Rh2CG443700
ERF Family

Belongs to the protein kinase superfamily. Ser Thr protein kinase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Forward (+)
60068267 .. 60069571
1305 bp
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UTR
Exon/CDS
Intron
Rh2CG443700.1

Sequence Viewer

Length: 1305 bp
ATGTCTTCCTTCAATGTGGCATACAATGATCTTCAGGGACCTGTGCCATCTGGAGGTCAGTTTAATACTTTTACCAACTCGAGCTTTGAAGGGAATCCAGGATTATGTGGCCCTCAGACTGCACAGCACTCTTGCTCTCAATCAACAGCATCAGCACCAGTTCATAGTAGGAGGTCAAACAGAATCCTTCTGATTGGGCTTGCATCTTCTATTTGTTTTGGCATTGTTTTTATCATTGCAATGCTAGCTGTGTGGGTGTTGTCTAAGAGAAGAATTATTCCAGGTGGTGATTCTGACAAGATGGAATTGGATACAATCTCTAGCTATTCCACTGCTGCTGTTACTCCTGAGCTAGAGAAGGATACCAGCCTGGTCATCGTGTTCCCTACCAACACCAATGAAATCAAGGATCTTAATATATATGAAATCCTGAAAGCAACCAACAACTTCAATCAAGCAAACATCATTGGCTGTGGAGGTTTTGGTCTGGTATACAAGGCAACATTGGCAAATGGAACCAATCTGGCTGTTAAGAAACTCTCAGGAGACTTGGGTTTGATGGAAAGGGAGTTCAAGGCGGAGGTTGAGGCACTTTCCACTGCTCAACATGAGAACCTTGTTTCACTGCAAGGGTATTGCGTGCATGATGGTGTTCGTCTATTAATGTATTCCTACATGGAGAATGGAAGCTTGGATTTCTGGTTACATGAGAAACCTGATGGTGCTTCCCAATTAGATTGGCCAACACGGCTGAAGATTGCACGGGGAGCAGGGGCTGGATTGGCTTACATGCATCAGATATGTGAGCCACACATTGTGCATCGTGATATCAAGTCCAGCAACATCCTGCTGGATGATAAATTCAAAGCACATGTTGCTGATTTTGGGTTGTCCCGGTTGATTCTTCCATATGAGACTCATGTTACAACCGAGCTTGTTGGTACCCTTGGTTACATTCCTCCCGAGTATGGACAAGCATGGGTAGCCACTTTAAGAGGAGATATGTACAGTTTTGGTGTTGTCATGCTTGAGCTGCTCACTGGAAAAAGGCCGTTTGAGGTATGCAAACCAAGGTCATCGAGAGATTTGGTTGGTTGGGTACAGCAAATGAGGAAGGAGGGCAAAGCCGAGGAAGTTTTTGATCCTCTCCTGAGAGGGAAAGGCTTTGAAGAAGAGATATTGCAGGTGCTTGATGTAGCTTGCATGTGTGTCAACCAGAACCCTCTTAAGAGACCAACCATCAAAGAAGTTGTCGATTGGCTGGAAAATGTAGGGGCATCTCACCATGACTTGAATAAAGACTAG

Protein Analysis

434

Amino Acids

47.87

Weight (kDa)

5.78

Isoelectric Point (pI)

39.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 151 - 418 4.8e-39 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 153 - 419 1.5e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1174
Acc36I ACCTGC 1 cut(s) 1174
Acc65I GGTACC 1 cut(s) 941
AccB1I GGYRCC 1 cut(s) 941
AccI GTMKAC 1 cut(s) 492
AciI CCGC 1 cut(s) 578
AclWI GGATC 2 cut(s) 417, 1136
AcoI YGGCCR 1 cut(s) 740
AcsI RAATTY 1 cut(s) 860
AcuI CTGAAG 2 cut(s) 17, 773
AdeI CACNNNGTG 1 cut(s) 817
AfaI GTAC 3 cut(s) 943, 1007, 1101
AfiI CCNNNNNNNGG 2 cut(s) 53, 968
AflII CTTAAG 1 cut(s) 1226
AflIII ACRYGT 1 cut(s) 871
AgsI TTSAA 7 cut(s) 13, 89, 451, 574, 865, 1169, 1294
AjnI CCWGG 3 cut(s) 97, 280, 369
AjuI GAANNNNNNNTTGG 2 cut(s) 674, 706
AloI GAACNNNNNNTCC 2 cut(s) 554, 586
AluBI AGCT 8 cut(s) 84, 248, 324, 352, 690, 934, 1033, 1199
AluI AGCT 8 cut(s) 84, 248, 324, 352, 690, 934, 1033, 1199
Alw26I GTCTC 3 cut(s) 540, 908, 1225
AlwI GGATC 2 cut(s) 417, 1136
AlwNI CAGNNNCTG 1 cut(s) 776
Ama87I CYCGRG 2 cut(s) 79, 962
AoxI GGCC 3 cut(s) 109, 740, 1049
ApeKI GCWGC 2 cut(s) 335, 1033
ApoI RAATTY 1 cut(s) 860
ArsI GACNNNNNNTTYG 2 cut(s) 1236, 1268
AseI ATTAAT 1 cut(s) 662
Asp718I GGTACC 1 cut(s) 941
AspS9I GGNCC 2 cut(s) 38, 110
AsuC2I CCSGG 1 cut(s) 895
AsuHPI GGTGA 2 cut(s) 299, 1274
AsuNHI GCTAGC 1 cut(s) 244
AvaI CYCGRG 2 cut(s) 79, 962
AvaII GGWCC 1 cut(s) 38
BalI TGGCCA 1 cut(s) 742
BanI GGYRCC 1 cut(s) 941
BbvI GCAGC 2 cut(s) 322, 1020
BccI CCATC 6 cut(s) 55, 295, 553, 641, 713, 1247
BceAI ACGGC 2 cut(s) 764, 1036
BciT130I CCWGG 3 cut(s) 99, 282, 371
BciVI GTATCC 2 cut(s) 304, 355
BcnI CCSGG 1 cut(s) 895
BcoDI GTCTC 3 cut(s) 540, 908, 1225
BfaI CTAG 4 cut(s) 245, 321, 353, 1303
BfrI CTTAAG 1 cut(s) 1226
BfuAI ACCTGC 1 cut(s) 1174
BfuI GTATCC 2 cut(s) 304, 355
BglI GCCNNNNNGGC 1 cut(s) 748
BisI GCNGC 2 cut(s) 336, 1034
BlsI GCNGC 2 cut(s) 337, 1035
Bme1390I CCNGG 4 cut(s) 99, 282, 371, 895
Bme18I GGWCC 1 cut(s) 38
BmeT110I CYCGRG 2 cut(s) 79, 962
BmgT120I GGNCC 2 cut(s) 38, 110
BmiI GGNNCC 3 cut(s) 39, 517, 943
BmrFI CCNGG 4 cut(s) 99, 282, 371, 895
BmsI GCATC 5 cut(s) 158, 212, 802, 829, 1286
BmtI GCTAGC 1 cut(s) 248
BpmI CTGGAG 1 cut(s) 72
Bpu10I CCTNAGC 1 cut(s) 348
BpuEI CTTGAG 1 cut(s) 1049
BpuMI CCSGG 1 cut(s) 895
BsaI GGTCTC 1 cut(s) 1225
BsaJI CCNNGG 3 cut(s) 946, 1070, 1128
Bsc4I CCNNNNNNNGG 2 cut(s) 53, 968
Bse1I ACTGG 2 cut(s) 158, 1045
Bse3DI GCAATG 2 cut(s) 234, 246
BseBI CCWGG 3 cut(s) 99, 282, 371
BseDI CCNNGG 3 cut(s) 946, 1070, 1128
BseGI GGATG 2 cut(s) 843, 859
BseLI CCNNNNNNNGG 2 cut(s) 53, 968
BseMI GCAATG 2 cut(s) 234, 246
BseMII CTCAG 4 cut(s) 128, 339, 555, 1142
BseNI ACTGG 2 cut(s) 158, 1045
BseRI GAGGAG 1 cut(s) 1011
BseXI GCAGC 2 cut(s) 322, 1020
BsgI GTGCAG 1 cut(s) 105
BshFI GGCC 3 cut(s) 111, 742, 1051
BshNI GGYRCC 1 cut(s) 941
BsiHKCI CYCGRG 2 cut(s) 79, 962
BsiSI CCGG 1 cut(s) 895
BslFI GGGAC 2 cut(s) 51, 877
BslI CCNNNNNNNGG 2 cut(s) 53, 968
BsmAI GTCTC 3 cut(s) 540, 908, 1225
BsmFI GGGAC 2 cut(s) 51, 877
BsnI GGCC 3 cut(s) 111, 742, 1051
Bso31I GGTCTC 1 cut(s) 1225
BsoBI CYCGRG 2 cut(s) 79, 962
Bsp1407I TGTACA 1 cut(s) 1005
Bsp143I GATC 3 cut(s) 28, 409, 1141
BspACI CCGC 1 cut(s) 578
BspANI GGCC 3 cut(s) 111, 742, 1051
BspCNI CTCAG 4 cut(s) 127, 340, 554, 1143
BspLI GGNNCC 3 cut(s) 39, 517, 943
BspMI ACCTGC 1 cut(s) 1174
BspOI GCTAGC 1 cut(s) 248
BspPI GGATC 2 cut(s) 417, 1136
BspT107I GGYRCC 1 cut(s) 941
BspTI CTTAAG 1 cut(s) 1226
BspTNI GGTCTC 1 cut(s) 1225
BsrDI GCAATG 2 cut(s) 234, 246
BsrGI TGTACA 1 cut(s) 1005
BsrI ACTGG 2 cut(s) 158, 1045
BssECI CCNNGG 3 cut(s) 946, 1070, 1128
BssMI GATC 3 cut(s) 28, 409, 1141
BssNAI GTATAC 1 cut(s) 493
BssT1I CCWWGG 2 cut(s) 946, 1070
Bst1107I GTATAC 1 cut(s) 493
Bst2UI CCWGG 3 cut(s) 99, 282, 371
Bst4CI ACNGT 1 cut(s) 1010
Bst6I CTCTTC 1 cut(s) 1167
BstAFI CTTAAG 1 cut(s) 1226
BstAPI GCANNNNNTGC 1 cut(s) 875
BstAUI TGTACA 1 cut(s) 1005
BstC8I GCNNGC 4 cut(s) 201, 246, 641, 1201
BstDEI CTNAG 5 cut(s) 114, 264, 348, 541, 1151
BstF5I GGATG 2 cut(s) 843, 859
BstKTI GATC 3 cut(s) 31, 412, 1144
BstMAI GTCTC 3 cut(s) 540, 908, 1225
BstMBI GATC 3 cut(s) 28, 409, 1141
BstMWI GCNNNNNNNGC 8 cut(s) 245, 506, 748, 767, 782, 875, 983, 1033
BstNI CCWGG 3 cut(s) 99, 282, 371
BstNSI RCATGY 3 cut(s) 793, 875, 1207
BstSCI CCNGG 4 cut(s) 97, 280, 369, 893
BstV1I GCAGC 2 cut(s) 322, 1020
BstX2I RGATCY 1 cut(s) 409
BstYI RGATCY 1 cut(s) 409
BstZ17I GTATAC 1 cut(s) 493
BsuI GTATCC 2 cut(s) 304, 355
BsuRI GGCC 3 cut(s) 111, 742, 1051
BtsCI GGATG 2 cut(s) 843, 859
BtsI GCAGTG 3 cut(s) 330, 597, 623
BtsIMutI CAGTG 4 cut(s) 330, 597, 623, 1038
BveI ACCTGC 1 cut(s) 1174
Cac8I GCNNGC 4 cut(s) 201, 246, 641, 1201
CaiI CAGNNNCTG 1 cut(s) 776
Cfr13I GGNCC 2 cut(s) 38, 110
Csp6I GTAC 3 cut(s) 942, 1006, 1100
CviQI GTAC 3 cut(s) 942, 1006, 1100
DdeI CTNAG 5 cut(s) 114, 264, 348, 541, 1151
DpnI GATC 3 cut(s) 30, 411, 1143
DpnII GATC 3 cut(s) 28, 409, 1141
DraIII CACNNNGTG 1 cut(s) 817
EaeI YGGCCR 1 cut(s) 740
Eam1104I CTCTTC 1 cut(s) 1167
EarI CTCTTC 1 cut(s) 1167
EciI GGCGGA 1 cut(s) 593
Eco130I CCWWGG 2 cut(s) 946, 1070
Eco31I GGTCTC 1 cut(s) 1225
Eco32I GATATC 1 cut(s) 829
Eco47I GGWCC 1 cut(s) 38
Eco57I CTGAAG 2 cut(s) 17, 773
Eco88I CYCGRG 2 cut(s) 79, 962
EcoO109I RGGNCCY 1 cut(s) 38
EcoRII CCWGG 3 cut(s) 97, 280, 369
EcoRV GATATC 1 cut(s) 829
EcoT14I CCWWGG 2 cut(s) 946, 1070
EcoT22I ATGCAT 1 cut(s) 795
ErhI CCWWGG 2 cut(s) 946, 1070
FaqI GGGAC 2 cut(s) 51, 877
FauNDI CATATG 1 cut(s) 910
FblI GTMKAC 1 cut(s) 492
Fnu4HI GCNGC 2 cut(s) 336, 1034
FokI GGATG 2 cut(s) 830, 866
Fsp4HI GCNGC 2 cut(s) 336, 1034
FspBI CTAG 4 cut(s) 245, 321, 353, 1303
GluI GCNGC 2 cut(s) 336, 1034
GsuI CTGGAG 1 cut(s) 72
HaeIII GGCC 3 cut(s) 111, 742, 1051
HapII CCGG 1 cut(s) 895
HincII GTYRAC 1 cut(s) 1213
HindII GTYRAC 1 cut(s) 1213
HindIII AAGCTT 1 cut(s) 688
HinfI GANTC 5 cut(s) 94, 183, 290, 901, 916
HpaII CCGG 1 cut(s) 895
HphI GGTGA 2 cut(s) 299, 1274
Hpy166II GTNNAC 2 cut(s) 493, 1213
Hpy188I TCNGA 4 cut(s) 117, 192, 295, 798
Hpy188III TCNNGA 8 cut(s) 51, 347, 430, 543, 824, 962, 1080, 1150
Hpy8I GTNNAC 2 cut(s) 493, 1213
HpyAV CCTTC 5 cut(s) 19, 83, 197, 352, 1108
HpyCH4III ACNGT 1 cut(s) 1010
HpyF10VI GCNNNNNNNGC 8 cut(s) 245, 506, 748, 767, 782, 875, 983, 1033
HpyF3I CTNAG 5 cut(s) 114, 264, 348, 541, 1151
KpnI GGTACC 1 cut(s) 945
Kzo9I GATC 3 cut(s) 28, 409, 1141
LmnI GCTCC 1 cut(s) 767
Lsp1109I GCAGC 2 cut(s) 322, 1020
LweI GCATC 5 cut(s) 158, 212, 802, 829, 1286
MaeI CTAG 4 cut(s) 245, 321, 353, 1303
MaeIII GTNAC 4 cut(s) 340, 702, 922, 950
MalI GATC 3 cut(s) 30, 411, 1143
MboI GATC 3 cut(s) 28, 409, 1141
MboII GAAGA 7 cut(s) 23, 198, 282, 766, 896, 1181, 1184
MflI RGATCY 1 cut(s) 409
MlsI TGGCCA 1 cut(s) 742
MluCI AATT 4 cut(s) 273, 305, 731, 860
MluNI TGGCCA 1 cut(s) 742
MlyI GAGTC 1 cut(s) 910
Mox20I TGGCCA 1 cut(s) 742
Mph1103I ATGCAT 1 cut(s) 795
MscI TGGCCA 1 cut(s) 742
MseI TTAA 6 cut(s) 63, 414, 531, 662, 992, 1227
MslI CAYNNNNRTG 2 cut(s) 239, 648
Msp20I TGGCCA 1 cut(s) 742
MspCI CTTAAG 1 cut(s) 1226
MspI CCGG 1 cut(s) 895
MspR9I CCNGG 4 cut(s) 99, 282, 371, 895
MvaI CCWGG 3 cut(s) 99, 282, 371
MwoI GCNNNNNNNGC 8 cut(s) 245, 506, 748, 767, 782, 875, 983, 1033
NciI CCSGG 1 cut(s) 895
NdeI CATATG 1 cut(s) 910
NdeII GATC 3 cut(s) 28, 409, 1141
NheI GCTAGC 1 cut(s) 244
NlaIV GGNNCC 3 cut(s) 39, 517, 943
NmeAIII GCCGAG 1 cut(s) 1153
NsiI ATGCAT 1 cut(s) 795
NspI RCATGY 3 cut(s) 793, 875, 1207
PaeR7I CTCGAG 1 cut(s) 79
PaqCI CACCTGC 1 cut(s) 1174
PciI ACATGT 1 cut(s) 871
PfeI GAWTC 4 cut(s) 94, 183, 290, 901
PfoI TCCNGGA 1 cut(s) 97
PkrI GCNGC 2 cut(s) 337, 1035
PleI GAGTC 1 cut(s) 910
PpsI GAGTC 1 cut(s) 910
PpuMI RGGWCCY 1 cut(s) 38
PscI ACATGT 1 cut(s) 871
PshBI ATTAAT 1 cut(s) 662
Psp5II RGGWCCY 1 cut(s) 38
Psp6I CCWGG 3 cut(s) 97, 280, 369
PspGI CCWGG 3 cut(s) 97, 280, 369
PspN4I GGNNCC 3 cut(s) 39, 517, 943
PspPI GGNCC 2 cut(s) 38, 110
PspPPI RGGWCCY 1 cut(s) 38
PspXI VCTCGAGB 1 cut(s) 79
PstNI CAGNNNCTG 1 cut(s) 776
PsuI RGATCY 1 cut(s) 409
RsaI GTAC 3 cut(s) 943, 1007, 1101
RsaNI GTAC 3 cut(s) 942, 1006, 1100
RseI CAYNNNNRTG 2 cut(s) 239, 648
SaqAI TTAA 6 cut(s) 63, 414, 531, 662, 992, 1227
SatI GCNGC 2 cut(s) 336, 1034
Sau3AI GATC 3 cut(s) 28, 409, 1141
Sau96I GGNCC 2 cut(s) 38, 110
SchI GAGTC 1 cut(s) 910
ScrFI CCNGG 4 cut(s) 99, 282, 371, 895
SfaNI GCATC 5 cut(s) 158, 212, 802, 829, 1286
Sfr274I CTCGAG 1 cut(s) 79
SinI GGWCC 1 cut(s) 38
SlaI CTCGAG 1 cut(s) 79
SmiMI CAYNNNNRTG 2 cut(s) 239, 648
SmlI CTYRAG 3 cut(s) 79, 1028, 1226
SmoI CTYRAG 3 cut(s) 79, 1028, 1226
Sse9I AATT 4 cut(s) 273, 305, 731, 860
SsiI CCGC 1 cut(s) 578
SspMI CTAG 4 cut(s) 245, 321, 353, 1303
StyD4I CCNGG 4 cut(s) 97, 280, 369, 893
StyI CCWWGG 2 cut(s) 946, 1070
TaaI ACNGT 1 cut(s) 1010
TaqI TCGA 3 cut(s) 80, 1079, 1254
TasI AATT 4 cut(s) 273, 305, 731, 860
TatI WGTACW 1 cut(s) 1005
TfiI GAWTC 4 cut(s) 94, 183, 290, 901
Tru1I TTAA 6 cut(s) 63, 414, 531, 662, 992, 1227
Tru9I TTAA 6 cut(s) 63, 414, 531, 662, 992, 1227
TscAI CASTG 4 cut(s) 337, 604, 630, 1045
TseI GCWGC 2 cut(s) 335, 1033
TspDTI ATGAA 3 cut(s) 152, 414, 438
TspRI CASTG 4 cut(s) 337, 604, 630, 1045
Vha464I CTTAAG 1 cut(s) 1226
VpaK11BI GGWCC 1 cut(s) 38
VspI ATTAAT 1 cut(s) 662
XapI RAATTY 1 cut(s) 860
XceI RCATGY 3 cut(s) 793, 875, 1207
XhoI CTCGAG 1 cut(s) 79
XmiI GTMKAC 1 cut(s) 492
XspI CTAG 4 cut(s) 245, 321, 353, 1303
Zsp2I ATGCAT 1 cut(s) 795
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.