Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0001554

Physical Location & Seq

Genomic Coordinates Forward (+)

63180122 .. 63182363

Gene Structure 2242 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G038230.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

ATGAAGCCCAACAAAGTAATCTCCTCCAAGGATGAGAAGAAGGACATTCCAACAACACAGCTCATCTTCTTAGGTCAGTGGGTTTTTGTTCTGCTGTTTCTTCCTTGCTGTACCTCGGCTGCTTGTGATCAAGTGGTTCGCAACGCTCTCTTGTCCTTGGCATACAAGGTCTCATTACCATTGAACTGGTCGGCTGCCTCCGACTGCTGCTATTGGGAAGGAATAGTCTGTGGCCTTGATGATCGAGTCGTTCATCTCTGGCTGCCTGGGAGAGGCTTAAGAGGTTCAATCTCTCCAGCTATCACCAACCTCACATTTCTCACCCACCTCAATCTTTCCAACAATAGGCTGTTGGGTCTGCTCCCAGATAGATTGTTTTCCTCCCTCTTTCGCCTCCAAGTTCTAGACTTGAGCTTCAATCGTCTCAACGGCCACTTACCAATTTCATCTAATGAAGCTAGCAAGCTTCAGATTGTAGACTTGTCCAGCAATTACTTCAATGGAACAATCCCATCTTCGATCCTCATCCCATCCGTCGCTGCAGGCTCTCTCGCCACTTTCAATGTCAGCAATAACAGCTTTGCTGGCTCCATTCCCATCTCTGTTTTCTGCAAAAATGCAATCACAGCAACCTTACCATCTTGGACTTCTCCTTCCTACAAATTCAGTGAACCAATTTTCACCGGACTCGGCACTTGTTCGAAGCTCCAAGTCTTCCGGGCAGGCTTCAATAATCTGTCTGGCCCTCTCCCTGATGACATTTTCGACCTTGCTGATCTCCAACAGCTTTCTCTGCCTGTCAATCGCTTGTCAGGACACATTGGTGATGGCATTGTGCGTTTAACCAATCTGAAGCTGCTGGAGCTCTACTCGAACCAATTGGCGGGGCCAATACCAAGCCAAATTGGTAACCTTTGCAGGTTGGAAGAGCTAGCGCTCCACATCAACATCCTCACAGGTGCCTTGCCTGAATCTCTCAACAACTGCACAAATCTATCCACCTTGAATTTGCGGGTCAATTATATGGATGGAGAACTCTCTGCCTTCAACTTCTCTACACTCCAACGCCTCACCACACTCGACCTTGGCAACAACAACTTCGCTGGTGAGTTACCACAAAGCCTCTATTCTTGCAAGTCACTAACGGCAGTTAGATTCGCTAATAACCGGCTCATAGGCCAGATATCACCTGAAATAGGTGGACTAGAGTCCCTGGCTTTCCTATCCATCTCTAACAACTTCTTAAGCAATGCCGCTGGGGCTTTTAAAAATTTAAGGAGTTGTAAGAATCTGACCACTCTGGTGCTATCCAAGAGTTTTATGAATGAACCCTTGCCGGATGATGAAAGCCTAGTAGACTCTGGTGGATTTCAGAATATACAGGTTTTTGCCCTGGGTGGCTGCAATTTCACAGGTCAAGTTCCTCCCTGGTTTGGCAAGCTTAAGAAACTTGGAGTCTTGGACTTGTCAGTTAACCTCTTAACCGGTCCAATTCCCAGTTGGTTTGCTACTCTGCCTAGCCTTTTCTACATGGATTTGTCCAATAATAACCTTACTGGAGGATTTCCTAAGGAGCTCTGTGGGATGCCAGGTTTGACATCGAAAGAGGCCATCGATCTAGCGGACAGGAGTTATATAGAGTTGCCGGTCTTTGTGAATACCCAAGCTGCAACTAATCAGCAGTACAATCAGCTGTCCAGCCTCCCTCCAGCTATATATCTAGGTAATAACTGCCTTGGCGGCAATATCCCCACCGAGATAGGGCAATTGCAGTTCATTCTCGTGTTGGACCTTAGTCGCAACAGCTTCTCTGGTAGCATCCCTGATCAGATACGTTTTCTCACCAACTTAGAGAAATTGGATCTCTCCTATAACCATCTATCTGGTGAAATCCCTGCTTCTATCAAAAGTCTGCATTTCTTGTCTTCCTTCAGTGTGGCATACAATGATCTTCAGGGACTAGTACCATCTGGAGGTCAGTTTAATACTTTTACCAACTCCAGCTTTGAAGGGAATCCAGGATTATGTGGCCCTCCAATGTTGAGTCGTTCTTGCCTCGAAATGCCTCGGAGCCCTGGAGCAGTATTTCGGACAACTAATACTCACACATATGAGACAAAGAAGATTCTTATTGCACTTGTCTTTGGGATCTTTTTTGGCATTGGTTTTGGTATTGGTTTTACTATTGATGATGCAAAAATACCATTTCATGGTTGGTGTATGAACAAATTAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0001653 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006885 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0032502 GO:0032989 GO:0036211 GO:0038023 GO:0040007 GO:0042592 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045851 GO:0048589 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051716 GO:0055067 GO:0055080 GO:0060089 GO:0060560 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071944 GO:0098771 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

745

Amino Acids

81.0

Weight (kDa)

6.33

Isoelectric Point (pI)

37.22

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	249 - 344	7.5e-07	Leucine-rich repeat region
LRR_14	PF23598	353 - 517	7.1e-07	Leucine-rich repeat region
LRR_8	PF13855	460 - 518	6.6e-09	Leucine rich repeat
LRR_8	PF13855	487 - 533	1.6e-06	Leucine rich repeat
LRR_14	PF23598	559 - 646	1e-05	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001554)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17250 AT1G72300
fragaria_vesca	FvH4_6g35570 FvH4_6g35570 FvH4_6g35570 FvH4_6g36780 FvH4_6g36780 FvH4_6g36790 FvH4_6g36810
malus_domestica	MD02G1111300.v1.1 MD09G1166700.v1.1 MD09G1166900.v1.1 MD09G1171000.v1.1 MD17G1155900.v1.1 MD17G1156200.v1.1
prunus_persica	Prupe.3G024400_v2.0.a1 Prupe.3G024600_v2.0.a1 Prupe.3G024700_v2.0.a1 Prupe.3G029500_v2.0.a1
pyrus_communis	pycom09g08450 pycom17g14870 pycom17g14920
rosa_chinensis	RchiOBHm_Chr2g0147291 RchiOBHm_Chr2g0149181 RchiOBHm_Chr2g0149201
rosa_laevigata	RLG00000020249 RLG00000020378 RLG00000020379 RLG00000020380 RLG00000020381 RLG00000020382
rosa_multiflora	Rmu_co8376871.1_g000001 Rmu_sc0001615.1_g000001 Rmu_sc0001615.1_g000002 Rmu_sc0001880.1_g000001 Rmu_sc0008040.1_g000001
rosa_roxburghii	Rroxscaffold_2G00098330 Rroxscaffold_2G00098340 Rroxscaffold_2G00099610
rosa_rugosa	Rorug02G0399000 Rorug02G0409500 Rorug02G0409600 Rorug02G0409700
rosa_samantha	Rh2AG456100 Rh2BG468800 Rh2CG443700 Rh2DG478100
rosa_wichuraiana	Rw2G037320 Rw2G038220 Rw2G038230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	909
AccB1I	GGYRCC	1 cut(s)	959
AccB7I	CCANNNNNTGG	1 cut(s)	2210
AccI	GTMKAC	2 cut(s)	477, 1356
AciI	CCGC	5 cut(s)	884, 1012, 1254, 1622, 1740
AclWI	GGATC	3 cut(s)	514, 1869, 2156
AcoI	YGGCCR	1 cut(s)	430
AcsI	RAATTY	3 cut(s)	662, 1006, 1270
AcuI	CTGAAG	4 cut(s)	452, 872, 1915, 1937
AfaI	GTAC	3 cut(s)	112, 1685, 1965
AfeI	AGCGCT	1 cut(s)	936
AfiI	CCNNNNNNNGG	8 cut(s)	272, 345, 883, 1196, 1433, 1761, 1973, 2210
AflII	CTTAAG	3 cut(s)	277, 1243, 1442
AgeI	ACCGGT	1 cut(s)	1484
AgsI	TTSAA	9 cut(s)	184, 288, 418, 499, 562, 730, 1006, 1048, 2009
AhlI	ACTAGT	1 cut(s)	1960
AjnI	CCWGG	7 cut(s)	265, 1212, 1392, 1427, 1588, 2017, 2074
AleI	CACNNNNGTG	2 cut(s)	822, 1301
Alw21I	GWGCWC	2 cut(s)	867, 1578
Alw26I	GTCTC	3 cut(s)	175, 428, 2108
AlwI	GGATC	3 cut(s)	514, 1869, 2156
Aor51HI	AGCGCT	1 cut(s)	936
AoxI	GGCC	7 cut(s)	232, 430, 742, 887, 1177, 1608, 2029
ApeKI	GCWGC	8 cut(s)	119, 194, 207, 262, 539, 856, 1401, 1667
ApoI	RAATTY	3 cut(s)	662, 1006, 1270
AseI	ATTAAT	1 cut(s)	2231
AsiGI	ACCGGT	1 cut(s)	1484
AspLEI	GCGC	1 cut(s)	937
AspS9I	GGNCC	5 cut(s)	743, 887, 1487, 1789, 2030
AsuC2I	CCSGG	1 cut(s)	719
AsuHPI	GGTGA	9 cut(s)	295, 313, 673, 836, 1063, 1118, 1179, 1834, 1898
AsuII	TTCGAA	1 cut(s)	701
AsuNHI	GCTAGC	2 cut(s)	458, 931
AvaII	GGWCC	2 cut(s)	1487, 1789
AxyI	CCTNAGG	1 cut(s)	1569
BanI	GGYRCC	1 cut(s)	959
BanII	GRGCYC	3 cut(s)	867, 1578, 2075
BauI	CACGAG	1 cut(s)	1781
BbsI	GAAGAC	2 cut(s)	706, 1917
Bbv12I	GWGCWC	2 cut(s)	867, 1578
BbvI	GCAGC	8 cut(s)	106, 181, 194, 249, 526, 843, 1388, 1654
BceAI	ACGGC	2 cut(s)	445, 1161
BciT130I	CCWGG	7 cut(s)	267, 1214, 1394, 1429, 1590, 2019, 2076
BclI	TGATCA	2 cut(s)	127, 1825
BcnI	CCSGG	1 cut(s)	719
BcoDI	GTCTC	3 cut(s)	175, 428, 2108
BcuI	ACTAGT	1 cut(s)	1960
BfaI	CTAG	9 cut(s)	404, 459, 932, 1205, 1352, 1518, 1619, 1721, 1961
BfmI	CTRYAG	1 cut(s)	540
BfoI	RGCGCY	1 cut(s)	938
BfrI	CTTAAG	3 cut(s)	277, 1243, 1442
BfuAI	ACCTGC	1 cut(s)	909
BglI	GCCNNNNNGGC	2 cut(s)	1259, 1740
Bme1390I	CCNGG	8 cut(s)	267, 719, 1214, 1394, 1429, 1590, 2019, 2076
Bme18I	GGWCC	2 cut(s)	1487, 1789
BmgT120I	GGNCC	5 cut(s)	743, 887, 1487, 1789, 2030
BmiI	GGNNCC	4 cut(s)	589, 888, 961, 2072
BmrFI	CCNGG	8 cut(s)	267, 719, 1214, 1394, 1429, 1590, 2019, 2076
BmrI	ACTGGG	1 cut(s)	1491
BmsI	GCATC	3 cut(s)	1575, 1827, 2182
BmtI	GCTAGC	2 cut(s)	462, 935
BmuI	ACTGGG	1 cut(s)	1491
BoxI	GACNNNNGTC	2 cut(s)	1207, 1794
BpiI	GAAGAC	2 cut(s)	706, 1917
BplI	GAGNNNNNCTC	2 cut(s)	854, 886
BpmI	CTGGAG	7 cut(s)	279, 881, 1578, 1692, 1984, 1992, 2097
Bpu14I	TTCGAA	1 cut(s)	701
BpuEI	CTTGAG	1 cut(s)	430
BpuMI	CCSGG	1 cut(s)	719
Bsa29I	ATCGAT	1 cut(s)	1614
BsaBI	GATNNNNATC	1 cut(s)	524
BsaI	GGTCTC	1 cut(s)	175
BsaWI	WCCGGW	2 cut(s)	683, 1484
Bsc4I	CCNNNNNNNGG	8 cut(s)	272, 345, 883, 1196, 1433, 1761, 1973, 2210
Bse118I	RCCGGY	3 cut(s)	1167, 1484, 1645
Bse1I	ACTGG	3 cut(s)	191, 1497, 1561
Bse21I	CCTNAGG	1 cut(s)	1569
Bse3DI	GCAATG	1 cut(s)	1255
Bse8I	GATNNNNATC	1 cut(s)	524
BseBI	CCWGG	7 cut(s)	267, 1214, 1394, 1429, 1590, 2019, 2076
BseCI	ATCGAT	1 cut(s)	1614
BseGI	GGATG	8 cut(s)	37, 525, 530, 948, 1033, 1345, 1590, 1818
BseJI	GATNNNNATC	1 cut(s)	524
BseLI	CCNNNNNNNGG	8 cut(s)	272, 345, 883, 1196, 1433, 1761, 1973, 2210
BseMI	GCAATG	1 cut(s)	1255
BseNI	ACTGG	3 cut(s)	191, 1497, 1561
BseRI	GAGGAG	1 cut(s)	13
BseXI	GCAGC	8 cut(s)	106, 181, 194, 249, 526, 843, 1388, 1654
BseYI	CCCAGC	1 cut(s)	1256
BsgI	GTGCAG	1 cut(s)	970
BshFI	GGCC	7 cut(s)	234, 432, 744, 889, 1179, 1610, 2031
BshNI	GGYRCC	1 cut(s)	959
BshTI	ACCGGT	1 cut(s)	1484
BshVI	ATCGAT	1 cut(s)	1614
BsiHKAI	GWGCWC	2 cut(s)	867, 1578
BsiSI	CCGG	6 cut(s)	684, 718, 1168, 1337, 1485, 1646
BslFI	GGGAC	2 cut(s)	1195, 1971
BslI	CCNNNNNNNGG	8 cut(s)	272, 345, 883, 1196, 1433, 1761, 1973, 2210
BsmAI	GTCTC	3 cut(s)	175, 428, 2108
BsmBI	CGTCTC	1 cut(s)	428
BsmFI	GGGAC	2 cut(s)	1195, 1971
BsnI	GGCC	7 cut(s)	234, 432, 744, 889, 1179, 1610, 2031
Bso31I	GGTCTC	1 cut(s)	175
Bsp119I	TTCGAA	1 cut(s)	701
Bsp1286I	GDGCHC	3 cut(s)	867, 1578, 2075
Bsp143I	GATC	9 cut(s)	127, 241, 519, 775, 1615, 1825, 1861, 1948, 2148
BspACI	CCGC	5 cut(s)	884, 1012, 1254, 1622, 1740
BspANI	GGCC	7 cut(s)	234, 432, 744, 889, 1179, 1610, 2031
BspDI	ATCGAT	1 cut(s)	1614
BspLI	GGNNCC	4 cut(s)	589, 888, 961, 2072
BspMAI	CTGCAG	1 cut(s)	544
BspMI	ACCTGC	1 cut(s)	909
BspOI	GCTAGC	2 cut(s)	462, 935
BspPI	GGATC	3 cut(s)	514, 1869, 2156
BspQI	GCTCTTC	1 cut(s)	921
BspT104I	TTCGAA	1 cut(s)	701
BspT107I	GGYRCC	1 cut(s)	959
BspTI	CTTAAG	3 cut(s)	277, 1243, 1442
BspTNI	GGTCTC	1 cut(s)	175
BsrDI	GCAATG	1 cut(s)	1255
BsrFI	RCCGGY	3 cut(s)	1167, 1484, 1645
BsrI	ACTGG	3 cut(s)	191, 1497, 1561
BssAI	RCCGGY	3 cut(s)	1167, 1484, 1645
BssMI	GATC	9 cut(s)	127, 241, 519, 775, 1615, 1825, 1861, 1948, 2148
BssSI	CACGAG	1 cut(s)	1781
BssT1I	CCWWGG	4 cut(s)	27, 156, 1084, 1735
Bst2BI	CACGAG	1 cut(s)	1781
Bst2UI	CCWGG	7 cut(s)	267, 1214, 1394, 1429, 1590, 2019, 2076
Bst6I	CTCTTC	1 cut(s)	921
BstAFI	CTTAAG	3 cut(s)	277, 1243, 1442
BstBI	TTCGAA	1 cut(s)	701
BstC8I	GCNNGC	7 cut(s)	460, 464, 544, 586, 724, 933, 1439
BstDEI	CTNAG	4 cut(s)	70, 1569, 1793, 1849
BstEII	GGTNACC	1 cut(s)	908
BstENI	CCTNNNNNAGG	2 cut(s)	270, 1194
BstF5I	GGATG	8 cut(s)	37, 525, 530, 948, 1033, 1345, 1590, 1818
BstH2I	RGCGCY	1 cut(s)	938
BstHHI	GCGC	1 cut(s)	937
BstKTI	GATC	9 cut(s)	130, 244, 522, 778, 1618, 1828, 1864, 1951, 2151
BstMAI	GTCTC	3 cut(s)	175, 428, 2108
BstMBI	GATC	9 cut(s)	127, 241, 519, 775, 1615, 1825, 1861, 1948, 2148
BstMWI	GCNNNNNNNGC	7 cut(s)	576, 585, 626, 793, 862, 1259, 1740
BstNI	CCWGG	7 cut(s)	267, 1214, 1394, 1429, 1590, 2019, 2076
BstPAI	GACNNNNGTC	2 cut(s)	1207, 1794
BstPI	GGTNACC	1 cut(s)	908
BstSCI	CCNGG	8 cut(s)	265, 717, 1212, 1392, 1427, 1588, 2017, 2074
BstSFI	CTRYAG	1 cut(s)	540
BstV1I	GCAGC	8 cut(s)	106, 181, 194, 249, 526, 843, 1388, 1654
BstV2I	GAAGAC	2 cut(s)	706, 1917
BstX2I	RGATCY	2 cut(s)	1861, 2148
BstXI	CCANNNNNNTGG	2 cut(s)	186, 1883
BstYI	RGATCY	2 cut(s)	1861, 2148
Bsu15I	ATCGAT	1 cut(s)	1614
Bsu36I	CCTNAGG	1 cut(s)	1569
BsuRI	GGCC	7 cut(s)	234, 432, 744, 889, 1179, 1610, 2031
BsuTUI	ATCGAT	1 cut(s)	1614
BtsCI	GGATG	8 cut(s)	37, 525, 530, 948, 1033, 1345, 1590, 1818
BtsIMutI	CAGTG	3 cut(s)	83, 673, 1939
BveI	ACCTGC	1 cut(s)	909
Cac8I	GCNNGC	7 cut(s)	460, 464, 544, 586, 724, 933, 1439
CfoI	GCGC	1 cut(s)	937
Cfr10I	RCCGGY	3 cut(s)	1167, 1484, 1645
Cfr13I	GGNCC	5 cut(s)	743, 887, 1487, 1789, 2030
ClaI	ATCGAT	1 cut(s)	1614
Csp6I	GTAC	3 cut(s)	111, 1684, 1964
CspAI	ACCGGT	1 cut(s)	1484
CviAII	CATG	2 cut(s)	1531, 2210
CviQI	GTAC	3 cut(s)	111, 1684, 1964
DdeI	CTNAG	4 cut(s)	70, 1569, 1793, 1849
DpnI	GATC	9 cut(s)	129, 243, 521, 777, 1617, 1827, 1863, 1950, 2150
DpnII	GATC	9 cut(s)	127, 241, 519, 775, 1615, 1825, 1861, 1948, 2148
DraI	TTTAAA	1 cut(s)	1267
EaeI	YGGCCR	1 cut(s)	430
Eam1104I	CTCTTC	1 cut(s)	921
EarI	CTCTTC	1 cut(s)	921
Ecl136II	GAGCTC	2 cut(s)	865, 1576
Eco130I	CCWWGG	4 cut(s)	27, 156, 1084, 1735
Eco24I	GRGCYC	3 cut(s)	867, 1578, 2075
Eco31I	GGTCTC	1 cut(s)	175
Eco32I	GATATC	1 cut(s)	1185
Eco47I	GGWCC	2 cut(s)	1487, 1789
Eco47III	AGCGCT	1 cut(s)	936
Eco53kI	GAGCTC	2 cut(s)	865, 1576
Eco57I	CTGAAG	4 cut(s)	452, 872, 1915, 1937
Eco81I	CCTNAGG	1 cut(s)	1569
Eco91I	GGTNACC	1 cut(s)	908
EcoICRI	GAGCTC	2 cut(s)	865, 1576
EcoNI	CCTNNNNNAGG	2 cut(s)	270, 1194
EcoO65I	GGTNACC	1 cut(s)	908
EcoRII	CCWGG	7 cut(s)	265, 1212, 1392, 1427, 1588, 2017, 2074
EcoRV	GATATC	1 cut(s)	1185
EcoT14I	CCWWGG	4 cut(s)	27, 156, 1084, 1735
EcoT38I	GRGCYC	3 cut(s)	867, 1578, 2075
ErhI	CCWWGG	4 cut(s)	27, 156, 1084, 1735
Esp3I	CGTCTC	1 cut(s)	428
FaeI	CATG	2 cut(s)	1534, 2213
FaqI	GGGAC	2 cut(s)	1195, 1971
FatI	CATG	2 cut(s)	1530, 2209
FauI	CCCGC	2 cut(s)	877, 1005
FauNDI	CATATG	1 cut(s)	2110
FbaI	TGATCA	2 cut(s)	127, 1825
FblI	GTMKAC	2 cut(s)	477, 1356
FokI	GGATG	8 cut(s)	44, 512, 517, 935, 1040, 1352, 1597, 1805
FriOI	GRGCYC	3 cut(s)	867, 1578, 2075
FspBI	CTAG	9 cut(s)	404, 459, 932, 1205, 1352, 1518, 1619, 1721, 1961
GlaI	GCGC	1 cut(s)	936
GsaI	CCCAGC	1 cut(s)	1260
GsuI	CTGGAG	7 cut(s)	279, 881, 1578, 1692, 1984, 1992, 2097
HaeII	RGCGCY	1 cut(s)	938
HaeIII	GGCC	7 cut(s)	234, 432, 744, 889, 1179, 1610, 2031
HapII	CCGG	6 cut(s)	684, 718, 1168, 1337, 1485, 1646
HhaI	GCGC	1 cut(s)	937
Hin1II	CATG	2 cut(s)	1534, 2213
Hin6I	GCGC	1 cut(s)	935
HinP1I	GCGC	1 cut(s)	935
HincII	GTYRAC	1 cut(s)	1474
HindII	GTYRAC	1 cut(s)	1474
HindIII	AAGCTT	2 cut(s)	464, 1439
HpaI	GTTAAC	1 cut(s)	1474
HpaII	CCGG	6 cut(s)	684, 718, 1168, 1337, 1485, 1646
HphI	GGTGA	9 cut(s)	295, 313, 673, 836, 1063, 1118, 1179, 1834, 1898
Hpy166II	GTNNAC	5 cut(s)	478, 671, 1202, 1357, 1474
Hpy188I	TCNGA	8 cut(s)	202, 471, 852, 1293, 1374, 1830, 2070, 2091
Hpy188III	TCNNGA	3 cut(s)	404, 813, 1971
Hpy8I	GTNNAC	5 cut(s)	478, 671, 1202, 1357, 1474
Hpy99I	CGWCG	1 cut(s)	539
HpyAV	CCTTC	6 cut(s)	34, 212, 663, 1054, 1939, 2003
HpyCH4IV	ACGT	1 cut(s)	1834
HpyF10VI	GCNNNNNNNGC	7 cut(s)	576, 585, 626, 793, 862, 1259, 1740
HpyF3I	CTNAG	4 cut(s)	70, 1569, 1793, 1849
HpySE526I	ACGT	1 cut(s)	1834
Hsp92II	CATG	2 cut(s)	1534, 2213
HspAI	GCGC	1 cut(s)	935
Ksp22I	TGATCA	2 cut(s)	127, 1825
KspAI	GTTAAC	1 cut(s)	1474
Kzo9I	GATC	9 cut(s)	127, 241, 519, 775, 1615, 1825, 1861, 1948, 2148
LguI	GCTCTTC	1 cut(s)	921
LmnI	GCTCC	8 cut(s)	366, 593, 711, 862, 942, 1573, 2070, 2078
Lsp1109I	GCAGC	8 cut(s)	106, 181, 194, 249, 526, 843, 1388, 1654
LweI	GCATC	3 cut(s)	1575, 1827, 2182
MaeI	CTAG	9 cut(s)	404, 459, 932, 1205, 1352, 1518, 1619, 1721, 1961
MaeII	ACGT	1 cut(s)	1834
MaeIII	GTNAC	3 cut(s)	908, 1110, 1137
MalI	GATC	9 cut(s)	129, 243, 521, 777, 1617, 1827, 1863, 1950, 2150
MboI	GATC	9 cut(s)	127, 241, 519, 775, 1615, 1825, 1861, 1948, 2148
MboII	GAAGA	9 cut(s)	49, 58, 92, 507, 706, 938, 1917, 1943, 2134
MfeI	CAATTG	2 cut(s)	878, 1766
MflI	RGATCY	2 cut(s)	1861, 2148
MhlI	GDGCHC	3 cut(s)	867, 1578, 2075
MlyI	GAGTC	6 cut(s)	255, 681, 1217, 1352, 1464, 2053
MmeI	TCCRAC	7 cut(s)	74, 225, 363, 805, 903, 1087, 1767
MslI	CAYNNNNRTG	4 cut(s)	822, 1301, 1781, 2109
MspA1I	CMGCKG	2 cut(s)	1256, 1693
MspCI	CTTAAG	3 cut(s)	277, 1243, 1442
MspI	CCGG	6 cut(s)	684, 718, 1168, 1337, 1485, 1646
MspR9I	CCNGG	8 cut(s)	267, 719, 1214, 1394, 1429, 1590, 2019, 2076
MunI	CAATTG	2 cut(s)	878, 1766
MvaI	CCWGG	7 cut(s)	267, 1214, 1394, 1429, 1590, 2019, 2076
MwoI	GCNNNNNNNGC	7 cut(s)	576, 585, 626, 793, 862, 1259, 1740
NciI	CCSGG	1 cut(s)	719
NdeI	CATATG	1 cut(s)	2110
NdeII	GATC	9 cut(s)	127, 241, 519, 775, 1615, 1825, 1861, 1948, 2148
NheI	GCTAGC	2 cut(s)	458, 931
NlaIII	CATG	2 cut(s)	1534, 2213
NlaIV	GGNNCC	4 cut(s)	589, 888, 961, 2072
NmeAIII	GCCGAG	2 cut(s)	95, 669
NmuCI	GTSAC	1 cut(s)	1137
NspV	TTCGAA	1 cut(s)	701
OliI	CACNNNNGTG	2 cut(s)	822, 1301
PasI	CCCWGGG	1 cut(s)	1393
PciSI	GCTCTTC	1 cut(s)	921
PfeI	GAWTC	5 cut(s)	971, 1155, 1288, 2014, 2125
PflMI	CCANNNNNTGG	1 cut(s)	2210
PfoI	TCCNGGA	1 cut(s)	2017
PinAI	ACCGGT	1 cut(s)	1484
PleI	GAGTC	6 cut(s)	254, 681, 1216, 1352, 1463, 2052
PpsI	GAGTC	6 cut(s)	254, 681, 1216, 1352, 1463, 2052
PshAI	GACNNNNGTC	2 cut(s)	1207, 1794
PshBI	ATTAAT	1 cut(s)	2231
Psp124BI	GAGCTC	2 cut(s)	867, 1578
Psp6I	CCWGG	7 cut(s)	265, 1212, 1392, 1427, 1588, 2017, 2074
PspEI	GGTNACC	1 cut(s)	908
PspFI	CCCAGC	1 cut(s)	1256
PspGI	CCWGG	7 cut(s)	265, 1212, 1392, 1427, 1588, 2017, 2074
PspN4I	GGNNCC	4 cut(s)	589, 888, 961, 2072
PspPI	GGNCC	5 cut(s)	743, 887, 1487, 1789, 2030
PstI	CTGCAG	1 cut(s)	544
PsuI	RGATCY	2 cut(s)	1861, 2148
PvuII	CAGCTG	1 cut(s)	1693
RsaI	GTAC	3 cut(s)	112, 1685, 1965
RsaNI	GTAC	3 cut(s)	111, 1684, 1964
RseI	CAYNNNNRTG	4 cut(s)	822, 1301, 1781, 2109
SacI	GAGCTC	2 cut(s)	867, 1578
SapI	GCTCTTC	1 cut(s)	921
Sau3AI	GATC	9 cut(s)	127, 241, 519, 775, 1615, 1825, 1861, 1948, 2148
Sau96I	GGNCC	5 cut(s)	743, 887, 1487, 1789, 2030
SchI	GAGTC	6 cut(s)	255, 681, 1217, 1352, 1464, 2053
ScrFI	CCNGG	8 cut(s)	267, 719, 1214, 1394, 1429, 1590, 2019, 2076
SduI	GDGCHC	3 cut(s)	867, 1578, 2075
SfaNI	GCATC	3 cut(s)	1575, 1827, 2182
SfcI	CTRYAG	1 cut(s)	540
SfuI	TTCGAA	1 cut(s)	701
SinI	GGWCC	2 cut(s)	1487, 1789
SmiMI	CAYNNNNRTG	4 cut(s)	822, 1301, 1781, 2109
SmlI	CTYRAG	4 cut(s)	277, 409, 1243, 1442
SmoI	CTYRAG	4 cut(s)	277, 409, 1243, 1442
SpeI	ACTAGT	1 cut(s)	1960
SsiI	CCGC	5 cut(s)	884, 1012, 1254, 1622, 1740
SspMI	CTAG	9 cut(s)	404, 459, 932, 1205, 1352, 1518, 1619, 1721, 1961
SstI	GAGCTC	2 cut(s)	867, 1578
StyD4I	CCNGG	8 cut(s)	265, 717, 1212, 1392, 1427, 1588, 2017, 2074
StyI	CCWWGG	4 cut(s)	27, 156, 1084, 1735
TaiI	ACGT	1 cut(s)	1837
TaqI	TCGA	9 cut(s)	244, 518, 701, 765, 872, 1080, 1601, 1614, 2058
TatI	WGTACW	1 cut(s)	1683
TauI	GCSGC	2 cut(s)	1256, 1743
TfiI	GAWTC	5 cut(s)	971, 1155, 1288, 2014, 2125
TscAI	CASTG	3 cut(s)	83, 673, 1939
TseFI	GTSAC	1 cut(s)	1137
TseI	GCWGC	8 cut(s)	119, 194, 207, 262, 539, 856, 1401, 1667
Tsp45I	GTSAC	1 cut(s)	1137
TspGWI	ACGGA	1 cut(s)	523
TspRI	CASTG	3 cut(s)	83, 673, 1939
Van91I	CCANNNNNTGG	1 cut(s)	2210
Vha464I	CTTAAG	3 cut(s)	277, 1243, 1442
VpaK11BI	GGWCC	2 cut(s)	1487, 1789
VspI	ATTAAT	1 cut(s)	2231
XagI	CCTNNNNNAGG	2 cut(s)	270, 1194
XapI	RAATTY	3 cut(s)	662, 1006, 1270
XbaI	TCTAGA	1 cut(s)	403
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1497, 2211
XmiI	GTMKAC	2 cut(s)	477, 1356
XspI	CTAG	9 cut(s)	404, 459, 932, 1205, 1352, 1518, 1619, 1721, 1961

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.