Rh7CG122900

callose synthase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
9521703 .. 9545580
23878 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG122900.1

Sequence Viewer

Length: 5709 bp
ATGGCTAGGGTTTACGACAATTGGGAGCGGCTGGTGCGAGCCACGCTCAAGAGAGAGCAGCTCAGAACTTCCGGCCAAGGCCATGAGAGGGCTCCGAGTGGAATCGCCGGCGCGGTTCCGTCGTCGCTGGGCAAGGTCTCGAATATCGATTTGATCTTGCAGGCTGCGGATGAAATTCAAGCCGAGGATGCAAACGTCTCCAGAATTCTGTGTGAGCAGGCGTATAGTATGGCGCAAAATCTTGACCCTACTAGTGATGGAAGAGGAGTTCTTCAGTTTAAGACTGGTTTGATGTCTGTAATTAAGCAAAAACTTGCGAGAAGGGATGGGGGTCAAATAGATCGCAATCGTGATATTGAGTACCTCTGGGAATTTTACCAGCGCTACAAGCGACGACATCACCTGGAGGATATCCAGAGGGAGGAGGAGAGAATGCGTGAATCTGGCACTTTTAGTGCTAACTTTGGAGACTATAACGAGATGAAAAAGACAATTGCTATCCTGAGGGCATTGATTGAGGTGATGGAGTTGCTCAGCAAAGATGCAGATCCTCATGGAGTTGGAAGGCAAATTACAGAGGAGTTGCGCAGAATTAAAAGCACCGATACCGCATTATCTAGGGAGCTCACAGCCTACAATATTGTCCCACTGGGAGCACCATCAATAACCAATGCAATTGGAGTATTTCCAGAAATTAGAGGTGCAATGTCGGCAATTAGATATACTGAACAATTCCCTAGGCTGCCAGCTAAAGTTGAGATATCTGGACAACGGGATGCGGACATGTTTGATCTTCTGGAATTTGTGTTCGGTTTTCAGAAAGACAATGTAAGGAACCAGAGAGAGAATGTTGTCCTTACAATTGCAAATGCACAATCTCGCCTTGGTATACCTGCTCAGGCTGATCCAAAGATAGACGAGAAAGCAATCAATGAGGTATTTCTGAAAGTCCTGGATAATTATATCAAATGGTGCAAATACCTGCGGATCCGGCTTGTATGGAATAGTTTACAAGCAATTAATCGGGACAGAAAGCTTTTTCTGGTGTCATTGTACTTTCTGATATGGGGTGAGGCTGCAAATGTCCGCTTTCTTCCTGAATGCATTTGCTACATATTTCACAATATGGCGAAAGAGTTGGATGCAATTTTAGATCATGGAGAAGCTATTCCTGCTGCTAGCTGCACAATAGGAAATGATTCTGTGTCTTTCCTTGATCAGATTGTTTATCCTATATATGAAACATTGGCAGCGGAAGCTGCTAGAAACAATAATGGGAAAGCTGCACATTCAGCATGGCGGAATTATGACGACTTCAATGAATACTTTTGGTCACCTGCTTGTTTTGACTTGAACTGGCCTATGAGGAGGGATTCCACATTTTTGTTGAAGCCTAAAAAGTGGAAAAGGACAGGAAAGAGCACTTTCGTCGAGCATCGAACGTTTCTTCACTTGTATCGAAGTTTTCATCGTCTCTGGATCTTTCTAGCTTTGATGTTCCAGGGTTTGGCAATTATAGCCTTTAATGATGGGAAGATCAATTCGGATACAGTGAAGAGTGTACTCAGCATTGGGCCGGCATTTGCTATCATGAACTTCGTAGAAAGTAGTTTGGATGTGTTGCTCATGTTTGGGGCTTATACCACAGCCAGAGGCATGGCTATCTCAAGACTTGTAATTAGATTTTTCTGGTTTGGCTTGAGTTCTGTCGCTGTGACATATATTTATGTGAAGGTTCTGCAGGAAAGAAATGATAAATCAAATGATTCATTCTACTTTCGGATATACATTCTTGTACTGGGTGTTTATGCAGCTTTACGCCTAGTCCTTGCGCTATTACTCAAATTTCCGGCATGTCATAAGCTTTCTGAAATGTCAGATCAATCATTTTTCCAATTTTTCAAGTGGATATATGAGGAGCGTTATTTTGTTGGACGTGGTCTTTATGAGAGGATGAGCGATTATCTCAGGTCTGTGCTCTTTTGGGTGGTAATCTTCACATGCAAGTTCCTTTTCACGTACTTTCTCCAGATTAAGCCTCTTGTTGAACCAACGAGAATTATTGTGGACCTTCCAGCTGTGCAATATGCATGGCATGATTTGGTCTCAAAGAACAACAAAAATGTGTTAACTATAGCTAGCCTATGGGCTCCTGTTGTGGCTATCTATCTCATGGACATTCACATATGGTACACTCTTTTGTCGGCCATAATTGGCGGTGTAATGGGTGCAAGGTCTCGGTTAGGCGAGATACGCTCAATTGAAATGGTGCATAAACGTTTTGAGAGTTTTCCGGAAGCTTTTGTGAAGAATCTAGTTTCACAATCACAGAAACGAAGGTTTCCGTCTAACAGTGAACCATCTCAGGATTCTCAAGTCTTAAACAAGACAAATGCAACAATTTTTTCTCCATTTTGGAATGAGATAATAAAAAGCTTACGAGAGGAGGATTTTATCAGTAATAGGGAGAAGGATTTGCTTTCTATTCCTAGCAACACTGGAAGTCTAAGATTAGTGCAGTGGCCTCTGTTTCTTCTAAGTAGTAAGATCTTGCTTGCAATTGATTTGGCCTTGGACTGCAAAGATACGCAGGCAGATCTTTGGAGCAGAGTATGCAGGGATGAGTACATGGCATATGCTGTTCAGGAATGCTACTACAGTATTGAAAAAATATTGTATTCTCTGGTTGAGGGTGAAGGGAGACTTTGGGTGGAGAGGATCTATCGAGAGATCAACAACAGTATTATGGAGGGTTCGCTTGTTGTAACTTTAAATCTTGCAAAGCTTCCAGCAGTGCTACGAAAATTTACAGCTTTAACTGGGCTGCTGATACGTCCAGAAACCGATGTGCTTGCAAAAGGTGCCGCTAAAGCTGTATTTGATGTATATGAGGCCGTTACACATGACCTTCTGTCACCTGATTTGAGGGAGCAGCTCGACACATGGAGCCTTTTAGCAAAAGCAAGAAATGAAGGGCGCTTGTTTTCTAGGATAAAGTGGCCCAGTGACCCAGAAACTAAAGACCTGGTGAAGCGACTATACCTTCTTCTTACTGTAAAGGATTCTGCAGCAAATATTCCGAAGAATCTTGAAGCAAGAAGGAGATTAGAATTTTTCACAAATTCGTTATTTATGGACATCCCTTCAGCAAAGCCAGTTAGTGAAATGGTACCTTTCAGTGTATTCACCCCATACTACAGTGAAACTGTACTTTATAGTTCCTCCGAATTGCGGGTTGAAAATGAGGATGGAATTTCTGTTCTTTTTTATCTTCAGAAAATTTTTCCAGATGAGTGGGACAATTTCTTGGAACGAATTGGTCGGGACCAGTCCACTGGGGATGCTGAGCTTCAGGAAAACTCAAGTGATGCTTTGGAGCTTCGGTTTTGGGTATCTTATCGAGGACAGACTTTGGCCAGGACTGTGCGGGGTATGATGTATTATAGAAAGGCTTTAATGTTACAGAGTTATCTTGAAAGAAGGTCATTGGGAGTGGATGATTATTCTCAAGTTGATGCATTCTCAAGTCAAGGCTTTGAGTCATCACTTGAATCACGAGCCCAGGCAGATTTGAAGTTTACTTATGTTGTATCCTGCCAAATCTATGGGCAACAGAAGCAGAGAAGGGCACCAGAGGCTGCTGATATATCGCTCTTGTTGCAGAGGAATGAGGCACTGCGTGTTGCATATATACATGTGGAGGAAACTGCTACCGCTGAAGGACAGATCTTGAAAGAATTTTACTCAAAGCTTGTAAAAGCTGATATGCGTGGAACGGATCAGGAGATATATTCCATTAAACTTCCTGGTGATCCAAAGCTTGGTGAAGGGAAGCCTGAAAATCAAAACCATGCTATAGTCTTCACTCGCGGGGAAGCTGTTCAAACTATTGACATGAACCAGGACAATTACCTTGAGGAGGCAATGAAAATGAGAAATCTTCTCGAGGAGTTTCACAAAAATCACGGTCTTCGCCCCCCATCTATTCTTGGTGTGAGAGAGCATGTATTTACTGGAAGTGTCTCATCTTTAGCATGGTTCATGTCCAATCAAGAGACTAGCTTTGTAACTTTAGCTCAACGTGTTTTAGCATTCCCTCTCAAAGTTCGTATGCATTATGGGCATCCTGATGTGTTTGACCGCATCTTTCACATTACTCGAGGTGGAATTAGTAAAGCTTCACGTGTTATTAACATCAGTGAAGATATTTTTGCAGGGTTCAACTCCACATTAAGGCAGGGTAACATTACCCACCACGAATACATTCAGGTTGGGAAAGGAAGGGATGTTGGCCTGAACCAGATTGCATTGTTTGAAGGGAAAGTTGCAGGTGGAAATGGGGAGCAAGTCCTTAGTAGGGATGTCTACAGGCTTGGGCAACTTCTTGATTTTTTCAGAATGTTCTCTTTCTTCTACACAACAGTTGGTTACTATGTGTGTACAATGATGACCGTCCTCATTGTATACATCTTCCTGTATGGAAGGGCGTACCTGGCTTTCTCTGGACTTGATCGTGCAATTGCGAAGGAAGCAAAAATATCGGGTAACACAGCATTAGATGCTGTTCTTAATGCACAGTTTTTGGTGCAGATTGGAATTTTCACAGCAGTCCCAATGATAATGGGTTTTATACTTGAATTGGGATTACTAAAGGCGGTTTTCAGTTTTATCACTATGCAGCTGCAGTTGTGTTCTGTGTTCTTCACATTCTCTTTGGGAACTAGAACTCATTATTTTGGACGTACCATCCTCCATGGAGGTGCAAAATACCGAGCAACTGGTAGGGGGTTTGTTGTCCGACACATAAAGTTTGCTGATAATTATAGGCTCTACTCTAGAAGCCATTTCGTCAAAGCGCTTGAAGTGGCTCTTCTCCTCATAGTTTACATTGCATATGGGTACGCGGATGGTGGTGCTGTTTCTTACATTCTGCTAACTCTTAGCAGTTGGTTCCTCGTCATCTCCTGGCTGTTTGCTCCCTACATCTTTAATCCTTCTGGTTTTGAGTGGCAAAAGACAGTGGAAGATTTTGATGATTGGACAAGTTGGCTTCTGTACAAAGGTGGAGTAGGAGTTAAGGGAGAAAATAGCTGGGAATCTTGGTGGGATGAGGAGCAGATGCATATTCAAACATTGAGAGGTCGTATCTTGGAAACAATTTTGAGCTTGAGATTCTTCTTATTTCAATATGGCATTGTTTACAAGCTCCATCTCACTGGGAAGGACACATCACTCGCGATATACGGCTTCTCTTGGGTTGTGTTGATAACTGTTGTCATGATATTCAAGGTGTTCACCTTGAGTCAGAAAAAGTCGGCCAAATTCCAGCTGTTCATGAGATTTACACAGGGTGTCACGTCCATGGGACTGGTTGCAGCTATTGTTCTACTTGTTATATTCACGAGGCTTTCAATAGCAGACCTGTTTGCAAGCATACTTGCAATCATTCCGACCGGATGGGCCATAATATGTCTAGCCATCACGTGGAAGAGCATTGTCAGGAGTCTTGGTTTATGGGACTCGGTGAGGGAGTTTGCCAGAATGTACGATGCTGGTATGGGTATGCTCATTTTTGCTCCTATAGCATTCTTGTCATGGTTCCCGTTCATCTCCACCTTCCAGTCTCGGCTTCTGTTTAACCAAGCATTTAGTCGTGGGTTGGAGATCTCTCTCATCCTTGCTGGAAACAAAGCTAACGTGGATGTCTGA

Protein Analysis

1902

Amino Acids

217.76

Weight (kDa)

8.7

Isoelectric Point (pI)

39.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
FKS1_dom1 PF14288 345 - 453 3.6e-40 1,3-beta-glucan synthase subunit FKS1, domain-1
CALS1 PF25968 842 - 1019 9.2e-47 Callose synthase 1 domain
Glucan_synthase PF02364 1026 - 1804 3.4e-230 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1345, 4319
Acc16I TGCGCA 1 cut(s) 587
Acc36I ACCTGC 4 cut(s) 901, 990, 1345, 4319
Acc65I GGTACC 1 cut(s) 3169
AccB1I GGYRCC 3 cut(s) 2861, 3169, 3628
AccB7I CCANNNNNTGG 3 cut(s) 1507, 3821, 5484
AccBSI CCGCTC 1 cut(s) 28
AccI GTMKAC 3 cut(s) 889, 4365, 4464
AccII CGCG 4 cut(s) 113, 3870, 4904, 5237
AccIII TCCGGA 1 cut(s) 2293
AclI AACGTT 2 cut(s) 1442, 2278
AclWI GGATC 8 cut(s) 542, 899, 982, 995, 1487, 2726, 3786, 3806
AcoI YGGCCR 4 cut(s) 73, 2205, 3414, 5316
AcuI CTGAAG 5 cut(s) 257, 3129, 3257, 3335, 3738
AcvI CACGTG 2 cut(s) 4184, 5484
AdeI CACNNNGTG 2 cut(s) 3680, 5351
AfeI AGCGCT 2 cut(s) 383, 4857
AfiI CCNNNNNNNGG 9 cut(s) 88, 421, 1507, 3231, 3821, 3919, 4233, 4357, 5484
AflIII ACRYGT 4 cut(s) 783, 3694, 4081, 4183
AhdI GACNNNNNGTC 1 cut(s) 2911
AhlI ACTAGT 1 cut(s) 251
AjiI CACGTC 2 cut(s) 1937, 5358
AloI GAACNNNNNNTCC 6 cut(s) 252, 284, 791, 823, 3243, 3275
Alw21I GWGCWC 4 cut(s) 627, 658, 1424, 1980
AlwI GGATC 8 cut(s) 542, 899, 982, 995, 1487, 2726, 3786, 3806
AlwNI CAGNNNCTG 1 cut(s) 3638
Ama87I CYCGRG 2 cut(s) 3944, 4158
Aor13HI TCCGGA 1 cut(s) 2293
Aor51HI AGCGCT 2 cut(s) 383, 4857
AseI ATTAAT 1 cut(s) 1020
Asp700I GAANNNNTTC 4 cut(s) 1167, 1198, 3879, 4263
Asp718I GGTACC 1 cut(s) 3169
AspA2I CCTAGG 1 cut(s) 737
AspLEI GCGC 7 cut(s) 113, 235, 384, 588, 1834, 2979, 4858
AspS9I GGNCC 5 cut(s) 1574, 2068, 3000, 3325, 5460
AsuNHI GCTAGC 2 cut(s) 1178, 2138
AvaI CYCGRG 2 cut(s) 3944, 4158
AvaII GGWCC 2 cut(s) 2068, 3325
AvrII CCTAGG 1 cut(s) 737
AxyI CCTNAGG 1 cut(s) 503
BaeGI GKGCMC 1 cut(s) 3631
BalI TGGCCA 1 cut(s) 3416
BamHI GGATCC 1 cut(s) 987
BanI GGYRCC 3 cut(s) 2861, 3169, 3628
BanII GRGCYC 4 cut(s) 94, 627, 2152, 3562
BarI GAAGNNNNNNTAC 4 cut(s) 556, 588, 3023, 3055
BauI CACGAG 2 cut(s) 3555, 5401
BbrPI CACGTG 2 cut(s) 4184, 5484
BbsI GAAGAC 2 cut(s) 3853, 3962
Bbv12I GWGCWC 4 cut(s) 627, 658, 1424, 1980
BceAI ACGGC 2 cut(s) 2879, 5260
BcgI CGANNNNNNTGC 6 cut(s) 1411, 1445, 2834, 2868, 4521, 4555
BciVI GTATCC 2 cut(s) 1540, 3601
BclI TGATCA 1 cut(s) 1216
BcuI ACTAGT 1 cut(s) 251
BfmI CTRYAG 9 cut(s) 1739, 2133, 2656, 3066, 3196, 3855, 4366, 4682, 5580
BfoI RGCGCY 3 cut(s) 385, 2980, 4859
BfuAI ACCTGC 4 cut(s) 901, 990, 1345, 4319
BfuI GTATCC 2 cut(s) 1540, 3601
BglII AGATCT 4 cut(s) 2547, 2596, 3726, 5664
BlnI CCTAGG 1 cut(s) 737
BlpI GCTNAGC 2 cut(s) 533, 3345
Bme18I GGWCC 2 cut(s) 2068, 3325
BmeRI GACNNNNNGTC 1 cut(s) 2911
BmeT110I CYCGRG 2 cut(s) 3944, 4158
BmgBI CACGTC 2 cut(s) 1937, 5358
BmgT120I GGNCC 5 cut(s) 1574, 2068, 3000, 3325, 5460
BmrI ACTGGG 6 cut(s) 659, 1808, 2829, 2997, 3345, 5226
BmtI GCTAGC 2 cut(s) 1182, 2142
BmuI ACTGGG 6 cut(s) 659, 1808, 2829, 2997, 3345, 5226
BpiI GAAGAC 2 cut(s) 3853, 3962
BplI GAGNNNNNCTC 6 cut(s) 30, 62, 45, 77, 2240, 2272
BpmI CTGGAG 3 cut(s) 184, 425, 2012
Bpu10I CCTNAGC 1 cut(s) 897
Bpu1102I GCTNAGC 2 cut(s) 533, 3345
Bsa29I ATCGAT 1 cut(s) 147
BsaAI YACGTR 3 cut(s) 2019, 4184, 5484
BsaBI GATNNNNATC 2 cut(s) 345, 546
BsaI GGTCTC 3 cut(s) 142, 2110, 2241
BsaJI CCNNGG 9 cut(s) 76, 183, 737, 883, 1501, 2571, 3561, 4753, 5361
BsaWI WCCGGW 2 cut(s) 2293, 5453
BsaXI ACNNNNNCTCC 6 cut(s) 3368, 3398, 5058, 5088, 5494, 5524
Bsc4I CCNNNNNNNGG 9 cut(s) 88, 421, 1507, 3231, 3821, 3919, 4233, 4357, 5484
Bse118I RCCGGY 2 cut(s) 107, 1576
Bse21I CCTNAGG 1 cut(s) 503
Bse3DI GCAATG 3 cut(s) 711, 3930, 4887
Bse8I GATNNNNATC 2 cut(s) 345, 546
BseAI TCCGGA 1 cut(s) 2293
BseCI ATCGAT 1 cut(s) 147
BseDI CCNNGG 9 cut(s) 76, 183, 737, 883, 1501, 2571, 3561, 4753, 5361
BseJI GATNNNNATC 2 cut(s) 345, 546
BseLI CCNNNNNNNGG 9 cut(s) 88, 421, 1507, 3231, 3821, 3919, 4233, 4357, 5484
BseMI GCAATG 3 cut(s) 711, 3930, 4887
BseMII CTCAG 8 cut(s) 76, 494, 547, 911, 1579, 1981, 2378, 3336
BseSI GKGCMC 1 cut(s) 3631
BseYI CCCAGC 2 cut(s) 127, 5091
BsgI GTGCAG 4 cut(s) 1168, 1269, 2537, 4607
Bsh1236I CGCG 4 cut(s) 113, 3870, 4904, 5237
Bsh1285I CGRYCG 1 cut(s) 5454
BshNI GGYRCC 3 cut(s) 2861, 3169, 3628
BshVI ATCGAT 1 cut(s) 147
BsiEI CGRYCG 1 cut(s) 5454
BsiHKAI GWGCWC 4 cut(s) 627, 658, 1424, 1980
BsiHKCI CYCGRG 2 cut(s) 3944, 4158
BsiSI CCGG 7 cut(s) 72, 108, 991, 1577, 1850, 2294, 5454
BslFI GGGAC 7 cut(s) 629, 1040, 3311, 3338, 4595, 5379, 5531
BslI CCNNNNNNNGG 9 cut(s) 88, 421, 1507, 3231, 3821, 3919, 4233, 4357, 5484
BsmBI CGTCTC 2 cut(s) 202, 1478
BsmFI GGGAC 7 cut(s) 629, 1040, 3311, 3338, 4595, 5379, 5531
BsmI GAATGC 6 cut(s) 438, 1106, 2654, 3518, 4091, 5585
Bso31I GGTCTC 3 cut(s) 142, 2110, 2241
BsoBI CYCGRG 2 cut(s) 3944, 4158
Bsp1286I GDGCHC 8 cut(s) 94, 627, 658, 1424, 1980, 2152, 3562, 3631
Bsp13I TCCGGA 1 cut(s) 2293
Bsp1407I TGTACA 2 cut(s) 4439, 5055
Bsp1720I GCTNAGC 2 cut(s) 533, 3345
Bsp19I CCATGG 2 cut(s) 4753, 5361
Bsp68I TCGCGA 1 cut(s) 5237
BspCNI CTCAG 8 cut(s) 75, 495, 546, 910, 1578, 1980, 2377, 3337
BspDI ATCGAT 1 cut(s) 147
BspEI TCCGGA 1 cut(s) 2293
BspFNI CGCG 4 cut(s) 113, 3870, 4904, 5237
BspHI TCATGA 3 cut(s) 1590, 5277, 5334
BspMAI CTGCAG 3 cut(s) 1743, 3070, 4686
BspMI ACCTGC 4 cut(s) 901, 990, 1345, 4319
BspOI GCTAGC 2 cut(s) 1182, 2142
BspPI GGATC 8 cut(s) 542, 899, 982, 995, 1487, 2726, 3786, 3806
BspQI GCTCTTC 2 cut(s) 4875, 5483
BspT107I GGYRCC 3 cut(s) 2861, 3169, 3628
BspTNI GGTCTC 3 cut(s) 142, 2110, 2241
BsrBI CCGCTC 1 cut(s) 28
BsrDI GCAATG 3 cut(s) 711, 3930, 4887
BsrFI RCCGGY 2 cut(s) 107, 1576
BsrGI TGTACA 2 cut(s) 4439, 5055
BssAI RCCGGY 2 cut(s) 107, 1576
BssECI CCNNGG 9 cut(s) 76, 183, 737, 883, 1501, 2571, 3561, 4753, 5361
BssNAI GTATAC 2 cut(s) 890, 4465
BssSI CACGAG 2 cut(s) 3555, 5401
BssT1I CCWWGG 6 cut(s) 76, 737, 883, 2571, 4753, 5361
Bst1107I GTATAC 2 cut(s) 890, 4465
Bst2BI CACGAG 2 cut(s) 3555, 5401
Bst6I CTCTTC 4 cut(s) 256, 1550, 4875, 5483
BstAPI GCANNNNNTGC 3 cut(s) 2613, 2861, 4559
BstAUI TGTACA 2 cut(s) 4439, 5055
BstBAI YACGTR 3 cut(s) 2019, 4184, 5484
BstDSI CCRYGG 2 cut(s) 4753, 5361
BstEII GGTNACC 1 cut(s) 1332
BstENI CCTNNNNNAGG 1 cut(s) 3917
BstFNI CGCG 4 cut(s) 113, 3870, 4904, 5237
BstH2I RGCGCY 3 cut(s) 385, 2980, 4859
BstHHI GCGC 7 cut(s) 113, 235, 384, 588, 1834, 2979, 4858
BstMCI CGRYCG 1 cut(s) 5454
BstNSI RCATGY 5 cut(s) 787, 1857, 2004, 3698, 4007
BstPI GGTNACC 1 cut(s) 1332
BstSFI CTRYAG 9 cut(s) 1739, 2133, 2656, 3066, 3196, 3855, 4366, 4682, 5580
BstSLI GKGCMC 1 cut(s) 3631
BstUI CGCG 4 cut(s) 113, 3870, 4904, 5237
BstV2I GAAGAC 2 cut(s) 3853, 3962
BstX2I RGATCY 8 cut(s) 547, 987, 1479, 2547, 2596, 2718, 3726, 5664
BstXI CCANNNNNNTGG 6 cut(s) 1657, 3294, 3335, 3605, 5216, 5368
BstYI RGATCY 8 cut(s) 547, 987, 1479, 2547, 2596, 2718, 3726, 5664
BstZ17I GTATAC 2 cut(s) 890, 4465
Bsu15I ATCGAT 1 cut(s) 147
Bsu36I CCTNAGG 1 cut(s) 503
BsuI GTATCC 2 cut(s) 1540, 3601
BsuTUI ATCGAT 1 cut(s) 147
BtgI CCRYGG 2 cut(s) 4753, 5361
BtrI CACGTC 2 cut(s) 1937, 5358
BtsI GCAGTG 3 cut(s) 2525, 2799, 3674
BtuMI TCGCGA 1 cut(s) 5237
BveI ACCTGC 4 cut(s) 901, 990, 1345, 4319
CaiI CAGNNNCTG 1 cut(s) 3638
CciI TCATGA 3 cut(s) 1590, 5277, 5334
CfoI GCGC 7 cut(s) 113, 235, 384, 588, 1834, 2979, 4858
Cfr10I RCCGGY 2 cut(s) 107, 1576
Cfr13I GGNCC 5 cut(s) 1574, 2068, 3000, 3325, 5460
ClaI ATCGAT 1 cut(s) 147
CsiI ACCWGGT 1 cut(s) 3024
DraI TTTAAA 1 cut(s) 2772
DraIII CACNNNGTG 2 cut(s) 3680, 5351
DriI GACNNNNNGTC 1 cut(s) 2911
EaeI YGGCCR 4 cut(s) 73, 2205, 3414, 5316
Eam1104I CTCTTC 4 cut(s) 256, 1550, 4875, 5483
Eam1105I GACNNNNNGTC 1 cut(s) 2911
EarI CTCTTC 4 cut(s) 256, 1550, 4875, 5483
EciI GGCGGA 1 cut(s) 1315
Ecl136II GAGCTC 1 cut(s) 625
Eco130I CCWWGG 6 cut(s) 76, 737, 883, 2571, 4753, 5361
Eco24I GRGCYC 4 cut(s) 94, 627, 2152, 3562
Eco31I GGTCTC 3 cut(s) 142, 2110, 2241
Eco32I GATATC 2 cut(s) 412, 762
Eco47I GGWCC 2 cut(s) 2068, 3325
Eco47III AGCGCT 2 cut(s) 383, 4857
Eco53kI GAGCTC 1 cut(s) 625
Eco57I CTGAAG 5 cut(s) 257, 3129, 3257, 3335, 3738
Eco72I CACGTG 2 cut(s) 4184, 5484
Eco81I CCTNAGG 1 cut(s) 503
Eco88I CYCGRG 2 cut(s) 3944, 4158
Eco91I GGTNACC 1 cut(s) 1332
EcoICRI GAGCTC 1 cut(s) 625
EcoNI CCTNNNNNAGG 1 cut(s) 3917
EcoO65I GGTNACC 1 cut(s) 1332
EcoRI GAATTC 1 cut(s) 204
EcoRV GATATC 2 cut(s) 412, 762
EcoT14I CCWWGG 6 cut(s) 76, 737, 883, 2571, 4753, 5361
EcoT22I ATGCAT 5 cut(s) 1106, 2092, 3520, 4116, 5124
EcoT38I GRGCYC 4 cut(s) 94, 627, 2152, 3562
ErhI CCWWGG 6 cut(s) 76, 737, 883, 2571, 4753, 5361
Esp3I CGTCTC 2 cut(s) 202, 1478
FalI AAGNNNNNCTT 6 cut(s) 2688, 2720, 3355, 3387, 4854, 4886
FaqI GGGAC 7 cut(s) 629, 1040, 3311, 3338, 4595, 5379, 5531
FauI CCCGC 3 cut(s) 3225, 3420, 3863
FauNDI CATATG 3 cut(s) 2186, 2635, 4894
FbaI TGATCA 1 cut(s) 1216
FblI GTMKAC 3 cut(s) 889, 4365, 4464
FriOI GRGCYC 4 cut(s) 94, 627, 2152, 3562
FspI TGCGCA 1 cut(s) 587
GlaI GCGC 7 cut(s) 112, 234, 383, 587, 1833, 2978, 4857
GsaI CCCAGC 2 cut(s) 131, 5095
GsuI CTGGAG 3 cut(s) 184, 425, 2012
HaeII RGCGCY 3 cut(s) 385, 2980, 4859
HapII CCGG 7 cut(s) 72, 108, 991, 1577, 1850, 2294, 5454
HhaI GCGC 7 cut(s) 113, 235, 384, 588, 1834, 2979, 4858
Hin6I GCGC 7 cut(s) 111, 233, 382, 586, 1832, 2977, 4856
HinP1I GCGC 7 cut(s) 111, 233, 382, 586, 1832, 2977, 4856
HincII GTYRAC 1 cut(s) 2130
HindII GTYRAC 1 cut(s) 2130
HindIII AAGCTT 8 cut(s) 1034, 1862, 2298, 2434, 2783, 3749, 3818, 4176
HpaI GTTAAC 1 cut(s) 2130
HpaII CCGG 7 cut(s) 72, 108, 991, 1577, 1850, 2294, 5454
Hpy99I CGWCG 4 cut(s) 124, 127, 396, 1433
HspAI GCGC 7 cut(s) 111, 233, 382, 586, 1832, 2977, 4856
Kpn2I TCCGGA 1 cut(s) 2293
KpnI GGTACC 1 cut(s) 3173
KroI GCCGGC 2 cut(s) 107, 1576
KroNI GCCGGC 2 cut(s) 109, 1578
Ksp22I TGATCA 1 cut(s) 1216
KspAI GTTAAC 1 cut(s) 2130
LguI GCTCTTC 2 cut(s) 4875, 5483
MabI ACCWGGT 1 cut(s) 3024
MbiI CCGCTC 1 cut(s) 28
MfeI CAATTG 7 cut(s) 19, 492, 675, 861, 2259, 2559, 4518
MflI RGATCY 8 cut(s) 547, 987, 1479, 2547, 2596, 2718, 3726, 5664
MhlI GDGCHC 8 cut(s) 94, 627, 658, 1424, 1980, 2152, 3562, 3631
MlsI TGGCCA 1 cut(s) 3416
MluNI TGGCCA 1 cut(s) 3416
MlyI GAGTC 4 cut(s) 3548, 5311, 5512, 5513
MmeI TCCRAC 6 cut(s) 541, 1119, 1912, 4822, 5474, 5640
Mox20I TGGCCA 1 cut(s) 3416
Mph1103I ATGCAT 5 cut(s) 1106, 2092, 3520, 4116, 5124
MreI CGCCGGCG 1 cut(s) 107
MroI TCCGGA 1 cut(s) 2293
MroNI GCCGGC 2 cut(s) 107, 1576
MroXI GAANNNNTTC 4 cut(s) 1167, 1198, 3879, 4263
MscI TGGCCA 1 cut(s) 3416
MslI CAYNNNNRTG 3 cut(s) 4128, 4758, 5360
Msp20I TGGCCA 1 cut(s) 3416
MspA1I CMGCKG 5 cut(s) 1253, 2078, 3716, 4681, 5329
MspI CCGG 7 cut(s) 72, 108, 991, 1577, 1850, 2294, 5454
MunI CAATTG 7 cut(s) 19, 492, 675, 861, 2259, 2559, 4518
Mva1269I GAATGC 6 cut(s) 438, 1106, 2654, 3518, 4091, 5585
MvnI CGCG 4 cut(s) 113, 3870, 4904, 5237
NaeI GCCGGC 2 cut(s) 109, 1578
NcoI CCATGG 2 cut(s) 4753, 5361
NdeI CATATG 3 cut(s) 2186, 2635, 4894
NgoMIV GCCGGC 2 cut(s) 107, 1576
NheI GCTAGC 2 cut(s) 1178, 2138
NmeAIII GCCGAG 2 cut(s) 208, 5605
NmuCI GTSAC 5 cut(s) 1332, 1714, 2913, 3005, 5353
NruI TCGCGA 1 cut(s) 5237
NsbI TGCGCA 1 cut(s) 587
NsiI ATGCAT 5 cut(s) 1106, 2092, 3520, 4116, 5124
NspI RCATGY 5 cut(s) 787, 1857, 2004, 3698, 4007
PaeR7I CTCGAG 2 cut(s) 3944, 4158
PagI TCATGA 3 cut(s) 1590, 5277, 5334
PaqCI CACCTGC 2 cut(s) 1345, 4319
PciI ACATGT 2 cut(s) 783, 3694
PciSI GCTCTTC 2 cut(s) 4875, 5483
PctI GAATGC 6 cut(s) 438, 1106, 2654, 3518, 4091, 5585
PdiI GCCGGC 2 cut(s) 109, 1578
PdmI GAANNNNTTC 4 cut(s) 1167, 1198, 3879, 4263
PflFI GACNNNGTC 1 cut(s) 1938
PflMI CCANNNNNTGG 3 cut(s) 1507, 3821, 5484
PfoI TCCNGGA 1 cut(s) 951
PleI GAGTC 4 cut(s) 3547, 5310, 5511, 5513
PmaCI CACGTG 2 cut(s) 4184, 5484
PmlI CACGTG 2 cut(s) 4184, 5484
PpsI GAGTC 4 cut(s) 3547, 5310, 5511, 5513
Ppu21I YACGTR 3 cut(s) 2019, 4184, 5484
PscI ACATGT 2 cut(s) 783, 3694
PshBI ATTAAT 1 cut(s) 1020
Psp124BI GAGCTC 1 cut(s) 627
Psp1406I AACGTT 2 cut(s) 1442, 2278
PspCI CACGTG 2 cut(s) 4184, 5484
PspEI GGTNACC 1 cut(s) 1332
PspFI CCCAGC 2 cut(s) 127, 5091
PspPI GGNCC 5 cut(s) 1574, 2068, 3000, 3325, 5460
PspXI VCTCGAGB 1 cut(s) 4158
PstI CTGCAG 3 cut(s) 1743, 3070, 4686
PstNI CAGNNNCTG 1 cut(s) 3638
PsuI RGATCY 8 cut(s) 547, 987, 1479, 2547, 2596, 2718, 3726, 5664
PsyI GACNNNGTC 1 cut(s) 1938
PvuII CAGCTG 3 cut(s) 2078, 4681, 5329
RruI TCGCGA 1 cut(s) 5237
RseI CAYNNNNRTG 3 cut(s) 4128, 4758, 5360
SacI GAGCTC 1 cut(s) 627
SapI GCTCTTC 2 cut(s) 4875, 5483
Sau96I GGNCC 5 cut(s) 1574, 2068, 3000, 3325, 5460
SchI GAGTC 4 cut(s) 3548, 5311, 5512, 5513
SduI GDGCHC 8 cut(s) 94, 627, 658, 1424, 1980, 2152, 3562, 3631
SexAI ACCWGGT 1 cut(s) 3024
SfcI CTRYAG 9 cut(s) 1739, 2133, 2656, 3066, 3196, 3855, 4366, 4682, 5580
Sfr274I CTCGAG 2 cut(s) 3944, 4158
SgrAI CRCCGGYG 1 cut(s) 107
SinI GGWCC 2 cut(s) 2068, 3325
SlaI CTCGAG 2 cut(s) 3944, 4158
SmiMI CAYNNNNRTG 3 cut(s) 4128, 4758, 5360
SpeI ACTAGT 1 cut(s) 251
SspI AATATT 3 cut(s) 640, 2673, 3076
SstI GAGCTC 1 cut(s) 627
StyI CCWWGG 6 cut(s) 76, 737, 883, 2571, 4753, 5361
TatI WGTACW 7 cut(s) 1053, 1561, 1795, 2625, 3208, 4439, 5055
TauI GCSGC 2 cut(s) 31, 2867
TseFI GTSAC 5 cut(s) 1332, 1714, 2913, 3005, 5353
Tsp45I GTSAC 5 cut(s) 1332, 1714, 2913, 3005, 5353
TspGWI ACGGA 3 cut(s) 108, 2334, 3791
Tth111I GACNNNGTC 1 cut(s) 1938
Van91I CCANNNNNTGG 3 cut(s) 1507, 3821, 5484
VpaK11BI GGWCC 2 cut(s) 2068, 3325
VspI ATTAAT 1 cut(s) 1020
XagI CCTNNNNNAGG 1 cut(s) 3917
XbaI TCTAGA 1 cut(s) 4835
XceI RCATGY 5 cut(s) 787, 1857, 2004, 3698, 4007
XhoI CTCGAG 2 cut(s) 3944, 4158
XmaJI CCTAGG 1 cut(s) 737
XmiI GTMKAC 3 cut(s) 889, 4365, 4464
XmnI GAANNNNTTC 4 cut(s) 1167, 1198, 3879, 4263
Zsp2I ATGCAT 5 cut(s) 1106, 2092, 3520, 4116, 5124
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.