Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0002130

Physical Location & Seq

Genomic Coordinates Reverse (-)

34789473 .. 34801056

Gene Structure 11584 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1239500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3162 bp

ATGTATATGGCATATGGATGGCCGCAGGTCATCCCACTCGAACAGGGTCAATGCCCTTCTTCCCAAAAGATCATATACTTCAAGGTCATCAATCGCTTGCTGCTTGTCGTCTCTCCCTCTCACCTTGAGCTCTGGAGCTCTTCCCAGCATAAAGTTAGACTGGGGAAGTACATGAGGGATTCAGATTCAGTGCAGAGGGAAGGTGAGAATTTGCAAGCTGTTTGGAGCCCTGATGCCAAATTGATCGCCGTTCTTACATCGTCATTCTTTCTTCACCTTTTCAAGGTCCAGTTTACTGAGAAAAAAATACAACTAGGAGGGAAGCAACCCTCTGGTTTGTTTCTTGCTTCTATATCTCTTCTTCTCAGTGAGCAGGTGCCATTTGCAGAAAATGACTTGGCAGTGAGCAATATTGTAAGCGATAGCAAACATATACTATTTGGACTTTCTAATGGAGGACTGTATAGTATCTCCTGGAAAGGAGAGTTCTATGGGACTTTTGATCTAGATCCATTTCCACGTGATGGCAGTGAAGTTATCCCGTCACCACATTCTTTAGATAATGGTGTTGCTTCTAAAGGGGTTCCAGGAGCGATTTGCATCTCCCGGAAGTCTGCTATTATCCAGCTAGACCTTAGCTATCCATTGAGGTTGCTGTTTGTGTTGTATTCTGATGGACAATTAGTGTCATGTTCTATAAGTAAGAAAGGTTTAAAACATGTTGAATCTATTAAAGCTGAGAAAAGGTTGGGGGTTGGTGATGCTGTATGTGCTTCAGTAGCTTCAGAGCAACAAATCCTTGCTGTTGGTACCAAAAGAGGGCTTGTGGAGTTATATGACCTTGCAGAATCTGCATCACTGATTCGATCCGTCTCTCTTTATGACTGGGGATACTCAATGGAAGACACTGGACCTGTCAGTTGCATTGCGTGGACACCTGATAATTCTGCTTTTGCAGTTGGGTGGAAGTTAAGAGGACTTACAGTTTGGTCTGTCTCTGGTTGTCGTTTGATGTCAACAATCCGTCAAATAGGTTTAAGTTCAGTATCTTCTCCAATGGTTAAGCCTATCCACGAATGTAAATATGAACCTTTGATGACTGGCACCTCACTGATGCAGTGGGATGAATATGGATATAGGCTTTATGCTATTGAAGAAAGATCTTTGGAGAGGGTTCTTGCATTTTCCTTTGGAAAATGTTGCCTTAACAGAGGAGTCTCAGGAATGACATATGTTCGTCAAGTGATATATGGTGATGATCGATTGCTTGTTGTGCAGTCTGAAGATACTGATGAACTTAAAATGCTACATCTTAACCTTCCAGTTTCTTATATCTCCCAAAATTGGCCAGTTCAACATGTAGCTGCTAGCAAGGATGGAATGTACTTGGCAGTTGCTGGTCTCCATGGGTTAATCATATATGATATACGATGGAAGAAGTGGCGAGTGTTTGGAGACATTACTCAGGAACAAAAGATTCAGTGCAAAGGTTTGTTATGGATGGGGAAGATTGTTGTTGTCTGCAACTACATTGATTCTTCTAACACTTACGAATTGCTTTTCTATCCAAGATATCATCTTGATCAGAGCTCGCTACTTTGTCGAAAACCATTGCTGGCTAAACCAATGGTGATGGATGTCTATCAAGAGCATATACTTGTCACATATCGCCCATTTGATGTACACATATACCATGTCAAGTTATTTGGTGAATTGACACCTTTCACTACTCCAAATTTACAGCTTTCTACAGTACGAGAACTCTCAATTATGACTGCAAAGAGCCATCCTGCAGCAATGCGTTTTGTCCCTGATCAGCTTCCAAGAGAGGGCATTTCAAACAATCACATTTCTAATTCAGATCCTTTATCAAAGGAGCCTGCGAGGTGTTTGATACAGAGAGTTAATGGGGAGCTTTCACTTCTTGATTTGGATGATGGACGTGAGAGGGAGCTTACTGATTCTATTGAATTATTTTGGGTTACATGTGGTCAATCAGAGGAGAAAACAAATCTTATTGAGGAAGTTTCATGGTTAGATTATGGCCACCGAGGAATGCAGGTTTGGTATCCATCTCTGGGGGTTGACCCTTTTAAGCAGGAGGATTTCTTACAGTTGGATCCGGAACTTGAATTTGATCGTGAGGTATACCCTCTGGGACTTCTTCCAAATGCTGGTGTTGTTGTTGGCGTTTCCCAGAGAATGTCATTTTCTGCCAGCACAGAATTTCCATGTTTTGAGCCAACTCCTCAAGCTCAAACTATACTGCATTGCCTTCTGAGGCACCTTATTCAGAGGGACAAAAGCGAGGAAGCTTTAAGGTTGGCCCAGTTATCAGCAGAAAAGCCTCATTTTTCTCATTGTTTGGAGTGGCTTCTCTTTACTGTGTTTGATGCCGATATATCCGGGCAAAATGTAAACAAGAATCAGAACTCTGTCCCTAGATTTGCAAAGAGTCCAACTCTCTTAGAGAAGACCTGTGATTTGCTCAGAAATTTTCCAGAATATTTTGATGTGGTCGTCAGTGTTGCAAGAAAAACTGATGGTCGACATTGGGCGGATTTGTTCTCTGCTGCTGGGAGATCAACAGAGTTGTTTGAGGAATGCTTCCAACGTAGATGGTACCGGACTGCTGCCTGCTATATACTTGTCATTGCGAAGCTTGAAGGTCCTGCAGTCAGTCAATATTGTGCTTTGCGTTTACTACAGGCAACACTTGATGAATCGTTATATGAACTCGCTGGGGAGCTGGTGAGGTTCTTGCTGAGATCGGGAAGGGAATATGAACAGCCATCAACAGATTCAGATGGACTATCTCCCAAAATTTTGGGCTATTTTGGTTTCCGTACTAATTTCAGAAAGCAGTCCTTGGATAAGAGTACCTCATTTAAGGAGCAGAACGCACATGTTGCTTCCGTGAAGAGTATCTTAGAAAGCCATGCTAACTTTTTGATGTCAGGCAAAGAGCTCTCAAAGCTAGTTGCATTTGTGAAAGGCACTCAGTTTGATTTAGTGGAATATCTTCAAAGAGAGAGAAATGGAAGTGCTCGGCTGGAGAATTTTGCTTCAGGGCTGGAATTAATAGGACAAAAGGCATCAGCATCTGAAAATCCCTTTATTCTAGTGTTATTTTTTTTTCTTTTATTTTTGTTAAGAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

RIC1

Protein Analysis

1054

Amino Acids

118.89

Weight (kDa)

6.22

Isoelectric Point (pI)

43.24

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_RIC1_2nd	PF25440	417 - 750	7.4e-90	RIC1 second beta propeller domain
RIC1	PF07064	757 - 930	2.5e-48	RIC1 C-terminal alpha solenoid region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002130)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G61480 AT3G61480 AT5G28350 AT5G28350
fragaria_vesca	FvH4_5g28900 FvH4_5g28900 FvH4_5g28900
malus_domestica	MD01G1067900.v1.1 MD01G1068000.v1.1 MD11G1239500.v1.1
prunus_persica	Prupe.2G174200_v2.0.a1 Prupe.2G174200_v2.0.a1 Prupe.2G174200_v2.0.a1
pyrus_communis	pycom01g09700 pycom01g09710 pycom07g13050 pycom11g21100
rosa_chinensis	RchiOBHm_Chr1g0356891 RchiOBHm_Chr1g0356901 RchiOBHm_Chr1g0356911 RchiOBHm_Chr1g0356921 RchiOBHm_Chr1g0356931 RchiOBHm_Chr7g0221211
rosa_laevigata	RLG00000002173 RLG00000028071
rosa_multiflora	Rmu_sc0000324.1_g000014
rosa_roxburghii	Rroxscaffold_3G00238580 Rroxscaffold_4G00299210
rosa_rugosa	Rorug01G0251900 Rorug01G0252000 Rorug07G0201300
rosa_samantha	Rh1AG266600 Rh1AG266700 Rh1BG234000 Rh1CG250100 Rh1DG261500 Rh6DG315800 Rh7AG340100 Rh7BG331300 Rh7CG358100 Rh7DG338800 Rh7DG338900
rosa_wichuraiana	Rw1G023540 Rw7G028960

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	364
Acc36I	ACCTGC	3 cut(s)	16, 364, 2050
Acc65I	GGTACC	2 cut(s)	809, 2622
AccB1I	GGYRCC	5 cut(s)	376, 809, 1103, 2283, 2622
AccB7I	CCANNNNNTGG	2 cut(s)	524, 2174
AccI	GTMKAC	2 cut(s)	2148, 2548
AccIII	TCCGGA	1 cut(s)	2122
AciI	CCGC	2 cut(s)	23, 2558
AclWI	GGATC	5 cut(s)	503, 861, 1856, 2114, 2127
AcoI	YGGCCR	3 cut(s)	20, 1346, 2044
AcsI	RAATTY	8 cut(s)	208, 1735, 2132, 2225, 2494, 2823, 3058, 3156
AcuI	CTGAAG	4 cut(s)	759, 768, 1302, 3051
AcvI	CACGTG	1 cut(s)	521
AfaI	GTAC	8 cut(s)	170, 811, 1385, 1683, 1755, 2624, 2848, 2881
AfiI	CCNNNNNNNGG	7 cut(s)	283, 524, 819, 1344, 1829, 2078, 2174
AflIII	ACRYGT	4 cut(s)	718, 1357, 1985, 2905
AjiI	CACGTC	1 cut(s)	1943
AjnI	CCWGG	2 cut(s)	473, 586
AjuI	GAANNNNNNNTTGG	2 cut(s)	2047, 2079
Alw21I	GWGCWC	5 cut(s)	132, 140, 1592, 2970, 3049
Alw26I	GTCTC	6 cut(s)	115, 877, 1000, 1222, 1406, 1449
AlwI	GGATC	5 cut(s)	503, 861, 1856, 2114, 2127
AlwNI	CAGNNNCTG	3 cut(s)	851, 1397, 3104
Aor13HI	TCCGGA	1 cut(s)	2122
AoxI	GGCC	4 cut(s)	20, 1346, 2044, 2325
ApeKI	GCWGC	5 cut(s)	100, 1364, 1793, 2573, 2633
ApoI	RAATTY	8 cut(s)	208, 1735, 2132, 2225, 2494, 2823, 3058, 3156
ArsI	GACNNNNNNTTYG	4 cut(s)	969, 1001, 2467, 2499
AseI	ATTAAT	1 cut(s)	3080
Asp700I	GAANNNNTTC	1 cut(s)	3021
Asp718I	GGTACC	2 cut(s)	809, 2622
AspS9I	GGNCC	4 cut(s)	286, 911, 2326, 2669
AsuC2I	CCSGG	2 cut(s)	607, 2407
AsuHPI	GGTGA	9 cut(s)	113, 215, 266, 537, 770, 1265, 1642, 1721, 2764
AsuNHI	GCTAGC	1 cut(s)	1367
AvaII	GGWCC	3 cut(s)	286, 911, 2669
BalI	TGGCCA	2 cut(s)	1348, 2046
BamHI	GGATCC	1 cut(s)	2119
BanI	GGYRCC	5 cut(s)	376, 809, 1103, 2283, 2622
BanII	GRGCYC	5 cut(s)	132, 140, 230, 1592, 2970
BbrPI	CACGTG	1 cut(s)	521
BbsI	GAAGAC	2 cut(s)	909, 2480
Bbv12I	GWGCWC	5 cut(s)	132, 140, 1592, 2970, 3049
BbvI	GCAGC	5 cut(s)	87, 1351, 1805, 2560, 2620
BceAI	ACGGC	1 cut(s)	233
BciT130I	CCWGG	2 cut(s)	475, 588
BciVI	GTATCC	2 cut(s)	884, 2079
BclI	TGATCA	2 cut(s)	1582, 1813
BcnI	CCSGG	2 cut(s)	607, 2407
BcoDI	GTCTC	6 cut(s)	115, 877, 1000, 1222, 1406, 1449
BfaI	CTAG	7 cut(s)	314, 506, 629, 1368, 2442, 2978, 3122
BfmI	CTRYAG	4 cut(s)	1749, 1791, 2673, 2705
BfuAI	ACCTGC	3 cut(s)	16, 364, 2050
BfuI	GTATCC	2 cut(s)	884, 2079
BglII	AGATCT	1 cut(s)	1160
BisI	GCNGC	6 cut(s)	23, 101, 1365, 1794, 2574, 2634
BlsI	GCNGC	6 cut(s)	24, 102, 1366, 1795, 2575, 2635
Bme1390I	CCNGG	4 cut(s)	475, 588, 607, 2407
Bme18I	GGWCC	3 cut(s)	286, 911, 2669
BmgBI	CACGTC	1 cut(s)	1943
BmgT120I	GGNCC	4 cut(s)	286, 911, 2326, 2669
BmiI	GGNNCC	9 cut(s)	227, 378, 585, 811, 1105, 1878, 2121, 2285, 2624
BmrFI	CCNGG	4 cut(s)	475, 588, 607, 2407
BmrI	ACTGGG	3 cut(s)	170, 895, 2323
BmsI	GCATC	8 cut(s)	223, 609, 751, 863, 1104, 2383, 3104, 3110
BmtI	GCTAGC	1 cut(s)	1371
BmuI	ACTGGG	3 cut(s)	170, 895, 2323
BpiI	GAAGAC	2 cut(s)	909, 2480
BplI	GAGNNNNNCTC	2 cut(s)	2446, 2478
BpmI	CTGGAG	2 cut(s)	154, 3074
Bpu10I	CCTNAGC	1 cut(s)	635
BpuEI	CTTGAG	2 cut(s)	146, 2235
BpuMI	CCSGG	2 cut(s)	607, 2407
Bsa29I	ATCGAT	1 cut(s)	1261
BsaAI	YACGTR	1 cut(s)	521
BsaBI	GATNNNNATC	3 cut(s)	507, 599, 1641
BsaI	GGTCTC	1 cut(s)	1406
BsaJI	CCNNGG	3 cut(s)	1405, 2050, 2868
BsaWI	WCCGGW	2 cut(s)	2122, 2625
Bsc4I	CCNNNNNNNGG	7 cut(s)	283, 524, 819, 1344, 1829, 2078, 2174
Bse1I	ACTGG	8 cut(s)	165, 289, 890, 913, 1105, 1322, 1349, 2329
Bse3DI	GCAATG	5 cut(s)	924, 1610, 1803, 2269, 2652
Bse8I	GATNNNNATC	3 cut(s)	507, 599, 1641
BseAI	TCCGGA	1 cut(s)	2122
BseBI	CCWGG	2 cut(s)	475, 588
BseCI	ATCGAT	1 cut(s)	1261
BseDI	CCNNGG	3 cut(s)	1405, 2050, 2868
BseGI	GGATG	8 cut(s)	23, 30, 1129, 1381, 1506, 1642, 1786, 1939
BseJI	GATNNNNATC	3 cut(s)	507, 599, 1641
BseLI	CCNNNNNNNGG	7 cut(s)	283, 524, 819, 1344, 1829, 2078, 2174
BseMI	GCAATG	5 cut(s)	924, 1610, 1803, 2269, 2652
BseMII	CTCAG	9 cut(s)	288, 379, 729, 1233, 1478, 2270, 2503, 2756, 3014
BseNI	ACTGG	8 cut(s)	165, 289, 890, 913, 1105, 1322, 1349, 2329
BseRI	GAGGAG	3 cut(s)	1227, 2015, 2238
BseXI	GCAGC	5 cut(s)	87, 1351, 1805, 2560, 2620
BseYI	CCCAGC	3 cut(s)	144, 2576, 2741
BsgI	GTGCAG	2 cut(s)	212, 1295
BshFI	GGCC	4 cut(s)	22, 1348, 2046, 2327
BshNI	GGYRCC	5 cut(s)	376, 809, 1103, 2283, 2622
BshVI	ATCGAT	1 cut(s)	1261
BsiHKAI	GWGCWC	5 cut(s)	132, 140, 1592, 2970, 3049
BsiSI	CCGG	4 cut(s)	607, 2123, 2406, 2626
BslFI	GGGAC	5 cut(s)	508, 1793, 2172, 2312, 2423
BslI	CCNNNNNNNGG	7 cut(s)	283, 524, 819, 1344, 1829, 2078, 2174
BsmAI	GTCTC	6 cut(s)	115, 877, 1000, 1222, 1406, 1449
BsmBI	CGTCTC	2 cut(s)	115, 877
BsmFI	GGGAC	5 cut(s)	508, 1793, 2172, 2312, 2423
BsmI	GAATGC	2 cut(s)	2061, 2609
BsnI	GGCC	4 cut(s)	22, 1348, 2046, 2327
Bso31I	GGTCTC	1 cut(s)	1406
Bsp1286I	GDGCHC	6 cut(s)	132, 140, 230, 1592, 2970, 3049
Bsp13I	TCCGGA	1 cut(s)	2122
Bsp1407I	TGTACA	1 cut(s)	1681
Bsp19I	CCATGG	1 cut(s)	1405
BspACI	CCGC	2 cut(s)	23, 2558
BspANI	GGCC	4 cut(s)	22, 1348, 2046, 2327
BspCNI	CTCAG	9 cut(s)	289, 378, 730, 1232, 1477, 2271, 2502, 2757, 3013
BspDI	ATCGAT	1 cut(s)	1261
BspEI	TCCGGA	1 cut(s)	2122
BspLI	GGNNCC	9 cut(s)	227, 378, 585, 811, 1105, 1878, 2121, 2285, 2624
BspMAI	CTGCAG	2 cut(s)	1795, 2677
BspMI	ACCTGC	3 cut(s)	16, 364, 2050
BspOI	GCTAGC	1 cut(s)	1371
BspPI	GGATC	5 cut(s)	503, 861, 1856, 2114, 2127
BspQI	GCTCTTC	1 cut(s)	145
BspT107I	GGYRCC	5 cut(s)	376, 809, 1103, 2283, 2622
BspTNI	GGTCTC	1 cut(s)	1406
BsrDI	GCAATG	5 cut(s)	924, 1610, 1803, 2269, 2652
BsrGI	TGTACA	1 cut(s)	1681
BsrI	ACTGG	8 cut(s)	165, 289, 890, 913, 1105, 1322, 1349, 2329
BssECI	CCNNGG	3 cut(s)	1405, 2050, 2868
BssNAI	GTATAC	1 cut(s)	2149
BssT1I	CCWWGG	2 cut(s)	1405, 2868
Bst1107I	GTATAC	1 cut(s)	2149
Bst2UI	CCWGG	2 cut(s)	475, 588
Bst4CI	ACNGT	5 cut(s)	462, 985, 1753, 2115, 2386
Bst6I	CTCTTC	3 cut(s)	145, 363, 2915
BstAPI	GCANNNNNTGC	2 cut(s)	851, 2909
BstAUI	TGTACA	1 cut(s)	1681
BstBAI	YACGTR	1 cut(s)	521
BstC8I	GCNNGC	8 cut(s)	98, 216, 1369, 1592, 1617, 1881, 2218, 2638
BstDSI	CCRYGG	1 cut(s)	1405
BstENI	CCTNNNNNAGG	1 cut(s)	281
BstF5I	GGATG	8 cut(s)	23, 30, 1129, 1381, 1506, 1642, 1786, 1939
BstMAI	GTCTC	6 cut(s)	115, 877, 1000, 1222, 1406, 1449
BstMWI	GCNNNNNNNGC	6 cut(s)	770, 779, 851, 1273, 2909, 2974
BstNI	CCWGG	2 cut(s)	475, 588
BstNSI	RCATGY	4 cut(s)	722, 1361, 1989, 2909
BstSCI	CCNGG	4 cut(s)	473, 586, 605, 2405
BstSFI	CTRYAG	4 cut(s)	1749, 1791, 2673, 2705
BstV1I	GCAGC	5 cut(s)	87, 1351, 1805, 2560, 2620
BstV2I	GAAGAC	2 cut(s)	909, 2480
BstX2I	RGATCY	4 cut(s)	508, 1160, 1861, 2119
BstXI	CCANNNNNNTGG	1 cut(s)	2827
BstYI	RGATCY	4 cut(s)	508, 1160, 1861, 2119
BstZ17I	GTATAC	1 cut(s)	2149
Bsu15I	ATCGAT	1 cut(s)	1261
BsuI	GTATCC	2 cut(s)	884, 2079
BsuRI	GGCC	4 cut(s)	22, 1348, 2046, 2327
BsuTUI	ATCGAT	1 cut(s)	1261
BtgI	CCRYGG	1 cut(s)	1405
BtrI	CACGTC	1 cut(s)	1943
BtsCI	GGATG	8 cut(s)	23, 30, 1129, 1381, 1506, 1642, 1786, 1939
BtsI	GCAGTG	3 cut(s)	408, 535, 1124
BveI	ACCTGC	3 cut(s)	16, 364, 2050
Cac8I	GCNNGC	8 cut(s)	98, 216, 1369, 1592, 1617, 1881, 2218, 2638
CaiI	CAGNNNCTG	3 cut(s)	851, 1397, 3104
Cfr13I	GGNCC	4 cut(s)	286, 911, 2326, 2669
ClaI	ATCGAT	1 cut(s)	1261
Csp6I	GTAC	8 cut(s)	169, 810, 1384, 1682, 1754, 2623, 2847, 2880
CviQI	GTAC	8 cut(s)	169, 810, 1384, 1682, 1754, 2623, 2847, 2880
DraI	TTTAAA	1 cut(s)	714
EaeI	YGGCCR	3 cut(s)	20, 1346, 2044
Eam1104I	CTCTTC	3 cut(s)	145, 363, 2915
EarI	CTCTTC	3 cut(s)	145, 363, 2915
EciI	GGCGGA	1 cut(s)	2573
Ecl136II	GAGCTC	4 cut(s)	130, 138, 1590, 2968
Eco130I	CCWWGG	2 cut(s)	1405, 2868
Eco24I	GRGCYC	5 cut(s)	132, 140, 230, 1592, 2970
Eco31I	GGTCTC	1 cut(s)	1406
Eco32I	GATATC	1 cut(s)	1574
Eco47I	GGWCC	3 cut(s)	286, 911, 2669
Eco53kI	GAGCTC	4 cut(s)	130, 138, 1590, 2968
Eco57I	CTGAAG	4 cut(s)	759, 768, 1302, 3051
Eco72I	CACGTG	1 cut(s)	521
EcoICRI	GAGCTC	4 cut(s)	130, 138, 1590, 2968
EcoNI	CCTNNNNNAGG	1 cut(s)	281
EcoO109I	RGGNCCY	1 cut(s)	2669
EcoRII	CCWGG	2 cut(s)	473, 586
EcoRV	GATATC	1 cut(s)	1574
EcoT14I	CCWWGG	2 cut(s)	1405, 2868
EcoT38I	GRGCYC	5 cut(s)	132, 140, 230, 1592, 2970
ErhI	CCWWGG	2 cut(s)	1405, 2868
Esp3I	CGTCTC	2 cut(s)	115, 877
FalI	AAGNNNNNCTT	4 cut(s)	2852, 2884, 2912, 2944
FaqI	GGGAC	5 cut(s)	508, 1793, 2172, 2312, 2423
FauNDI	CATATG	2 cut(s)	13, 1231
FbaI	TGATCA	2 cut(s)	1582, 1813
FblI	GTMKAC	2 cut(s)	2148, 2548
Fnu4HI	GCNGC	6 cut(s)	23, 101, 1365, 1794, 2574, 2634
FokI	GGATG	8 cut(s)	17, 30, 1136, 1388, 1513, 1649, 1773, 1946
FriOI	GRGCYC	5 cut(s)	132, 140, 230, 1592, 2970
Fsp4HI	GCNGC	6 cut(s)	23, 101, 1365, 1794, 2574, 2634
FspBI	CTAG	7 cut(s)	314, 506, 629, 1368, 2442, 2978, 3122
GluI	GCNGC	6 cut(s)	23, 101, 1365, 1794, 2574, 2634
GsaI	CCCAGC	3 cut(s)	148, 2580, 2745
GsuI	CTGGAG	2 cut(s)	154, 3074
HaeIII	GGCC	4 cut(s)	22, 1348, 2046, 2327
HapII	CCGG	4 cut(s)	607, 2123, 2406, 2626
HincII	GTYRAC	3 cut(s)	1017, 2086, 2549
HindII	GTYRAC	3 cut(s)	1017, 2086, 2549
HindIII	AAGCTT	2 cut(s)	2313, 2660
HpaII	CCGG	4 cut(s)	607, 2123, 2406, 2626
HphI	GGTGA	9 cut(s)	113, 215, 266, 537, 770, 1265, 1642, 1721, 2764
Hpy166II	GTNNAC	9 cut(s)	294, 933, 1017, 1684, 2086, 2149, 2419, 2549, 2702
Hpy8I	GTNNAC	9 cut(s)	294, 933, 1017, 1684, 2086, 2149, 2419, 2549, 2702
HpyAV	CCTTC	6 cut(s)	66, 194, 1328, 2285, 2660, 2769
HpyCH4III	ACNGT	5 cut(s)	462, 985, 1753, 2115, 2386
HpyCH4IV	ACGT	3 cut(s)	520, 1942, 2614
HpyF10VI	GCNNNNNNNGC	6 cut(s)	770, 779, 851, 1273, 2909, 2974
HpySE526I	ACGT	3 cut(s)	520, 1942, 2614
Kpn2I	TCCGGA	1 cut(s)	2122
KpnI	GGTACC	2 cut(s)	813, 2626
Ksp22I	TGATCA	2 cut(s)	1582, 1813
LguI	GCTCTTC	1 cut(s)	145
LmnI	GCTCC	8 cut(s)	135, 225, 590, 1876, 1912, 1951, 2746, 2893
Lsp1109I	GCAGC	5 cut(s)	87, 1351, 1805, 2560, 2620
LweI	GCATC	8 cut(s)	223, 609, 751, 863, 1104, 2383, 3104, 3110
MaeI	CTAG	7 cut(s)	314, 506, 629, 1368, 2442, 2978, 3122
MaeII	ACGT	3 cut(s)	520, 1942, 2614
MaeIII	GTNAC	3 cut(s)	543, 1660, 1981
MflI	RGATCY	4 cut(s)	508, 1160, 1861, 2119
MhlI	GDGCHC	6 cut(s)	132, 140, 230, 1592, 2970, 3049
MlsI	TGGCCA	2 cut(s)	1348, 2046
MluNI	TGGCCA	2 cut(s)	1348, 2046
MlyI	GAGTC	2 cut(s)	1224, 2464
MmeI	TCCRAC	3 cut(s)	2097, 2483, 2635
Mox20I	TGGCCA	2 cut(s)	1348, 2046
MroI	TCCGGA	1 cut(s)	2122
MroXI	GAANNNNTTC	1 cut(s)	3021
MscI	TGGCCA	2 cut(s)	1348, 2046
MslI	CAYNNNNRTG	1 cut(s)	16
Msp20I	TGGCCA	2 cut(s)	1348, 2046
MspI	CCGG	4 cut(s)	607, 2123, 2406, 2626
MspR9I	CCNGG	4 cut(s)	475, 588, 607, 2407
Mva1269I	GAATGC	2 cut(s)	2061, 2609
MvaI	CCWGG	2 cut(s)	475, 588
MwoI	GCNNNNNNNGC	6 cut(s)	770, 779, 851, 1273, 2909, 2974
NciI	CCSGG	2 cut(s)	607, 2407
NcoI	CCATGG	1 cut(s)	1405
NdeI	CATATG	2 cut(s)	13, 1231
NheI	GCTAGC	1 cut(s)	1367
NlaIV	GGNNCC	9 cut(s)	227, 378, 585, 811, 1105, 1878, 2121, 2285, 2624
NmeAIII	GCCGAG	1 cut(s)	3028
NmuCI	GTSAC	2 cut(s)	543, 1660
NspI	RCATGY	4 cut(s)	722, 1361, 1989, 2909
PaqCI	CACCTGC	1 cut(s)	364
PciI	ACATGT	4 cut(s)	718, 1357, 1985, 2905
PciSI	GCTCTTC	1 cut(s)	145
PctI	GAATGC	2 cut(s)	2061, 2609
PdmI	GAANNNNTTC	1 cut(s)	3021
PflMI	CCANNNNNTGG	2 cut(s)	524, 2174
PfoI	TCCNGGA	3 cut(s)	473, 586, 605
PkrI	GCNGC	6 cut(s)	24, 102, 1366, 1795, 2575, 2635
PleI	GAGTC	2 cut(s)	1223, 2463
PmaCI	CACGTG	1 cut(s)	521
PmlI	CACGTG	1 cut(s)	521
PpsI	GAGTC	2 cut(s)	1223, 2463
Ppu21I	YACGTR	1 cut(s)	521
PpuMI	RGGWCCY	1 cut(s)	2669
PscI	ACATGT	4 cut(s)	718, 1357, 1985, 2905
PshBI	ATTAAT	1 cut(s)	3080
Psp124BI	GAGCTC	4 cut(s)	132, 140, 1592, 2970
Psp5II	RGGWCCY	1 cut(s)	2669
Psp6I	CCWGG	2 cut(s)	473, 586
PspCI	CACGTG	1 cut(s)	521
PspFI	CCCAGC	3 cut(s)	144, 2576, 2741
PspGI	CCWGG	2 cut(s)	473, 586
PspN4I	GGNNCC	9 cut(s)	227, 378, 585, 811, 1105, 1878, 2121, 2285, 2624
PspPI	GGNCC	4 cut(s)	286, 911, 2326, 2669
PspPPI	RGGWCCY	1 cut(s)	2669
PstI	CTGCAG	2 cut(s)	1795, 2677
PstNI	CAGNNNCTG	3 cut(s)	851, 1397, 3104
PsuI	RGATCY	4 cut(s)	508, 1160, 1861, 2119
RsaI	GTAC	8 cut(s)	170, 811, 1385, 1683, 1755, 2624, 2848, 2881
RsaNI	GTAC	8 cut(s)	169, 810, 1384, 1682, 1754, 2623, 2847, 2880
RseI	CAYNNNNRTG	1 cut(s)	16
SacI	GAGCTC	4 cut(s)	132, 140, 1592, 2970
SalI	GTCGAC	1 cut(s)	2547
SapI	GCTCTTC	1 cut(s)	145
SatI	GCNGC	6 cut(s)	23, 101, 1365, 1794, 2574, 2634
Sau96I	GGNCC	4 cut(s)	286, 911, 2326, 2669
SchI	GAGTC	2 cut(s)	1224, 2464
ScrFI	CCNGG	4 cut(s)	475, 588, 607, 2407
SduI	GDGCHC	6 cut(s)	132, 140, 230, 1592, 2970, 3049
SfaNI	GCATC	8 cut(s)	223, 609, 751, 863, 1104, 2383, 3104, 3110
SfcI	CTRYAG	4 cut(s)	1749, 1791, 2673, 2705
SinI	GGWCC	3 cut(s)	286, 911, 2669
SmiMI	CAYNNNNRTG	1 cut(s)	16
SmlI	CTYRAG	2 cut(s)	125, 2250
SmoI	CTYRAG	2 cut(s)	125, 2250
SsiI	CCGC	2 cut(s)	23, 2558
SspI	AATATT	3 cut(s)	412, 2507, 2687
SspMI	CTAG	7 cut(s)	314, 506, 629, 1368, 2442, 2978, 3122
SstI	GAGCTC	4 cut(s)	132, 140, 1592, 2970
StyD4I	CCNGG	4 cut(s)	473, 586, 605, 2405
StyI	CCWWGG	2 cut(s)	1405, 2868
TaaI	ACNGT	5 cut(s)	462, 985, 1753, 2115, 2386
TaiI	ACGT	3 cut(s)	523, 1945, 2617
TaqI	TCGA	5 cut(s)	39, 865, 1261, 1603, 2548
TatI	WGTACW	3 cut(s)	168, 1383, 1681
TauI	GCSGC	1 cut(s)	25
TseFI	GTSAC	2 cut(s)	543, 1660
TseI	GCWGC	5 cut(s)	100, 1364, 1793, 2573, 2633
Tsp45I	GTSAC	2 cut(s)	543, 1660
TspDTI	ATGAA	7 cut(s)	1101, 1140, 1308, 2019, 2736, 2748, 2799
TspGWI	ACGGA	4 cut(s)	859, 1013, 2834, 2905
Van91I	CCANNNNNTGG	2 cut(s)	524, 2174
VpaK11BI	GGWCC	3 cut(s)	286, 911, 2669
VspI	ATTAAT	1 cut(s)	3080
XagI	CCTNNNNNAGG	1 cut(s)	281
XapI	RAATTY	8 cut(s)	208, 1735, 2132, 2225, 2494, 2823, 3058, 3156
XbaI	TCTAGA	1 cut(s)	505
XceI	RCATGY	4 cut(s)	722, 1361, 1989, 2909
XmiI	GTMKAC	2 cut(s)	2148, 2548
XmnI	GAANNNNTTC	1 cut(s)	3021
XspI	CTAG	7 cut(s)	314, 506, 629, 1368, 2442, 2978, 3122

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.