Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr09

Orthogroup ID

OG0001554

Physical Location & Seq

Genomic Coordinates Forward (+)

14430200 .. 14433418

Gene Structure 3219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD09G1171000.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3219 bp

ATGTCTTCTTCTCTTGTTCCGATGAAACACGACAAGGAGAAGGAGAAGGTGAAGGTCCCAACAATGCTAACACTGCCAAGCTTTCGTCTTCTCTGCTATTTGGGTCAATTGGTTTTCGTCCTTCTTCTTCTTCCTTGCTCTGCCTCTGCTGCCTGCGACGGGCTCGATCGCGACGCTCTCTTGTCCTTGGCTTTCAAGGCACCGTTGAATTGGTCTGCTTCCACTGACTGCTGCCTCTGGGATGGAATCACCTGCGACCCGGATGAGCACAGCCGCGTTGTCGCCATTTCGCTTCCAAGGAGAGGCTTATCCGGCGTCGTATCTCCGGCCATCACCAACCTCACCCGGCTCACCCACCTCGACCTTTCCCACAATTCCCTCTTGGGTTCTCTCCCAGACGACTTGCTTTCTGCCCTCCCGAGTCTTGAGTTCGTCGACTTGAGCTTCAATCGTCTCATCGGCCGCTTCCCACAATCCTCCAATCAAAGCAGCCACCTTCAGATTATAAACTTGTCCAGCAACTTCCTCAATGGAACAATCCCGTCTTCGATTCTCGTCCCATCAGTGTCCGTTTTCAATGTCAGCAACAACAGCTTTTCCGGATCGATACCGGTCAGCAATGGCGGGAATCACACTTCCCTTACCTTCTTGGACTTGTCCTTCAATGAATTCACATACACAATTCCCCTAGGAATCGGATTGTGTTCGAAGCTTCAAAGTTTTCGGGCAGGCTTCAATGACCTCAATGGTTCTCTCCCTGATGAAATATTTATGCTTGCTGATCTCCAACAGCTCTCTCTGCCTTTCAATAGTCTCTCTGGACCCCTCATTGACGGCATCATGAACCTCACCAATCTCAGGATCCTTGAGCTTTATTCAAACCAGTTCTTGGGAAGCATCCCGGGCAGTATTGGTAACCTTTTCAGGTTGGAAAAGCTGCTCCTCTACGTCAACAACTTCACAGGTGCCTTGCCTCCGTCTCTTGCCAACTGCACAAATCTATCAACCTTGAATTTGCGGCTCAACAACTTGACTGGAGAGCTCTCTGCCTTCAATTTTTTGACTCTCCAGCGCCTCACCACTCTGGACCTTAGCAACAACAACTTCAGTGGTCAGTTACCTCAAAGCCTCTACTCATGCAAGTCCTTAACAGCTATTAGATTTGCCAGCAATCAGCTCACAGGCGAGATATCACCTGAAATAGTCGCATTAGAATCGTTGTCTTTCCTGTCTATCTCTACTAACAACCTGACAAATGTCGCCGGGGCTTTTAGGATTCTGAAGGGTTGCAAGAATCTGACCACTCTGGTCTTGTCCAAGAATTTTTTGAATGAGCCTTTGCCAGATGATAAAAGCCTTGGAGACCCTGTTGGCTTCCAAAGTCTTCAGGTTTTTGCTATTGGGGGTTGCCAATTCACAGGTCAAGTACCCAGCTGGCTAGCCAAGGTTATGACTCTTGAAGTCTTGGACTTGTCGTTTAATTTTATAACCGGTTCTATCCCCGGTTGGATGGGTAGTTTGCCAAACCTTTTCTACGTAGATTTGTCTAATAACCTTCTTGGAGGAGGGTTTCCTATTGAGTTCTGTGGGATGCCAGTTTTGACAACCAAAGAGGCCGGTGATATGGTGGACAGAAGTTATCTAGAGTTGCCAGTCTTTGTGATGCCCAACAGCGCTACTAAACAGCAGTACAATCAGCTGTCCAATCTCCCCCCGGCTATATATTTCGGTAACAACAGCCTTACTGGCAGTATCCCTTCTGAGATTGGTCGATTGAAGTATATTCATGTGTTGGACCTTAGTTATAACAACTTCACTGGAAGCATTCCGGAACAGATTTCTAACCTCACCAACTTGGAGAAATTGGACCTCTCCTATAACCATCTATCCGGTGGAATCCCTGCTTCTCTCAAAGGTCTGCATTTCTTGTCTTCCTTCAGTGTGGCATACAATGATCTTCAGGGACTTGTACCATCTGGAGGTCAGTTTGATACTTTTACCCACTCCAGCTTTGAAGGGAACGCTGGACTATGCGGCCCTCCAACTGTGCACAGGACTTGCCCTCAACCTCAACCATTATCACCTGCCGGTCGAAGATCTAACAGAAACCTTCTTATTGGACTCACCTCCGGGATCTGTTTTGGCATTGTATTTATTGTTGTCATGCTAGTAGTGTGGATGTTGTCTAAGAGAAGAATCATCCCTGGAGGAGAGATAGATTTCGAGACCATGTCTAGCCATTCTACTGCTGTTGCTCCTGAGCTTGACAAGGATACCAGCTTAGTCATAGTGTTCCCAGCCAACACCAATGAAATCAAGGATCTTAGTATAACTGAAATCTTGAGGGCAACTGACAATTTCGATCAAGCAAACATCATCGGCTGTGGAGGTTTTGGTCTGGTTTACAGAGCAACTTTAGCGAATGGGACCAGGCTAGCTGTTAAGAAACTATCAGGAGACTTGGGTCTGATGGAAAGGGAATTCAAAGCAGAAGTTGAGGCGCTGTCCACTGCCCAACATGAGAATCTGGTTTCCCTGCAAGGTTATTGCGTGCATGATGGCGTTCGCCTGTTAATGTATTCGTATATGGAGAATGGAAGTCTGGATTACTGGTTACATGAGAAAGCAGATGGTCCTTCCCAATTAGATTGGCCAATTCGACTGAATATTTTGCGAGGAGCAGGCTGTGGGTTGGCTTACATGCACCAAATATGTGAGCCGCATATTGTACATCGTGATATCAAGTCGAGCAACATCCTCCTTGACGATAAATTTCAAGCACATGTTGCTGATTTTGGATTGTCCCGGTTGATTCTTCCATACCAGACTCATGTTACAACTGAGCTTGTTGGTACCCTTGGTTACATTCCTCCAGAGTATGGACAAGCATGGGTGGCCACTTTGAGAGGAGACATATACAGTTTTGGGGTTGTCATGCTTGAGCTGCTAACCGGAATAAGGCCTTTCGAGGTAAGCAAGCCAAGGGCATCGAGAGAGTTGGTTGGCTGGGTGCAACAAATGAGGAGAGAGGGCAAACCAGAGGAAGTTTTCGATCCTCTCCTGAGAGGGAAGGGCTTTGAAGATGAGATGCTTCAGGTTCTTGATGTGGCTTACTTATGTGTCAACCAGAACCCTCTTAAGAGACCAACGATCAAGGAAGTTGTCGATTGGCTGAAAGATGTAGGGACATCCCAGCAACACCAAGATAAAGACGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0001653 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006885 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0032502 GO:0032989 GO:0036211 GO:0038023 GO:0040007 GO:0042592 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045851 GO:0048589 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051716 GO:0055067 GO:0055080 GO:0060089 GO:0060560 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071944 GO:0098771 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

1073

Amino Acids

117.41

Weight (kDa)

5.43

Isoelectric Point (pI)

36.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_8	PF13855	103 - 152	1.3e-06	Leucine rich repeat
LRR_14	PF23598	303 - 518	3.9e-10	Leucine-rich repeat region
LRR_8	PF13855	467 - 520	1.5e-06	Leucine rich repeat
LRR_8	PF13855	596 - 653	6.2e-07	Leucine rich repeat
Pkinase	PF00069	789 - 1055	3.8e-37	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	791 - 1056	5.1e-37	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0001554)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17250 AT1G72300
fragaria_vesca	FvH4_6g35570 FvH4_6g35570 FvH4_6g35570 FvH4_6g36780 FvH4_6g36780 FvH4_6g36790 FvH4_6g36810
malus_domestica	MD02G1111300.v1.1 MD09G1166700.v1.1 MD09G1166900.v1.1 MD09G1171000.v1.1 MD17G1155900.v1.1 MD17G1156200.v1.1
prunus_persica	Prupe.3G024400_v2.0.a1 Prupe.3G024600_v2.0.a1 Prupe.3G024700_v2.0.a1 Prupe.3G029500_v2.0.a1
pyrus_communis	pycom09g08450 pycom17g14870 pycom17g14920
rosa_chinensis	RchiOBHm_Chr2g0147291 RchiOBHm_Chr2g0149181 RchiOBHm_Chr2g0149201
rosa_laevigata	RLG00000020249 RLG00000020378 RLG00000020379 RLG00000020380 RLG00000020381 RLG00000020382
rosa_multiflora	Rmu_co8376871.1_g000001 Rmu_sc0001615.1_g000001 Rmu_sc0001615.1_g000002 Rmu_sc0001880.1_g000001 Rmu_sc0008040.1_g000001
rosa_roxburghii	Rroxscaffold_2G00098330 Rroxscaffold_2G00098340 Rroxscaffold_2G00099610
rosa_rugosa	Rorug02G0399000 Rorug02G0409500 Rorug02G0409600 Rorug02G0409700
rosa_samantha	Rh2AG456100 Rh2BG468800 Rh2CG443700 Rh2DG478100
rosa_wichuraiana	Rw2G037320 Rw2G038220 Rw2G038230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	506, 1487, 1806
AarI	CACCTGC	2 cut(s)	260, 2092
Acc36I	ACCTGC	2 cut(s)	260, 2092
Acc65I	GGTACC	1 cut(s)	2852
AccB1I	GGYRCC	3 cut(s)	199, 965, 2852
AccB7I	CCANNNNNTGG	2 cut(s)	889, 2879
AccI	GTMKAC	1 cut(s)	435
AccII	CGCG	2 cut(s)	171, 276
AccIII	TCCGGA	2 cut(s)	599, 1828
AciI	CCGC	6 cut(s)	274, 463, 624, 1018, 2034, 2720
AclWI	GGATC	6 cut(s)	610, 856, 869, 2141, 2328, 3047
AcoI	YGGCCR	4 cut(s)	327, 460, 2651, 2895
AcsI	RAATTY	5 cut(s)	668, 1012, 1321, 2480, 2771
AcuI	CTGAAG	7 cut(s)	482, 1090, 1301, 1370, 1921, 1943, 3077
AcyI	GRCGYC	1 cut(s)	315
AfaI	GTAC	5 cut(s)	1428, 1691, 1971, 2730, 2854
AfeI	AGCGCT	1 cut(s)	1675
AfiI	CCNNNNNNNGG	7 cut(s)	159, 302, 858, 889, 1979, 2879, 2958
AflII	CTTAAG	1 cut(s)	3137
AflIII	ACRYGT	1 cut(s)	2782
AgeI	ACCGGT	2 cut(s)	610, 1490
AjnI	CCWGG	2 cut(s)	2203, 2429
Alw21I	GWGCWC	3 cut(s)	270, 1044, 2052
Alw26I	GTCTC	8 cut(s)	458, 818, 984, 1356, 2219, 2451, 2904, 3136
Alw44I	GTGCAC	1 cut(s)	2048
AlwI	GGATC	6 cut(s)	610, 856, 869, 2141, 2328, 3047
Ama87I	CYCGRG	2 cut(s)	418, 901
Aor13HI	TCCGGA	2 cut(s)	599, 1828
Aor51HI	AGCGCT	1 cut(s)	1675
AoxI	GGCC	7 cut(s)	327, 460, 1614, 2035, 2651, 2895, 2960
ApaLI	GTGCAC	1 cut(s)	2048
ApeKI	GCWGC	5 cut(s)	149, 231, 489, 937, 2944
ApoI	RAATTY	5 cut(s)	668, 1012, 1321, 2480, 2771
AsiGI	ACCGGT	2 cut(s)	610, 1490
Asp718I	GGTACC	1 cut(s)	2852
AspA2I	CCTAGG	1 cut(s)	688
AspLEI	GCGC	3 cut(s)	1074, 1676, 2503
AspS9I	GGNCC	8 cut(s)	55, 821, 1087, 1795, 1867, 2036, 2427, 2633
AsuC2I	CCSGG	9 cut(s)	260, 346, 902, 903, 1264, 1503, 1715, 2131, 2806
AsuII	TTCGAA	1 cut(s)	707
AsuNHI	GCTAGC	2 cut(s)	1438, 2434
AvaI	CYCGRG	2 cut(s)	418, 901
AvaII	GGWCC	7 cut(s)	55, 821, 1087, 1795, 1867, 2427, 2633
AvrII	CCTAGG	1 cut(s)	688
BaeGI	GKGCMC	1 cut(s)	2052
BalI	TGGCCA	2 cut(s)	2653, 2897
BamHI	GGATCC	1 cut(s)	861
BanI	GGYRCC	3 cut(s)	199, 965, 2852
BanII	GRGCYC	2 cut(s)	165, 1044
BbsI	GAAGAC	4 cut(s)	80, 537, 1376, 1923
Bbv12I	GWGCWC	3 cut(s)	270, 1044, 2052
BbvI	GCAGC	5 cut(s)	136, 218, 501, 924, 2931
BccI	CCATC	9 cut(s)	236, 338, 568, 1504, 1890, 1981, 2464, 2552, 2624
BceAI	ACGGC	1 cut(s)	850
BcgI	CGANNNNNNTGC	2 cut(s)	1197, 1231
BciT130I	CCWGG	2 cut(s)	2205, 2431
BciVI	GTATCC	2 cut(s)	1763, 2266
BcnI	CCSGG	9 cut(s)	260, 346, 902, 903, 1264, 1503, 1715, 2131, 2806
BcoDI	GTCTC	8 cut(s)	458, 818, 984, 1356, 2219, 2451, 2904, 3136
BfaI	CTAG	6 cut(s)	689, 1439, 1643, 2168, 2235, 2435
BfoI	RGCGCY	3 cut(s)	1075, 1677, 2504
BfrI	CTTAAG	1 cut(s)	3137
BfuAI	ACCTGC	2 cut(s)	260, 2092
BfuI	GTATCC	2 cut(s)	1763, 2266
BglI	GCCNNNNNGGC	1 cut(s)	1746
BglII	AGATCT	1 cut(s)	2096
BlnI	CCTAGG	1 cut(s)	688
Bme18I	GGWCC	7 cut(s)	55, 821, 1087, 1795, 1867, 2427, 2633
BmeT110I	CYCGRG	2 cut(s)	418, 901
BmgT120I	GGNCC	8 cut(s)	55, 821, 1087, 1795, 1867, 2036, 2427, 2633
BmiI	GGNNCC	7 cut(s)	57, 201, 823, 863, 967, 2428, 2854
BmsI	GCATC	6 cut(s)	846, 906, 1581, 1653, 2996, 3078
BmtI	GCTAGC	2 cut(s)	1442, 2438
BoxI	GACNNNNGTC	2 cut(s)	1256, 2463
BpiI	GAAGAC	4 cut(s)	80, 537, 1376, 1923
BpmI	CTGGAG	6 cut(s)	1052, 1056, 1990, 1998, 2226, 2856
Bpu10I	CCTNAGC	2 cut(s)	1091, 2259
Bpu14I	TTCGAA	1 cut(s)	707
BpuEI	CTTGAG	5 cut(s)	446, 460, 887, 2362, 2960
BpuMI	CCSGG	9 cut(s)	260, 346, 902, 903, 1264, 1503, 1715, 2131, 2806
Bsa29I	ATCGAT	1 cut(s)	605
BsaAI	YACGTR	1 cut(s)	1537
BsaHI	GRCGYC	1 cut(s)	315
BsaI	GGTCTC	3 cut(s)	1356, 2219, 3136
BsaWI	WCCGGW	6 cut(s)	599, 610, 1490, 1828, 1889, 2951
BsaXI	ACNNNNNCTCC	2 cut(s)	1353, 1383
Bsc4I	CCNNNNNNNGG	7 cut(s)	159, 302, 858, 889, 1979, 2879, 2958
Bse118I	RCCGGY	4 cut(s)	610, 1490, 1616, 2087
Bse1I	ACTGG	7 cut(s)	883, 1039, 1595, 1652, 1750, 1822, 2615
Bse3DI	GCAATG	1 cut(s)	625
BseAI	TCCGGA	2 cut(s)	599, 1828
BseBI	CCWGG	2 cut(s)	2205, 2431
BseCI	ATCGAT	1 cut(s)	605
BseGI	GGATG	9 cut(s)	247, 268, 897, 1515, 1596, 2184, 2199, 2754, 3188
BseLI	CCNNNNNNNGG	7 cut(s)	159, 302, 858, 889, 1979, 2879, 2958
BseMI	GCAATG	1 cut(s)	625
BseMII	CTCAG	5 cut(s)	871, 1752, 2250, 2832, 3053
BseNI	ACTGG	7 cut(s)	883, 1039, 1595, 1652, 1750, 1822, 2615
BseRI	GAGGAG	6 cut(s)	932, 1578, 2223, 2691, 2922, 3037
BseSI	GKGCMC	1 cut(s)	2052
BseX3I	CGGCCG	1 cut(s)	460
BseXI	GCAGC	5 cut(s)	136, 218, 501, 924, 2931
BseYI	CCCAGC	4 cut(s)	1430, 2296, 3006, 3192
BsgI	GTGCAG	1 cut(s)	976
Bsh1236I	CGCG	2 cut(s)	171, 276
Bsh1285I	CGRYCG	3 cut(s)	169, 463, 2092
BshFI	GGCC	7 cut(s)	329, 462, 1616, 2037, 2653, 2897, 2962
BshNI	GGYRCC	3 cut(s)	199, 965, 2852
BshTI	ACCGGT	2 cut(s)	610, 1490
BshVI	ATCGAT	1 cut(s)	605
BsiEI	CGRYCG	3 cut(s)	169, 463, 2092
BsiHKAI	GWGCWC	3 cut(s)	270, 1044, 2052
BsiHKCI	CYCGRG	2 cut(s)	418, 901
BslFI	GGGAC	6 cut(s)	41, 542, 1977, 2440, 2788, 3199
BslI	CCNNNNNNNGG	7 cut(s)	159, 302, 858, 889, 1979, 2879, 2958
BsmAI	GTCTC	8 cut(s)	458, 818, 984, 1356, 2219, 2451, 2904, 3136
BsmBI	CGTCTC	2 cut(s)	458, 984
BsmFI	GGGAC	6 cut(s)	41, 542, 1977, 2440, 2788, 3199
BsmI	GAATGC	1 cut(s)	1824
BsnI	GGCC	7 cut(s)	329, 462, 1616, 2037, 2653, 2897, 2962
Bso31I	GGTCTC	3 cut(s)	1356, 2219, 3136
BsoBI	CYCGRG	2 cut(s)	418, 901
Bsp119I	TTCGAA	1 cut(s)	707
Bsp1286I	GDGCHC	4 cut(s)	165, 270, 1044, 2052
Bsp13I	TCCGGA	2 cut(s)	599, 1828
Bsp1407I	TGTACA	1 cut(s)	2728
Bsp68I	TCGCGA	1 cut(s)	171
BspACI	CCGC	6 cut(s)	274, 463, 624, 1018, 2034, 2720
BspANI	GGCC	7 cut(s)	329, 462, 1616, 2037, 2653, 2897, 2962
BspCNI	CTCAG	5 cut(s)	870, 1753, 2251, 2833, 3054
BspDI	ATCGAT	1 cut(s)	605
BspEI	TCCGGA	2 cut(s)	599, 1828
BspFNI	CGCG	2 cut(s)	171, 276
BspHI	TCATGA	1 cut(s)	840
BspLI	GGNNCC	7 cut(s)	57, 201, 823, 863, 967, 2428, 2854
BspMI	ACCTGC	2 cut(s)	260, 2092
BspOI	GCTAGC	2 cut(s)	1442, 2438
BspPI	GGATC	6 cut(s)	610, 856, 869, 2141, 2328, 3047
BspT104I	TTCGAA	1 cut(s)	707
BspT107I	GGYRCC	3 cut(s)	199, 965, 2852
BspTI	CTTAAG	1 cut(s)	3137
BspTNI	GGTCTC	3 cut(s)	1356, 2219, 3136
BsrDI	GCAATG	1 cut(s)	625
BsrFI	RCCGGY	4 cut(s)	610, 1490, 1616, 2087
BsrGI	TGTACA	1 cut(s)	2728
BsrI	ACTGG	7 cut(s)	883, 1039, 1595, 1652, 1750, 1822, 2615
BssAI	RCCGGY	4 cut(s)	610, 1490, 1616, 2087
BssNI	GRCGYC	1 cut(s)	315
BssT1I	CCWWGG	7 cut(s)	186, 296, 688, 1357, 1443, 2857, 2981
Bst2UI	CCWGG	2 cut(s)	2205, 2431
Bst4CI	ACNGT	3 cut(s)	204, 2047, 2921
BstACI	GRCGYC	1 cut(s)	315
BstAFI	CTTAAG	1 cut(s)	3137
BstAPI	GCANNNNNTGC	1 cut(s)	2786
BstAUI	TGTACA	1 cut(s)	2728
BstBAI	YACGTR	1 cut(s)	1537
BstBI	TTCGAA	1 cut(s)	707
BstEII	GGTNACC	1 cut(s)	914
BstF5I	GGATG	9 cut(s)	247, 268, 897, 1515, 1596, 2184, 2199, 2754, 3188
BstFNI	CGCG	2 cut(s)	171, 276
BstH2I	RGCGCY	3 cut(s)	1075, 1677, 2504
BstHHI	GCGC	3 cut(s)	1074, 1676, 2503
BstMAI	GTCTC	8 cut(s)	458, 818, 984, 1356, 2219, 2451, 2904, 3136
BstMCI	CGRYCG	3 cut(s)	169, 463, 2092
BstNI	CCWGG	2 cut(s)	2205, 2431
BstNSI	RCATGY	2 cut(s)	2704, 2786
BstPAI	GACNNNNGTC	2 cut(s)	1256, 2463
BstPI	GGTNACC	1 cut(s)	914
BstSLI	GKGCMC	1 cut(s)	2052
BstSNI	TACGTA	1 cut(s)	1537
BstUI	CGCG	2 cut(s)	171, 276
BstV1I	GCAGC	5 cut(s)	136, 218, 501, 924, 2931
BstV2I	GAAGAC	4 cut(s)	80, 537, 1376, 1923
BstX2I	RGATCY	4 cut(s)	861, 2096, 2133, 2320
BstYI	RGATCY	4 cut(s)	861, 2096, 2133, 2320
BstZI	CGGCCG	1 cut(s)	460
Bsu15I	ATCGAT	1 cut(s)	605
BsuI	GTATCC	2 cut(s)	1763, 2266
BsuRI	GGCC	7 cut(s)	329, 462, 1616, 2037, 2653, 2897, 2962
BsuTUI	ATCGAT	1 cut(s)	605
BtsCI	GGATG	9 cut(s)	247, 268, 897, 1515, 1596, 2184, 2199, 2754, 3188
BtsI	GCAGTG	2 cut(s)	71, 2508
BtsIMutI	CAGTG	7 cut(s)	71, 222, 570, 1114, 1815, 1945, 2508
BtuMI	TCGCGA	1 cut(s)	171
BveI	ACCTGC	2 cut(s)	260, 2092
CciI	TCATGA	1 cut(s)	840
CfoI	GCGC	3 cut(s)	1074, 1676, 2503
Cfr10I	RCCGGY	4 cut(s)	610, 1490, 1616, 2087
Cfr13I	GGNCC	8 cut(s)	55, 821, 1087, 1795, 1867, 2036, 2427, 2633
Cfr9I	CCCGGG	1 cut(s)	901
ClaI	ATCGAT	1 cut(s)	605
CseI	GACGC	2 cut(s)	182, 304
Csp6I	GTAC	5 cut(s)	1427, 1690, 1970, 2729, 2853
CspAI	ACCGGT	2 cut(s)	610, 1490
CspCI	CAANNNNNGTGG	2 cut(s)	1090, 1125
CviQI	GTAC	5 cut(s)	1427, 1690, 1970, 2729, 2853
EaeI	YGGCCR	4 cut(s)	327, 460, 2651, 2895
EagI	CGGCCG	1 cut(s)	460
Ecl136II	GAGCTC	1 cut(s)	1042
EclXI	CGGCCG	1 cut(s)	460
Eco105I	TACGTA	1 cut(s)	1537
Eco130I	CCWWGG	7 cut(s)	186, 296, 688, 1357, 1443, 2857, 2981
Eco147I	AGGCCT	1 cut(s)	2962
Eco24I	GRGCYC	2 cut(s)	165, 1044
Eco31I	GGTCTC	3 cut(s)	1356, 2219, 3136
Eco32I	GATATC	2 cut(s)	1191, 2740
Eco47I	GGWCC	7 cut(s)	55, 821, 1087, 1795, 1867, 2427, 2633
Eco47III	AGCGCT	1 cut(s)	1675
Eco52I	CGGCCG	1 cut(s)	460
Eco53kI	GAGCTC	1 cut(s)	1042
Eco57I	CTGAAG	7 cut(s)	482, 1090, 1301, 1370, 1921, 1943, 3077
Eco88I	CYCGRG	2 cut(s)	418, 901
Eco91I	GGTNACC	1 cut(s)	914
EcoICRI	GAGCTC	1 cut(s)	1042
EcoO109I	RGGNCCY	1 cut(s)	55
EcoO65I	GGTNACC	1 cut(s)	914
EcoRI	GAATTC	2 cut(s)	668, 2480
EcoRII	CCWGG	2 cut(s)	2203, 2429
EcoRV	GATATC	2 cut(s)	1191, 2740
EcoT14I	CCWWGG	7 cut(s)	186, 296, 688, 1357, 1443, 2857, 2981
EcoT38I	GRGCYC	2 cut(s)	165, 1044
ErhI	CCWWGG	7 cut(s)	186, 296, 688, 1357, 1443, 2857, 2981
Esp3I	CGTCTC	2 cut(s)	458, 984
FaqI	GGGAC	6 cut(s)	41, 542, 1977, 2440, 2788, 3199
FauI	CCCGC	1 cut(s)	617
FblI	GTMKAC	1 cut(s)	435
FokI	GGATG	9 cut(s)	254, 275, 884, 1522, 1603, 2186, 2191, 2741, 3175
FriOI	GRGCYC	2 cut(s)	165, 1044
FspBI	CTAG	6 cut(s)	689, 1439, 1643, 2168, 2235, 2435
GlaI	GCGC	3 cut(s)	1073, 1675, 2502
GsaI	CCCAGC	4 cut(s)	1434, 2300, 3010, 3196
GsuI	CTGGAG	6 cut(s)	1052, 1056, 1990, 1998, 2226, 2856
HaeII	RGCGCY	3 cut(s)	1075, 1677, 2504
HaeIII	GGCC	7 cut(s)	329, 462, 1616, 2037, 2653, 2897, 2962
HgaI	GACGC	2 cut(s)	182, 304
HhaI	GCGC	3 cut(s)	1074, 1676, 2503
Hin1I	GRCGYC	1 cut(s)	315
Hin6I	GCGC	3 cut(s)	1072, 1674, 2501
HinP1I	GCGC	3 cut(s)	1072, 1674, 2501
HincII	GTYRAC	3 cut(s)	436, 952, 3124
HindII	GTYRAC	3 cut(s)	436, 952, 3124
HindIII	AAGCTT	2 cut(s)	79, 710
Hpy166II	GTNNAC	7 cut(s)	436, 952, 1630, 2050, 2404, 2508, 3124
Hpy188I	TCNGA	7 cut(s)	21, 501, 698, 1281, 1299, 1762, 2469
Hpy8I	GTNNAC	7 cut(s)	436, 952, 1630, 2050, 2404, 2508, 3124
Hpy99I	CGWCG	4 cut(s)	161, 176, 320, 437
HpyCH4III	ACNGT	3 cut(s)	204, 2047, 2921
HpyCH4IV	ACGT	2 cut(s)	948, 1536
HpyCH4V	TGCA	9 cut(s)	993, 1140, 1290, 1921, 2050, 2539, 2554, 2704, 3013
HpySE526I	ACGT	2 cut(s)	948, 1536
Hsp92I	GRCGYC	1 cut(s)	315
HspAI	GCGC	3 cut(s)	1072, 1674, 2501
Kpn2I	TCCGGA	2 cut(s)	599, 1828
KpnI	GGTACC	1 cut(s)	2856
LmnI	GCTCC	3 cut(s)	945, 2260, 2678
Lsp1109I	GCAGC	5 cut(s)	136, 218, 501, 924, 2931
LweI	GCATC	6 cut(s)	846, 906, 1581, 1653, 2996, 3078
MaeI	CTAG	6 cut(s)	689, 1439, 1643, 2168, 2235, 2435
MaeII	ACGT	2 cut(s)	948, 1536
MaeIII	GTNAC	6 cut(s)	914, 1116, 1730, 2613, 2833, 2861
MfeI	CAATTG	1 cut(s)	107
MflI	RGATCY	4 cut(s)	861, 2096, 2133, 2320
MhlI	GDGCHC	4 cut(s)	165, 270, 1044, 2052
MlsI	TGGCCA	2 cut(s)	2653, 2897
MluNI	TGGCCA	2 cut(s)	2653, 2897
MlyI	GAGTC	5 cut(s)	430, 1057, 1447, 2115, 2821
MmeI	TCCRAC	5 cut(s)	811, 909, 1487, 1773, 2066
Mox20I	TGGCCA	2 cut(s)	2653, 2897
MroI	TCCGGA	2 cut(s)	599, 1828
MscI	TGGCCA	2 cut(s)	2653, 2897
MseI	TTAA	5 cut(s)	1148, 1479, 2442, 2573, 3138
Msp20I	TGGCCA	2 cut(s)	2653, 2897
MspA1I	CMGCKG	2 cut(s)	1434, 1699
MspCI	CTTAAG	1 cut(s)	3137
MunI	CAATTG	1 cut(s)	107
Mva1269I	GAATGC	1 cut(s)	1824
MvaI	CCWGG	2 cut(s)	2205, 2431
MvnI	CGCG	2 cut(s)	171, 276
NciI	CCSGG	9 cut(s)	260, 346, 902, 903, 1264, 1503, 1715, 2131, 2806
NheI	GCTAGC	2 cut(s)	1438, 2434
NlaIV	GGNNCC	7 cut(s)	57, 201, 823, 863, 967, 2428, 2854
NruI	TCGCGA	1 cut(s)	171
NspI	RCATGY	2 cut(s)	2704, 2786
NspV	TTCGAA	1 cut(s)	707
PagI	TCATGA	1 cut(s)	840
PaqCI	CACCTGC	2 cut(s)	260, 2092
PceI	AGGCCT	1 cut(s)	2962
PciI	ACATGT	1 cut(s)	2782
PctI	GAATGC	1 cut(s)	1824
PflFI	GACNNNGTC	1 cut(s)	2230
PflMI	CCANNNNNTGG	2 cut(s)	889, 2879
PfoI	TCCNGGA	1 cut(s)	2129
PinAI	ACCGGT	2 cut(s)	610, 1490
Ple19I	CGATCG	1 cut(s)	169
PleI	GAGTC	5 cut(s)	429, 1057, 1447, 2115, 2821
PpsI	GAGTC	5 cut(s)	429, 1057, 1447, 2115, 2821
Ppu21I	YACGTR	1 cut(s)	1537
PpuMI	RGGWCCY	1 cut(s)	55
PscI	ACATGT	1 cut(s)	2782
PshAI	GACNNNNGTC	2 cut(s)	1256, 2463
PsiI	TTATAA	3 cut(s)	506, 1487, 1806
Psp124BI	GAGCTC	1 cut(s)	1044
Psp5II	RGGWCCY	1 cut(s)	55
Psp6I	CCWGG	2 cut(s)	2203, 2429
PspEI	GGTNACC	1 cut(s)	914
PspFI	CCCAGC	4 cut(s)	1430, 2296, 3006, 3192
PspGI	CCWGG	2 cut(s)	2203, 2429
PspN4I	GGNNCC	7 cut(s)	57, 201, 823, 863, 967, 2428, 2854
PspPI	GGNCC	8 cut(s)	55, 821, 1087, 1795, 1867, 2036, 2427, 2633
PspPPI	RGGWCCY	1 cut(s)	55
PsuI	RGATCY	4 cut(s)	861, 2096, 2133, 2320
PsyI	GACNNNGTC	1 cut(s)	2230
PvuI	CGATCG	1 cut(s)	169
PvuII	CAGCTG	2 cut(s)	1434, 1699
RruI	TCGCGA	1 cut(s)	171
RsaI	GTAC	5 cut(s)	1428, 1691, 1971, 2730, 2854
RsaNI	GTAC	5 cut(s)	1427, 1690, 1970, 2729, 2853
SacI	GAGCTC	1 cut(s)	1044
SalI	GTCGAC	1 cut(s)	434
SaqAI	TTAA	5 cut(s)	1148, 1479, 2442, 2573, 3138
Sau96I	GGNCC	8 cut(s)	55, 821, 1087, 1795, 1867, 2036, 2427, 2633
SchI	GAGTC	5 cut(s)	430, 1057, 1447, 2115, 2821
SduI	GDGCHC	4 cut(s)	165, 270, 1044, 2052
SfaNI	GCATC	6 cut(s)	846, 906, 1581, 1653, 2996, 3078
SfuI	TTCGAA	1 cut(s)	707
SinI	GGWCC	7 cut(s)	55, 821, 1087, 1795, 1867, 2427, 2633
SmaI	CCCGGG	1 cut(s)	903
SmlI	CTYRAG	6 cut(s)	425, 439, 866, 2341, 2939, 3137
SmoI	CTYRAG	6 cut(s)	425, 439, 866, 2341, 2939, 3137
SnaBI	TACGTA	1 cut(s)	1537
SseBI	AGGCCT	1 cut(s)	2962
SsiI	CCGC	6 cut(s)	274, 463, 624, 1018, 2034, 2720
SspI	AATATT	2 cut(s)	768, 2668
SspMI	CTAG	6 cut(s)	689, 1439, 1643, 2168, 2235, 2435
SstI	GAGCTC	1 cut(s)	1044
StuI	AGGCCT	1 cut(s)	2962
StyI	CCWWGG	7 cut(s)	186, 296, 688, 1357, 1443, 2857, 2981
TaaI	ACNGT	3 cut(s)	204, 2047, 2921
TaiI	ACGT	2 cut(s)	951, 1539
TatI	WGTACW	2 cut(s)	1689, 2728
TauI	GCSGC	5 cut(s)	276, 465, 1021, 2037, 2722
Tru1I	TTAA	5 cut(s)	1148, 1479, 2442, 2573, 3138
Tru9I	TTAA	5 cut(s)	1148, 1479, 2442, 2573, 3138
TscAI	CASTG	7 cut(s)	78, 229, 570, 1114, 1822, 1945, 2515
TseI	GCWGC	5 cut(s)	149, 231, 489, 937, 2944
TspDTI	ATGAA	6 cut(s)	38, 681, 777, 857, 1775, 2325
TspGWI	ACGGA	2 cut(s)	559, 966
TspMI	CCCGGG	1 cut(s)	901
TspRI	CASTG	7 cut(s)	78, 229, 570, 1114, 1822, 1945, 2515
Tth111I	GACNNNGTC	1 cut(s)	2230
Van91I	CCANNNNNTGG	2 cut(s)	889, 2879
Vha464I	CTTAAG	1 cut(s)	3137
VneI	GTGCAC	1 cut(s)	2048
VpaK11BI	GGWCC	7 cut(s)	55, 821, 1087, 1795, 1867, 2427, 2633
XapI	RAATTY	5 cut(s)	668, 1012, 1321, 2480, 2771
XbaI	TCTAGA	1 cut(s)	1642
XceI	RCATGY	2 cut(s)	2704, 2786
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1889
XmaI	CCCGGG	1 cut(s)	901
XmaJI	CCTAGG	1 cut(s)	688
XmiI	GTMKAC	1 cut(s)	435
XspI	CTAG	6 cut(s)	689, 1439, 1643, 2168, 2235, 2435

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.