Rh6DG315800

Protein RIC1 homolog

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Reverse (-)
51764403 .. 51766989
2587 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG315800.1

Sequence Viewer

Length: 299 bp
ATGGAAGACACTGGACCTGTCAGTGGTGTTGTGTGGACACCTATTAATTCAGCCTTTGCAGTTGTGTCGAAGTTAAGAGGACTTGCATTTTGGTCTTCTCTTGTTTCATTTGTTGTCAACAACCCGTCAAATAGGTTTGAGTTCATTGCGAGTGTCTGGGGACAGTACTCAGGAACAAAAGATGCAGTGCAAATTAAGGTTTCTTATGGATGGAGAAGATTGCTGTCTGCAAGTGCATTGACTCGACTAACACAGAAGAAAACAAATCTTATCGAGGGAAGTTTCATGGTTAGATTGTG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

99

Amino Acids

10.97

Weight (kDa)

10.36

Isoelectric Point (pI)

17.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 167
AfiI CCNNNNNNNGG 1 cut(s) 23
ArsI GACNNNNNNTTYG 2 cut(s) 72, 104
AseI ATTAAT 1 cut(s) 45
AspS9I GGNCC 1 cut(s) 14
AvaII GGWCC 1 cut(s) 14
BbsI GAAGAC 2 cut(s) 12, 87
BccI CCATC 1 cut(s) 204
BcgI CGANNNNNNTGC 2 cut(s) 48, 82
BmcAI AGTACT 1 cut(s) 167
Bme18I GGWCC 1 cut(s) 14
BmgT120I GGNCC 1 cut(s) 14
BmsI GCATC 1 cut(s) 172
BpiI GAAGAC 2 cut(s) 12, 87
Bsc4I CCNNNNNNNGG 1 cut(s) 23
Bse1I ACTGG 1 cut(s) 16
Bse3DI GCAATG 1 cut(s) 144
BseGI GGATG 1 cut(s) 215
BseLI CCNNNNNNNGG 1 cut(s) 23
BseMI GCAATG 1 cut(s) 144
BseMII CTCAG 1 cut(s) 183
BseNI ACTGG 1 cut(s) 16
BslFI GGGAC 1 cut(s) 174
BslI CCNNNNNNNGG 1 cut(s) 23
BsmFI GGGAC 1 cut(s) 174
BspCNI CTCAG 1 cut(s) 182
BsrDI GCAATG 1 cut(s) 144
BsrI ACTGG 1 cut(s) 16
Bst4CI ACNGT 1 cut(s) 165
BstDEI CTNAG 1 cut(s) 169
BstF5I GGATG 1 cut(s) 215
BstV2I GAAGAC 2 cut(s) 12, 87
BtsCI GGATG 1 cut(s) 215
BtsI GCAGTG 1 cut(s) 192
BtsIMutI CAGTG 3 cut(s) 9, 28, 192
Cfr13I GGNCC 1 cut(s) 14
Csp6I GTAC 1 cut(s) 166
CviAII CATG 1 cut(s) 286
CviJI RGCY 1 cut(s) 53
CviKI_1 RGCY 1 cut(s) 53
CviQI GTAC 1 cut(s) 166
DdeI CTNAG 1 cut(s) 169
Eco47I GGWCC 1 cut(s) 14
FaeI CATG 1 cut(s) 289
FaiI YATR 2 cut(s) 207, 287
FaqI GGGAC 1 cut(s) 174
FatI CATG 1 cut(s) 285
FokI GGATG 1 cut(s) 222
Hin1II CATG 1 cut(s) 289
HincII GTYRAC 1 cut(s) 118
HindII GTYRAC 1 cut(s) 118
HinfI GANTC 1 cut(s) 241
Hpy166II GTNNAC 2 cut(s) 36, 118
Hpy188III TCNNGA 1 cut(s) 171
Hpy8I GTNNAC 2 cut(s) 36, 118
HpyCH4III ACNGT 1 cut(s) 165
HpyCH4V TGCA 6 cut(s) 59, 86, 185, 190, 230, 236
HpyF3I CTNAG 1 cut(s) 169
Hsp92II CATG 1 cut(s) 289
LpnPI CCDG 3 cut(s) 30, 142, 156
LweI GCATC 1 cut(s) 172
MboII GAAGA 4 cut(s) 17, 87, 228, 268
MluCI AATT 2 cut(s) 46, 192
MlyI GAGTC 1 cut(s) 235
MnlI CCTC 2 cut(s) 71, 268
MseI TTAA 3 cut(s) 45, 74, 195
NlaIII CATG 1 cut(s) 289
PleI GAGTC 1 cut(s) 235
PpsI GAGTC 1 cut(s) 235
PshBI ATTAAT 1 cut(s) 45
PspPI GGNCC 1 cut(s) 14
RsaI GTAC 1 cut(s) 167
RsaNI GTAC 1 cut(s) 166
SaqAI TTAA 3 cut(s) 45, 74, 195
Sau96I GGNCC 1 cut(s) 14
ScaI AGTACT 1 cut(s) 167
SchI GAGTC 1 cut(s) 235
SetI ASST 4 cut(s) 19, 43, 137, 201
SfaNI GCATC 1 cut(s) 172
SinI GGWCC 1 cut(s) 14
Sse9I AATT 2 cut(s) 46, 192
TaaI ACNGT 1 cut(s) 165
TaqI TCGA 3 cut(s) 68, 244, 273
TasI AATT 2 cut(s) 46, 192
TatI WGTACW 1 cut(s) 165
Tru1I TTAA 3 cut(s) 45, 74, 195
Tru9I TTAA 3 cut(s) 45, 74, 195
TscAI CASTG 3 cut(s) 16, 28, 192
TspDTI ATGAA 3 cut(s) 96, 133, 274
TspRI CASTG 3 cut(s) 16, 28, 192
VpaK11BI GGWCC 1 cut(s) 14
VspI ATTAAT 1 cut(s) 45
ZrmI AGTACT 1 cut(s) 167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.