Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0002438

Physical Location & Seq

Genomic Coordinates Forward (+)

15172207 .. 15174544

Gene Structure 2338 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G181200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 813 bp

ATGGCTAGGGTTTACGACAATTGGGAGCGGCTGGTGCGGGCCACACTAATGATTGAGCAGCTCAGAAGTTCCGGCCAAGGCCACGAGAGGGTTCCTAGTGGAATCGCCGGCGCTGTCCCACCATCGCTGGGAAAGACCACGAACATCGATGCGATCTTACAAGCTGCCGATGCGATTTATGCTGAGGACCCCAACCAAAAATTTGCAAAAAGAGATGGGGGTCAAATAGATCGTAATCGTGATATTGAGCACCCTTGGGACTTTTACCAGCGGTACAAACGACGACATAAAGTAGATGATATCCAGAGACAGGAACAAAGATGGCGTGAATCTGGAACTTTTAGTGCTGACTTTGGCGATTATTTAGAAATGAAAAAGATGATTGCTACCTTGAGGGCTTTAGTTGAGGTGATGGAGGCACTTAGCAAATATGCAGATCCAAATGGAGTTGGAAGACTTATTATGGAGGAGGTGAGAGGTGCAATATCTGCAATTAGGTATACTGAGCAATTCCCCAGACTTCCTGCTGCTATTGAGATATCTGGACAACGAGATGCTGACATGTTTGATCTGTTGGAATGTGTGTTTGGTTTTCAGAAAGACAATGTAACGAATCAGAGAGAAAATGTTCTTCTTACAGTTGCAAATGCACAATCTCAGCTTGGTGTACCTGTTGAGGCTGATCCAGTGAGTGAACATGTCATTATTGTTACATGGGCTACTGATTATCCTTCTTGTATTCATGTGAATGAACATGTCATTATTTGTTACACCTGTTACGTTTCCATTTACTTAAATCTAAATTTTGAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005886 GO:0005911 GO:0007049 GO:0007275 GO:0008150 GO:0009506 GO:0009555 GO:0009556 GO:0009987 GO:0012505 GO:0016020 GO:0019953 GO:0022402 GO:0022414 GO:0030054 GO:0032501 GO:0032502 GO:0034293 GO:0040007 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043934 GO:0044424 GO:0044444 GO:0044464 GO:0044703 GO:0048229 GO:0048236 GO:0048589 GO:0048856 GO:0048869 GO:0051321 GO:0051704 GO:0055044 GO:0071944 GO:1903046

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKS1_dom1 Glucan_synthase

Protein Analysis

271

Amino Acids

30.79

Weight (kDa)

5.26

Isoelectric Point (pI)

46.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002438)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G36850
fragaria_vesca	FvH4_5g07240
malus_domestica	MD06G1158200.v1.1 MD14G1164600.v1.1 MD14G1164700.v1.1 MD14G1164800.v1.1
prunus_persica	Prupe.5G158100_v2.0.a1 Prupe.5G158100_v2.0.a1 Prupe.5G181200_v2.0.a1
pyrus_communis	pycom06g14110 pycom06g14120 pycom06g14130 pycom14g13740
rosa_chinensis	RchiOBHm_Chr3g0493651 RchiOBHm_Chr7g0191411 RchiOBHm_Chr7g0191641
rosa_laevigata	RLG00000004437 RLG00000004438 RLG00000004457
rosa_multiflora	Rmu_sc0001123.1_g000007 Rmu_sc0002661.1_g000007 Rmu_sc0003634.1_g000001 Rmu_sc0003634.1_g000002
rosa_roxburghii	Rroxscaffold_157G00438350 Rroxscaffold_157G00438470 Rroxscaffold_2G00133560 Rroxscaffold_3G00263680 Rroxscaffold_3G00263840
rosa_rugosa	Rorug06G0510400 Rorug06G0510600
rosa_samantha	Rh7AG118000 Rh7AG119400 Rh7AG119500 Rh7BG120100 Rh7BG121600 Rh7BG121700 Rh7CG122900 Rh7CG124400 Rh7DG121000 Rh7DG122500
rosa_wichuraiana	Rw7G010190

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	28
AccI	GTMKAC	1 cut(s)	500
AciI	CCGC	3 cut(s)	28, 37, 271
AclWI	GGATC	2 cut(s)	431, 677
AcoI	YGGCCR	1 cut(s)	73
AcsI	RAATTY	2 cut(s)	200, 802
AfaI	GTAC	2 cut(s)	275, 669
AfiI	CCNNNNNNNGG	3 cut(s)	88, 128, 310
AflIII	ACRYGT	3 cut(s)	561, 697, 754
AjuI	GAANNNNNNNTTGG	2 cut(s)	570, 602
AluBI	AGCT	3 cut(s)	61, 164, 661
AluI	AGCT	3 cut(s)	61, 164, 661
Alw21I	GWGCWC	1 cut(s)	252
Alw26I	GTCTC	1 cut(s)	301
AlwI	GGATC	2 cut(s)	431, 677
AoxI	GGCC	3 cut(s)	39, 73, 79
ApeKI	GCWGC	3 cut(s)	58, 164, 527
ApoI	RAATTY	2 cut(s)	200, 802
Asp700I	GAANNNNTTC	1 cut(s)	627
AspLEI	GCGC	1 cut(s)	113
AspS9I	GGNCC	2 cut(s)	39, 187
AsuHPI	GGTGA	2 cut(s)	421, 484
AvaII	GGWCC	1 cut(s)	187
BauI	CACGAG	1 cut(s)	83
BbsI	GAAGAC	1 cut(s)	460
Bbv12I	GWGCWC	1 cut(s)	252
BbvCI	CCTCAGC	1 cut(s)	183
BbvI	GCAGC	3 cut(s)	70, 151, 514
BccI	CCATC	4 cut(s)	130, 209, 315, 406
BcoDI	GTCTC	1 cut(s)	301
BfaI	CTAG	2 cut(s)	6, 96
BfoI	RGCGCY	1 cut(s)	114
BisI	GCNGC	4 cut(s)	29, 59, 165, 528
BlsI	GCNGC	4 cut(s)	30, 60, 166, 529
Bme18I	GGWCC	1 cut(s)	187
BmgT120I	GGNCC	2 cut(s)	39, 187
BmiI	GGNNCC	2 cut(s)	93, 189
BmsI	GCATC	3 cut(s)	139, 160, 544
BpiI	GAAGAC	1 cut(s)	460
Bpu10I	CCTNAGC	1 cut(s)	183
BpuEI	CTTGAG	1 cut(s)	412
Bsa29I	ATCGAT	1 cut(s)	147
BsaBI	GATNNNNATC	1 cut(s)	234
BsaJI	CCNNGG	2 cut(s)	76, 254
Bsc4I	CCNNNNNNNGG	3 cut(s)	88, 128, 310
Bse118I	RCCGGY	1 cut(s)	107
Bse1I	ACTGG	1 cut(s)	686
Bse8I	GATNNNNATC	1 cut(s)	234
BseCI	ATCGAT	1 cut(s)	147
BseDI	CCNNGG	2 cut(s)	76, 254
BseJI	GATNNNNATC	1 cut(s)	234
BseLI	CCNNNNNNNGG	3 cut(s)	88, 128, 310
BseMII	CTCAG	4 cut(s)	76, 174, 495, 671
BseNI	ACTGG	1 cut(s)	686
BseRI	GAGGAG	1 cut(s)	482
BseXI	GCAGC	3 cut(s)	70, 151, 514
BseYI	CCCAGC	1 cut(s)	127
BshFI	GGCC	3 cut(s)	41, 75, 81
BshVI	ATCGAT	1 cut(s)	147
BsiHKAI	GWGCWC	1 cut(s)	252
BsiSI	CCGG	2 cut(s)	72, 108
BslFI	GGGAC	2 cut(s)	101, 272
BslI	CCNNNNNNNGG	3 cut(s)	88, 128, 310
BsmAI	GTCTC	1 cut(s)	301
BsmFI	GGGAC	2 cut(s)	101, 272
BsnI	GGCC	3 cut(s)	41, 75, 81
Bsp1286I	GDGCHC	1 cut(s)	252
Bsp143I	GATC	5 cut(s)	153, 229, 436, 568, 682
BspACI	CCGC	3 cut(s)	28, 37, 271
BspANI	GGCC	3 cut(s)	41, 75, 81
BspCNI	CTCAG	4 cut(s)	75, 175, 496, 670
BspDI	ATCGAT	1 cut(s)	147
BspLI	GGNNCC	2 cut(s)	93, 189
BspPI	GGATC	2 cut(s)	431, 677
BsrBI	CCGCTC	1 cut(s)	28
BsrFI	RCCGGY	1 cut(s)	107
BsrI	ACTGG	1 cut(s)	686
BssAI	RCCGGY	1 cut(s)	107
BssECI	CCNNGG	2 cut(s)	76, 254
BssMI	GATC	5 cut(s)	153, 229, 436, 568, 682
BssNAI	GTATAC	1 cut(s)	501
BssSI	CACGAG	1 cut(s)	83
BssT1I	CCWWGG	2 cut(s)	76, 254
Bst1107I	GTATAC	1 cut(s)	501
Bst2BI	CACGAG	1 cut(s)	83
Bst4CI	ACNGT	1 cut(s)	640
BstAPI	GCANNNNNTGC	1 cut(s)	488
BstC8I	GCNNGC	2 cut(s)	39, 109
BstDEI	CTNAG	5 cut(s)	62, 183, 422, 504, 657
BstH2I	RGCGCY	1 cut(s)	114
BstHHI	GCGC	1 cut(s)	113
BstKTI	GATC	5 cut(s)	156, 232, 439, 571, 685
BstMAI	GTCTC	1 cut(s)	301
BstMBI	GATC	5 cut(s)	153, 229, 436, 568, 682
BstMWI	GCNNNNNNNGC	4 cut(s)	34, 170, 179, 488
BstNSI	RCATGY	3 cut(s)	565, 701, 758
BstV1I	GCAGC	3 cut(s)	70, 151, 514
BstV2I	GAAGAC	1 cut(s)	460
BstX2I	RGATCY	1 cut(s)	436
BstYI	RGATCY	1 cut(s)	436
BstZ17I	GTATAC	1 cut(s)	501
Bsu15I	ATCGAT	1 cut(s)	147
BsuRI	GGCC	3 cut(s)	41, 75, 81
BsuTUI	ATCGAT	1 cut(s)	147
BtgZI	GCGATG	1 cut(s)	108
BtsIMutI	CAGTG	1 cut(s)	693
Cac8I	GCNNGC	2 cut(s)	39, 109
CfoI	GCGC	1 cut(s)	113
Cfr10I	RCCGGY	1 cut(s)	107
Cfr13I	GGNCC	2 cut(s)	39, 187
ClaI	ATCGAT	1 cut(s)	147
Csp6I	GTAC	2 cut(s)	274, 668
CviAII	CATG	5 cut(s)	562, 698, 714, 743, 755
CviQI	GTAC	2 cut(s)	274, 668
DdeI	CTNAG	5 cut(s)	62, 183, 422, 504, 657
DpnI	GATC	5 cut(s)	155, 231, 438, 570, 684
DpnII	GATC	5 cut(s)	153, 229, 436, 568, 682
EaeI	YGGCCR	1 cut(s)	73
Eco130I	CCWWGG	2 cut(s)	76, 254
Eco32I	GATATC	2 cut(s)	301, 540
Eco47I	GGWCC	1 cut(s)	187
EcoO109I	RGGNCCY	1 cut(s)	187
EcoRV	GATATC	2 cut(s)	301, 540
EcoT14I	CCWWGG	2 cut(s)	76, 254
ErhI	CCWWGG	2 cut(s)	76, 254
FaeI	CATG	5 cut(s)	565, 701, 717, 746, 758
FaqI	GGGAC	2 cut(s)	101, 272
FatI	CATG	5 cut(s)	561, 697, 713, 742, 754
FauI	CCCGC	1 cut(s)	30
FblI	GTMKAC	1 cut(s)	500
Fnu4HI	GCNGC	4 cut(s)	29, 59, 165, 528
Fsp4HI	GCNGC	4 cut(s)	29, 59, 165, 528
FspBI	CTAG	2 cut(s)	6, 96
GlaI	GCGC	1 cut(s)	112
GluI	GCNGC	4 cut(s)	29, 59, 165, 528
GsaI	CCCAGC	1 cut(s)	131
HaeII	RGCGCY	1 cut(s)	114
HaeIII	GGCC	3 cut(s)	41, 75, 81
HapII	CCGG	2 cut(s)	72, 108
HhaI	GCGC	1 cut(s)	113
Hin1II	CATG	5 cut(s)	565, 701, 717, 746, 758
Hin6I	GCGC	1 cut(s)	111
HinP1I	GCGC	1 cut(s)	111
HinfI	GANTC	3 cut(s)	102, 329, 613
HpaII	CCGG	2 cut(s)	72, 108
HphI	GGTGA	2 cut(s)	421, 484
Hpy166II	GTNNAC	4 cut(s)	13, 501, 668, 695
Hpy188I	TCNGA	3 cut(s)	65, 597, 618
Hpy188III	TCNNGA	4 cut(s)	239, 304, 333, 543
Hpy8I	GTNNAC	4 cut(s)	13, 501, 668, 695
Hpy99I	CGWCG	1 cut(s)	285
HpyAV	CCTTC	1 cut(s)	741
HpyCH4III	ACNGT	1 cut(s)	640
HpyCH4IV	ACGT	1 cut(s)	780
HpyCH4V	TGCA	6 cut(s)	206, 434, 482, 491, 644, 650
HpyF10VI	GCNNNNNNNGC	4 cut(s)	34, 170, 179, 488
HpyF3I	CTNAG	5 cut(s)	62, 183, 422, 504, 657
HpySE526I	ACGT	1 cut(s)	780
Hsp92II	CATG	5 cut(s)	565, 701, 717, 746, 758
HspAI	GCGC	1 cut(s)	111
KroI	GCCGGC	1 cut(s)	107
KroNI	GCCGGC	1 cut(s)	109
Kzo9I	GATC	5 cut(s)	153, 229, 436, 568, 682
LmnI	GCTCC	1 cut(s)	25
Lsp1109I	GCAGC	3 cut(s)	70, 151, 514
LweI	GCATC	3 cut(s)	139, 160, 544
MaeI	CTAG	2 cut(s)	6, 96
MaeII	ACGT	1 cut(s)	780
MaeIII	GTNAC	4 cut(s)	607, 709, 767, 776
MalI	GATC	5 cut(s)	155, 231, 438, 570, 684
MbiI	CCGCTC	1 cut(s)	28
MboI	GATC	5 cut(s)	153, 229, 436, 568, 682
MboII	GAAGA	2 cut(s)	465, 623
MfeI	CAATTG	1 cut(s)	19
MflI	RGATCY	1 cut(s)	436
MhlI	GDGCHC	1 cut(s)	252
MluCI	AATT	5 cut(s)	19, 200, 492, 509, 802
MmeI	TCCRAC	2 cut(s)	430, 555
MnlI	CCTC	9 cut(s)	81, 178, 387, 400, 409, 460, 463, 470, 670
MreI	CGCCGGCG	1 cut(s)	107
MroNI	GCCGGC	1 cut(s)	107
MroXI	GAANNNNTTC	1 cut(s)	627
MseI	TTAA	1 cut(s)	794
MslI	CAYNNNNRTG	2 cut(s)	47, 747
MspA1I	CMGCKG	1 cut(s)	271
MspI	CCGG	2 cut(s)	72, 108
MunI	CAATTG	1 cut(s)	19
MwoI	GCNNNNNNNGC	4 cut(s)	34, 170, 179, 488
NaeI	GCCGGC	1 cut(s)	109
NdeII	GATC	5 cut(s)	153, 229, 436, 568, 682
NgoMIV	GCCGGC	1 cut(s)	107
NlaIII	CATG	5 cut(s)	565, 701, 717, 746, 758
NlaIV	GGNNCC	2 cut(s)	93, 189
NspI	RCATGY	3 cut(s)	565, 701, 758
PciI	ACATGT	3 cut(s)	561, 697, 754
PdiI	GCCGGC	1 cut(s)	109
PdmI	GAANNNNTTC	1 cut(s)	627
PfeI	GAWTC	3 cut(s)	102, 329, 613
PkrI	GCNGC	4 cut(s)	30, 60, 166, 529
PpuMI	RGGWCCY	1 cut(s)	187
PscI	ACATGT	3 cut(s)	561, 697, 754
Psp5II	RGGWCCY	1 cut(s)	187
PspFI	CCCAGC	1 cut(s)	127
PspN4I	GGNNCC	2 cut(s)	93, 189
PspPI	GGNCC	2 cut(s)	39, 187
PspPPI	RGGWCCY	1 cut(s)	187
PsuI	RGATCY	1 cut(s)	436
RsaI	GTAC	2 cut(s)	275, 669
RsaNI	GTAC	2 cut(s)	274, 668
RseI	CAYNNNNRTG	2 cut(s)	47, 747
SaqAI	TTAA	1 cut(s)	794
SatI	GCNGC	4 cut(s)	29, 59, 165, 528
Sau3AI	GATC	5 cut(s)	153, 229, 436, 568, 682
Sau96I	GGNCC	2 cut(s)	39, 187
SduI	GDGCHC	1 cut(s)	252
SfaNI	GCATC	3 cut(s)	139, 160, 544
SgrAI	CRCCGGYG	1 cut(s)	107
SinI	GGWCC	1 cut(s)	187
SmiMI	CAYNNNNRTG	2 cut(s)	47, 747
SmlI	CTYRAG	1 cut(s)	391
SmoI	CTYRAG	1 cut(s)	391
Sse9I	AATT	5 cut(s)	19, 200, 492, 509, 802
SsiI	CCGC	3 cut(s)	28, 37, 271
SspMI	CTAG	2 cut(s)	6, 96
StyI	CCWWGG	2 cut(s)	76, 254
TaaI	ACNGT	1 cut(s)	640
TaiI	ACGT	1 cut(s)	783
TaqI	TCGA	1 cut(s)	147
TasI	AATT	5 cut(s)	19, 200, 492, 509, 802
TauI	GCSGC	1 cut(s)	31
TfiI	GAWTC	3 cut(s)	102, 329, 613
Tru1I	TTAA	1 cut(s)	794
Tru9I	TTAA	1 cut(s)	794
TscAI	CASTG	1 cut(s)	693
TseI	GCWGC	3 cut(s)	58, 164, 527
TspDTI	ATGAA	3 cut(s)	386, 731, 765
TspRI	CASTG	1 cut(s)	693
VpaK11BI	GGWCC	1 cut(s)	187
XapI	RAATTY	2 cut(s)	200, 802
XceI	RCATGY	3 cut(s)	565, 701, 758
XmiI	GTMKAC	1 cut(s)	500
XmnI	GAANNNNTTC	1 cut(s)	627
XspI	CTAG	2 cut(s)	6, 96

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.