pycom06g14110

callose synthase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
18979390 .. 18983475
4086 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g14110.8

Sequence Viewer

Length: 1161 bp
ATGGCTAGGGTTTACGACAATTGGAAGCGGCTGGTGCGGGCCACGCTAAAGCGGGAGCAGCTCAGGAGCTCCGGCCAGGGCCATGAGAGGGTTCCTAGTGGAATCGCCGGCGCCGTCCCGCCGTCGCTCGGGAAGACCACCAATATCGATGCGATCTTACAAGCTGCCGACGCTATTCAAGCTGAGGACCCCAACGTCTCCAGAATTTTGTGTGAGCAGGCATATAGTATGGCGCAAAATCTGGATCCGAAAAGTGATGGCAGAGGCGTTCTTCAGTTTAAGACTGGATTGATGTCTGTAATCAAGCAAAAACTTGCAAAAAAAGATGGGGGTCAAATAGATCGGAATCGTGATATTGAGCACCTCTGGGATTTTTACCAGCGATACAAGCGACGACATAGAGTCGATGATATCCAGAAACAGGAACAAAGATGGCGTGAATCTGGAACTTTTAGTGCTGACTTTGGCGATTATTTAGAAATGAAAAAGACAATTGCTACCTTGAGAGCTTTAGTTGAGGTGATGGAGGCACTTAACAAAGATGCCGATCCTAATGGAGTTGGAAGACTTATTACAGAGGAGTTGCGAAAAGTTAAAAACACCGGTGCAACATTATCTGGGGAGCTTACAGCCTACAACATTGTCCCTCTAGAAGCACCATCATTGACCAATGCAATTGGAGTTTTCCCAGAAGTTAGAGGTGCAATATCTGCACTTAGGTATACCGAGGAATTCCCCAGACTTCCTGCTGATTTTGAGATATCTGGACAACGAGCTGCGGACATGTTTGATCTTCTGGAATGTGTGTTTGGTTTTCAGAAAGACAATGTAAGGAACCAGAGAGAGAATGTTGTTCTAACAATTGCAAATGCACAATCTCGGCTTGGTATACCCGGTTTGGCTGATCCAAAAATAGACGAGAAAGCAATAAATGAGGTATTTCTGAAAGTTCTGGATAATTATATAAAATGGTGCAGATACCTGCGGATACGCCTTGCATGGAATAGTTTACAAGCAATTGATCGGATCAGGAAACTTTTTCTGGTTTCCTTGTACTTTCTGATATGGGGTGAAGCTGCAAATGTCCGCTTTCTTCCTGAATGTATTTGCTACATATTTCACCATATGGCTAAAGAGTTAGATGCAATATTAGATCGATGA

Protein Analysis

387

Amino Acids

43.93

Weight (kDa)

8.81

Isoelectric Point (pI)

40.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 194
Acc36I ACCTGC 1 cut(s) 990
AccB1I GGYRCC 1 cut(s) 110
AccI GTMKAC 2 cut(s) 722, 889
AciI CCGC 7 cut(s) 28, 37, 52, 119, 779, 985, 1087
AclWI GGATC 5 cut(s) 239, 252, 542, 899, 1034
AcoI YGGCCR 1 cut(s) 73
AcsI RAATTY 2 cut(s) 204, 731
AcuI CTGAAG 1 cut(s) 257
AcyI GRCGYC 1 cut(s) 111
AfaI GTAC 1 cut(s) 1055
AfiI CCNNNNNNNGG 3 cut(s) 88, 128, 421
AflIII ACRYGT 1 cut(s) 783
AgeI ACCGGT 1 cut(s) 602
AgsI TTSAA 1 cut(s) 179
AhdI GACNNNNNGTC 1 cut(s) 401
AjnI CCWGG 1 cut(s) 75
AjuI GAANNNNNNNTTGG 2 cut(s) 792, 824
AluBI AGCT 8 cut(s) 61, 69, 164, 182, 509, 625, 776, 1076
AluI AGCT 8 cut(s) 61, 69, 164, 182, 509, 625, 776, 1076
Alw21I GWGCWC 2 cut(s) 71, 363
Alw26I GTCTC 1 cut(s) 202
AlwI GGATC 5 cut(s) 239, 252, 542, 899, 1034
Ama87I CYCGRG 1 cut(s) 128
AoxI GGCC 3 cut(s) 39, 73, 79
ApeKI GCWGC 4 cut(s) 58, 164, 776, 1076
ApoI RAATTY 2 cut(s) 204, 731
AsiGI ACCGGT 1 cut(s) 602
AspLEI GCGC 2 cut(s) 113, 235
AspS9I GGNCC 3 cut(s) 39, 79, 187
AsuC2I CCSGG 1 cut(s) 894
AsuHPI GGTGA 3 cut(s) 532, 1082, 1112
AvaI CYCGRG 1 cut(s) 128
AvaII GGWCC 1 cut(s) 187
BamHI GGATCC 1 cut(s) 244
BanI GGYRCC 1 cut(s) 110
BanII GRGCYC 1 cut(s) 71
BarI GAAGNNNNNNTAC 2 cut(s) 556, 588
BbsI GAAGAC 2 cut(s) 140, 571
Bbv12I GWGCWC 2 cut(s) 71, 363
BbvCI CCTCAGC 1 cut(s) 183
BbvI GCAGC 4 cut(s) 70, 151, 763, 1063
BccI CCATC 5 cut(s) 251, 320, 426, 517, 667
BceAI ACGGC 2 cut(s) 98, 106
BciT130I CCWGG 1 cut(s) 77
BciVI GTATCC 1 cut(s) 981
BcnI CCSGG 1 cut(s) 894
BcoDI GTCTC 1 cut(s) 202
BfaI CTAG 3 cut(s) 6, 96, 650
BfoI RGCGCY 1 cut(s) 114
BfuAI ACCTGC 1 cut(s) 990
BfuI GTATCC 1 cut(s) 981
BisI GCNGC 5 cut(s) 29, 59, 165, 777, 1077
BlsI GCNGC 5 cut(s) 30, 60, 166, 778, 1078
Bme1390I CCNGG 2 cut(s) 77, 894
Bme18I GGWCC 1 cut(s) 187
BmeRI GACNNNNNGTC 1 cut(s) 401
BmeT110I CYCGRG 1 cut(s) 128
BmgT120I GGNCC 3 cut(s) 39, 79, 187
BmiI GGNNCC 5 cut(s) 93, 112, 189, 246, 836
BmrFI CCNGG 2 cut(s) 77, 894
BmsI GCATC 3 cut(s) 139, 532, 1132
BpiI GAAGAC 2 cut(s) 140, 571
BpmI CTGGAG 1 cut(s) 184
Bpu10I CCTNAGC 2 cut(s) 62, 183
BpuEI CTTGAG 1 cut(s) 523
BpuMI CCSGG 1 cut(s) 894
Bsa29I ATCGAT 2 cut(s) 147, 1156
BsaBI GATNNNNATC 2 cut(s) 345, 546
BsaHI GRCGYC 1 cut(s) 111
BsaJI CCNNGG 2 cut(s) 76, 726
BsaWI WCCGGW 1 cut(s) 602
Bsc4I CCNNNNNNNGG 3 cut(s) 88, 128, 421
Bse118I RCCGGY 2 cut(s) 107, 602
Bse1I ACTGG 1 cut(s) 289
Bse8I GATNNNNATC 2 cut(s) 345, 546
BseBI CCWGG 1 cut(s) 77
BseCI ATCGAT 2 cut(s) 147, 1156
BseDI CCNNGG 2 cut(s) 76, 726
BseJI GATNNNNATC 2 cut(s) 345, 546
BseLI CCNNNNNNNGG 3 cut(s) 88, 128, 421
BseMII CTCAG 2 cut(s) 76, 174
BseNI ACTGG 1 cut(s) 289
BseRI GAGGAG 1 cut(s) 593
BseXI GCAGC 4 cut(s) 70, 151, 763, 1063
BsgI GTGCAG 2 cut(s) 696, 994
BshFI GGCC 3 cut(s) 41, 75, 81
BshNI GGYRCC 1 cut(s) 110
BshTI ACCGGT 1 cut(s) 602
BshVI ATCGAT 2 cut(s) 147, 1156
BsiHKAI GWGCWC 2 cut(s) 71, 363
BsiHKCI CYCGRG 1 cut(s) 128
BsiSI CCGG 4 cut(s) 72, 108, 603, 894
BslFI GGGAC 2 cut(s) 101, 629
BslI CCNNNNNNNGG 3 cut(s) 88, 128, 421
BsmAI GTCTC 1 cut(s) 202
BsmBI CGTCTC 1 cut(s) 202
BsmFI GGGAC 2 cut(s) 101, 629
BsnI GGCC 3 cut(s) 41, 75, 81
BsoBI CYCGRG 1 cut(s) 128
Bsp1286I GDGCHC 2 cut(s) 71, 363
Bsp143I GATC 9 cut(s) 153, 244, 340, 547, 790, 904, 1021, 1026, 1153
BspACI CCGC 7 cut(s) 28, 37, 52, 119, 779, 985, 1087
BspANI GGCC 3 cut(s) 41, 75, 81
BspCNI CTCAG 2 cut(s) 75, 175
BspDI ATCGAT 2 cut(s) 147, 1156
BspLI GGNNCC 5 cut(s) 93, 112, 189, 246, 836
BspMI ACCTGC 1 cut(s) 990
BspPI GGATC 5 cut(s) 239, 252, 542, 899, 1034
BspT107I GGYRCC 1 cut(s) 110
BsrFI RCCGGY 2 cut(s) 107, 602
BsrI ACTGG 1 cut(s) 289
BssAI RCCGGY 2 cut(s) 107, 602
BssECI CCNNGG 2 cut(s) 76, 726
BssMI GATC 9 cut(s) 153, 244, 340, 547, 790, 904, 1021, 1026, 1153
BssNAI GTATAC 2 cut(s) 723, 890
BssNI GRCGYC 1 cut(s) 111
Bst1107I GTATAC 2 cut(s) 723, 890
Bst2UI CCWGG 1 cut(s) 77
BstACI GRCGYC 1 cut(s) 111
BstAPI GCANNNNNTGC 1 cut(s) 710
BstC8I GCNNGC 3 cut(s) 39, 109, 219
BstDEI CTNAG 3 cut(s) 62, 183, 716
BstH2I RGCGCY 1 cut(s) 114
BstHHI GCGC 2 cut(s) 113, 235
BstKTI GATC 9 cut(s) 156, 247, 343, 550, 793, 907, 1024, 1029, 1156
BstMAI GTCTC 1 cut(s) 202
BstMBI GATC 9 cut(s) 153, 244, 340, 547, 790, 904, 1021, 1026, 1153
BstMWI GCNNNNNNNGC 7 cut(s) 34, 43, 58, 170, 179, 388, 710
BstNI CCWGG 1 cut(s) 77
BstNSI RCATGY 1 cut(s) 787
BstSCI CCNGG 2 cut(s) 75, 892
BstV1I GCAGC 4 cut(s) 70, 151, 763, 1063
BstV2I GAAGAC 2 cut(s) 140, 571
BstX2I RGATCY 1 cut(s) 244
BstYI RGATCY 1 cut(s) 244
BstZ17I GTATAC 2 cut(s) 723, 890
Bsu15I ATCGAT 2 cut(s) 147, 1156
BsuI GTATCC 1 cut(s) 981
BsuRI GGCC 3 cut(s) 41, 75, 81
BsuTUI ATCGAT 2 cut(s) 147, 1156
BveI ACCTGC 1 cut(s) 990
Cac8I GCNNGC 3 cut(s) 39, 109, 219
CfoI GCGC 2 cut(s) 113, 235
Cfr10I RCCGGY 2 cut(s) 107, 602
Cfr13I GGNCC 3 cut(s) 39, 79, 187
ClaI ATCGAT 2 cut(s) 147, 1156
CseI GACGC 1 cut(s) 179
Csp6I GTAC 1 cut(s) 1054
CspAI ACCGGT 1 cut(s) 602
CviAII CATG 3 cut(s) 83, 784, 999
CviQI GTAC 1 cut(s) 1054
DdeI CTNAG 3 cut(s) 62, 183, 716
DinI GGCGCC 1 cut(s) 112
DpnI GATC 9 cut(s) 155, 246, 342, 549, 792, 906, 1023, 1028, 1155
DpnII GATC 9 cut(s) 153, 244, 340, 547, 790, 904, 1021, 1026, 1153
DrdI GACNNNNNNGTC 1 cut(s) 194
DriI GACNNNNNGTC 1 cut(s) 401
DseDI GACNNNNNNGTC 1 cut(s) 194
EaeI YGGCCR 1 cut(s) 73
Eam1105I GACNNNNNGTC 1 cut(s) 401
Ecl136II GAGCTC 1 cut(s) 69
Eco24I GRGCYC 1 cut(s) 71
Eco32I GATATC 2 cut(s) 412, 762
Eco47I GGWCC 1 cut(s) 187
Eco53kI GAGCTC 1 cut(s) 69
Eco57I CTGAAG 1 cut(s) 257
Eco88I CYCGRG 1 cut(s) 128
EcoICRI GAGCTC 1 cut(s) 69
EcoO109I RGGNCCY 1 cut(s) 187
EcoRI GAATTC 1 cut(s) 731
EcoRII CCWGG 1 cut(s) 75
EcoRV GATATC 2 cut(s) 412, 762
EcoT38I GRGCYC 1 cut(s) 71
EgeI GGCGCC 1 cut(s) 112
EheI GGCGCC 1 cut(s) 112
Esp3I CGTCTC 1 cut(s) 202
FaeI CATG 3 cut(s) 86, 787, 1002
FaqI GGGAC 2 cut(s) 101, 629
FatI CATG 3 cut(s) 82, 783, 998
FauI CCCGC 3 cut(s) 30, 45, 126
FauNDI CATATG 1 cut(s) 1125
FblI GTMKAC 2 cut(s) 722, 889
Fnu4HI GCNGC 5 cut(s) 29, 59, 165, 777, 1077
FriOI GRGCYC 1 cut(s) 71
Fsp4HI GCNGC 5 cut(s) 29, 59, 165, 777, 1077
FspBI CTAG 3 cut(s) 6, 96, 650
GlaI GCGC 2 cut(s) 112, 234
GluI GCNGC 5 cut(s) 29, 59, 165, 777, 1077
GsuI CTGGAG 1 cut(s) 184
HaeII RGCGCY 1 cut(s) 114
HaeIII GGCC 3 cut(s) 41, 75, 81
HapII CCGG 4 cut(s) 72, 108, 603, 894
HgaI GACGC 1 cut(s) 179
HhaI GCGC 2 cut(s) 113, 235
Hin1I GRCGYC 1 cut(s) 111
Hin1II CATG 3 cut(s) 86, 787, 1002
Hin6I GCGC 2 cut(s) 111, 233
HinP1I GCGC 2 cut(s) 111, 233
HinfI GANTC 4 cut(s) 102, 346, 402, 440
HpaII CCGG 4 cut(s) 72, 108, 603, 894
HphI GGTGA 3 cut(s) 532, 1082, 1112
Hpy166II GTNNAC 4 cut(s) 13, 723, 890, 1010
Hpy188I TCNGA 6 cut(s) 249, 345, 819, 945, 1026, 1062
Hpy8I GTNNAC 4 cut(s) 13, 723, 890, 1010
Hpy99I CGWCG 3 cut(s) 127, 173, 396
HpyCH4IV ACGT 1 cut(s) 195
HpyF10VI GCNNNNNNNGC 7 cut(s) 34, 43, 58, 170, 179, 388, 710
HpyF3I CTNAG 3 cut(s) 62, 183, 716
HpySE526I ACGT 1 cut(s) 195
Hsp92I GRCGYC 1 cut(s) 111
Hsp92II CATG 3 cut(s) 86, 787, 1002
HspAI GCGC 2 cut(s) 111, 233
KasI GGCGCC 1 cut(s) 110
KroI GCCGGC 1 cut(s) 107
KroNI GCCGGC 1 cut(s) 109
Kzo9I GATC 9 cut(s) 153, 244, 340, 547, 790, 904, 1021, 1026, 1153
LmnI GCTCC 4 cut(s) 55, 66, 74, 622
Lsp1109I GCAGC 4 cut(s) 70, 151, 763, 1063
LweI GCATC 3 cut(s) 139, 532, 1132
MaeI CTAG 3 cut(s) 6, 96, 650
MaeII ACGT 1 cut(s) 195
MalI GATC 9 cut(s) 155, 246, 342, 549, 792, 906, 1023, 1028, 1155
MboI GATC 9 cut(s) 153, 244, 340, 547, 790, 904, 1021, 1026, 1153
MboII GAAGA 5 cut(s) 145, 263, 576, 785, 1085
MfeI CAATTG 5 cut(s) 19, 492, 675, 861, 1017
MflI RGATCY 1 cut(s) 244
MhlI GDGCHC 2 cut(s) 71, 363
MluCI AATT 8 cut(s) 19, 204, 492, 675, 731, 861, 958, 1017
Mly113I GGCGCC 1 cut(s) 111
MlyI GAGTC 1 cut(s) 411
MmeI TCCRAC 1 cut(s) 541
MreI CGCCGGCG 1 cut(s) 107
MroNI GCCGGC 1 cut(s) 107
MseI TTAA 3 cut(s) 279, 534, 594
MspI CCGG 4 cut(s) 72, 108, 603, 894
MspR9I CCNGG 2 cut(s) 77, 894
MunI CAATTG 5 cut(s) 19, 492, 675, 861, 1017
MvaI CCWGG 1 cut(s) 77
MwoI GCNNNNNNNGC 7 cut(s) 34, 43, 58, 170, 179, 388, 710
NaeI GCCGGC 1 cut(s) 109
NarI GGCGCC 1 cut(s) 111
NciI CCSGG 1 cut(s) 894
NdeI CATATG 1 cut(s) 1125
NdeII GATC 9 cut(s) 153, 244, 340, 547, 790, 904, 1021, 1026, 1153
NgoMIV GCCGGC 1 cut(s) 107
NlaIII CATG 3 cut(s) 86, 787, 1002
NlaIV GGNNCC 5 cut(s) 93, 112, 189, 246, 836
NmeAIII GCCGAG 1 cut(s) 859
NspI RCATGY 1 cut(s) 787
PciI ACATGT 1 cut(s) 783
PcsI WCGNNNNNNNCGW 1 cut(s) 111
PdiI GCCGGC 1 cut(s) 109
PfeI GAWTC 3 cut(s) 102, 346, 440
PinAI ACCGGT 1 cut(s) 602
PkrI GCNGC 5 cut(s) 30, 60, 166, 778, 1078
PleI GAGTC 1 cut(s) 410
PluTI GGCGCC 1 cut(s) 114
PpsI GAGTC 1 cut(s) 410
PpuMI RGGWCCY 1 cut(s) 187
PscI ACATGT 1 cut(s) 783
Psp124BI GAGCTC 1 cut(s) 71
Psp5II RGGWCCY 1 cut(s) 187
Psp6I CCWGG 1 cut(s) 75
PspGI CCWGG 1 cut(s) 75
PspN4I GGNNCC 5 cut(s) 93, 112, 189, 246, 836
PspPI GGNCC 3 cut(s) 39, 79, 187
PspPPI RGGWCCY 1 cut(s) 187
PsuI RGATCY 1 cut(s) 244
RsaI GTAC 1 cut(s) 1055
RsaNI GTAC 1 cut(s) 1054
SacI GAGCTC 1 cut(s) 71
SaqAI TTAA 3 cut(s) 279, 534, 594
SatI GCNGC 5 cut(s) 29, 59, 165, 777, 1077
Sau3AI GATC 9 cut(s) 153, 244, 340, 547, 790, 904, 1021, 1026, 1153
Sau96I GGNCC 3 cut(s) 39, 79, 187
SchI GAGTC 1 cut(s) 411
ScrFI CCNGG 2 cut(s) 77, 894
SduI GDGCHC 2 cut(s) 71, 363
SfaNI GCATC 3 cut(s) 139, 532, 1132
SfoI GGCGCC 1 cut(s) 112
SgrAI CRCCGGYG 2 cut(s) 107, 602
SinI GGWCC 1 cut(s) 187
SmlI CTYRAG 1 cut(s) 502
SmoI CTYRAG 1 cut(s) 502
Sse9I AATT 8 cut(s) 19, 204, 492, 675, 731, 861, 958, 1017
SsiI CCGC 7 cut(s) 28, 37, 52, 119, 779, 985, 1087
SspDI GGCGCC 1 cut(s) 110
SspI AATATT 1 cut(s) 1149
SspMI CTAG 3 cut(s) 6, 96, 650
SstI GAGCTC 1 cut(s) 71
StyD4I CCNGG 2 cut(s) 75, 892
TaiI ACGT 1 cut(s) 198
TaqI TCGA 3 cut(s) 147, 405, 1156
TasI AATT 8 cut(s) 19, 204, 492, 675, 731, 861, 958, 1017
TatI WGTACW 1 cut(s) 1053
TauI GCSGC 1 cut(s) 31
TfiI GAWTC 3 cut(s) 102, 346, 440
Tru1I TTAA 3 cut(s) 279, 534, 594
Tru9I TTAA 3 cut(s) 279, 534, 594
TseI GCWGC 4 cut(s) 58, 164, 776, 1076
TspDTI ATGAA 1 cut(s) 497
VpaK11BI GGWCC 1 cut(s) 187
XapI RAATTY 2 cut(s) 204, 731
XbaI TCTAGA 1 cut(s) 649
XceI RCATGY 1 cut(s) 787
XmiI GTMKAC 2 cut(s) 722, 889
XspI CTAG 3 cut(s) 6, 96, 650
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.