Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008040.1

Orthogroup ID

OG0001554

Physical Location & Seq

Genomic Coordinates Reverse (-)

956 .. 3103

Gene Structure 2148 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008040.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2148 bp

atgaaacccaacaaagtaaccttttccaaggacatgaagaatgatgtcccaacaacattgctaatctttctgtgtcagtgggttttcattatgttgttgctcccttcctgtgcctctgcttcttgtgatcgagtggatcgtgacgctctcttatccttagatttcaaggcctcatcaccattgaattggtctgcttcctcggactgttgcctttgggaaggaatactctgtggtccagatgatcgagtcctccatctatggttgcctgggagaggcttaagcggttcagtctccccagctatcaccaacctcacatatctcacccacctcaatctttcccagaataccctgttgggtgtacttccagatggcttgttttcctccctctttcacctccaagttctagacttgagtttcaatcgtctcaacggccacttaccaatttcatctaatgaagccagcaagcttcagattgtagacttgtccagcaattacttcaatggaacattcccatctgtgacttcaggctctctaaccattttcaatgtcagcaaaaacagctttgctggctccattcccatctctgttttctgcaaaaatggcagcaatcacaacaacctcacctttgtggacttatccttcaacagatttactgatccaattcctactggactcgcctcttgttccaagctccaggtcttccgcgcaggcttcaatgctctctctggtcatctccctgatgatatttttggccttgctgatctccaacagctttctctgccggtcaatcgcttatcaggacccattggcaatggcattgtaggtttaaccaatctgaagatcctggagctcaactcaaaccaattcgtggggaatatacccagcgaaattggtaaccttgtcaggttggagaagctggtcctccacagcaacaacctcacaggtgccatacctccatctcttaacaactgcacaaatctgtccaccttgaatttgcgggtcaacaacttaacaggagagctctccgccttcaatttctctacgttccaactcctcaccacacttgaccttggcaacaataacttcactggtaagttaccgcaaagcctctactcgtgcaagtcactgacagcaattagattggccagcaataatctccaagggcagatattacccgaaatagttgcactagaatcccttgctttcctctccatctctaacaacaacttaaccaatgccaccggggcctttatggttctaatgggttgcaagaatctcaccactctggtcctcaccaagagttttctgttggaacctttgccaaatgatgaaagcctagcagacctagatggatttcacaaactccaagttcttgctatgggtggttgcaagtttacaggtcaagtgcccacctggatagccaagcttaaaagccttcaagtcttggacctggcatttaaccttataaccggctctattccaggttggttgggtagtctacccaagctattctacatggacttgtccaataatcttcttacgggaggattccctgaggagctctgcaggatgccatctttgacatcaaaagaggccgatgataaagtggaaagaagttatctagagttaccagtttctgtgatgtccagaaatggtactaatcagcaatacaatcacttctctcaactccccctaacactatgtcttggttggaatagcctcagtggaaatatccctattgagattggccaattgaagtttcttcatgagttggatcttagccataataacttctctggcagcatcccagttcagatttcgaatctatctaacctagagaaattggatctctcctataaccgtctatctggcgcaatccctgcttcccttacagctctgaatttcctttctttcttcagtattgcatacaatgatcttcagggtgttgtaccatctggaggccagttcagtacttttaccatctccagttttgaaggaaatccacgattatgtggctatcaaactgcacaggaatcttgctctctaagtcctccaagccctcctgtgtttgcaggtactcagagatcttccaacaagattccaagtgcactcatctttgggatcactttcagcattttcttggtttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000902 GO:0001653 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004888 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006885 GO:0007154 GO:0007165 GO:0008150 GO:0008152 GO:0009653 GO:0009826 GO:0009987 GO:0016020 GO:0016043 GO:0016049 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0023052 GO:0032502 GO:0032989 GO:0036211 GO:0038023 GO:0040007 GO:0042592 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0045851 GO:0048589 GO:0048856 GO:0048869 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051716 GO:0055067 GO:0055080 GO:0060089 GO:0060560 GO:0065007 GO:0065008 GO:0071704 GO:0071840 GO:0071944 GO:0098771 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase Pkinase_Tyr

Protein Analysis

715

Amino Acids

77.5

Weight (kDa)

6.01

Isoelectric Point (pI)

34.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001554)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17250 AT1G72300
fragaria_vesca	FvH4_6g35570 FvH4_6g35570 FvH4_6g35570 FvH4_6g36780 FvH4_6g36780 FvH4_6g36790 FvH4_6g36810
malus_domestica	MD02G1111300.v1.1 MD09G1166700.v1.1 MD09G1166900.v1.1 MD09G1171000.v1.1 MD17G1155900.v1.1 MD17G1156200.v1.1
prunus_persica	Prupe.3G024400_v2.0.a1 Prupe.3G024600_v2.0.a1 Prupe.3G024700_v2.0.a1 Prupe.3G029500_v2.0.a1
pyrus_communis	pycom09g08450 pycom17g14870 pycom17g14920
rosa_chinensis	RchiOBHm_Chr2g0147291 RchiOBHm_Chr2g0149181 RchiOBHm_Chr2g0149201
rosa_laevigata	RLG00000020249 RLG00000020378 RLG00000020379 RLG00000020380 RLG00000020381 RLG00000020382
rosa_multiflora	Rmu_co8376871.1_g000001 Rmu_sc0001615.1_g000001 Rmu_sc0001615.1_g000002 Rmu_sc0001880.1_g000001 Rmu_sc0008040.1_g000001
rosa_roxburghii	Rroxscaffold_2G00098330 Rroxscaffold_2G00098340 Rroxscaffold_2G00099610
rosa_rugosa	Rorug02G0399000 Rorug02G0409500 Rorug02G0409600 Rorug02G0409700
rosa_samantha	Rh2AG456100 Rh2BG468800 Rh2CG443700 Rh2DG478100
rosa_wichuraiana	Rw2G037320 Rw2G038220 Rw2G038230

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1466
Acc36I	ACCTGC	1 cut(s)	2063
AccB1I	GGYRCC	1 cut(s)	944
AccB7I	CCANNNNNTGG	1 cut(s)	868
AccI	GTMKAC	2 cut(s)	477, 1498
AccII	CGCG	1 cut(s)	705
AciI	CCGC	5 cut(s)	282, 703, 997, 1026, 1100
AclWI	GGATC	6 cut(s)	144, 650, 835, 1782, 1854, 2129
AcoI	YGGCCR	3 cut(s)	430, 1143, 1747
AcsI	RAATTY	2 cut(s)	991, 1900
AcuI	CTGAAG	5 cut(s)	452, 507, 857, 1900, 1922
AfaI	GTAC	5 cut(s)	360, 1657, 1950, 1972, 2077
AfiI	CCNNNNNNNGG	3 cut(s)	272, 868, 1958
AflII	CTTAAG	1 cut(s)	277
AjnI	CCWGG	6 cut(s)	265, 693, 843, 1412, 1449, 1480
AjuI	GAANNNNNNNTTGG	4 cut(s)	335, 367, 1743, 1775
AleI	CACNNNNGTG	1 cut(s)	626
Alw21I	GWGCWC	4 cut(s)	852, 1023, 1563, 2110
Alw26I	GTCTC	2 cut(s)	295, 428
Alw44I	GTGCAC	1 cut(s)	2106
AlwI	GGATC	6 cut(s)	144, 650, 835, 1782, 1854, 2129
AlwNI	CAGNNNCTG	1 cut(s)	1637
AoxI	GGCC	8 cut(s)	168, 430, 751, 1143, 1245, 1593, 1747, 1960
ApaLI	GTGCAC	1 cut(s)	2106
ApeKI	GCWGC	2 cut(s)	603, 1800
ApoI	RAATTY	2 cut(s)	991, 1900
AspLEI	GCGC	2 cut(s)	707, 1874
AspS9I	GGNCC	6 cut(s)	233, 800, 919, 1245, 1288, 1447
AsuC2I	CCSGG	1 cut(s)	1243
AsuHPI	GGTGA	8 cut(s)	168, 295, 313, 383, 613, 1048, 1270, 1285
AsuII	TTCGAA	1 cut(s)	1820
AvaII	GGWCC	5 cut(s)	233, 800, 919, 1288, 1447
AxyI	CCTNAGG	1 cut(s)	1554
BaeGI	GKGCMC	2 cut(s)	1410, 2110
BalI	TGGCCA	2 cut(s)	1145, 1749
BanI	GGYRCC	1 cut(s)	944
BanII	GRGCYC	3 cut(s)	852, 1023, 1563
BauI	CACGAG	1 cut(s)	1114
BbsI	GAAGAC	1 cut(s)	691
Bbv12I	GWGCWC	4 cut(s)	852, 1023, 1563, 2110
BbvI	GCAGC	2 cut(s)	615, 1812
BceAI	ACGGC	1 cut(s)	445
BcgI	CGANNNNNNTGC	2 cut(s)	1166, 1200
BciT130I	CCWGG	6 cut(s)	267, 695, 845, 1414, 1451, 1482
BcnI	CCSGG	1 cut(s)	1243
BcoDI	GTCTC	2 cut(s)	295, 428
BfaI	CTAG	6 cut(s)	404, 1190, 1337, 1346, 1622, 1835
BfmI	CTRYAG	1 cut(s)	1564
BfrI	CTTAAG	1 cut(s)	277
BfuAI	ACCTGC	1 cut(s)	2063
BglI	GCCNNNNNGGC	1 cut(s)	1244
BglII	AGATCT	1 cut(s)	2084
BisI	GCNGC	2 cut(s)	604, 1801
BlsI	GCNGC	2 cut(s)	605, 1802
BmcAI	AGTACT	1 cut(s)	1972
Bme1390I	CCNGG	7 cut(s)	267, 695, 845, 1243, 1414, 1451, 1482
Bme18I	GGWCC	5 cut(s)	233, 800, 919, 1288, 1447
BmgT120I	GGNCC	6 cut(s)	233, 800, 919, 1245, 1288, 1447
BmiI	GGNNCC	5 cut(s)	571, 802, 946, 1246, 1314
BmrFI	CCNGG	7 cut(s)	267, 695, 845, 1243, 1414, 1451, 1482
BmrI	ACTGGG	1 cut(s)	1802
BmsI	GCATC	2 cut(s)	1560, 1812
BmuI	ACTGGG	1 cut(s)	1802
BpiI	GAAGAC	1 cut(s)	691
BplI	GAGNNNNNCTC	2 cut(s)	839, 871
BpmI	CTGGAG	4 cut(s)	677, 866, 1969, 1977
Bpu14I	TTCGAA	1 cut(s)	1820
BpuEI	CTTGAG	1 cut(s)	430
BpuMI	CCSGG	1 cut(s)	1243
BsaJI	CCNNGG	6 cut(s)	27, 198, 266, 1069, 1159, 1242
Bsc4I	CCNNNNNNNGG	3 cut(s)	272, 868, 1958
Bse118I	RCCGGY	2 cut(s)	781, 1469
Bse1I	ACTGG	6 cut(s)	673, 1093, 1631, 1808, 1963, 1986
Bse21I	CCTNAGG	1 cut(s)	1554
Bse3DI	GCAATG	2 cut(s)	56, 817
BseBI	CCWGG	6 cut(s)	267, 695, 845, 1414, 1451, 1482
BseDI	CCNNGG	6 cut(s)	27, 198, 266, 1069, 1159, 1242
BseGI	GGATG	2 cut(s)	1575, 1803
BseLI	CCNNNNNNNGG	3 cut(s)	272, 868, 1958
BseMI	GCAATG	2 cut(s)	56, 817
BseMII	CTCAG	3 cut(s)	1545, 1735, 2093
BseNI	ACTGG	6 cut(s)	673, 1093, 1631, 1808, 1963, 1986
BseRI	GAGGAG	2 cut(s)	1043, 1571
BseSI	GKGCMC	2 cut(s)	1410, 2110
BseXI	GCAGC	2 cut(s)	615, 1812
BseYI	CCCAGC	2 cut(s)	295, 881
BsgI	GTGCAG	2 cut(s)	955, 2010
Bsh1236I	CGCG	1 cut(s)	705
BshFI	GGCC	8 cut(s)	170, 432, 753, 1145, 1247, 1595, 1749, 1962
BshNI	GGYRCC	1 cut(s)	944
BsiHKAI	GWGCWC	4 cut(s)	852, 1023, 1563, 2110
BsiSI	CCGG	3 cut(s)	782, 1242, 1470
BslFI	GGGAC	1 cut(s)	32
BslI	CCNNNNNNNGG	3 cut(s)	272, 868, 1958
BsmAI	GTCTC	2 cut(s)	295, 428
BsmBI	CGTCTC	1 cut(s)	428
BsmFI	GGGAC	1 cut(s)	32
BsnI	GGCC	8 cut(s)	170, 432, 753, 1145, 1247, 1595, 1749, 1962
Bsp119I	TTCGAA	1 cut(s)	1820
Bsp1286I	GDGCHC	5 cut(s)	852, 1023, 1410, 1563, 2110
BspACI	CCGC	5 cut(s)	282, 703, 997, 1026, 1100
BspANI	GGCC	8 cut(s)	170, 432, 753, 1145, 1247, 1595, 1749, 1962
BspCNI	CTCAG	3 cut(s)	1546, 1734, 2092
BspFNI	CGCG	1 cut(s)	705
BspHI	TCATGA	1 cut(s)	1765
BspLI	GGNNCC	5 cut(s)	571, 802, 946, 1246, 1314
BspMAI	CTGCAG	1 cut(s)	1568
BspMI	ACCTGC	1 cut(s)	2063
BspPI	GGATC	6 cut(s)	144, 650, 835, 1782, 1854, 2129
BspT104I	TTCGAA	1 cut(s)	1820
BspT107I	GGYRCC	1 cut(s)	944
BspTI	CTTAAG	1 cut(s)	277
BsrDI	GCAATG	2 cut(s)	56, 817
BsrFI	RCCGGY	2 cut(s)	781, 1469
BsrI	ACTGG	6 cut(s)	673, 1093, 1631, 1808, 1963, 1986
BssAI	RCCGGY	2 cut(s)	781, 1469
BssECI	CCNNGG	6 cut(s)	27, 198, 266, 1069, 1159, 1242
BssSI	CACGAG	1 cut(s)	1114
BssT1I	CCWWGG	3 cut(s)	27, 1069, 1159
Bst2BI	CACGAG	1 cut(s)	1114
Bst2UI	CCWGG	6 cut(s)	267, 695, 845, 1414, 1451, 1482
Bst4CI	ACNGT	2 cut(s)	206, 1862
BstAFI	CTTAAG	1 cut(s)	277
BstAPI	GCANNNNNTGC	1 cut(s)	1880
BstBI	TTCGAA	1 cut(s)	1820
BstC8I	GCNNGC	5 cut(s)	460, 464, 568, 709, 1147
BstDEI	CTNAG	6 cut(s)	157, 1554, 1721, 1778, 2045, 2079
BstEII	GGTNACC	1 cut(s)	893
BstENI	CCTNNNNNAGG	1 cut(s)	270
BstF5I	GGATG	2 cut(s)	1575, 1803
BstFNI	CGCG	1 cut(s)	705
BstHHI	GCGC	2 cut(s)	707, 1874
BstMAI	GTCTC	2 cut(s)	295, 428
BstMWI	GCNNNNNNNGC	6 cut(s)	558, 567, 600, 778, 1244, 1880
BstNI	CCWGG	6 cut(s)	267, 695, 845, 1414, 1451, 1482
BstPI	GGTNACC	1 cut(s)	893
BstSCI	CCNGG	7 cut(s)	265, 693, 843, 1241, 1412, 1449, 1480
BstSFI	CTRYAG	1 cut(s)	1564
BstSLI	GKGCMC	2 cut(s)	1410, 2110
BstUI	CGCG	1 cut(s)	705
BstV1I	GCAGC	2 cut(s)	615, 1812
BstV2I	GAAGAC	1 cut(s)	691
BstX2I	RGATCY	4 cut(s)	840, 1774, 1846, 2084
BstXI	CCANNNNNNTGG	1 cut(s)	186
BstYI	RGATCY	4 cut(s)	840, 1774, 1846, 2084
Bsu36I	CCTNAGG	1 cut(s)	1554
BsuRI	GGCC	8 cut(s)	170, 432, 753, 1145, 1247, 1595, 1749, 1962
BtsCI	GGATG	2 cut(s)	1575, 1803
BtsIMutI	CAGTG	4 cut(s)	83, 1086, 1124, 1729
BveI	ACCTGC	1 cut(s)	2063
Cac8I	GCNNGC	5 cut(s)	460, 464, 568, 709, 1147
CaiI	CAGNNNCTG	1 cut(s)	1637
CciI	TCATGA	1 cut(s)	1765
CfoI	GCGC	2 cut(s)	707, 1874
Cfr10I	RCCGGY	2 cut(s)	781, 1469
Cfr13I	GGNCC	6 cut(s)	233, 800, 919, 1245, 1288, 1447
CseI	GACGC	1 cut(s)	152
Csp6I	GTAC	5 cut(s)	359, 1656, 1949, 1971, 2076
CviAII	CATG	3 cut(s)	34, 1516, 1766
CviQI	GTAC	5 cut(s)	359, 1656, 1949, 1971, 2076
DdeI	CTNAG	6 cut(s)	157, 1554, 1721, 1778, 2045, 2079
EaeI	YGGCCR	3 cut(s)	430, 1143, 1747
EciI	GGCGGA	1 cut(s)	1015
Ecl136II	GAGCTC	3 cut(s)	850, 1021, 1561
Eco130I	CCWWGG	3 cut(s)	27, 1069, 1159
Eco147I	AGGCCT	1 cut(s)	170
Eco24I	GRGCYC	3 cut(s)	852, 1023, 1563
Eco47I	GGWCC	5 cut(s)	233, 800, 919, 1288, 1447
Eco53kI	GAGCTC	3 cut(s)	850, 1021, 1561
Eco57I	CTGAAG	5 cut(s)	452, 507, 857, 1900, 1922
Eco81I	CCTNAGG	1 cut(s)	1554
Eco91I	GGTNACC	1 cut(s)	893
EcoICRI	GAGCTC	3 cut(s)	850, 1021, 1561
EcoNI	CCTNNNNNAGG	1 cut(s)	270
EcoO109I	RGGNCCY	2 cut(s)	800, 1245
EcoO65I	GGTNACC	1 cut(s)	893
EcoRII	CCWGG	6 cut(s)	265, 693, 843, 1412, 1449, 1480
EcoT14I	CCWWGG	3 cut(s)	27, 1069, 1159
EcoT38I	GRGCYC	3 cut(s)	852, 1023, 1563
ErhI	CCWWGG	3 cut(s)	27, 1069, 1159
Esp3I	CGTCTC	1 cut(s)	428
FaeI	CATG	3 cut(s)	37, 1519, 1769
FaqI	GGGAC	1 cut(s)	32
FatI	CATG	3 cut(s)	33, 1515, 1765
FauI	CCCGC	1 cut(s)	990
FblI	GTMKAC	2 cut(s)	477, 1498
Fnu4HI	GCNGC	2 cut(s)	604, 1801
FokI	GGATG	2 cut(s)	1582, 1790
FriOI	GRGCYC	3 cut(s)	852, 1023, 1563
Fsp4HI	GCNGC	2 cut(s)	604, 1801
FspBI	CTAG	6 cut(s)	404, 1190, 1337, 1346, 1622, 1835
GlaI	GCGC	2 cut(s)	706, 1873
GluI	GCNGC	2 cut(s)	604, 1801
GsaI	CCCAGC	2 cut(s)	299, 885
GsuI	CTGGAG	4 cut(s)	677, 866, 1969, 1977
HaeIII	GGCC	8 cut(s)	170, 432, 753, 1145, 1247, 1595, 1749, 1962
HapII	CCGG	3 cut(s)	782, 1242, 1470
HgaI	GACGC	1 cut(s)	152
HhaI	GCGC	2 cut(s)	707, 1874
Hin1II	CATG	3 cut(s)	37, 1519, 1769
Hin6I	GCGC	2 cut(s)	705, 1872
HinP1I	GCGC	2 cut(s)	705, 1872
HincII	GTYRAC	1 cut(s)	1003
HindII	GTYRAC	1 cut(s)	1003
HindIII	AAGCTT	2 cut(s)	464, 1424
HinfI	GANTC	8 cut(s)	246, 672, 1193, 1273, 1548, 1822, 2033, 2098
HpaII	CCGG	3 cut(s)	782, 1242, 1470
HphI	GGTGA	8 cut(s)	168, 295, 313, 383, 613, 1048, 1270, 1285
Hpy166II	GTNNAC	8 cut(s)	359, 478, 631, 984, 1003, 1395, 1499, 2108
Hpy188I	TCNGA	6 cut(s)	202, 471, 837, 1815, 1899, 2082
Hpy188III	TCNNGA	9 cut(s)	140, 236, 365, 404, 798, 1622, 1647, 1766, 1956
Hpy8I	GTNNAC	8 cut(s)	359, 478, 631, 984, 1003, 1395, 1499, 2108
HpyAV	CCTTC	6 cut(s)	114, 212, 649, 1039, 1445, 1988
HpyCH4III	ACNGT	2 cut(s)	206, 1862
HpyCH4IV	ACGT	1 cut(s)	1043
HpyF10VI	GCNNNNNNNGC	6 cut(s)	558, 567, 600, 778, 1244, 1880
HpyF3I	CTNAG	6 cut(s)	157, 1554, 1721, 1778, 2045, 2079
HpySE526I	ACGT	1 cut(s)	1043
Hsp92II	CATG	3 cut(s)	37, 1519, 1769
HspAI	GCGC	2 cut(s)	705, 1872
LmnI	GCTCC	5 cut(s)	105, 575, 696, 847, 1558
Lsp1109I	GCAGC	2 cut(s)	615, 1812
LweI	GCATC	2 cut(s)	1560, 1812
MaeI	CTAG	6 cut(s)	404, 1190, 1337, 1346, 1622, 1835
MaeII	ACGT	1 cut(s)	1043
MaeIII	GTNAC	7 cut(s)	16, 140, 517, 893, 1095, 1122, 1626
MboII	GAAGA	8 cut(s)	49, 691, 850, 1526, 1754, 1906, 1928, 2079
MfeI	CAATTG	1 cut(s)	1751
MflI	RGATCY	4 cut(s)	840, 1774, 1846, 2084
MhlI	GDGCHC	5 cut(s)	852, 1023, 1410, 1563, 2110
MlsI	TGGCCA	2 cut(s)	1145, 1749
MluNI	TGGCCA	2 cut(s)	1145, 1749
MlyI	GAGTC	2 cut(s)	255, 666
MmeI	TCCRAC	7 cut(s)	790, 888, 1072, 1290, 1691, 1752, 2115
Mox20I	TGGCCA	2 cut(s)	1145, 1749
MscI	TGGCCA	2 cut(s)	1145, 1749
MseI	TTAA	8 cut(s)	278, 827, 963, 1010, 1229, 1428, 1458, 2146
MslI	CAYNNNNRTG	2 cut(s)	626, 2008
Msp20I	TGGCCA	2 cut(s)	1145, 1749
MspCI	CTTAAG	1 cut(s)	277
MspI	CCGG	3 cut(s)	782, 1242, 1470
MspR9I	CCNGG	7 cut(s)	267, 695, 845, 1243, 1414, 1451, 1482
MunI	CAATTG	1 cut(s)	1751
MvaI	CCWGG	6 cut(s)	267, 695, 845, 1414, 1451, 1482
MvnI	CGCG	1 cut(s)	705
MwoI	GCNNNNNNNGC	6 cut(s)	558, 567, 600, 778, 1244, 1880
NciI	CCSGG	1 cut(s)	1243
NlaIII	CATG	3 cut(s)	37, 1519, 1769
NlaIV	GGNNCC	5 cut(s)	571, 802, 946, 1246, 1314
NmuCI	GTSAC	3 cut(s)	140, 517, 1122
NspV	TTCGAA	1 cut(s)	1820
OliI	CACNNNNGTG	1 cut(s)	626
PagI	TCATGA	1 cut(s)	1765
PceI	AGGCCT	1 cut(s)	170
PcsI	WCGNNNNNNNCGW	1 cut(s)	136
PfeI	GAWTC	6 cut(s)	1193, 1273, 1548, 1822, 2033, 2098
PflMI	CCANNNNNTGG	1 cut(s)	868
PfoI	TCCNGGA	1 cut(s)	843
PkrI	GCNGC	2 cut(s)	605, 1802
PleI	GAGTC	2 cut(s)	254, 666
PpsI	GAGTC	2 cut(s)	254, 666
PpuMI	RGGWCCY	1 cut(s)	800
PsiI	TTATAA	1 cut(s)	1466
Psp124BI	GAGCTC	3 cut(s)	852, 1023, 1563
Psp5II	RGGWCCY	1 cut(s)	800
Psp6I	CCWGG	6 cut(s)	265, 693, 843, 1412, 1449, 1480
PspEI	GGTNACC	1 cut(s)	893
PspFI	CCCAGC	2 cut(s)	295, 881
PspGI	CCWGG	6 cut(s)	265, 693, 843, 1412, 1449, 1480
PspN4I	GGNNCC	5 cut(s)	571, 802, 946, 1246, 1314
PspPI	GGNCC	6 cut(s)	233, 800, 919, 1245, 1288, 1447
PspPPI	RGGWCCY	1 cut(s)	800
PstI	CTGCAG	1 cut(s)	1568
PstNI	CAGNNNCTG	1 cut(s)	1637
PsuI	RGATCY	4 cut(s)	840, 1774, 1846, 2084
RsaI	GTAC	5 cut(s)	360, 1657, 1950, 1972, 2077
RsaNI	GTAC	5 cut(s)	359, 1656, 1949, 1971, 2076
RseI	CAYNNNNRTG	2 cut(s)	626, 2008
SacI	GAGCTC	3 cut(s)	852, 1023, 1563
SaqAI	TTAA	8 cut(s)	278, 827, 963, 1010, 1229, 1428, 1458, 2146
SatI	GCNGC	2 cut(s)	604, 1801
Sau96I	GGNCC	6 cut(s)	233, 800, 919, 1245, 1288, 1447
ScaI	AGTACT	1 cut(s)	1972
SchI	GAGTC	2 cut(s)	255, 666
ScrFI	CCNGG	7 cut(s)	267, 695, 845, 1243, 1414, 1451, 1482
SduI	GDGCHC	5 cut(s)	852, 1023, 1410, 1563, 2110
SfaNI	GCATC	2 cut(s)	1560, 1812
SfcI	CTRYAG	1 cut(s)	1564
SfuI	TTCGAA	1 cut(s)	1820
SinI	GGWCC	5 cut(s)	233, 800, 919, 1288, 1447
SmiMI	CAYNNNNRTG	2 cut(s)	626, 2008
SmlI	CTYRAG	2 cut(s)	277, 409
SmoI	CTYRAG	2 cut(s)	277, 409
SseBI	AGGCCT	1 cut(s)	170
SsiI	CCGC	5 cut(s)	282, 703, 997, 1026, 1100
SspMI	CTAG	6 cut(s)	404, 1190, 1337, 1346, 1622, 1835
SstI	GAGCTC	3 cut(s)	852, 1023, 1563
StuI	AGGCCT	1 cut(s)	170
StyD4I	CCNGG	7 cut(s)	265, 693, 843, 1241, 1412, 1449, 1480
StyI	CCWWGG	3 cut(s)	27, 1069, 1159
TaaI	ACNGT	2 cut(s)	206, 1862
TaiI	ACGT	1 cut(s)	1046
TaqI	TCGA	3 cut(s)	130, 244, 1820
TatI	WGTACW	2 cut(s)	358, 1970
TfiI	GAWTC	6 cut(s)	1193, 1273, 1548, 1822, 2033, 2098
Tru1I	TTAA	8 cut(s)	278, 827, 963, 1010, 1229, 1428, 1458, 2146
Tru9I	TTAA	8 cut(s)	278, 827, 963, 1010, 1229, 1428, 1458, 2146
TscAI	CASTG	4 cut(s)	83, 1093, 1131, 1729
TseFI	GTSAC	3 cut(s)	140, 517, 1122
TseI	GCWGC	2 cut(s)	603, 1800
Tsp45I	GTSAC	3 cut(s)	140, 517, 1122
TspDTI	ATGAA	7 cut(s)	17, 50, 76, 435, 468, 1344, 1754
TspRI	CASTG	4 cut(s)	83, 1093, 1131, 1729
Van91I	CCANNNNNTGG	1 cut(s)	868
Vha464I	CTTAAG	1 cut(s)	277
VneI	GTGCAC	1 cut(s)	2106
VpaK11BI	GGWCC	5 cut(s)	233, 800, 919, 1288, 1447
XagI	CCTNNNNNAGG	1 cut(s)	270
XapI	RAATTY	2 cut(s)	991, 1900
XbaI	TCTAGA	2 cut(s)	403, 1621
XmiI	GTMKAC	2 cut(s)	477, 1498
XspI	CTAG	6 cut(s)	404, 1190, 1337, 1346, 1622, 1835
ZrmI	AGTACT	1 cut(s)	1972

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.