pycom06g14120

callose synthase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr6
Physical Location & Seq
Forward (+)
18983553 .. 18993264
9712 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom06g14120.11

Sequence Viewer

Length: 1599 bp
ATGAAACATTGGCTGCGGTCAGAAGCTGCCAGAAACAATAATGGGAAAGCTGCACATTCAGCATGGAGGAATTATGATGACTTTAATGAATACTTTTGGTCACCTGCTTGTTTTGGATTGAGCTGGCCTATGAGGAGGGATTCACCATTTTTGTTGAAACCTAAAAAGGGAAAAAGGACCGGAAAAAGCACTTTCGTTGAGCATCGGACCTTTTTTCACCTGTATCGAAGTTTCCATCGCCTGTGGATCTTTTTAGCTTTGATGTTCCAGGCTTTGGCAATTATAGCCTTTAATAAAGGACGCATCAATTTGGATACTATTAAGACAGTCCTTAGCATTGGGCCAACTTTTGCCATCATGAACTTCATAGAGAGTTTTTTGGATGTGGTGCTCATGTTTGGAGCTTACACCACAGCCAGAGGCATGGCTATCTCTAGACTTGTGATTAGATTTTTCTGGTTTGGCTTGAGCTCTGTTGCTGTGACATATATCTACCTGAAAGTTCTGCAGGAAAGAAATGACAGAAACTCCGATTCATTTTACTTTCGGATATATATTCTTGTATTGGGTGTTTATGCAGCTTTGCGCTTGGGCCTTGCGCTATTGCTTAAGTTTCCAGGATGTCATAAAATTTCTGAGATGTCTGATCAATCCTTCTTCCAATTTTTTAAGTGGATTTATCAGGAGCGTTACTTTGTTGGACGTGGTCTTTATGAGAAGATGAGCGATTATTGCAGATATGTGCTCTTTTGGTTGGTGATTTTCATCTGCAAGTTCACCTTTACCTACTTTCTACAGATTAAACCTCTTGTTGAACCCACAAAAATTATTGTGAACCTTCCATCTCTGCAATACGCATGGCATGATTTGATGTCAAAGAACAACCATAACGCATTGACTGTAGCTTGCCTATGGGCTCCTGTTGTGGGTATCTATCTAATGGATTTTTACATATGGTACACCCTCCTGTCAGCCATAATTGGTGGTGTGATCGGTGCAAGAGCTCGGTTGGGCGAGATACGTTCGATTGAAATGGTGCATAAACGCTTTGAGAGTTTTCCAGAAGCTTTTGACAAGAATCTTGTCTCACAAAATAAAAGGTTGCCGTTTAACACTCAGTCATCCCAGGATTCTCAAGATCCAAACAAGATGTATGCAGCCACCTTTTCCCCATTTTGGAATGAGATAATCAAAAGCTTGCGAGAGGAGGATTTTATTAGTAATAGGGAGATGGATTTGCTATGTATACCTAGCAACACAGGAAGTCTAAAATTAGTTCAATGGCCCTTGTTTCTTCTGAGTAGTAAGATTTTACTGGCAATTGATTTGGCTTTGGACTGCAAAGATACACAGGCAGATCTTTGGAATAGAATCTGTAGGGATGAGTACATGGCATATGCAGTTCAGGAAGTCTACTACAGTATTGAAAAGATATTATATTCTCTGGTTGATGGTGAAGGGAAACTTTGGGTTGAAAGGATCTACCGCGAGATCAACAACAGTATTATGGAGGGTTCTCTCGTCATAACTTTAACCCTTAAGAAGCTTCCGCAAGTGTTACAGAAACTTACAGCTTTAACTGGGCTGCTGACGCAATGA

Protein Analysis

533

Amino Acids

62.17

Weight (kDa)

9.31

Isoelectric Point (pI)

48.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 112
Acc36I ACCTGC 1 cut(s) 112
AccB7I CCANNNNNTGG 1 cut(s) 274
AccI GTMKAC 2 cut(s) 1246, 1413
AccII CGCG 1 cut(s) 1488
AciI CCGC 3 cut(s) 16, 1486, 1550
AclWI GGATC 3 cut(s) 254, 1133, 1487
AcsI RAATTY 1 cut(s) 630
AfaI GTAC 2 cut(s) 959, 1388
AfiI CCNNNNNNNGG 4 cut(s) 167, 274, 926, 1176
AflII CTTAAG 2 cut(s) 608, 1538
AgsI TTSAA 6 cut(s) 157, 815, 1031, 1280, 1427, 1475
AjiI CACGTC 1 cut(s) 704
AjnI CCWGG 3 cut(s) 267, 616, 1125
Alw21I GWGCWC 4 cut(s) 393, 473, 747, 1006
Alw26I GTCTC 1 cut(s) 1090
AlwI GGATC 3 cut(s) 254, 1133, 1487
AlwNI CAGNNNCTG 1 cut(s) 26
AoxI GGCC 4 cut(s) 125, 341, 592, 1283
ApeKI GCWGC 6 cut(s) 13, 26, 50, 578, 1157, 1585
ApoI RAATTY 1 cut(s) 630
AspLEI GCGC 2 cut(s) 588, 601
AspS9I GGNCC 5 cut(s) 177, 207, 341, 592, 1284
AsuHPI GGTGA 6 cut(s) 93, 135, 209, 769, 769, 1466
AvaII GGWCC 2 cut(s) 177, 207
BanII GRGCYC 3 cut(s) 473, 919, 1006
Bbv12I GWGCWC 4 cut(s) 393, 473, 747, 1006
BbvI GCAGC 5 cut(s) 13, 37, 590, 1169, 1572
BccI CCATC 5 cut(s) 243, 362, 850, 1225, 1445
BceAI ACGGC 1 cut(s) 1090
BciT130I CCWGG 3 cut(s) 269, 618, 1127
BciVI GTATCC 1 cut(s) 307
BclI TGATCA 1 cut(s) 646
BcoDI GTCTC 1 cut(s) 1090
BfaI CTAG 2 cut(s) 435, 1251
BfmI CTRYAG 5 cut(s) 506, 794, 900, 1375, 1417
BfrI CTTAAG 2 cut(s) 608, 1538
BfuAI ACCTGC 1 cut(s) 112
BfuI GTATCC 1 cut(s) 307
BglII AGATCT 1 cut(s) 1357
BisI GCNGC 6 cut(s) 14, 27, 51, 579, 1158, 1586
BlsI GCNGC 6 cut(s) 15, 28, 52, 580, 1159, 1587
Bme1390I CCNGG 3 cut(s) 269, 618, 1127
Bme18I GGWCC 2 cut(s) 177, 207
BmgBI CACGTC 1 cut(s) 704
BmgT120I GGNCC 5 cut(s) 177, 207, 341, 592, 1284
BmiI GGNNCC 1 cut(s) 918
BmrFI CCNGG 3 cut(s) 269, 618, 1127
BmrI ACTGGG 1 cut(s) 1590
BmsI GCATC 2 cut(s) 211, 312
BmuI ACTGGG 1 cut(s) 1590
Bpu10I CCTNAGC 1 cut(s) 332
BpuEI CTTGAG 2 cut(s) 487, 1119
BsaBI GATNNNNATC 1 cut(s) 764
BsaJI CCNNGG 1 cut(s) 1125
BsaWI WCCGGW 1 cut(s) 179
BsaXI ACNNNNNCTCC 2 cut(s) 512, 542
Bsc4I CCNNNNNNNGG 4 cut(s) 167, 274, 926, 1176
Bse1I ACTGG 2 cut(s) 1320, 1585
Bse8I GATNNNNATC 1 cut(s) 764
BseBI CCWGG 3 cut(s) 269, 618, 1127
BseDI CCNNGG 1 cut(s) 1125
BseGI GGATG 4 cut(s) 388, 626, 1121, 1387
BseJI GATNNNNATC 1 cut(s) 764
BseLI CCNNNNNNNGG 4 cut(s) 167, 274, 926, 1176
BseMII CTCAG 3 cut(s) 627, 1130, 1289
BseNI ACTGG 2 cut(s) 1320, 1585
BseRI GAGGAG 2 cut(s) 148, 1220
BseXI GCAGC 5 cut(s) 13, 37, 590, 1169, 1572
BsgI GTGCAG 1 cut(s) 36
Bsh1236I CGCG 1 cut(s) 1488
BshFI GGCC 4 cut(s) 127, 343, 594, 1285
BsiHKAI GWGCWC 4 cut(s) 393, 473, 747, 1006
BsiSI CCGG 1 cut(s) 180
BslI CCNNNNNNNGG 4 cut(s) 167, 274, 926, 1176
BsmAI GTCTC 1 cut(s) 1090
BsnI GGCC 4 cut(s) 127, 343, 594, 1285
Bsp1286I GDGCHC 5 cut(s) 393, 473, 747, 919, 1006
Bsp143I GATC 7 cut(s) 246, 646, 990, 1138, 1357, 1479, 1491
BspACI CCGC 3 cut(s) 16, 1486, 1550
BspANI GGCC 4 cut(s) 127, 343, 594, 1285
BspCNI CTCAG 3 cut(s) 628, 1129, 1290
BspFNI CGCG 1 cut(s) 1488
BspHI TCATGA 1 cut(s) 357
BspLI GGNNCC 1 cut(s) 918
BspMAI CTGCAG 1 cut(s) 510
BspMI ACCTGC 1 cut(s) 112
BspPI GGATC 3 cut(s) 254, 1133, 1487
BspTI CTTAAG 2 cut(s) 608, 1538
BsrI ACTGG 2 cut(s) 1320, 1585
BssECI CCNNGG 1 cut(s) 1125
BssMI GATC 7 cut(s) 246, 646, 990, 1138, 1357, 1479, 1491
BssNAI GTATAC 1 cut(s) 1247
Bst1107I GTATAC 1 cut(s) 1247
Bst2UI CCWGG 3 cut(s) 269, 618, 1127
Bst4CI ACNGT 4 cut(s) 328, 901, 1421, 1502
BstAFI CTTAAG 2 cut(s) 608, 1538
BstC8I GCNNGC 3 cut(s) 125, 907, 1199
BstDEI CTNAG 4 cut(s) 332, 636, 1116, 1298
BstEII GGTNACC 1 cut(s) 99
BstF5I GGATG 4 cut(s) 388, 626, 1121, 1387
BstFNI CGCG 1 cut(s) 1488
BstHHI GCGC 2 cut(s) 588, 601
BstKTI GATC 7 cut(s) 249, 649, 993, 1141, 1360, 1482, 1494
BstMAI GTCTC 1 cut(s) 1090
BstMBI GATC 7 cut(s) 246, 646, 990, 1138, 1357, 1479, 1491
BstMWI GCNNNNNNNGC 4 cut(s) 59, 284, 732, 1591
BstNI CCWGG 3 cut(s) 269, 618, 1127
BstPI GGTNACC 1 cut(s) 99
BstSCI CCNGG 3 cut(s) 267, 616, 1125
BstSFI CTRYAG 5 cut(s) 506, 794, 900, 1375, 1417
BstUI CGCG 1 cut(s) 1488
BstV1I GCAGC 5 cut(s) 13, 37, 590, 1169, 1572
BstX2I RGATCY 4 cut(s) 246, 1138, 1357, 1479
BstXI CCANNNNNNTGG 1 cut(s) 424
BstYI RGATCY 4 cut(s) 246, 1138, 1357, 1479
BstZ17I GTATAC 1 cut(s) 1247
BsuI GTATCC 1 cut(s) 307
BsuRI GGCC 4 cut(s) 127, 343, 594, 1285
BtgZI GCGATG 1 cut(s) 221
BtrI CACGTC 1 cut(s) 704
BtsCI GGATG 4 cut(s) 388, 626, 1121, 1387
BveI ACCTGC 1 cut(s) 112
Cac8I GCNNGC 3 cut(s) 125, 907, 1199
CaiI CAGNNNCTG 1 cut(s) 26
CciI TCATGA 1 cut(s) 357
CfoI GCGC 2 cut(s) 588, 601
Cfr13I GGNCC 5 cut(s) 177, 207, 341, 592, 1284
CseI GACGC 1 cut(s) 309
Csp6I GTAC 2 cut(s) 958, 1387
CviAII CATG 7 cut(s) 63, 358, 394, 424, 858, 863, 1390
CviQI GTAC 2 cut(s) 958, 1387
DdeI CTNAG 4 cut(s) 332, 636, 1116, 1298
DpnI GATC 7 cut(s) 248, 648, 992, 1140, 1359, 1481, 1493
DpnII GATC 7 cut(s) 246, 646, 990, 1138, 1357, 1479, 1491
Ecl136II GAGCTC 2 cut(s) 471, 1004
Eco24I GRGCYC 3 cut(s) 473, 919, 1006
Eco47I GGWCC 2 cut(s) 177, 207
Eco53kI GAGCTC 2 cut(s) 471, 1004
Eco91I GGTNACC 1 cut(s) 99
EcoICRI GAGCTC 2 cut(s) 471, 1004
EcoO65I GGTNACC 1 cut(s) 99
EcoRII CCWGG 3 cut(s) 267, 616, 1125
EcoT38I GRGCYC 3 cut(s) 473, 919, 1006
FaeI CATG 7 cut(s) 66, 361, 397, 427, 861, 866, 1393
FalI AAGNNNNNCTT 4 cut(s) 764, 796, 1449, 1481
FatI CATG 7 cut(s) 62, 357, 393, 423, 857, 862, 1389
FauNDI CATATG 2 cut(s) 953, 1396
FbaI TGATCA 1 cut(s) 646
FblI GTMKAC 2 cut(s) 1246, 1413
Fnu4HI GCNGC 6 cut(s) 14, 27, 51, 579, 1158, 1586
FokI GGATG 4 cut(s) 395, 633, 1108, 1394
FriOI GRGCYC 3 cut(s) 473, 919, 1006
Fsp4HI GCNGC 6 cut(s) 14, 27, 51, 579, 1158, 1586
FspBI CTAG 2 cut(s) 435, 1251
GlaI GCGC 2 cut(s) 587, 600
GluI GCNGC 6 cut(s) 14, 27, 51, 579, 1158, 1586
HaeIII GGCC 4 cut(s) 127, 343, 594, 1285
HapII CCGG 1 cut(s) 180
HgaI GACGC 1 cut(s) 309
HhaI GCGC 2 cut(s) 588, 601
Hin1II CATG 7 cut(s) 66, 361, 397, 427, 861, 866, 1393
Hin6I GCGC 2 cut(s) 586, 599
HinP1I GCGC 2 cut(s) 586, 599
HindIII AAGCTT 3 cut(s) 1065, 1195, 1544
HinfI GANTC 5 cut(s) 140, 533, 1078, 1130, 1371
HpaII CCGG 1 cut(s) 180
HphI GGTGA 6 cut(s) 93, 135, 209, 769, 769, 1466
Hpy166II GTNNAC 5 cut(s) 777, 835, 960, 1247, 1414
Hpy188I TCNGA 7 cut(s) 22, 207, 532, 549, 637, 646, 1299
Hpy188III TCNNGA 6 cut(s) 358, 435, 683, 1061, 1136, 1406
Hpy8I GTNNAC 5 cut(s) 777, 835, 960, 1247, 1414
HpyAV CCTTC 3 cut(s) 664, 848, 1451
HpyCH4III ACNGT 4 cut(s) 328, 901, 1421, 1502
HpyCH4IV ACGT 2 cut(s) 703, 1021
HpyF10VI GCNNNNNNNGC 4 cut(s) 59, 284, 732, 1591
HpyF3I CTNAG 4 cut(s) 332, 636, 1116, 1298
HpySE526I ACGT 2 cut(s) 703, 1021
Hsp92II CATG 7 cut(s) 66, 361, 397, 427, 861, 866, 1393
HspAI GCGC 2 cut(s) 586, 599
Ksp22I TGATCA 1 cut(s) 646
Kzo9I GATC 7 cut(s) 246, 646, 990, 1138, 1357, 1479, 1491
LmnI GCTCC 3 cut(s) 401, 685, 922
Lsp1109I GCAGC 5 cut(s) 13, 37, 590, 1169, 1572
LweI GCATC 2 cut(s) 211, 312
MaeI CTAG 2 cut(s) 435, 1251
MaeII ACGT 2 cut(s) 703, 1021
MaeIII GTNAC 4 cut(s) 99, 481, 689, 1557
MalI GATC 7 cut(s) 248, 648, 992, 1140, 1359, 1481, 1493
MboI GATC 7 cut(s) 246, 646, 990, 1138, 1357, 1479, 1491
MboII GAAGA 3 cut(s) 649, 730, 1286
MfeI CAATTG 1 cut(s) 1320
MflI RGATCY 4 cut(s) 246, 1138, 1357, 1479
MhlI GDGCHC 5 cut(s) 393, 473, 747, 919, 1006
MluCI AATT 9 cut(s) 70, 279, 307, 630, 662, 825, 978, 1271, 1320
MmeI TCCRAC 1 cut(s) 679
MnlI CCTC 9 cut(s) 60, 126, 129, 413, 816, 974, 1198, 1201, 1504
MspCI CTTAAG 2 cut(s) 608, 1538
MspI CCGG 1 cut(s) 180
MspR9I CCNGG 3 cut(s) 269, 618, 1127
MunI CAATTG 1 cut(s) 1320
MvaI CCWGG 3 cut(s) 269, 618, 1127
MvnI CGCG 1 cut(s) 1488
MwoI GCNNNNNNNGC 4 cut(s) 59, 284, 732, 1591
NdeI CATATG 2 cut(s) 953, 1396
NdeII GATC 7 cut(s) 246, 646, 990, 1138, 1357, 1479, 1491
NlaIII CATG 7 cut(s) 66, 361, 397, 427, 861, 866, 1393
NlaIV GGNNCC 1 cut(s) 918
NmuCI GTSAC 2 cut(s) 99, 481
PagI TCATGA 1 cut(s) 357
PaqCI CACCTGC 1 cut(s) 112
PfeI GAWTC 5 cut(s) 140, 533, 1078, 1130, 1371
PflFI GACNNNGTC 1 cut(s) 705
PflMI CCANNNNNTGG 1 cut(s) 274
PfoI TCCNGGA 1 cut(s) 616
PkrI GCNGC 6 cut(s) 15, 28, 52, 580, 1159, 1587
Psp124BI GAGCTC 2 cut(s) 473, 1006
Psp6I CCWGG 3 cut(s) 267, 616, 1125
PspEI GGTNACC 1 cut(s) 99
PspGI CCWGG 3 cut(s) 267, 616, 1125
PspN4I GGNNCC 1 cut(s) 918
PspPI GGNCC 5 cut(s) 177, 207, 341, 592, 1284
PstI CTGCAG 1 cut(s) 510
PstNI CAGNNNCTG 1 cut(s) 26
PsuI RGATCY 4 cut(s) 246, 1138, 1357, 1479
PsyI GACNNNGTC 1 cut(s) 705
RsaI GTAC 2 cut(s) 959, 1388
RsaNI GTAC 2 cut(s) 958, 1387
SacI GAGCTC 2 cut(s) 473, 1006
SatI GCNGC 6 cut(s) 14, 27, 51, 579, 1158, 1586
Sau3AI GATC 7 cut(s) 246, 646, 990, 1138, 1357, 1479, 1491
Sau96I GGNCC 5 cut(s) 177, 207, 341, 592, 1284
ScrFI CCNGG 3 cut(s) 269, 618, 1127
SduI GDGCHC 5 cut(s) 393, 473, 747, 919, 1006
SfaNI GCATC 2 cut(s) 211, 312
SfcI CTRYAG 5 cut(s) 506, 794, 900, 1375, 1417
SinI GGWCC 2 cut(s) 177, 207
SmlI CTYRAG 4 cut(s) 466, 608, 1134, 1538
SmoI CTYRAG 4 cut(s) 466, 608, 1134, 1538
Sse9I AATT 9 cut(s) 70, 279, 307, 630, 662, 825, 978, 1271, 1320
SsiI CCGC 3 cut(s) 16, 1486, 1550
SspMI CTAG 2 cut(s) 435, 1251
SstI GAGCTC 2 cut(s) 473, 1006
StyD4I CCNGG 3 cut(s) 267, 616, 1125
TaaI ACNGT 4 cut(s) 328, 901, 1421, 1502
TaiI ACGT 2 cut(s) 706, 1024
TaqI TCGA 2 cut(s) 226, 1025
TasI AATT 9 cut(s) 70, 279, 307, 630, 662, 825, 978, 1271, 1320
TatI WGTACW 1 cut(s) 1386
TfiI GAWTC 5 cut(s) 140, 533, 1078, 1130, 1371
TseFI GTSAC 2 cut(s) 99, 481
TseI GCWGC 6 cut(s) 13, 26, 50, 578, 1157, 1585
Tsp45I GTSAC 2 cut(s) 99, 481
TspDTI ATGAA 6 cut(s) 17, 102, 355, 374, 525, 754
Tth111I GACNNNGTC 1 cut(s) 705
Van91I CCANNNNNTGG 1 cut(s) 274
Vha464I CTTAAG 2 cut(s) 608, 1538
VpaK11BI GGWCC 2 cut(s) 177, 207
XapI RAATTY 1 cut(s) 630
XbaI TCTAGA 1 cut(s) 434
XmiI GTMKAC 2 cut(s) 1246, 1413
XspI CTAG 2 cut(s) 435, 1251
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.