MD17G1156200.v1.1
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
Physical Location & Seq
Reverse (-)
14936283 .. 14939474
3192 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1156200.v1.1.491

Sequence Viewer

Length: 3192 bp
ATGAAACACGACAAGCAGAAGGTGAAGGTCCCAGCAATACCAACACCACCAACCTTTCGTCTTCTCTGCTATTTGGGTCAATGGATTCTCGTCCTTCTCATTCTTCCTTGCTCTGCCTCTGCTGCCTGCGACCGGCTCGATCGCGACGCTCTTTTGTCCTTGCCCTTCAACACACCGTTGAATTGGTCTGCTTCCACTGACTGCTGCCTTTGGGATGGAGTCACCTGCGACCCGGTTGAGCACAGCCGCGTCGTCCGGCTTTCTCTGCCCAGGAGAGGCTTATCCGGTGTCGTCTCTCCGTCCATCACCAACCTCACCCGTCTCACCCACCTCAATCTTTCCCACAATTCCCTCTTGGGTTCTCTCCCAGACGACTTGCTTTCTTCCCTCCCAAGTATTGAGGTCATTGACTTGAGCTTCAATCGTCTCATCGGCCGCTTCCCACAATCCTCCCATGAAAGCAGCCACCTGCAGATTATAAACTTGTCCAGCAACTTCTTCAATGGAACAATCCCAGCTTCGATCCTCGTCCCTTCAGTGTCCGTTTTCAATGTCAGCAACAACAGCTTTTCGGGACCGATACCGGTCAGCAATGGCGGGAATCACACTTCCCTTACCTTCTTGGACTTGTCCTTCAATAAATTCACCGGCCCAATTCCCCCAGGAATCGGATTGTGTTCGAGGCTCCAAACTTTTCGGGCAGGTTTCAATGCCCTCAATGGTTATCTCCCTGATGAAATTTTTATGCTTGCTGATCTCCAACAGCTCTCTCTGCCTGTCAATATTCTCTCTGGACCCATCAGTGATGGCATCATGAACCTCACCAATCTCAGGATCCTCGAGCTTTATTCGAACAACTTCTTTGGGCAAATCCCTGGGGATATTGGTAACCTTTTCAGGTTGGAGAATCTGCTCCTCCACATCAACAACTTCACAGGTGCCTTGCCTCCGTCCCTCACCAACTGCACAAATCTATCCACCTTGAATTTGCGGGTTAACAACTTAAATGGACAGCTCTCTGCCTTCAATTTTTCCACTCTCCAACGCCTCGCCACTCTGGACCTTGGCAACAACAACTTCATTGGTGAGTTACCTCAAAGCCTCTACTCGTGCAAGTCCTTAACTGCTATTAGATTGGCTAGCAACCAGCTCACTGGCGAGATATCACCTGAAATAGTCGCGTTAGAATCGTTGTCTTTCCTGTCCATCTCTACCAACAGCCTGACAAATGCCGCGGGGGCTTTTAGGAATCTGAAGGGTTGCAAGAATCTGACCACTCTGGTCTTGTCGAAGAATTTTTGGAATGAGGCTTTGCCAGATGATAAAAGCCTTGGAGCCCCAGTTGGATTCCAAAGTCTTCAGGTTTTTGCTATCGGGGGTTGCCAATTCACAGGTCAAGTACCCACCTGGCTAGCCAATGTTACAAATCTTGAAGTCTTGGACTTGTCGTTTAATTTTATAACTGGTTCGATCCCCGGTTGGTTGGGCAGTCTGCACAACCTTTTCTACGTTGATTTGTCTAATAACCACCTTAGAGGAGGATTTCCTCTTGAGTTCTGCTGGATGCAAGCTTTGACATTGAAAGAGGCTAGTGAGATAGTGGACAGAAGTTATCTAGAGTTGCCTGTCTTTGTGATGCCCAACAGTGCTACTAATCAGCAGTACAATCAGTTGTCCAACCTCCCCCCGGCAATATATTTGGGTAACAACAGCCTTACTGGCAGTATCCCCATTGAGATTGGTCAATTGAAGTATATTCATGTGATGGACCTCAGTCATAACAACTTCACTGGCTGCATCCCGGAACAAATTTCTAACCTGACCAACTTAGAGAAATTGGACCTCTCCTATAACCATCTTTCCGGTGAAATCCCTGCTTCTCTCAAAGGTCTGCATTTCTTGTCTTCCTTCAGTGTGGCTTACAATGATCTTAAGGGACTTGTACCATCTGGAGGTCAGTTTGATACTTTTATGAACTCCAGCTTTGAAGGGAATGCTGGACTATGCGGCCCTCCAACTGCTCACATCACTTGCCCTCAACCTTTATCACCTGCTGGTCGAAGATCTAACAGAAACCTTCTTATTGGGCTCACCTTTGGGATCTGTTTTGGCATTGTATTTATTGTTGTCTTGTTAGTAGTGTGGATGTTGTCTAATAGAAAAATCATTCCTGGAGGAGATACTGACAAGACGGATTTCGAGACCATGTCTAGCCAATCTACTGTTGTTGCTCCTGAGCTTGACAAGGATACCAGCTTAGTCATACTGTTCCCAACCAAGACCAATGAAATCAAGGATCTTAGTATAACTGAAATCTTGAAGGCGACTGACAATTTCAGTCAAGCAAACATCATTGGGTGTGGAGGTTTTGGTCTGGTTTACAGAGCAACGTTGGCAAATGGGACCAGGCTAGCTGTTAAGAAACTCTCAGGAGACTTGGGTCTGGTGGAAAGGGAATTCACAGCAGAAGTTGAGGCACTGTCCACTGCCCAACATGAGAATCTGGTTTCCCTGCAAGGTTATTGCGTGCATGATGGTGTTCGCCTATTAATGTATTCGTATATGGAGAATGGGAGTCTGGATTACTGGTTACATGAGAAAGTGGATGGTCCTTCCCAATTAGATTGGTCAATTCGACTGAATATTTTGCGAGGAGCAGGCTGTGGGTTGGCTTACATGCACCAAATATGTGAGCCGCACATTGTGCATCGTGATATCAAGTCAAGCAACATCCTCCTGGATGATAAATTTCAAGCACATGTTGCTGATTTTGGATTGTCCCGGTTGATTCTTCCGTACCAGACTCATGTTACAACCGAGCTTGTTGGAACTCTTGGTTACATTCCTCCAGAGTATGGACAAGCATGGGTGGCCACTTTGAGAGGAGATATGTACAGTTTCGGGGTTGTCATGCTTGAGCTGCTAACCGGAAAAAGGCCTTTTGAGGTATGCAAGCCAAGGGGGTCAAGAGAGTTGGTTGGCTGGGTGCAGCAAATGAGGAGAGAAGGCAAACCTGAGGAAGTTTTTGATCCTCTCCTGAGAGGGAAAGGCTTTGAAGAAGAGATGCTGCAGGTTCTTGATGTTGCTTGCTTGTGTGTCAACCAGAACCATCTTAAGAGACCTACGATCAAGGAAGTTATCAGTTGGCTGAAAGATGTTGGGACATCCCAGCAACATGAAGATAAAGACTAG

Protein Analysis

1064

Amino Acids

116.75

Weight (kDa)

5.74

Isoelectric Point (pI)

37.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_8 PF13855 84 - 143 7.7e-06 Leucine rich repeat
LRR_14 PF23598 181 - 439 9.8e-12 Leucine-rich repeat region
LRR_14 PF23598 294 - 511 5.4e-11 Leucine-rich repeat region
LRR_8 PF13855 452 - 511 2.4e-08 Leucine rich repeat
LRR_8 PF13855 587 - 644 4.4e-07 Leucine rich repeat
Pkinase PF00069 780 - 1047 1.8e-37 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 782 - 1047 3.2e-37 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 479, 1460
AarI CACCTGC 3 cut(s) 233, 477, 2059
Acc36I ACCTGC 5 cut(s) 233, 477, 692, 2059, 3061
AccB1I GGYRCC 1 cut(s) 938
AccB7I CCANNNNNTGG 1 cut(s) 2855
AccII CGCG 4 cut(s) 144, 249, 1181, 1235
AciI CCGC 8 cut(s) 247, 436, 597, 991, 1233, 1235, 2007, 2696
AclI AACGTT 1 cut(s) 2390
AclWI GGATC 7 cut(s) 517, 829, 842, 1465, 2108, 2304, 3023
AcoI YGGCCR 2 cut(s) 433, 2871
AcsI RAATTY 7 cut(s) 641, 738, 985, 1294, 1809, 2456, 2747
AcuI CTGAAG 4 cut(s) 519, 1274, 1343, 1894
AdeI CACNNNGTG 1 cut(s) 2704
AfaI GTAC 5 cut(s) 1401, 1664, 1944, 2798, 2894
AfiI CCNNNNNNNGG 8 cut(s) 132, 275, 668, 831, 1687, 1952, 2855, 2934
AflII CTTAAG 2 cut(s) 1931, 3113
AflIII ACRYGT 1 cut(s) 2758
AgeI ACCGGT 1 cut(s) 583
AjnI CCWGG 7 cut(s) 269, 661, 874, 1406, 2170, 2405, 2736
Alw21I GWGCWC 1 cut(s) 243
Alw26I GTCTC 6 cut(s) 298, 326, 431, 2195, 2427, 3112
AlwI GGATC 7 cut(s) 517, 829, 842, 1465, 2108, 2304, 3023
Ama87I CYCGRG 1 cut(s) 839
AoxI GGCC 5 cut(s) 433, 649, 2008, 2871, 2936
ApeKI GCWGC 7 cut(s) 122, 204, 462, 1794, 2920, 2989, 3067
ApoI RAATTY 7 cut(s) 641, 738, 985, 1294, 1809, 2456, 2747
AseI ATTAAT 1 cut(s) 2549
AsiGI ACCGGT 1 cut(s) 583
Asp700I GAANNNNTTC 1 cut(s) 857
AsuC2I CCSGG 5 cut(s) 233, 1476, 1688, 1802, 2782
AsuII TTCGAA 1 cut(s) 851
AsuNHI GCTAGC 3 cut(s) 1139, 1411, 2410
AvaI CYCGRG 1 cut(s) 839
AvaII GGWCC 8 cut(s) 28, 575, 794, 1060, 1768, 1840, 2403, 2609
AxyI CCTNAGG 1 cut(s) 3015
BalI TGGCCA 1 cut(s) 2873
BamHI GGATCC 1 cut(s) 834
BanI GGYRCC 1 cut(s) 938
BanII GRGCYC 2 cut(s) 1339, 2091
BauI CACGAG 1 cut(s) 1108
BbsI GAAGAC 3 cut(s) 53, 1349, 1896
Bbv12I GWGCWC 1 cut(s) 243
BbvI GCAGC 7 cut(s) 109, 191, 474, 1781, 2907, 3001, 3054
BciT130I CCWGG 7 cut(s) 271, 663, 876, 1408, 2172, 2407, 2738
BciVI GTATCC 2 cut(s) 1736, 2242
BcnI CCSGG 5 cut(s) 233, 1476, 1688, 1802, 2782
BcoDI GTCTC 6 cut(s) 298, 326, 431, 2195, 2427, 3112
BfaI CTAG 7 cut(s) 1140, 1412, 1590, 1616, 2211, 2411, 3190
BfmI CTRYAG 2 cut(s) 470, 3068
BfrI CTTAAG 2 cut(s) 1931, 3113
BfuAI ACCTGC 5 cut(s) 233, 477, 692, 2059, 3061
BfuI GTATCC 2 cut(s) 1736, 2242
BglI GCCNNNNNGGC 2 cut(s) 1238, 1719
BglII AGATCT 1 cut(s) 2063
Bme18I GGWCC 8 cut(s) 28, 575, 794, 1060, 1768, 1840, 2403, 2609
BmeT110I CYCGRG 1 cut(s) 839
BmiI GGNNCC 8 cut(s) 30, 576, 686, 796, 836, 940, 1336, 2404
BmrI ACTGGG 1 cut(s) 1334
BmsI GCATC 6 cut(s) 819, 1554, 1626, 1806, 2716, 3054
BmtI GCTAGC 3 cut(s) 1143, 1415, 2414
BmuI ACTGGG 1 cut(s) 1334
BoxI GACNNNNGTC 2 cut(s) 1773, 2439
BpiI GAAGAC 3 cut(s) 53, 1349, 1896
BpmI CTGGAG 4 cut(s) 1963, 1971, 2193, 2832
Bpu10I CCTNAGC 1 cut(s) 2235
Bpu14I TTCGAA 1 cut(s) 851
BpuEI CTTGAG 3 cut(s) 433, 1571, 2936
BpuMI CCSGG 5 cut(s) 233, 1476, 1688, 1802, 2782
BsaI GGTCTC 2 cut(s) 2195, 3112
BsaWI WCCGGW 4 cut(s) 284, 583, 1862, 2927
BsaXI ACNNNNNCTCC 2 cut(s) 1326, 1356
Bsc4I CCNNNNNNNGG 8 cut(s) 132, 275, 668, 831, 1687, 1952, 2855, 2934
Bse118I RCCGGY 3 cut(s) 132, 583, 647
Bse1I ACTGG 6 cut(s) 1159, 1340, 1468, 1723, 1795, 2591
Bse21I CCTNAGG 1 cut(s) 3015
Bse3DI GCAATG 1 cut(s) 598
BseBI CCWGG 7 cut(s) 271, 663, 876, 1408, 2172, 2407, 2738
BseGI GGATG 8 cut(s) 220, 1569, 1797, 2151, 2611, 2730, 2746, 3164
BseLI CCNNNNNNNGG 8 cut(s) 132, 275, 668, 831, 1687, 1952, 2855, 2934
BseMI GCAATG 1 cut(s) 598
BseMII CTCAG 6 cut(s) 844, 1786, 2226, 2442, 3006, 3029
BseNI ACTGG 6 cut(s) 1159, 1340, 1468, 1723, 1795, 2591
BseRI GAGGAG 6 cut(s) 905, 1551, 2190, 2667, 2898, 3013
BseX3I CGGCCG 1 cut(s) 433
BseXI GCAGC 7 cut(s) 109, 191, 474, 1781, 2907, 3001, 3054
BseYI CCCAGC 4 cut(s) 31, 514, 2982, 3168
BsgI GTGCAG 3 cut(s) 949, 1478, 3008
Bsh1236I CGCG 4 cut(s) 144, 249, 1181, 1235
Bsh1285I CGRYCG 3 cut(s) 133, 142, 436
BshFI GGCC 5 cut(s) 435, 651, 2010, 2873, 2938
BshNI GGYRCC 1 cut(s) 938
BshTI ACCGGT 1 cut(s) 583
BsiEI CGRYCG 3 cut(s) 133, 142, 436
BsiHKAI GWGCWC 1 cut(s) 243
BsiHKCI CYCGRG 1 cut(s) 839
BslFI GGGAC 8 cut(s) 14, 515, 588, 937, 1950, 2416, 2764, 3175
BslI CCNNNNNNNGG 8 cut(s) 132, 275, 668, 831, 1687, 1952, 2855, 2934
BsmAI GTCTC 6 cut(s) 298, 326, 431, 2195, 2427, 3112
BsmBI CGTCTC 3 cut(s) 298, 326, 431
BsmFI GGGAC 8 cut(s) 14, 515, 588, 937, 1950, 2416, 2764, 3175
BsmI GAATGC 1 cut(s) 1999
BsnI GGCC 5 cut(s) 435, 651, 2010, 2873, 2938
Bso31I GGTCTC 2 cut(s) 2195, 3112
BsoBI CYCGRG 1 cut(s) 839
Bsp119I TTCGAA 1 cut(s) 851
Bsp1286I GDGCHC 3 cut(s) 243, 1339, 2091
Bsp1407I TGTACA 1 cut(s) 2892
Bsp68I TCGCGA 1 cut(s) 144
BspACI CCGC 8 cut(s) 247, 436, 597, 991, 1233, 1235, 2007, 2696
BspANI GGCC 5 cut(s) 435, 651, 2010, 2873, 2938
BspCNI CTCAG 6 cut(s) 843, 1785, 2227, 2441, 3007, 3030
BspFNI CGCG 4 cut(s) 144, 249, 1181, 1235
BspHI TCATGA 1 cut(s) 813
BspLI GGNNCC 8 cut(s) 30, 576, 686, 796, 836, 940, 1336, 2404
BspMAI CTGCAG 2 cut(s) 474, 3072
BspMI ACCTGC 5 cut(s) 233, 477, 692, 2059, 3061
BspOI GCTAGC 3 cut(s) 1143, 1415, 2414
BspPI GGATC 7 cut(s) 517, 829, 842, 1465, 2108, 2304, 3023
BspT104I TTCGAA 1 cut(s) 851
BspT107I GGYRCC 1 cut(s) 938
BspTI CTTAAG 2 cut(s) 1931, 3113
BspTNI GGTCTC 2 cut(s) 2195, 3112
BsrDI GCAATG 1 cut(s) 598
BsrFI RCCGGY 3 cut(s) 132, 583, 647
BsrGI TGTACA 1 cut(s) 2892
BsrI ACTGG 6 cut(s) 1159, 1340, 1468, 1723, 1795, 2591
BssAI RCCGGY 3 cut(s) 132, 583, 647
BssSI CACGAG 1 cut(s) 1108
BssT1I CCWWGG 3 cut(s) 1063, 1330, 2957
Bst2BI CACGAG 1 cut(s) 1108
Bst2UI CCWGG 7 cut(s) 271, 663, 876, 1408, 2172, 2407, 2738
Bst4CI ACNGT 6 cut(s) 177, 1646, 2224, 2268, 2481, 2897
Bst6I CTCTTC 1 cut(s) 3054
BstAFI CTTAAG 2 cut(s) 1931, 3113
BstAPI GCANNNNNTGC 2 cut(s) 2704, 2762
BstAUI TGTACA 1 cut(s) 2892
BstBI TTCGAA 1 cut(s) 851
BstDSI CCRYGG 1 cut(s) 1233
BstEII GGTNACC 1 cut(s) 887
BstF5I GGATG 8 cut(s) 220, 1569, 1797, 2151, 2611, 2730, 2746, 3164
BstFNI CGCG 4 cut(s) 144, 249, 1181, 1235
BstMAI GTCTC 6 cut(s) 298, 326, 431, 2195, 2427, 3112
BstMCI CGRYCG 3 cut(s) 133, 142, 436
BstNI CCWGG 7 cut(s) 271, 663, 876, 1408, 2172, 2407, 2738
BstNSI RCATGY 2 cut(s) 2680, 2762
BstPAI GACNNNNGTC 2 cut(s) 1773, 2439
BstPI GGTNACC 1 cut(s) 887
BstSFI CTRYAG 2 cut(s) 470, 3068
BstUI CGCG 4 cut(s) 144, 249, 1181, 1235
BstV1I GCAGC 7 cut(s) 109, 191, 474, 1781, 2907, 3001, 3054
BstV2I GAAGAC 3 cut(s) 53, 1349, 1896
BstX2I RGATCY 4 cut(s) 834, 2063, 2100, 2296
BstXI CCANNNNNNTGG 1 cut(s) 1154
BstYI RGATCY 4 cut(s) 834, 2063, 2100, 2296
BstZI CGGCCG 1 cut(s) 433
Bsu36I CCTNAGG 1 cut(s) 3015
BsuI GTATCC 2 cut(s) 1736, 2242
BsuRI GGCC 5 cut(s) 435, 651, 2010, 2873, 2938
BtgI CCRYGG 1 cut(s) 1233
BtsCI GGATG 8 cut(s) 220, 1569, 1797, 2151, 2611, 2730, 2746, 3164
BtsI GCAGTG 1 cut(s) 2484
BtsIMutI CAGTG 9 cut(s) 195, 543, 808, 1152, 1651, 1788, 1918, 2477, 2484
BtuMI TCGCGA 1 cut(s) 144
BveI ACCTGC 5 cut(s) 233, 477, 692, 2059, 3061
CciI TCATGA 1 cut(s) 813
Cfr10I RCCGGY 3 cut(s) 132, 583, 647
Cfr42I CCGCGG 1 cut(s) 1236
CseI GACGC 2 cut(s) 155, 238
Csp6I GTAC 5 cut(s) 1400, 1663, 1943, 2797, 2893
CspAI ACCGGT 1 cut(s) 583
CviQI GTAC 5 cut(s) 1400, 1663, 1943, 2797, 2893
DraIII CACNNNGTG 1 cut(s) 2704
EaeI YGGCCR 2 cut(s) 433, 2871
EagI CGGCCG 1 cut(s) 433
Eam1104I CTCTTC 1 cut(s) 3054
EarI CTCTTC 1 cut(s) 3054
EclXI CGGCCG 1 cut(s) 433
Eco130I CCWWGG 3 cut(s) 1063, 1330, 2957
Eco147I AGGCCT 1 cut(s) 2938
Eco24I GRGCYC 2 cut(s) 1339, 2091
Eco31I GGTCTC 2 cut(s) 2195, 3112
Eco32I GATATC 2 cut(s) 1164, 2716
Eco47I GGWCC 8 cut(s) 28, 575, 794, 1060, 1768, 1840, 2403, 2609
Eco52I CGGCCG 1 cut(s) 433
Eco57I CTGAAG 4 cut(s) 519, 1274, 1343, 1894
Eco81I CCTNAGG 1 cut(s) 3015
Eco88I CYCGRG 1 cut(s) 839
Eco91I GGTNACC 1 cut(s) 887
EcoO109I RGGNCCY 1 cut(s) 28
EcoO65I GGTNACC 1 cut(s) 887
EcoRI GAATTC 1 cut(s) 2456
EcoRII CCWGG 7 cut(s) 269, 661, 874, 1406, 2170, 2405, 2736
EcoRV GATATC 2 cut(s) 1164, 2716
EcoT14I CCWWGG 3 cut(s) 1063, 1330, 2957
EcoT38I GRGCYC 2 cut(s) 1339, 2091
ErhI CCWWGG 3 cut(s) 1063, 1330, 2957
Esp3I CGTCTC 3 cut(s) 298, 326, 431
FaqI GGGAC 8 cut(s) 14, 515, 588, 937, 1950, 2416, 2764, 3175
FauI CCCGC 3 cut(s) 590, 984, 1228
FokI GGATG 8 cut(s) 227, 1576, 1784, 2158, 2618, 2717, 2753, 3151
FriOI GRGCYC 2 cut(s) 1339, 2091
FspBI CTAG 7 cut(s) 1140, 1412, 1590, 1616, 2211, 2411, 3190
GsaI CCCAGC 4 cut(s) 35, 518, 2986, 3172
GsuI CTGGAG 4 cut(s) 1963, 1971, 2193, 2832
HaeIII GGCC 5 cut(s) 435, 651, 2010, 2873, 2938
HgaI GACGC 2 cut(s) 155, 238
HincII GTYRAC 2 cut(s) 997, 3100
HindII GTYRAC 2 cut(s) 997, 3100
HindIII AAGCTT 1 cut(s) 1569
HpaI GTTAAC 1 cut(s) 997
Hpy166II GTNNAC 5 cut(s) 997, 1603, 2380, 2484, 3100
Hpy188I TCNGA 3 cut(s) 671, 1254, 1272
Hpy8I GTNNAC 5 cut(s) 997, 1603, 2380, 2484, 3100
Hpy99I CGWCG 2 cut(s) 149, 254
HpyCH4III ACNGT 6 cut(s) 177, 1646, 2224, 2268, 2481, 2897
HpyCH4IV ACGT 2 cut(s) 1509, 2390
HpySE526I ACGT 2 cut(s) 1509, 2390
KspAI GTTAAC 1 cut(s) 997
KspI CCGCGG 1 cut(s) 1236
LmnI GCTCC 5 cut(s) 690, 918, 1334, 2236, 2654
Lsp1109I GCAGC 7 cut(s) 109, 191, 474, 1781, 2907, 3001, 3054
LweI GCATC 6 cut(s) 819, 1554, 1626, 1806, 2716, 3054
MaeI CTAG 7 cut(s) 1140, 1412, 1590, 1616, 2211, 2411, 3190
MaeII ACGT 2 cut(s) 1509, 2390
MaeIII GTNAC 8 cut(s) 220, 887, 1089, 1420, 1703, 2589, 2809, 2837
MfeI CAATTG 1 cut(s) 1745
MflI RGATCY 4 cut(s) 834, 2063, 2100, 2296
MhlI GDGCHC 3 cut(s) 243, 1339, 2091
MlsI TGGCCA 1 cut(s) 2873
MluNI TGGCCA 1 cut(s) 2873
MlyI GAGTC 3 cut(s) 228, 2584, 2797
MmeI TCCRAC 7 cut(s) 784, 882, 1066, 1324, 1701, 2039, 2806
Mox20I TGGCCA 1 cut(s) 2873
MroXI GAANNNNTTC 1 cut(s) 857
MscI TGGCCA 1 cut(s) 2873
MseI TTAA 8 cut(s) 996, 1004, 1121, 1452, 1932, 2418, 2549, 3114
MslI CAYNNNNRTG 1 cut(s) 2535
Msp20I TGGCCA 1 cut(s) 2873
MspA1I CMGCKG 1 cut(s) 1235
MspCI CTTAAG 2 cut(s) 1931, 3113
MunI CAATTG 1 cut(s) 1745
Mva1269I GAATGC 1 cut(s) 1999
MvaI CCWGG 7 cut(s) 271, 663, 876, 1408, 2172, 2407, 2738
MvnI CGCG 4 cut(s) 144, 249, 1181, 1235
NciI CCSGG 5 cut(s) 233, 1476, 1688, 1802, 2782
NheI GCTAGC 3 cut(s) 1139, 1411, 2410
NlaIV GGNNCC 8 cut(s) 30, 576, 686, 796, 836, 940, 1336, 2404
NmuCI GTSAC 1 cut(s) 220
NruI TCGCGA 1 cut(s) 144
NspI RCATGY 2 cut(s) 2680, 2762
NspV TTCGAA 1 cut(s) 851
PaeR7I CTCGAG 1 cut(s) 839
PagI TCATGA 1 cut(s) 813
PaqCI CACCTGC 3 cut(s) 233, 477, 2059
PasI CCCWGGG 1 cut(s) 875
PceI AGGCCT 1 cut(s) 2938
PciI ACATGT 1 cut(s) 2758
PctI GAATGC 1 cut(s) 1999
PdmI GAANNNNTTC 1 cut(s) 857
PflFI GACNNNGTC 1 cut(s) 2206
PflMI CCANNNNNTGG 1 cut(s) 2855
PfoI TCCNGGA 3 cut(s) 1800, 2170, 2736
PinAI ACCGGT 1 cut(s) 583
Ple19I CGATCG 1 cut(s) 142
PleI GAGTC 3 cut(s) 227, 2583, 2797
PpsI GAGTC 3 cut(s) 227, 2583, 2797
PpuMI RGGWCCY 1 cut(s) 28
PscI ACATGT 1 cut(s) 2758
PshAI GACNNNNGTC 2 cut(s) 1773, 2439
PshBI ATTAAT 1 cut(s) 2549
PsiI TTATAA 2 cut(s) 479, 1460
Psp1406I AACGTT 1 cut(s) 2390
Psp5II RGGWCCY 1 cut(s) 28
Psp6I CCWGG 7 cut(s) 269, 661, 874, 1406, 2170, 2405, 2736
PspEI GGTNACC 1 cut(s) 887
PspFI CCCAGC 4 cut(s) 31, 514, 2982, 3168
PspGI CCWGG 7 cut(s) 269, 661, 874, 1406, 2170, 2405, 2736
PspN4I GGNNCC 8 cut(s) 30, 576, 686, 796, 836, 940, 1336, 2404
PspPPI RGGWCCY 1 cut(s) 28
PspXI VCTCGAGB 1 cut(s) 839
PstI CTGCAG 2 cut(s) 474, 3072
PsuI RGATCY 4 cut(s) 834, 2063, 2100, 2296
PsyI GACNNNGTC 1 cut(s) 2206
PvuI CGATCG 1 cut(s) 142
RruI TCGCGA 1 cut(s) 144
RsaI GTAC 5 cut(s) 1401, 1664, 1944, 2798, 2894
RsaNI GTAC 5 cut(s) 1400, 1663, 1943, 2797, 2893
RseI CAYNNNNRTG 1 cut(s) 2535
SacII CCGCGG 1 cut(s) 1236
SaqAI TTAA 8 cut(s) 996, 1004, 1121, 1452, 1932, 2418, 2549, 3114
SchI GAGTC 3 cut(s) 228, 2584, 2797
SduI GDGCHC 3 cut(s) 243, 1339, 2091
SfaNI GCATC 6 cut(s) 819, 1554, 1626, 1806, 2716, 3054
SfcI CTRYAG 2 cut(s) 470, 3068
Sfr274I CTCGAG 1 cut(s) 839
Sfr303I CCGCGG 1 cut(s) 1236
SfuI TTCGAA 1 cut(s) 851
SgrBI CCGCGG 1 cut(s) 1236
SinI GGWCC 8 cut(s) 28, 575, 794, 1060, 1768, 1840, 2403, 2609
SlaI CTCGAG 1 cut(s) 839
SmiMI CAYNNNNRTG 1 cut(s) 2535
SmlI CTYRAG 6 cut(s) 412, 839, 1550, 1931, 2915, 3113
SmoI CTYRAG 6 cut(s) 412, 839, 1550, 1931, 2915, 3113
SseBI AGGCCT 1 cut(s) 2938
SsiI CCGC 8 cut(s) 247, 436, 597, 991, 1233, 1235, 2007, 2696
SspI AATATT 2 cut(s) 784, 2644
SspMI CTAG 7 cut(s) 1140, 1412, 1590, 1616, 2211, 2411, 3190
StuI AGGCCT 1 cut(s) 2938
StyI CCWWGG 3 cut(s) 1063, 1330, 2957
TaaI ACNGT 6 cut(s) 177, 1646, 2224, 2268, 2481, 2897
TaiI ACGT 2 cut(s) 1512, 2393
TaqII GACCGA 1 cut(s) 592
TatI WGTACW 2 cut(s) 1662, 2892
TauI GCSGC 5 cut(s) 249, 438, 1235, 2010, 2698
Tru1I TTAA 8 cut(s) 996, 1004, 1121, 1452, 1932, 2418, 2549, 3114
Tru9I TTAA 8 cut(s) 996, 1004, 1121, 1452, 1932, 2418, 2549, 3114
TscAI CASTG 9 cut(s) 202, 543, 808, 1159, 1651, 1795, 1918, 2484, 2491
TseFI GTSAC 1 cut(s) 220
TseI GCWGC 7 cut(s) 122, 204, 462, 1794, 2920, 2989, 3067
Tsp45I GTSAC 1 cut(s) 220
TspDTI ATGAA 9 cut(s) 17, 471, 750, 830, 1069, 1748, 1988, 2301, 3192
TspGWI ACGGA 5 cut(s) 288, 532, 939, 2207, 2784
TspRI CASTG 9 cut(s) 202, 543, 808, 1159, 1651, 1795, 1918, 2484, 2491
Tth111I GACNNNGTC 1 cut(s) 2206
Van91I CCANNNNNTGG 1 cut(s) 2855
Vha464I CTTAAG 2 cut(s) 1931, 3113
VpaK11BI GGWCC 8 cut(s) 28, 575, 794, 1060, 1768, 1840, 2403, 2609
VspI ATTAAT 1 cut(s) 2549
XapI RAATTY 7 cut(s) 641, 738, 985, 1294, 1809, 2456, 2747
XbaI TCTAGA 1 cut(s) 1615
XceI RCATGY 2 cut(s) 2680, 2762
XhoI CTCGAG 1 cut(s) 839
XmnI GAANNNNTTC 1 cut(s) 857
XspI CTAG 7 cut(s) 1140, 1412, 1590, 1616, 2211, 2411, 3190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.