Rh7AG118000

callose synthase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Forward (+)
9225504 .. 9248757
23254 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG118000.1

Sequence Viewer

Length: 4935 bp
ATGGCTAGGGTTTACGACAATTGGGAGCGGCTGCAAAAACTTGCGAGAAGGGATGGGGGTCAAATAGATCGCAATCGTGATATTGAGTACCTCTGGGAATTTTACCAGCGCTACAAGCGACGACATCACCTGGAGGATATTCAGAGGGAGGAGGAGAGAATGCGTGAATCTGGCACTTTTACCGCTAACTTTGGAGACTATAACGAGATGAAAAAGACAATTGCTATCCTGAGGGCATTGATTGAGGTGATGGAGTTGCTCAGCAAAGATGCAGATCCTCATGGAGTTGGAAGGCAAATTACAGAGGAGTTGCGCAGAATTAAAAGCACTGATACCGCATTATCTAGGGAGCTCACAGCCTACAATATTGTCCCACTGGGAGCACCATCAATAACCAATGCAATTGGAGTATTTCCAGAGATTAGAGGTGCAATGTCGGCAATTAGATATACTGAACAATTCCCTAGGCTGCCAGCTAAAGTTGAGATATCTGGACAACGGGATGCGGACATGTTTGATCTTCTGGAATTTGTGTTCGGTTTTCAGAAAGACAATGTAAGGAACCAGAGAGAGAATGTTGTCCTTACAATTGCAAATGCACAATCTCGCCTTGGTATACCTGCTCAGGCTGATCCAACAGGAAAGAGCACTTTCGTCGAGCATCGAACGTTTCTTCACTTGTATCGAAGTTTTCATCGTCTCTGGATCTTTCTAGCTTTGATGTTCCAGGGTTTGGCAATTATAGCCTTTAATGATGGGAAGATCAATTCGGATACAGTGAAGAGTGTACTCAGCATTGGGCCGGCATTTGCTATCATGAACTTCGTAGAAAGTAGTTTGGATGTGTTGCTCATGTTTGGGGCTTATACCACAGCCAGAGGCATGGCTATCTCAAGACTTGTAATTAGATTTTTCTGGTTTGGCTTGAGTTCTGTCGCTGTGACATATATTTATGTGAAGGTTCTGCAGGAAAGAAATGATAAATCAAATGATTCATTCTACTTTCGGATATACATTCTTGTACTGGGTGTTTATGCAGCTTTACGCCTAGTCCTTGCGCTATTACTCAAATTTCCGGCATGTCATAAGCTTTCTGAAATGTCAGATCAATCATTTTTTCAATTTTTCAAGTGGATATATGAGGAGCGTTATTTTGTTGGACGTGGTCTTTATGAGAGGATGAGCGATTATCTCAGGTCTGTGCTCTTTTGGGTGGTAATCTTCACATGCAAGTTCCTTTTCACGTACTTTCTCCAGATTAAGCCTCTTGTTGAACCAACGAGAATTATTGTGGACCTTCCAGCTGTGCAATATGCATGGCATGATTTGGTCTCAAAGAACAACAAAAATGTGTTAACTATAGCTAGCCTATGGGCTCCTGTTGTGGCTATCTATCTCATGGACATTCACATATGGTACACTCTTTTGTCGGCCATAATTGGCGGTGTAATGGGTGCAAGGTCTCGGTTAGGCGAGATACGCTCAATTGAAATGGTGCATAAACGTTTTGAGAGTTTTCCGGAAGCTTTTGTGAAGAATCTAGTTTCACAATCACAGAAACGAAGGTTTCCGTCTAACAGTGAACCATCTCAGGATTCTCAAGTCTTAAACAAGACAAATGCAACAATTTTTTCTCCATTTTGGAATGAGATAATAAAAAGCTTACGAGAGGAGGATTTTATCAGTAATAGGGAGAAGGATTTGCTTTCTATTCCTAGCAACACTGGAAGTCTAAGATTAGTGCAGTGGCCTCTGTTTCTTCTAAGTAGTAAGATCTTGCTTGCAATTGATTTGGCCTTGGACTGCAAAGATACGCAGGCAGATCTTTGGAGCAGAGTATGCAGGGATGAGTACATGGCATATGCTGTTCAGGAATGCTACTACAGTATTGAAAAAATATTGTATTCTCTGGTTGAGGGTGAAGGGAGACTTTGGGTGGAGAGGATCTATCGAGAGATCAACAACAGTATTATGGAGGGTTCGCTTGTTGTAACTTTAAATCTTGCAAAGCTTCCAGCAGTGCTACGAAAATTTACGGCTTTAACTGGGCTGCTGATACGTCCAGAAACCGATGTGCTTGCAAAAGGTGCCGCTAAAGCTGTATTTGATGTATATGAGGCCGTTACACATGACCTTCTGTCACCTGATTTGAGGGAGCAGCTCGACACATGGAGCCTTTTAGCAAAAGCAAGAAATGAAGGGCGCTTGTTTTCTAGGATAAAGTGGCCCAGTGACCCAGAAACTAAAGACCTGGTGAAGCGACTATACCTTCTTCTTACTGTAAAGGATTCTGCAGCAAATATTCCGAAGAATCTTGAAGCAAGAAGGAGATTAGAATTTTTCACAAATTCGTTATTTATGGACATCCCTTCAGCAAAGCCAGTTAGTGAAATGGTACCTTTCAGTGTATTCACCCCATACTACAGTGAGACTGTACTTTATAGTTCCTCCGAATTGCGGGTTGAAAATGAGGATGGAATTTCTGTTCTTTTTTATCTTCAGAAAATTTTTCCAGATGAGTGGGACAATTTCTTGGAACGAATTGGTCGGGACCAGTCCACTGGGGATGCTGAGCTTCAGGAAAACTCAACTGATGCTTTGGAGCTTCGGTTTTGGGTATCTTATCGAGGACAGACTTTGGCCAGGACTGTGCGGGGTATGATGTATTATAGAAAGGCTTTAATGTTACAGAGTTATCTTGAAAGAAGGTCATTGGGAGTGGATGATTATTCTCAAGTTGATGCATTCTCAAGTCAAGGCTTTGAGTCATCACTTGAATCACGAGCCCAGGCAGATTTGAAGTTTACTTATGTTGTATCCTGCCAAATCTATGGGCAACAGAAGCAGAGAAGGGCACCAGAGGCTGCTGATATATCGCTCTTGTTGCAGAGGAATGAGGCACTGCGTGTTGCATATATACATGTGGAGGAAACTGCTACCGCTGAAGGACAGATCTTGAAAGAATTTTACTCAAAGCTTGTAAAAGCTGATATGCGTGGAACGGATCAGGAGATATATTCCATTAAACTTCCTGGTGATCCAAAGCTTGGTGAAGGGAAGCCTGAAAATCAAAACCATGCTATAGTCTTCACTCGTGGGGAAGCTGTTCAAACTATTGACATGAACCAGGACAATTACCTTGAGGAGGCAATGAAAATGAGAAATCTTCTCGAGGAGTTTCACAAAAATCACGGTCTTCGCCCCCCATCTATTCTTGGTGTGAGAGAGCATGTATTTACTGGAAGTGTCTCATCTTTAGCATGGTTCATGTCCAATCAAGAGACTAGCTTTGTAACTTTAGCTCAACGTGTTTTAGCATTCCCTCTCAAAGTTCGTATGCATTATGGGCATCCTGATGTGTTTGACCGCATCTTTCACATTACTCGAGGTGGAATTAGTAAAGCTTCACGTGTTATTAACATCAGTGAAGATATTTTTGCAGGGTTCAACTCCACATTAAGGCAGGGTAACATTACCCACCACGAATACATTCAGGTTGGGAAAGGAAGGGATGTTGGCCTGAACCAGATTGCATTGTTTGAAGGGAAAGTTGCAGGTGGAAATGGGGAGCAAGTCCTTAGTAGGGATGTCTACAGGCTTGGGCAACTTCTTGATTTTTTCAGAATGTTCTCTTTCTTCTACACAACAGTTGGTTACTATGTGTGTACAATGATGACCGTCCTCATTGTATACATCTTCCTGTATGGAAGGGCGTACCTGGCTTTCTCTGGACTTGATCGTGCAATTGCGAAGGAAGCAAAAATATCGGGTAACACAGCATTAGATGCTGTTCTTAATGCACAGTTTTTGGTGCAGATTGGAATTTTCACAGCAGTCCCAATGATAATGGGTTTTATACTTGAATTGGGATTACTAAAGGCGGTTTTCAGTTTTATCACTATGCAGCTGCAGTTGTGTTCTGTGTTCTTCACGTTCTCTTTGGGAACTAGAACTCATTATTTTGGACGTACCATCCTCCATGGAGGTGCAAAATACCGAGCAACTGGTAGGGGGTTTGTTGTCCGACACATAAAGTTTGCTGATAATTATAGGCTCTACTCTAGAAGCCATTTCGTCAAAGCGCTTGAAGTGGCTCTTCTCCTCATAGTTTACATTGCATATGGGTACGCGGATGGTGGTGCTGTTTCTTACATTCTGCTAACTCTTAGCAGTTGGTTCCTCGTCATCTCCTGGCTGTTTGCTCCCTACATCTTTAATCCTTCCGGTTTTGAGTGGCAAAAGACAGTGGAAGATTTTGATGATTGGACAAGTTGGCTTCTTTACAAAGGTGGAGTAGGAGTTAAGGGAGAAAATAGCTGGGAATCTTGGTGGGATGAGGAGCAGATGCATATTCAAACATTGAGAGGTCGTATCTTGGAAACAATTTTGAGCTTGAGATTCTTCTTATTTCAATATGGGATTGTTTACAAACTCCATCTCACTGGGAAGGACACATCACTCGCGATATACGGCTTCTCTTGGGTTGTGTTGATAACTGTTGTCATGATATTCAAGGTGTTCACCTTGAGTCAGAAAAAGTCGGCCAAATTCCAGCTGTTCATGAGATTTACACAGGGTGTCACGTCCATGGGACTGGTTGCAGCTATTGTTCTACTTGTTATATTCACGAGGCTTTCAATAGCAGACCTGTTTGCAAGCATACTTGCAATCATTCCGACCGGATGGGCCATAATATGTCTAGCTATCACGTGGAAGAGCATTGTCAGGAGTCTTGGTTTATGGGACTCGGTGAGGGAGTTTGCCAGAATGTACGATGCTGGTATGGGTATGCTCATTTTTGCTCCTATAGCATTCTTGTCATGGTTCCCGTTCATCTCCACCTTCCAGTCTCGGCTTCTGTTTAACCAAGCATTTAGTCGTGGGTTGGAGATCTCTCTCATCCTTGCTGGAAACAAAGCTAACGTGGATGTCTGA

Protein Analysis

1644

Amino Acids

188.48

Weight (kDa)

8.76

Isoelectric Point (pI)

40.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CALS1 PF25968 584 - 761 7.6e-47 Callose synthase 1 domain
Glucan_synthase PF02364 768 - 1546 2.6e-230 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3545
Acc16I TGCGCA 1 cut(s) 314
Acc36I ACCTGC 2 cut(s) 628, 3545
Acc65I GGTACC 1 cut(s) 2395
AccB1I GGYRCC 3 cut(s) 2087, 2395, 2854
AccB7I CCANNNNNTGG 2 cut(s) 733, 3047
AccBSI CCGCTC 1 cut(s) 28
AccI GTMKAC 3 cut(s) 616, 3591, 3690
AccII CGCG 2 cut(s) 4130, 4463
AccIII TCCGGA 1 cut(s) 1519
AclI AACGTT 2 cut(s) 668, 1504
AclWI GGATC 6 cut(s) 269, 626, 713, 1952, 3012, 3032
AcoI YGGCCR 3 cut(s) 1431, 2640, 4542
AcuI CTGAAG 4 cut(s) 2355, 2483, 2561, 2964
AcvI CACGTG 2 cut(s) 3410, 4710
AdeI CACNNNGTG 2 cut(s) 2906, 4577
AfeI AGCGCT 2 cut(s) 110, 4083
AfiI CCNNNNNNNGG 6 cut(s) 733, 2457, 3047, 3145, 3459, 3583
AflIII ACRYGT 4 cut(s) 510, 2920, 3307, 3409
AhdI GACNNNNNGTC 1 cut(s) 2137
AjiI CACGTC 2 cut(s) 1163, 4584
AjnI CCWGG 9 cut(s) 129, 726, 2250, 2642, 2787, 3031, 3126, 3717, 4190
AloI GAACNNNNNNTCC 4 cut(s) 518, 550, 2469, 2501
Alw21I GWGCWC 4 cut(s) 354, 385, 650, 1206
Alw26I GTCTC 9 cut(s) 189, 704, 1336, 1467, 1921, 2423, 3253, 3275, 4854
AlwI GGATC 6 cut(s) 269, 626, 713, 1952, 3012, 3032
AlwNI CAGNNNCTG 1 cut(s) 2864
Ama87I CYCGRG 2 cut(s) 3170, 3384
Aor13HI TCCGGA 1 cut(s) 1519
Aor51HI AGCGCT 2 cut(s) 110, 4083
Asp700I GAANNNNTTC 2 cut(s) 3105, 3489
Asp718I GGTACC 1 cut(s) 2395
AspA2I CCTAGG 1 cut(s) 464
AspLEI GCGC 5 cut(s) 111, 315, 1060, 2205, 4084
AspS9I GGNCC 5 cut(s) 800, 1294, 2226, 2551, 4686
AsuNHI GCTAGC 1 cut(s) 1364
AvaI CYCGRG 2 cut(s) 3170, 3384
AvaII GGWCC 2 cut(s) 1294, 2551
AvrII CCTAGG 1 cut(s) 464
AxyI CCTNAGG 1 cut(s) 230
BaeGI GKGCMC 1 cut(s) 2857
BalI TGGCCA 1 cut(s) 2642
BanI GGYRCC 3 cut(s) 2087, 2395, 2854
BanII GRGCYC 3 cut(s) 354, 1378, 2788
BarI GAAGNNNNNNTAC 4 cut(s) 283, 315, 2249, 2281
BauI CACGAG 3 cut(s) 2781, 3093, 4627
BbrPI CACGTG 2 cut(s) 3410, 4710
BbsI GAAGAC 2 cut(s) 3079, 3188
Bbv12I GWGCWC 4 cut(s) 354, 385, 650, 1206
BceAI ACGGC 3 cut(s) 2052, 2105, 4486
BcgI CGANNNNNNTGC 6 cut(s) 637, 671, 2060, 2094, 3747, 3781
BciT130I CCWGG 9 cut(s) 131, 728, 2252, 2644, 2789, 3033, 3128, 3719, 4192
BciVI GTATCC 2 cut(s) 766, 2827
BcoDI GTCTC 9 cut(s) 189, 704, 1336, 1467, 1921, 2423, 3253, 3275, 4854
BfmI CTRYAG 9 cut(s) 965, 1359, 1882, 2292, 2422, 3081, 3592, 3908, 4806
BfoI RGCGCY 3 cut(s) 112, 2206, 4085
BfuAI ACCTGC 2 cut(s) 628, 3545
BfuI GTATCC 2 cut(s) 766, 2827
BglII AGATCT 4 cut(s) 1773, 1822, 2952, 4890
BlnI CCTAGG 1 cut(s) 464
BlpI GCTNAGC 2 cut(s) 260, 2571
Bme1390I CCNGG 9 cut(s) 131, 728, 2252, 2644, 2789, 3033, 3128, 3719, 4192
Bme18I GGWCC 2 cut(s) 1294, 2551
BmeRI GACNNNNNGTC 1 cut(s) 2137
BmeT110I CYCGRG 2 cut(s) 3170, 3384
BmgBI CACGTC 2 cut(s) 1163, 4584
BmgT120I GGNCC 5 cut(s) 800, 1294, 2226, 2551, 4686
BmiI GGNNCC 9 cut(s) 563, 1377, 2089, 2174, 2397, 2552, 2856, 4178, 4826
BmrFI CCNGG 9 cut(s) 131, 728, 2252, 2644, 2789, 3033, 3128, 3719, 4192
BmrI ACTGGG 6 cut(s) 386, 1034, 2055, 2223, 2571, 4452
BmtI GCTAGC 1 cut(s) 1368
BmuI ACTGGG 6 cut(s) 386, 1034, 2055, 2223, 2571, 4452
BpiI GAAGAC 2 cut(s) 3079, 3188
BplI GAGNNNNNCTC 2 cut(s) 1466, 1498
BpmI CTGGAG 2 cut(s) 152, 1238
Bpu10I CCTNAGC 1 cut(s) 624
Bpu1102I GCTNAGC 2 cut(s) 260, 2571
BpuEI CTTGAG 8 cut(s) 877, 946, 1584, 2718, 2734, 3161, 4414, 4546
BsaAI YACGTR 3 cut(s) 1245, 3410, 4710
BsaBI GATNNNNATC 2 cut(s) 72, 273
BsaI GGTCTC 2 cut(s) 1336, 1467
BsaJI CCNNGG 7 cut(s) 464, 610, 727, 1797, 2787, 3979, 4587
BsaWI WCCGGW 3 cut(s) 1519, 4223, 4679
BsaXI ACNNNNNCTCC 6 cut(s) 2594, 2624, 4284, 4314, 4720, 4750
Bsc4I CCNNNNNNNGG 6 cut(s) 733, 2457, 3047, 3145, 3459, 3583
Bse118I RCCGGY 1 cut(s) 802
Bse21I CCTNAGG 1 cut(s) 230
Bse3DI GCAATG 3 cut(s) 438, 3156, 4113
Bse8I GATNNNNATC 2 cut(s) 72, 273
BseAI TCCGGA 1 cut(s) 1519
BseBI CCWGG 9 cut(s) 131, 728, 2252, 2644, 2789, 3033, 3128, 3719, 4192
BseDI CCNNGG 7 cut(s) 464, 610, 727, 1797, 2787, 3979, 4587
BseJI GATNNNNATC 2 cut(s) 72, 273
BseLI CCNNNNNNNGG 6 cut(s) 733, 2457, 3047, 3145, 3459, 3583
BseMI GCAATG 3 cut(s) 438, 3156, 4113
BseMII CTCAG 7 cut(s) 221, 274, 638, 805, 1207, 1604, 2562
BseRI GAGGAG 9 cut(s) 164, 167, 320, 1157, 1685, 3158, 3188, 4091, 4352
BseSI GKGCMC 1 cut(s) 2857
BseYI CCCAGC 1 cut(s) 4317
BsgI GTGCAG 2 cut(s) 1763, 3833
Bsh1236I CGCG 2 cut(s) 4130, 4463
Bsh1285I CGRYCG 1 cut(s) 4680
BshNI GGYRCC 3 cut(s) 2087, 2395, 2854
BsiEI CGRYCG 1 cut(s) 4680
BsiHKAI GWGCWC 4 cut(s) 354, 385, 650, 1206
BsiHKCI CYCGRG 2 cut(s) 3170, 3384
BsiSI CCGG 5 cut(s) 803, 1076, 1520, 4224, 4680
BslFI GGGAC 6 cut(s) 356, 2537, 2564, 3821, 4605, 4757
BslI CCNNNNNNNGG 6 cut(s) 733, 2457, 3047, 3145, 3459, 3583
BsmAI GTCTC 9 cut(s) 189, 704, 1336, 1467, 1921, 2423, 3253, 3275, 4854
BsmBI CGTCTC 1 cut(s) 704
BsmFI GGGAC 6 cut(s) 356, 2537, 2564, 3821, 4605, 4757
BsmI GAATGC 5 cut(s) 165, 1880, 2744, 3317, 4811
Bso31I GGTCTC 2 cut(s) 1336, 1467
BsoBI CYCGRG 2 cut(s) 3170, 3384
Bsp1286I GDGCHC 7 cut(s) 354, 385, 650, 1206, 1378, 2788, 2857
Bsp13I TCCGGA 1 cut(s) 1519
Bsp1407I TGTACA 1 cut(s) 3665
Bsp1720I GCTNAGC 2 cut(s) 260, 2571
Bsp19I CCATGG 2 cut(s) 3979, 4587
Bsp68I TCGCGA 1 cut(s) 4463
BspCNI CTCAG 7 cut(s) 222, 273, 637, 804, 1206, 1603, 2563
BspEI TCCGGA 1 cut(s) 1519
BspFNI CGCG 2 cut(s) 4130, 4463
BspHI TCATGA 3 cut(s) 816, 4503, 4560
BspLI GGNNCC 9 cut(s) 563, 1377, 2089, 2174, 2397, 2552, 2856, 4178, 4826
BspMAI CTGCAG 3 cut(s) 969, 2296, 3912
BspMI ACCTGC 2 cut(s) 628, 3545
BspOI GCTAGC 1 cut(s) 1368
BspPI GGATC 6 cut(s) 269, 626, 713, 1952, 3012, 3032
BspQI GCTCTTC 2 cut(s) 4101, 4709
BspT107I GGYRCC 3 cut(s) 2087, 2395, 2854
BspTNI GGTCTC 2 cut(s) 1336, 1467
BsrBI CCGCTC 1 cut(s) 28
BsrDI GCAATG 3 cut(s) 438, 3156, 4113
BsrFI RCCGGY 1 cut(s) 802
BsrGI TGTACA 1 cut(s) 3665
BssAI RCCGGY 1 cut(s) 802
BssECI CCNNGG 7 cut(s) 464, 610, 727, 1797, 2787, 3979, 4587
BssNAI GTATAC 2 cut(s) 617, 3691
BssSI CACGAG 3 cut(s) 2781, 3093, 4627
BssT1I CCWWGG 5 cut(s) 464, 610, 1797, 3979, 4587
Bst1107I GTATAC 2 cut(s) 617, 3691
Bst2BI CACGAG 3 cut(s) 2781, 3093, 4627
Bst2UI CCWGG 9 cut(s) 131, 728, 2252, 2644, 2789, 3033, 3128, 3719, 4192
Bst6I CTCTTC 3 cut(s) 776, 4101, 4709
BstAPI GCANNNNNTGC 3 cut(s) 1839, 2087, 3785
BstAUI TGTACA 1 cut(s) 3665
BstBAI YACGTR 3 cut(s) 1245, 3410, 4710
BstC8I GCNNGC 7 cut(s) 474, 804, 1366, 1782, 1818, 2079, 4657
BstDSI CCRYGG 2 cut(s) 3979, 4587
BstENI CCTNNNNNAGG 1 cut(s) 3143
BstFNI CGCG 2 cut(s) 4130, 4463
BstH2I RGCGCY 3 cut(s) 112, 2206, 4085
BstHHI GCGC 5 cut(s) 111, 315, 1060, 2205, 4084
BstMAI GTCTC 9 cut(s) 189, 704, 1336, 1467, 1921, 2423, 3253, 3275, 4854
BstMCI CGRYCG 1 cut(s) 4680
BstNI CCWGG 9 cut(s) 131, 728, 2252, 2644, 2789, 3033, 3128, 3719, 4192
BstNSI RCATGY 5 cut(s) 514, 1083, 1230, 2924, 3233
BstSCI CCNGG 9 cut(s) 129, 726, 2250, 2642, 2787, 3031, 3126, 3717, 4190
BstSFI CTRYAG 9 cut(s) 965, 1359, 1882, 2292, 2422, 3081, 3592, 3908, 4806
BstSLI GKGCMC 1 cut(s) 2857
BstUI CGCG 2 cut(s) 4130, 4463
BstV2I GAAGAC 2 cut(s) 3079, 3188
BstX2I RGATCY 7 cut(s) 274, 705, 1773, 1822, 1944, 2952, 4890
BstXI CCANNNNNNTGG 6 cut(s) 883, 2520, 2561, 2831, 4442, 4594
BstYI RGATCY 7 cut(s) 274, 705, 1773, 1822, 1944, 2952, 4890
BstZ17I GTATAC 2 cut(s) 617, 3691
Bsu36I CCTNAGG 1 cut(s) 230
BsuI GTATCC 2 cut(s) 766, 2827
BtgI CCRYGG 2 cut(s) 3979, 4587
BtrI CACGTC 2 cut(s) 1163, 4584
BtsI GCAGTG 3 cut(s) 1751, 2025, 2900
BtuMI TCGCGA 1 cut(s) 4463
BveI ACCTGC 2 cut(s) 628, 3545
Cac8I GCNNGC 7 cut(s) 474, 804, 1366, 1782, 1818, 2079, 4657
CaiI CAGNNNCTG 1 cut(s) 2864
CciI TCATGA 3 cut(s) 816, 4503, 4560
CfoI GCGC 5 cut(s) 111, 315, 1060, 2205, 4084
Cfr10I RCCGGY 1 cut(s) 802
Cfr13I GGNCC 5 cut(s) 800, 1294, 2226, 2551, 4686
CsiI ACCWGGT 1 cut(s) 2250
DraI TTTAAA 1 cut(s) 1998
DraIII CACNNNGTG 2 cut(s) 2906, 4577
DriI GACNNNNNGTC 1 cut(s) 2137
EaeI YGGCCR 3 cut(s) 1431, 2640, 4542
Eam1104I CTCTTC 3 cut(s) 776, 4101, 4709
Eam1105I GACNNNNNGTC 1 cut(s) 2137
EarI CTCTTC 3 cut(s) 776, 4101, 4709
Ecl136II GAGCTC 1 cut(s) 352
Eco130I CCWWGG 5 cut(s) 464, 610, 1797, 3979, 4587
Eco24I GRGCYC 3 cut(s) 354, 1378, 2788
Eco31I GGTCTC 2 cut(s) 1336, 1467
Eco32I GATATC 1 cut(s) 489
Eco47I GGWCC 2 cut(s) 1294, 2551
Eco47III AGCGCT 2 cut(s) 110, 4083
Eco53kI GAGCTC 1 cut(s) 352
Eco57I CTGAAG 4 cut(s) 2355, 2483, 2561, 2964
Eco72I CACGTG 2 cut(s) 3410, 4710
Eco81I CCTNAGG 1 cut(s) 230
Eco88I CYCGRG 2 cut(s) 3170, 3384
EcoICRI GAGCTC 1 cut(s) 352
EcoNI CCTNNNNNAGG 1 cut(s) 3143
EcoRII CCWGG 9 cut(s) 129, 726, 2250, 2642, 2787, 3031, 3126, 3717, 4190
EcoRV GATATC 1 cut(s) 489
EcoT14I CCWWGG 5 cut(s) 464, 610, 1797, 3979, 4587
EcoT22I ATGCAT 4 cut(s) 1318, 2746, 3342, 4350
EcoT38I GRGCYC 3 cut(s) 354, 1378, 2788
ErhI CCWWGG 5 cut(s) 464, 610, 1797, 3979, 4587
Esp3I CGTCTC 1 cut(s) 704
FalI AAGNNNNNCTT 4 cut(s) 1914, 1946, 4080, 4112
FaqI GGGAC 6 cut(s) 356, 2537, 2564, 3821, 4605, 4757
FauI CCCGC 2 cut(s) 2451, 2646
FauNDI CATATG 3 cut(s) 1412, 1861, 4120
FblI GTMKAC 3 cut(s) 616, 3591, 3690
FriOI GRGCYC 3 cut(s) 354, 1378, 2788
FspI TGCGCA 1 cut(s) 314
GlaI GCGC 5 cut(s) 110, 314, 1059, 2204, 4083
GsaI CCCAGC 1 cut(s) 4321
GsuI CTGGAG 2 cut(s) 152, 1238
HaeII RGCGCY 3 cut(s) 112, 2206, 4085
HapII CCGG 5 cut(s) 803, 1076, 1520, 4224, 4680
HhaI GCGC 5 cut(s) 111, 315, 1060, 2205, 4084
Hin6I GCGC 5 cut(s) 109, 313, 1058, 2203, 4082
HinP1I GCGC 5 cut(s) 109, 313, 1058, 2203, 4082
HincII GTYRAC 1 cut(s) 1356
HindII GTYRAC 1 cut(s) 1356
HindIII AAGCTT 7 cut(s) 1088, 1524, 1660, 2009, 2975, 3044, 3402
HpaI GTTAAC 1 cut(s) 1356
HpaII CCGG 5 cut(s) 803, 1076, 1520, 4224, 4680
Hpy99I CGWCG 2 cut(s) 123, 659
HspAI GCGC 5 cut(s) 109, 313, 1058, 2203, 4082
Kpn2I TCCGGA 1 cut(s) 1519
KpnI GGTACC 1 cut(s) 2399
KroI GCCGGC 1 cut(s) 802
KroNI GCCGGC 1 cut(s) 804
KspAI GTTAAC 1 cut(s) 1356
LguI GCTCTTC 2 cut(s) 4101, 4709
MabI ACCWGGT 1 cut(s) 2250
MbiI CCGCTC 1 cut(s) 28
MfeI CAATTG 7 cut(s) 19, 219, 402, 588, 1485, 1785, 3744
MflI RGATCY 7 cut(s) 274, 705, 1773, 1822, 1944, 2952, 4890
MhlI GDGCHC 7 cut(s) 354, 385, 650, 1206, 1378, 2788, 2857
MlsI TGGCCA 1 cut(s) 2642
MluNI TGGCCA 1 cut(s) 2642
MlyI GAGTC 4 cut(s) 2774, 4537, 4738, 4739
MmeI TCCRAC 6 cut(s) 268, 659, 1138, 4048, 4700, 4866
Mox20I TGGCCA 1 cut(s) 2642
Mph1103I ATGCAT 4 cut(s) 1318, 2746, 3342, 4350
MroI TCCGGA 1 cut(s) 1519
MroNI GCCGGC 1 cut(s) 802
MroXI GAANNNNTTC 2 cut(s) 3105, 3489
MscI TGGCCA 1 cut(s) 2642
MslI CAYNNNNRTG 3 cut(s) 3354, 3984, 4586
Msp20I TGGCCA 1 cut(s) 2642
MspA1I CMGCKG 4 cut(s) 1304, 2942, 3907, 4555
MspI CCGG 5 cut(s) 803, 1076, 1520, 4224, 4680
MspR9I CCNGG 9 cut(s) 131, 728, 2252, 2644, 2789, 3033, 3128, 3719, 4192
MunI CAATTG 7 cut(s) 19, 219, 402, 588, 1485, 1785, 3744
Mva1269I GAATGC 5 cut(s) 165, 1880, 2744, 3317, 4811
MvaI CCWGG 9 cut(s) 131, 728, 2252, 2644, 2789, 3033, 3128, 3719, 4192
MvnI CGCG 2 cut(s) 4130, 4463
NaeI GCCGGC 1 cut(s) 804
NcoI CCATGG 2 cut(s) 3979, 4587
NdeI CATATG 3 cut(s) 1412, 1861, 4120
NgoMIV GCCGGC 1 cut(s) 802
NheI GCTAGC 1 cut(s) 1364
NlaIV GGNNCC 9 cut(s) 563, 1377, 2089, 2174, 2397, 2552, 2856, 4178, 4826
NmeAIII GCCGAG 1 cut(s) 4831
NmuCI GTSAC 4 cut(s) 940, 2139, 2231, 4579
NruI TCGCGA 1 cut(s) 4463
NsbI TGCGCA 1 cut(s) 314
NsiI ATGCAT 4 cut(s) 1318, 2746, 3342, 4350
NspI RCATGY 5 cut(s) 514, 1083, 1230, 2924, 3233
PaeR7I CTCGAG 2 cut(s) 3170, 3384
PagI TCATGA 3 cut(s) 816, 4503, 4560
PaqCI CACCTGC 1 cut(s) 3545
PciI ACATGT 2 cut(s) 510, 2920
PciSI GCTCTTC 2 cut(s) 4101, 4709
PctI GAATGC 5 cut(s) 165, 1880, 2744, 3317, 4811
PdiI GCCGGC 1 cut(s) 804
PdmI GAANNNNTTC 2 cut(s) 3105, 3489
PfeI GAWTC 9 cut(s) 167, 992, 1537, 1595, 2288, 2311, 2777, 4322, 4398
PflFI GACNNNGTC 1 cut(s) 1164
PflMI CCANNNNNTGG 2 cut(s) 733, 3047
PleI GAGTC 4 cut(s) 2773, 4536, 4737, 4739
PmaCI CACGTG 2 cut(s) 3410, 4710
PmlI CACGTG 2 cut(s) 3410, 4710
PpsI GAGTC 4 cut(s) 2773, 4536, 4737, 4739
Ppu21I YACGTR 3 cut(s) 1245, 3410, 4710
PscI ACATGT 2 cut(s) 510, 2920
Psp124BI GAGCTC 1 cut(s) 354
Psp1406I AACGTT 2 cut(s) 668, 1504
Psp6I CCWGG 9 cut(s) 129, 726, 2250, 2642, 2787, 3031, 3126, 3717, 4190
PspCI CACGTG 2 cut(s) 3410, 4710
PspFI CCCAGC 1 cut(s) 4317
PspGI CCWGG 9 cut(s) 129, 726, 2250, 2642, 2787, 3031, 3126, 3717, 4190
PspN4I GGNNCC 9 cut(s) 563, 1377, 2089, 2174, 2397, 2552, 2856, 4178, 4826
PspPI GGNCC 5 cut(s) 800, 1294, 2226, 2551, 4686
PspXI VCTCGAGB 1 cut(s) 3384
PstI CTGCAG 3 cut(s) 969, 2296, 3912
PstNI CAGNNNCTG 1 cut(s) 2864
PsuI RGATCY 7 cut(s) 274, 705, 1773, 1822, 1944, 2952, 4890
PsyI GACNNNGTC 1 cut(s) 1164
PvuII CAGCTG 3 cut(s) 1304, 3907, 4555
RruI TCGCGA 1 cut(s) 4463
RseI CAYNNNNRTG 3 cut(s) 3354, 3984, 4586
SacI GAGCTC 1 cut(s) 354
SapI GCTCTTC 2 cut(s) 4101, 4709
Sau96I GGNCC 5 cut(s) 800, 1294, 2226, 2551, 4686
SchI GAGTC 4 cut(s) 2774, 4537, 4738, 4739
ScrFI CCNGG 9 cut(s) 131, 728, 2252, 2644, 2789, 3033, 3128, 3719, 4192
SduI GDGCHC 7 cut(s) 354, 385, 650, 1206, 1378, 2788, 2857
SexAI ACCWGGT 1 cut(s) 2250
SfcI CTRYAG 9 cut(s) 965, 1359, 1882, 2292, 2422, 3081, 3592, 3908, 4806
Sfr274I CTCGAG 2 cut(s) 3170, 3384
SinI GGWCC 2 cut(s) 1294, 2551
SlaI CTCGAG 2 cut(s) 3170, 3384
SmiMI CAYNNNNRTG 3 cut(s) 3354, 3984, 4586
SspI AATATT 3 cut(s) 367, 1899, 2302
SstI GAGCTC 1 cut(s) 354
StyD4I CCNGG 9 cut(s) 129, 726, 2250, 2642, 2787, 3031, 3126, 3717, 4190
StyI CCWWGG 5 cut(s) 464, 610, 1797, 3979, 4587
TaqI TCGA 8 cut(s) 657, 664, 685, 1951, 2163, 2626, 3171, 3385
TatI WGTACW 5 cut(s) 787, 1021, 1851, 2434, 3665
TauI GCSGC 2 cut(s) 31, 2093
TfiI GAWTC 9 cut(s) 167, 992, 1537, 1595, 2288, 2311, 2777, 4322, 4398
TseFI GTSAC 4 cut(s) 940, 2139, 2231, 4579
Tsp45I GTSAC 4 cut(s) 940, 2139, 2231, 4579
TspGWI ACGGA 2 cut(s) 1560, 3017
Tth111I GACNNNGTC 1 cut(s) 1164
Van91I CCANNNNNTGG 2 cut(s) 733, 3047
VpaK11BI GGWCC 2 cut(s) 1294, 2551
XagI CCTNNNNNAGG 1 cut(s) 3143
XbaI TCTAGA 1 cut(s) 4061
XceI RCATGY 5 cut(s) 514, 1083, 1230, 2924, 3233
XhoI CTCGAG 2 cut(s) 3170, 3384
XmaJI CCTAGG 1 cut(s) 464
XmiI GTMKAC 3 cut(s) 616, 3591, 3690
XmnI GAANNNNTTC 2 cut(s) 3105, 3489
Zsp2I ATGCAT 4 cut(s) 1318, 2746, 3342, 4350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.