Rh7DG121000

callose synthase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Forward (+)
10260623 .. 10283810
23188 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG121000.1

Sequence Viewer

Length: 5301 bp
ATGGCTAGGGTTTACGACAATTGGGAGCGGCTGGTGCGAGCCACGCTCAAGAGAGAGCAGCTCAGAACTTCCGGCCAAGGCCATGAGAGGGCTCCGAGTGGAATCGCCAGCGCTGTTCCGTCGTCGCTGGGCAAGGTCTCGAATATCGATTTGATCTTGCAGGCTGCCGATGAAATTCAAGCCGAGGATGCAAACGTCTCCAGAATTCTGTGTGAGCAGGCGTATAGTATGGCGCAAAATCTTGACCCTACTAGTGATGGAAGAGGAGTTCTTCAGTTTAAGACTGGTTTGATGTCTGTAATTAAGCAAAAACTTGCGAAAAGGGATGGGGGTCAAATAGATCGCAATCGTGATATTGAGTACCTCTGGGAATTTTACCAGCGCTACAAGCGACGACATCACCTGGAGGATATCCAGAGGGAGGAGGAGAGAATGCGTGAATCTGGCACTTTTAGTGCTAACTTTGGAGGCTATAACGAGATGAAAAAGACAATTGCTATCCTGAGGGCATTGATTGAGGTGATGGAGTTGCTCAGCAAAGATGCAGATCCTCATGGAGTTGGAAGGCAAATTACAGAGGAGTTGCGCAGAATTAAAAGCACTGATACCGCATTATCTAGGGAGCTCACAGCCTACAATATTGTCCCACTGGGAGCACCATCAATAACCAATGCAATTGGAGTATTTCCAGAAATTAGAGGTGCAATGTCGGCAATTAGATATACTGAACAATTCCCTAGGCTGCCAGCTAAAGTTGAGATATCTGGACAACGGGATGCGGACATGTTTGATCTTCTGGAATTTGTGTTCGGTTTTCAGAAAGACAATGTAAGGAACCAGAGAGAGAATGTTGTCCTTACAATTGCAAATGCACAATCTCGCCTTGGTATACCTGCTCAGGCTGATCCATCTTGCGAGTATTTTGGCATAGAGTATGAAACTAGTGCAGTGGACTTGGAGTCATTTGGAACTTACAATGGGTTGATGACCTCGTCCACTACAACAGGAAAGAGCACTTTCGTCGAGCATCGAACATTTCTTCACTTGTATCGAAGTTTTCATCGTCTCTGGATCTTTCTAGCTTTGATGTTCCAGGGTTTGGCAATTATAGCCTTTAATGATGGGAAGATCAATTCGGATACAGTGAAGAGTGTACTCAGCATTGGGCCGGCATTTGCTATCATGAACTTCGTAGAAAGTAGTTTGGATGTGTTGCTCATGTTTGGGGCTTATACCACAGCCAGAGGCATGGCTATCTCAAGACTTGTAATTAGATTTTTCTGGTTTGGCTTGAGTTCTGTCGCTGTGACATATATTTATGTGAAGGTTCTGCAGGAAAGAAATGATAAATCAAATGATTCATTCTACTTTCGGATATACATTCTTGTACTGGGTGTTTATGCAGCTTTACGCCTAGTCCTTGCGCTATTACTCAAATTTCCGGCATGTCATAAGCTTTCTGAAATGTCAGATCAATCATTTTTCCAATTTTTCAAGTGGATATATGAGGAGCGTTATTTTGTTGGACGTGGTCTTTATGAGGGGATGAGCGATTATCTCAGGTCTGTGCTCTTTTGGGTGGTAATCTTCACATGCAAGTTCCTTTTCACGTACTTTCTCCAGATTAAGCCTCTTGTTGAACCAACGAGAATTATTGTGAAACTTCCAGCTGTGCAATATGCATGGCATGATTTGGTCTCAAAGAACAACAAAAATGTGTTAACTATAGCTAGCCTATGGGCTCCTGTTGTGGCTATCTATCTCATGGACATTCACATATGGTACACTCTTTTGTCGGCCATAATTGGCGGTGTAATGGGTGCAAGGTCTCGGTTAGGCGAGATACGCTCAATTGAAATGGTGCATAAACGTTTTGAGAGCTTTCCGGAAGCTTTTGTGAAGAATCTAGTTTCACAATCACAGAAACAAAGGTTTCCGTCTAACAGTGAACCATCTCAGGATTCTCAAGTCTTAAACAAGACAAATGCAACAATTTTTTCTCCATTTTGGAATGAGATAATAAAAAGCTTACGAGAGGAGGATTTTATCAGTAATAGGGAGAAGGATTTACTTTCTATTCCTAGCAACACTGGAAGTCTAAGATTAGTGCAGTGGCCTCTGTTTCTTCTAAGTAGTAAGATCTTGCTTGCAATTGATTTGGCCTTGGACTGCAAAGATACGCAGGCAGATCTTTGGAGCAGAGTATGCAGGGATGAGTACATGGCATATGCTGTTCAGGAATGCTACTACAGTATTGAAAAAATATTGTATTCTCTGGTTGAGGGTGAAGGGAGACTTTGGGTGGAGAGGATCTATCGAGAGATCAACAACAGTATTATGGAGGGTTCGCTTGTTGTAACTTTAAATCTTGCAAACCTTCCAGCAGTGCTACGAAAATTTACGGCTTTAACTGGGCTGCTGATACGTCCAGAAACCGATGTGCTTGCAAAAGGTGCCGCTAAAGCTGTATTTGATGTATATGAGGCCGTTACACATGACCTTCTGTCACCTGATTTGAGGGAGCAGCTCGACACATGGAGCCTTTTAGCAAAAGCAAGAAATGAAGGGCGCTTGTTTTCTAGGATAAAGTGGCCCAGTGACCCAGAAACTAAAGACTTGGTGAAGCGACTATACCTTCTTCTTACTGTAAAGGATTCTGCAGCAAATATTCCGAAGAATCTTGAAGCAAGAAGGAGATTAGAATTTTTCACAAATTCGTTATTTATGGACATCCCTTCAGCAAAGCCAGTTAGTGAAATGGTACCTTTCAGTGTATTCACCCCATACTACAGTGAGACTGTACTTTATAGTTCCTCCGAATTGCGGGTTGAAAATGAGGATGGAATTTCTGTTCTTTTTTATCTTCAGAAAATTTTTCCAGATGAGTGGGACAATTTCTTGGAACGAATTGGTCGGGACCAGTCCACTGGGGATGCTGAGCTTCAGGAAAATTCAAGTGATGCTTTGGAGCTTCGGTTTTGGGTATCTTATCGAGGACAGACTTTGGCCAGGACTGTGCGGGGTATGATGTATTATAGAAAGGCTTTAATGTTACAGAGTTATCTTGAAAGAAGGTCATTGGGAGTGGATGATTATTCTCAAGTTGATGCATTCTCAAGTCAAGGCTTTGAGTCATCACTTGAATCACGAGCCCAGGCAGATTTGAAGTTTACTTATGTTGTATCCTGCCAAATCTATGGGCAACAGAAGCAGAGAAGGGCACCTGAGGCTGCTGATATATCGCTCTTGTTGCAGAGGAATGAGGCACTGCGTGTTGCATATATACATGTGGAGGAAACTGCTACCGCTGAAGGACAGATCTTGAAAGAATTTTACTCAAAGCTTGTAAAAGCTGATATGCGTGGAACGGATCAGGAGATATATTCCATTAAACTTCCTGGTGATCCAAAGCTTGGTGAAGGGAAGCCTGAAAATCAAAACCATGCTATAGTCTTCACTCGCGGGGAAGCTGTTCAAACTATTGACATGAACCAGGACAATTACCTTGAGGAGGCAATGAAAATGAGAAATCTTCTCGAGGAGTTTCACAAAAATCACGGTCTTCGCCCCCCATCTATTCTTGGTGTGAGAGAGCATGTATTTACTGGAAGTGTCTCATCTTTAGCATGGTTCATGTCCAATCAAGAGACTAGCTTTGTAACTTTAGCTCAACGTGTTTTAGCATTCCCTCTCAAAGTTCGTATGCATTATGGGCATCCTGATGTGTTTGACCGCATCTTTCACATTACTCGAGGTGGAATTAGTAAAGCTTCACGTGTTATTAACATCAGTGAAGATATTTTTGCAGGGTTCAACTCCACATTAAGGCAGGGTAACATTACCCACCACGAATACATTCAGGTTGGGAAAGGAAGGGATGTTGGCCTGAACCAGATTGCATTGTTTGAAGGGAAAGTTGCAGGTGGAAATGGGGAGCAAGTCCTTAGTAGGGATGTCTACAGGCTTGGGCAACTTCTTGATTTTTTCAGAATGTTCTCTTTCTTCTACACAACAGTTGGTTACTATGTGTGTACAATGATGACCGTCCTCATTGTATACATCTTCCTGTATGGAAGGGCGTACCTGGCTTTCTCTGGACTTGATCGTGCAATTGCGAAGGAAGCAAAAATATCGGGTAACACAGCATTAGATGCTGTTCTTAATGCACAGTTTTTGGTGCAGATTGGAATTTTCACAGCAGTCCCAATGATAATGGGTTTTATACTTGAATTGGGATTACTAAAGGCGGTTTTCAGTTTTATCACTATGCAGCTGCAGTTGTGTTCTGTGTTCTTCACATTCTCTTTGGGAACTAGAACTCATTATTTTGGACGTACCATCCTCCATGGAGGTGCAAAATACCGAGCAACTGGTAGGGGGTTTGTTGTCCGACACATAAAGTTTGCTGATAATTATAGGCTCTACTCTAGAAGCCATTTCGTCAAAGCGCTTGAAGTGGCCCTTCTCCTCATAGTTTACATTGCATATGGGTACGCGGATGGTGGTGCTGTTTCTTATATTCTGCTAACTCTTAGCAGTTGGTTCCTCGTCATCTCCTGGCTGTTTGCTCCCTACATCTTTAATCCTTCCGGTTTTGAGTGGCAAAAGACAGTGGAAGATTTTGATGATTGGACAAGTTGGCTTCTTTACAAAGGTGGAGTAGGAGTTAAGGGAGAAAATAGCTGGGAATCTTGGTGGGATGAGGAGCAGATGCATATTCAAACATTGAGAGGTCGTATCTTGGAAACAATTTTGAGCTTGAGATTCTTCTTATTTCAATATGGCATTGTTTACAAACTCCATCTCACTGGGAAGGACACATCACTCGCGATATACGGCTTCTCTTGGGTTGTGTTGATAACTGTTGTCATGATATTCAAGGTGTTCACCTTGAGTCAGAAAAAGTCGGCCAAATTCCAGCTGTTCATGAGATTTACACAGGGTGTCACGTCCATGGGACTGGTTGCAGCTATTGTTCTACTTGTTATATTCACGAGTCTTTCAATAGCAGACCTGTTTGCAAGCATACTTGCAATCATTCCGACCGGATGGGCCATAATATGTCTAGCCATCACGTGGAAGAGCATTGTCAGGAGTCTTGGTTTATGGGACTCGGTGAGGGAGTTTGCGAGAATGTACGATGCTGGTATGGGTATGCTCATTTTTGCTCCTATAGCATTCTTGTCATGGTTCCCGTTCATCTCCACCTTCCAGTCTCGGCTTCTGTTTAACCAAGCATTTAGTCGGGGGTTGGAGATCTCTCTCATCCTTGCTGGAAACAAAGCTAACGTGGATGTCTGA

Protein Analysis

1766

Amino Acids

201.25

Weight (kDa)

8.34

Isoelectric Point (pI)

40.02

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CALS1 PF25968 706 - 883 1.1e-46 Callose synthase 1 domain
Glucan_synthase PF02364 890 - 1668 1.8e-230 1,3-beta-glucan synthase component
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 3911
Acc16I TGCGCA 1 cut(s) 587
Acc36I ACCTGC 2 cut(s) 901, 3911
Acc65I GGTACC 1 cut(s) 2761
AccB1I GGYRCC 3 cut(s) 2453, 2761, 3220
AccB7I CCANNNNNTGG 3 cut(s) 1099, 3413, 5076
AccBSI CCGCTC 1 cut(s) 28
AccI GTMKAC 3 cut(s) 889, 3957, 4056
AccII CGCG 3 cut(s) 3462, 4496, 4829
AccIII TCCGGA 1 cut(s) 1885
AclI AACGTT 1 cut(s) 1870
AclWI GGATC 6 cut(s) 542, 899, 1079, 2318, 3378, 3398
AcoI YGGCCR 4 cut(s) 73, 1797, 3006, 4908
AcuI CTGAAG 5 cut(s) 257, 2721, 2849, 2927, 3330
AcvI CACGTG 2 cut(s) 3776, 5076
AdeI CACNNNGTG 2 cut(s) 3272, 4943
AfeI AGCGCT 3 cut(s) 112, 383, 4449
AfiI CCNNNNNNNGG 9 cut(s) 88, 421, 1099, 2823, 3413, 3511, 3825, 3949, 5076
AflIII ACRYGT 4 cut(s) 783, 3286, 3673, 3775
AhdI GACNNNNNGTC 2 cut(s) 958, 2503
AhlI ACTAGT 2 cut(s) 251, 941
AjiI CACGTC 2 cut(s) 1529, 4950
AjnI CCWGG 8 cut(s) 402, 1092, 3008, 3153, 3397, 3492, 4083, 4556
AloI GAACNNNNNNTCC 6 cut(s) 252, 284, 791, 823, 2835, 2867
Alw21I GWGCWC 4 cut(s) 627, 658, 1016, 1572
AlwI GGATC 6 cut(s) 542, 899, 1079, 2318, 3378, 3398
Ama87I CYCGRG 2 cut(s) 3536, 3750
Aor13HI TCCGGA 1 cut(s) 1885
Aor51HI AGCGCT 3 cut(s) 112, 383, 4449
Asp700I GAANNNNTTC 2 cut(s) 3471, 3855
Asp718I GGTACC 1 cut(s) 2761
AspA2I CCTAGG 1 cut(s) 737
AspLEI GCGC 7 cut(s) 113, 235, 384, 588, 1426, 2571, 4450
AspS9I GGNCC 5 cut(s) 1166, 2592, 2917, 4459, 5052
AsuNHI GCTAGC 1 cut(s) 1730
AvaI CYCGRG 2 cut(s) 3536, 3750
AvaII GGWCC 1 cut(s) 2917
AvrII CCTAGG 1 cut(s) 737
AxyI CCTNAGG 2 cut(s) 503, 3225
BaeGI GKGCMC 1 cut(s) 3223
BalI TGGCCA 1 cut(s) 3008
BanI GGYRCC 3 cut(s) 2453, 2761, 3220
BanII GRGCYC 4 cut(s) 94, 627, 1744, 3154
BarI GAAGNNNNNNTAC 4 cut(s) 556, 588, 2615, 2647
BauI CACGAG 2 cut(s) 3147, 4993
BbrPI CACGTG 2 cut(s) 3776, 5076
BbsI GAAGAC 2 cut(s) 3445, 3554
Bbv12I GWGCWC 4 cut(s) 627, 658, 1016, 1572
BceAI ACGGC 3 cut(s) 2418, 2471, 4852
BcgI CGANNNNNNTGC 6 cut(s) 1003, 1037, 2426, 2460, 4113, 4147
BciT130I CCWGG 8 cut(s) 404, 1094, 3010, 3155, 3399, 3494, 4085, 4558
BciVI GTATCC 2 cut(s) 1132, 3193
BcuI ACTAGT 2 cut(s) 251, 941
BfmI CTRYAG 9 cut(s) 1331, 1725, 2248, 2658, 2788, 3447, 3958, 4274, 5172
BfoI RGCGCY 4 cut(s) 114, 385, 2572, 4451
BfuAI ACCTGC 2 cut(s) 901, 3911
BfuI GTATCC 2 cut(s) 1132, 3193
BglII AGATCT 4 cut(s) 2139, 2188, 3318, 5256
BlnI CCTAGG 1 cut(s) 737
BlpI GCTNAGC 2 cut(s) 533, 2937
Bme1390I CCNGG 8 cut(s) 404, 1094, 3010, 3155, 3399, 3494, 4085, 4558
Bme18I GGWCC 1 cut(s) 2917
BmeRI GACNNNNNGTC 2 cut(s) 958, 2503
BmeT110I CYCGRG 2 cut(s) 3536, 3750
BmgBI CACGTC 2 cut(s) 1529, 4950
BmgT120I GGNCC 5 cut(s) 1166, 2592, 2917, 4459, 5052
BmrFI CCNGG 8 cut(s) 404, 1094, 3010, 3155, 3399, 3494, 4085, 4558
BmrI ACTGGG 6 cut(s) 659, 1400, 2421, 2589, 2937, 4818
BmtI GCTAGC 1 cut(s) 1734
BmuI ACTGGG 6 cut(s) 659, 1400, 2421, 2589, 2937, 4818
BpiI GAAGAC 2 cut(s) 3445, 3554
BplI GAGNNNNNCTC 6 cut(s) 30, 62, 45, 77, 1832, 1864
BpmI CTGGAG 3 cut(s) 184, 425, 1604
Bpu10I CCTNAGC 1 cut(s) 897
Bpu1102I GCTNAGC 2 cut(s) 533, 2937
BpuEI CTTGAG 9 cut(s) 32, 1243, 1312, 1950, 3084, 3100, 3527, 4780, 4912
Bsa29I ATCGAT 1 cut(s) 147
BsaAI YACGTR 3 cut(s) 1611, 3776, 5076
BsaBI GATNNNNATC 2 cut(s) 345, 546
BsaI GGTCTC 3 cut(s) 142, 1702, 1833
BsaJI CCNNGG 9 cut(s) 76, 183, 737, 883, 1093, 2163, 3153, 4345, 4953
BsaWI WCCGGW 3 cut(s) 1885, 4589, 5045
BsaXI ACNNNNNCTCC 6 cut(s) 2960, 2990, 4650, 4680, 5086, 5116
Bsc4I CCNNNNNNNGG 9 cut(s) 88, 421, 1099, 2823, 3413, 3511, 3825, 3949, 5076
Bse118I RCCGGY 1 cut(s) 1168
Bse21I CCTNAGG 2 cut(s) 503, 3225
Bse3DI GCAATG 3 cut(s) 711, 3522, 4479
Bse8I GATNNNNATC 2 cut(s) 345, 546
BseAI TCCGGA 1 cut(s) 1885
BseBI CCWGG 8 cut(s) 404, 1094, 3010, 3155, 3399, 3494, 4085, 4558
BseCI ATCGAT 1 cut(s) 147
BseDI CCNNGG 9 cut(s) 76, 183, 737, 883, 1093, 2163, 3153, 4345, 4953
BseJI GATNNNNATC 2 cut(s) 345, 546
BseLI CCNNNNNNNGG 9 cut(s) 88, 421, 1099, 2823, 3413, 3511, 3825, 3949, 5076
BseMI GCAATG 3 cut(s) 711, 3522, 4479
BseMII CTCAG 9 cut(s) 76, 494, 547, 911, 1171, 1573, 1970, 2928, 3216
BseSI GKGCMC 1 cut(s) 3223
BseYI CCCAGC 2 cut(s) 127, 4683
BsgI GTGCAG 3 cut(s) 966, 2129, 4199
Bsh1236I CGCG 3 cut(s) 3462, 4496, 4829
Bsh1285I CGRYCG 1 cut(s) 5046
BshNI GGYRCC 3 cut(s) 2453, 2761, 3220
BshVI ATCGAT 1 cut(s) 147
BsiEI CGRYCG 1 cut(s) 5046
BsiHKAI GWGCWC 4 cut(s) 627, 658, 1016, 1572
BsiHKCI CYCGRG 2 cut(s) 3536, 3750
BsiSI CCGG 6 cut(s) 72, 1169, 1442, 1886, 4590, 5046
BslFI GGGAC 6 cut(s) 629, 2903, 2930, 4187, 4971, 5123
BslI CCNNNNNNNGG 9 cut(s) 88, 421, 1099, 2823, 3413, 3511, 3825, 3949, 5076
BsmBI CGTCTC 2 cut(s) 202, 1070
BsmFI GGGAC 6 cut(s) 629, 2903, 2930, 4187, 4971, 5123
BsmI GAATGC 5 cut(s) 438, 2246, 3110, 3683, 5177
Bso31I GGTCTC 3 cut(s) 142, 1702, 1833
BsoBI CYCGRG 2 cut(s) 3536, 3750
Bsp1286I GDGCHC 8 cut(s) 94, 627, 658, 1016, 1572, 1744, 3154, 3223
Bsp13I TCCGGA 1 cut(s) 1885
Bsp1407I TGTACA 1 cut(s) 4031
Bsp1720I GCTNAGC 2 cut(s) 533, 2937
Bsp19I CCATGG 2 cut(s) 4345, 4953
Bsp68I TCGCGA 1 cut(s) 4829
BspCNI CTCAG 9 cut(s) 75, 495, 546, 910, 1170, 1572, 1969, 2929, 3217
BspDI ATCGAT 1 cut(s) 147
BspEI TCCGGA 1 cut(s) 1885
BspFNI CGCG 3 cut(s) 3462, 4496, 4829
BspHI TCATGA 3 cut(s) 1182, 4869, 4926
BspMAI CTGCAG 3 cut(s) 1335, 2662, 4278
BspMI ACCTGC 2 cut(s) 901, 3911
BspOI GCTAGC 1 cut(s) 1734
BspPI GGATC 6 cut(s) 542, 899, 1079, 2318, 3378, 3398
BspQI GCTCTTC 1 cut(s) 5075
BspT107I GGYRCC 3 cut(s) 2453, 2761, 3220
BspTNI GGTCTC 3 cut(s) 142, 1702, 1833
BsrBI CCGCTC 1 cut(s) 28
BsrDI GCAATG 3 cut(s) 711, 3522, 4479
BsrFI RCCGGY 1 cut(s) 1168
BsrGI TGTACA 1 cut(s) 4031
BssAI RCCGGY 1 cut(s) 1168
BssECI CCNNGG 9 cut(s) 76, 183, 737, 883, 1093, 2163, 3153, 4345, 4953
BssNAI GTATAC 2 cut(s) 890, 4057
BssSI CACGAG 2 cut(s) 3147, 4993
BssT1I CCWWGG 6 cut(s) 76, 737, 883, 2163, 4345, 4953
Bst1107I GTATAC 2 cut(s) 890, 4057
Bst2BI CACGAG 2 cut(s) 3147, 4993
Bst2UI CCWGG 8 cut(s) 404, 1094, 3010, 3155, 3399, 3494, 4085, 4558
Bst6I CTCTTC 3 cut(s) 256, 1142, 5075
BstAPI GCANNNNNTGC 3 cut(s) 2205, 2453, 4151
BstAUI TGTACA 1 cut(s) 4031
BstBAI YACGTR 3 cut(s) 1611, 3776, 5076
BstDSI CCRYGG 2 cut(s) 4345, 4953
BstENI CCTNNNNNAGG 1 cut(s) 3509
BstFNI CGCG 3 cut(s) 3462, 4496, 4829
BstH2I RGCGCY 4 cut(s) 114, 385, 2572, 4451
BstHHI GCGC 7 cut(s) 113, 235, 384, 588, 1426, 2571, 4450
BstMCI CGRYCG 1 cut(s) 5046
BstNI CCWGG 8 cut(s) 404, 1094, 3010, 3155, 3399, 3494, 4085, 4558
BstNSI RCATGY 5 cut(s) 787, 1449, 1596, 3290, 3599
BstSCI CCNGG 8 cut(s) 402, 1092, 3008, 3153, 3397, 3492, 4083, 4556
BstSFI CTRYAG 9 cut(s) 1331, 1725, 2248, 2658, 2788, 3447, 3958, 4274, 5172
BstSLI GKGCMC 1 cut(s) 3223
BstUI CGCG 3 cut(s) 3462, 4496, 4829
BstV2I GAAGAC 2 cut(s) 3445, 3554
BstX2I RGATCY 7 cut(s) 547, 1071, 2139, 2188, 2310, 3318, 5256
BstXI CCANNNNNNTGG 6 cut(s) 1249, 2886, 2927, 3197, 4808, 4960
BstYI RGATCY 7 cut(s) 547, 1071, 2139, 2188, 2310, 3318, 5256
BstZ17I GTATAC 2 cut(s) 890, 4057
Bsu15I ATCGAT 1 cut(s) 147
Bsu36I CCTNAGG 2 cut(s) 503, 3225
BsuI GTATCC 2 cut(s) 1132, 3193
BsuTUI ATCGAT 1 cut(s) 147
BtgI CCRYGG 2 cut(s) 4345, 4953
BtrI CACGTC 2 cut(s) 1529, 4950
BtsI GCAGTG 4 cut(s) 954, 2117, 2391, 3266
BtuMI TCGCGA 1 cut(s) 4829
BveI ACCTGC 2 cut(s) 901, 3911
CciI TCATGA 3 cut(s) 1182, 4869, 4926
CfoI GCGC 7 cut(s) 113, 235, 384, 588, 1426, 2571, 4450
Cfr10I RCCGGY 1 cut(s) 1168
Cfr13I GGNCC 5 cut(s) 1166, 2592, 2917, 4459, 5052
ClaI ATCGAT 1 cut(s) 147
DraI TTTAAA 1 cut(s) 2364
DraIII CACNNNGTG 2 cut(s) 3272, 4943
DriI GACNNNNNGTC 2 cut(s) 958, 2503
EaeI YGGCCR 4 cut(s) 73, 1797, 3006, 4908
Eam1104I CTCTTC 3 cut(s) 256, 1142, 5075
Eam1105I GACNNNNNGTC 2 cut(s) 958, 2503
EarI CTCTTC 3 cut(s) 256, 1142, 5075
Ecl136II GAGCTC 1 cut(s) 625
Eco130I CCWWGG 6 cut(s) 76, 737, 883, 2163, 4345, 4953
Eco24I GRGCYC 4 cut(s) 94, 627, 1744, 3154
Eco31I GGTCTC 3 cut(s) 142, 1702, 1833
Eco32I GATATC 2 cut(s) 412, 762
Eco47I GGWCC 1 cut(s) 2917
Eco47III AGCGCT 3 cut(s) 112, 383, 4449
Eco53kI GAGCTC 1 cut(s) 625
Eco57I CTGAAG 5 cut(s) 257, 2721, 2849, 2927, 3330
Eco72I CACGTG 2 cut(s) 3776, 5076
Eco81I CCTNAGG 2 cut(s) 503, 3225
Eco88I CYCGRG 2 cut(s) 3536, 3750
EcoICRI GAGCTC 1 cut(s) 625
EcoNI CCTNNNNNAGG 1 cut(s) 3509
EcoRI GAATTC 1 cut(s) 204
EcoRII CCWGG 8 cut(s) 402, 1092, 3008, 3153, 3397, 3492, 4083, 4556
EcoRV GATATC 2 cut(s) 412, 762
EcoT14I CCWWGG 6 cut(s) 76, 737, 883, 2163, 4345, 4953
EcoT22I ATGCAT 4 cut(s) 1684, 3112, 3708, 4716
EcoT38I GRGCYC 4 cut(s) 94, 627, 1744, 3154
ErhI CCWWGG 6 cut(s) 76, 737, 883, 2163, 4345, 4953
Esp3I CGTCTC 2 cut(s) 202, 1070
FalI AAGNNNNNCTT 6 cut(s) 2280, 2312, 2947, 2979, 4446, 4478
FaqI GGGAC 6 cut(s) 629, 2903, 2930, 4187, 4971, 5123
FauI CCCGC 3 cut(s) 2817, 3012, 3455
FauNDI CATATG 3 cut(s) 1778, 2227, 4486
FblI GTMKAC 3 cut(s) 889, 3957, 4056
FriOI GRGCYC 4 cut(s) 94, 627, 1744, 3154
FspI TGCGCA 1 cut(s) 587
GlaI GCGC 7 cut(s) 112, 234, 383, 587, 1425, 2570, 4449
GsaI CCCAGC 2 cut(s) 131, 4687
GsuI CTGGAG 3 cut(s) 184, 425, 1604
HaeII RGCGCY 4 cut(s) 114, 385, 2572, 4451
HapII CCGG 6 cut(s) 72, 1169, 1442, 1886, 4590, 5046
HhaI GCGC 7 cut(s) 113, 235, 384, 588, 1426, 2571, 4450
Hin6I GCGC 7 cut(s) 111, 233, 382, 586, 1424, 2569, 4448
HinP1I GCGC 7 cut(s) 111, 233, 382, 586, 1424, 2569, 4448
HincII GTYRAC 1 cut(s) 1722
HindII GTYRAC 1 cut(s) 1722
HindIII AAGCTT 6 cut(s) 1454, 1890, 2026, 3341, 3410, 3768
HpaI GTTAAC 1 cut(s) 1722
HpaII CCGG 6 cut(s) 72, 1169, 1442, 1886, 4590, 5046
Hpy99I CGWCG 4 cut(s) 124, 127, 396, 1025
HspAI GCGC 7 cut(s) 111, 233, 382, 586, 1424, 2569, 4448
Kpn2I TCCGGA 1 cut(s) 1885
KpnI GGTACC 1 cut(s) 2765
KroI GCCGGC 1 cut(s) 1168
KroNI GCCGGC 1 cut(s) 1170
KspAI GTTAAC 1 cut(s) 1722
LguI GCTCTTC 1 cut(s) 5075
MbiI CCGCTC 1 cut(s) 28
MfeI CAATTG 7 cut(s) 19, 492, 675, 861, 1851, 2151, 4110
MflI RGATCY 7 cut(s) 547, 1071, 2139, 2188, 2310, 3318, 5256
MhlI GDGCHC 8 cut(s) 94, 627, 658, 1016, 1572, 1744, 3154, 3223
MlsI TGGCCA 1 cut(s) 3008
MluNI TGGCCA 1 cut(s) 3008
MlyI GAGTC 6 cut(s) 968, 3140, 4903, 5005, 5104, 5105
MmeI TCCRAC 5 cut(s) 541, 1504, 4414, 5066, 5232
Mox20I TGGCCA 1 cut(s) 3008
Mph1103I ATGCAT 4 cut(s) 1684, 3112, 3708, 4716
MroI TCCGGA 1 cut(s) 1885
MroNI GCCGGC 1 cut(s) 1168
MroXI GAANNNNTTC 2 cut(s) 3471, 3855
MscI TGGCCA 1 cut(s) 3008
MslI CAYNNNNRTG 3 cut(s) 3720, 4350, 4952
Msp20I TGGCCA 1 cut(s) 3008
MspA1I CMGCKG 4 cut(s) 1670, 3308, 4273, 4921
MspI CCGG 6 cut(s) 72, 1169, 1442, 1886, 4590, 5046
MspR9I CCNGG 8 cut(s) 404, 1094, 3010, 3155, 3399, 3494, 4085, 4558
MunI CAATTG 7 cut(s) 19, 492, 675, 861, 1851, 2151, 4110
Mva1269I GAATGC 5 cut(s) 438, 2246, 3110, 3683, 5177
MvaI CCWGG 8 cut(s) 404, 1094, 3010, 3155, 3399, 3494, 4085, 4558
MvnI CGCG 3 cut(s) 3462, 4496, 4829
NaeI GCCGGC 1 cut(s) 1170
NcoI CCATGG 2 cut(s) 4345, 4953
NdeI CATATG 3 cut(s) 1778, 2227, 4486
NgoMIV GCCGGC 1 cut(s) 1168
NheI GCTAGC 1 cut(s) 1730
NmeAIII GCCGAG 2 cut(s) 208, 5197
NmuCI GTSAC 4 cut(s) 1306, 2505, 2597, 4945
NruI TCGCGA 1 cut(s) 4829
NsbI TGCGCA 1 cut(s) 587
NsiI ATGCAT 4 cut(s) 1684, 3112, 3708, 4716
NspI RCATGY 5 cut(s) 787, 1449, 1596, 3290, 3599
PaeR7I CTCGAG 2 cut(s) 3536, 3750
PagI TCATGA 3 cut(s) 1182, 4869, 4926
PaqCI CACCTGC 1 cut(s) 3911
PciI ACATGT 2 cut(s) 783, 3286
PciSI GCTCTTC 1 cut(s) 5075
PctI GAATGC 5 cut(s) 438, 2246, 3110, 3683, 5177
PdiI GCCGGC 1 cut(s) 1170
PdmI GAANNNNTTC 2 cut(s) 3471, 3855
PflFI GACNNNGTC 2 cut(s) 991, 1530
PflMI CCANNNNNTGG 3 cut(s) 1099, 3413, 5076
PleI GAGTC 6 cut(s) 967, 3139, 4902, 5004, 5103, 5105
PmaCI CACGTG 2 cut(s) 3776, 5076
PmlI CACGTG 2 cut(s) 3776, 5076
PpsI GAGTC 6 cut(s) 967, 3139, 4902, 5004, 5103, 5105
Ppu21I YACGTR 3 cut(s) 1611, 3776, 5076
PscI ACATGT 2 cut(s) 783, 3286
Psp124BI GAGCTC 1 cut(s) 627
Psp1406I AACGTT 1 cut(s) 1870
Psp6I CCWGG 8 cut(s) 402, 1092, 3008, 3153, 3397, 3492, 4083, 4556
PspCI CACGTG 2 cut(s) 3776, 5076
PspFI CCCAGC 2 cut(s) 127, 4683
PspGI CCWGG 8 cut(s) 402, 1092, 3008, 3153, 3397, 3492, 4083, 4556
PspPI GGNCC 5 cut(s) 1166, 2592, 2917, 4459, 5052
PspXI VCTCGAGB 1 cut(s) 3750
PstI CTGCAG 3 cut(s) 1335, 2662, 4278
PsuI RGATCY 7 cut(s) 547, 1071, 2139, 2188, 2310, 3318, 5256
PsyI GACNNNGTC 2 cut(s) 991, 1530
PvuII CAGCTG 3 cut(s) 1670, 4273, 4921
RruI TCGCGA 1 cut(s) 4829
RseI CAYNNNNRTG 3 cut(s) 3720, 4350, 4952
SacI GAGCTC 1 cut(s) 627
SapI GCTCTTC 1 cut(s) 5075
Sau96I GGNCC 5 cut(s) 1166, 2592, 2917, 4459, 5052
SchI GAGTC 6 cut(s) 968, 3140, 4903, 5005, 5104, 5105
ScrFI CCNGG 8 cut(s) 404, 1094, 3010, 3155, 3399, 3494, 4085, 4558
SduI GDGCHC 8 cut(s) 94, 627, 658, 1016, 1572, 1744, 3154, 3223
SfcI CTRYAG 9 cut(s) 1331, 1725, 2248, 2658, 2788, 3447, 3958, 4274, 5172
Sfr274I CTCGAG 2 cut(s) 3536, 3750
SinI GGWCC 1 cut(s) 2917
SlaI CTCGAG 2 cut(s) 3536, 3750
SmiMI CAYNNNNRTG 3 cut(s) 3720, 4350, 4952
SpeI ACTAGT 2 cut(s) 251, 941
SspI AATATT 3 cut(s) 640, 2265, 2668
SstI GAGCTC 1 cut(s) 627
StyD4I CCNGG 8 cut(s) 402, 1092, 3008, 3153, 3397, 3492, 4083, 4556
StyI CCWWGG 6 cut(s) 76, 737, 883, 2163, 4345, 4953
TatI WGTACW 5 cut(s) 1153, 1387, 2217, 2800, 4031
TauI GCSGC 2 cut(s) 31, 2459
TseFI GTSAC 4 cut(s) 1306, 2505, 2597, 4945
Tsp45I GTSAC 4 cut(s) 1306, 2505, 2597, 4945
TspGWI ACGGA 3 cut(s) 108, 1926, 3383
Tth111I GACNNNGTC 2 cut(s) 991, 1530
Van91I CCANNNNNTGG 3 cut(s) 1099, 3413, 5076
VpaK11BI GGWCC 1 cut(s) 2917
XagI CCTNNNNNAGG 1 cut(s) 3509
XbaI TCTAGA 1 cut(s) 4427
XceI RCATGY 5 cut(s) 787, 1449, 1596, 3290, 3599
XhoI CTCGAG 2 cut(s) 3536, 3750
XmaJI CCTAGG 1 cut(s) 737
XmiI GTMKAC 3 cut(s) 889, 3957, 4056
XmnI GAANNNNTTC 2 cut(s) 3471, 3855
Zsp2I ATGCAT 4 cut(s) 1684, 3112, 3708, 4716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.