACC 3 cut(s) 1332, 5197, 5410
EcoRI GAATTC 1 cut(s) 731
EcoRV GATATC 2 cut(s) 412, 762
EcoT14I CCWWGG 3 cut(s) 1506, 1656, 4684
EcoT22I ATGCAT 1 cut(s) 5055
EcoT38I GRGCYC 4 cut(s) 71, 1706, 2089, 2176
EgeI GGCGCC 2 cut(s) 112, 2909
EheI GGCGCC 2 cut(s) 112, 2909
ErhI CCWWGG 3 cut(s) 1506, 1656, 4684
Esp3I CGTCTC 3 cut(s) 202, 2260, 3128
FalI AAGNNNNNCTT 4 cut(s) 2619, 2651, 3286, 3318
FaqI GGGAC 5 cut(s) 101, 629, 3242, 5220, 5462
FauI CCCGC 5 cut(s) 30, 45, 126, 1180, 3794
FauNDI CATATG 5 cut(s) 1125, 1823, 2123, 2566, 4825
FbaI TGATCA 3 cut(s) 1021, 1216, 1879
FblI GTMKAC 8 cut(s) 722, 889, 915, 2416, 2583, 3263, 4395, 5130
FriOI GRGCYC 4 cut(s) 71, 1706, 2089, 2176
FspBI CTAG 9 cut(s) 6, 96, 650, 2421, 3563, 3990, 5261, 5405, 5438
FspI TGCGCA 1 cut(s) 1820
GlaI GCGC 7 cut(s) 112, 234, 1820, 1833, 2909, 4673, 4693
GsaI CCCAGC 1 cut(s) 3755
GsuI CTGGAG 2 cut(s) 184, 1651
HaeII RGCGCY 2 cut(s) 114, 2911
HapII CCGG 9 cut(s) 72, 108, 603, 1413, 1850, 4974, 5385, 5484, 5613
HgaI GACGC 2 cut(s) 179, 1542
HhaI GCGC 7 cut(s) 113, 235, 1821, 1834, 2910, 4674, 4694
Hin1I GRCGYC 3 cut(s) 111, 2908, 5634
Hin6I GCGC 7 cut(s) 111, 233, 1819, 1832, 2908, 4672, 4692
HinP1I GCGC 7 cut(s) 111, 233, 1819, 1832, 2908, 4672, 4692
HincII GTYRAC 1 cut(s) 5632
HindII GTYRAC 1 cut(s) 5632
HindIII AAGCTT 3 cut(s) 2365, 2714, 3680
HpaII CCGG 9 cut(s) 72, 108, 603, 1413, 1850, 4974, 5385, 5484, 5613
Hpy99I CGWCG 3 cut(s) 127, 173, 396
Hsp92I GRCGYC 3 cut(s) 111, 2908, 5634
HspAI GCGC 7 cut(s) 111, 233, 1819, 1832, 2908, 4672, 4692
KasI GGCGCC 2 cut(s) 110, 2907
KroI GCCGGC 1 cut(s) 107
KroNI GCCGGC 1 cut(s) 109
Ksp22I TGATCA 3 cut(s) 1021, 1216, 1879
LguI GCTCTTC 1 cut(s) 5322
LweI GCATC 9 cut(s) 139, 532, 1132, 1444, 1545, 3262, 4480, 5040, 5470
MabI ACCWGGT 1 cut(s) 892
MaeI CTAG 9 cut(s) 6, 96, 650, 2421, 3563, 3990, 5261, 5405, 5438
MfeI CAATTG 7 cut(s) 19, 492, 675, 861, 1017, 2490, 3645
MflI RGATCY 5 cut(s) 244, 1199, 1479, 2527, 2649
MhlI GDGCHC 7 cut(s) 71, 363, 1626, 1706, 2089, 2176, 3493
Mly113I GGCGCC 2 cut(s) 111, 2908
MlyI GAGTC 6 cut(s) 411, 1202, 3269, 4780, 5443, 5444
MmeI TCCRAC 5 cut(s) 541, 1941, 3935, 4183, 5571
Mph1103I ATGCAT 1 cut(s) 5055
MreI CGCCGGCG 1 cut(s) 107
MroNI GCCGGC 1 cut(s) 107
MroXI GAANNNNTTC 4 cut(s) 3099, 3810, 3952, 4194
MslI CAYNNNNRTG 1 cut(s) 4059
MspA1I CMGCKG 2 cut(s) 1175, 1182
MspCI CTTAAG 2 cut(s) 1841, 2708
MspI CCGG 9 cut(s) 72, 108, 603, 1413, 1850, 4974, 5385, 5484, 5613
MunI CAATTG 7 cut(s) 19, 492, 675, 861, 1017, 2490, 3645
MvnI CGCG 3 cut(s) 173, 2658, 3801
NaeI GCCGGC 1 cut(s) 109
NarI GGCGCC 2 cut(s) 111, 2908
NciI CCSGG 1 cut(s) 1851
NcoI CCATGG 2 cut(s) 1656, 4684
NdeI CATATG 5 cut(s) 1125, 1823, 2123, 2566, 4825
NgoMIV GCCGGC 1 cut(s) 107
NmeAIII GCCGAG 1 cut(s) 859
NmuCI GTSAC 7 cut(s) 1332, 1714, 2980, 3997, 4110, 5197, 5410
NsbI TGCGCA 1 cut(s) 1820
NsiI ATGCAT 1 cut(s) 5055
NspI RCATGY 5 cut(s) 787, 3073, 3629, 3938, 4045
PaeI GCATGC 1 cut(s) 4045
PaeR7I CTCGAG 1 cut(s) 3486
PagI TCATGA 2 cut(s) 1590, 2833
PaqCI CACCTGC 3 cut(s) 1345, 2713, 4250
PceI AGGCCT 1 cut(s) 1505
PciI ACATGT 2 cut(s) 783, 3625
PciSI GCTCTTC 1 cut(s) 5322
PcsI WCGNNNNNNNCGW 2 cut(s) 111, 3426
PdiI GCCGGC 1 cut(s) 109
PdmI GAANNNNTTC 4 cut(s) 3099, 3810, 3952, 4194
PflMI CCANNNNNTGG 1 cut(s) 1507
PfoI TCCNGGA 2 cut(s) 1849, 2918
PinAI ACCGGT 2 cut(s) 602, 4973
PleI GAGTC 6 cut(s) 410, 1201, 3268, 4779, 5442, 5444
PluTI GGCGCC 2 cut(s) 114, 2911
PmaCI CACGTG 1 cut(s) 4115
PmlI CACGTG 1 cut(s) 4115
PpsI GAGTC 6 cut(s) 410, 1201, 3268, 4779, 5442, 5444
Ppu21I YACGTR 4 cut(s) 3517, 4115, 4366, 4834
PpuMI RGGWCCY 1 cut(s) 187
PscI ACATGT 2 cut(s) 783, 3625
PshAI GACNNNNGTC 1 cut(s) 5204
Psp124BI GAGCTC 3 cut(s) 71, 1706, 2176
Psp1406I AACGTT 1 cut(s) 5628
Psp5II RGGWCCY 1 cut(s) 187
PspCI CACGTG 1 cut(s) 4115
PspEI GGTNACC 3 cut(s) 1332, 5197, 5410
PspFI CCCAGC 1 cut(s) 3751
PspPPI RGGWCCY 1 cut(s) 187
PsrI GAACNNNNNNTAC 2 cut(s) 880, 912
PstI CTGCAG 3 cut(s) 1187, 1743, 2549
PstNI CAGNNNCTG 1 cut(s) 1196
PsuI RGATCY 5 cut(s) 244, 1199, 1479, 2527, 2649
PvuII CAGCTG 1 cut(s) 1182
RseI CAYNNNNRTG 1 cut(s) 4059
SacI GAGCTC 3 cut(s) 71, 1706, 2176
SapI GCTCTTC 1 cut(s) 5322
ScaI AGTACT 1 cut(s) 1924
SchI GAGTC 6 cut(s) 411, 1202, 3269, 4780, 5443, 5444
SduI GDGCHC 7 cut(s) 71, 363, 1626, 1706, 2089, 2176, 3493
SexAI ACCWGGT 1 cut(s) 892
SfaNI GCATC 9 cut(s) 139, 532, 1132, 1444, 1545, 3262, 4480, 5040, 5470
SfcI CTRYAG 8 cut(s) 1183, 1739, 2070, 2545, 2587, 3127, 3392, 5511
SfoI GGCGCC 2 cut(s) 112, 2909
Sfr274I CTCGAG 1 cut(s) 3486
SgrAI CRCCGGYG 2 cut(s) 107, 602
SinI GGWCC 5 cut(s) 187, 1410, 1440, 4516, 4971
SlaI CTCGAG 1 cut(s) 3486
SmiMI CAYNNNNRTG 1 cut(s) 4059
SmlI CTYRAG 9 cut(s) 502, 1699, 1841, 2708, 3486, 3875, 4565, 4765, 5098
SmoI CTYRAG 9 cut(s) 502, 1699, 1841, 2708, 3486, 3875, 4565, 4765, 5098
SnaBI TACGTA 1 cut(s) 4834
SphI GCATGC 1 cut(s) 4045
SseBI AGGCCT 1 cut(s) 1505
SspDI GGCGCC 2 cut(s) 110, 2907
SspI AATATT 3 cut(s) 1149, 5328, 5397
SspMI CTAG 9 cut(s) 6, 96, 650, 2421, 3563, 3990, 5261, 5405, 5438
SstI GAGCTC 3 cut(s) 71, 1706, 2176
StuI AGGCCT 1 cut(s) 1505
StyI CCWWGG 3 cut(s) 1506, 1656, 4684
TaqI TCGA 8 cut(s) 147, 405, 1459, 2195, 3487, 3904, 4935, 5557
TaqII GACCGA 1 cut(s) 4086
TatI WGTACW 6 cut(s) 1053, 1922, 2556, 2779, 4296, 4370
TauI GCSGC 3 cut(s) 31, 3002, 5291
TscAI CASTG 5 cut(s) 2989, 3136, 3360, 4167, 5152
TseFI GTSAC 7 cut(s) 1332, 1714, 2980, 3997, 4110, 5197, 5410
Tsp45I GTSAC 7 cut(s) 1332, 1714, 2980, 3997, 4110, 5197, 5410
TspGWI ACGGA 4 cut(s) 3259, 4425, 4914, 5190
TspRI CASTG 5 cut(s) 2989, 3136, 3360, 4167, 5152
Van91I CCANNNNNTGG 1 cut(s) 1507
Vha464I CTTAAG 2 cut(s) 1841, 2708
VpaK11BI GGWCC 5 cut(s) 187, 1410, 1440, 4516, 4971
XagI CCTNNNNNAGG 2 cut(s) 3848, 5419
XbaI TCTAGA 1 cut(s) 649
XceI RCATGY 5 cut(s) 787, 3073, 3629, 3938, 4045
XhoI CTCGAG 1 cut(s) 3486
XmiI GTMKAC 8 cut(s) 722, 889, 915, 2416, 2583, 3263, 4395, 5130
XmnI GAANNNNTTC 4 cut(s) 3099, 3810, 3952, 4194
XspI CTAG 9 cut(s) 6, 96, 650, 2421, 3563, 3990, 5261, 5405, 5438
ZraI GACGTC 1 cut(s) 5635
ZrmI AGTACT 1 cut(s) 1924
Zsp2I ATGCAT 1 cut(s) 5055
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.