Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0002445

Physical Location & Seq

Genomic Coordinates Forward (+)

25482688 .. 25485377

Gene Structure 2690 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1174600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1143 bp

ATGGAAAACACCGACCAACCCTTTAACGAAACGCGTTCCGTTAAAACCCGTACGATCATCTCTGCCTCAAACCCTCACTCAGTCGCTATCCAGTCAATACCGTCGATACAAAGCCCTTCTTTTCCCAAATTCTCGAACCCCCACCCGACACCTTCCATTTCGAGATACCCCGACTCGATTCGCGCCCCATTTTTTATGATGGTGAAAAACAATCCGAACCCGAATCCGAATCCGAATCCGAAGGTGCCGGTTCCCGATCAGAACGAGGAGATCGATTGGGAGATGAGGCCAGGTGGCATGCTGGTCCAGAGGCGGGAAGATGAGGACGCGGCGGCAGTGGCTGCTGGTGTTGGTGCTTCCGCCTCCTCTCGTGGGCCCATGATCAAGATCGACGTCGTTCTCGGCCCTGGCAACGGGCCCCGCTACGAGCTCTTCCTCCCTGCCCACTCCACTTTCGGGGATATGAAGAAGCATGTTTCACAGAAGACTAATTTGGAGCCAGAGGTGCAGAGACTCTTTTTCAGGGGGATGGAGAAGGCAGATGAGGAGCATCTGGACATTGCCGGTGTGAAGAATAATTCGAAGGTGCTGCTTCTGGAAGCCCGAAAGGAGAGTAAGGTTGAGGAGGTAAATCAAAGCAATGAGATGCGAGTCGGTGCTGGAGAAGTTCGAGTCAACAGCAAAGAGGTGCCAACCGGTGGTGGAGATGTTGGAGGCAAAAGCAATGTCATGTCAAAAGCTTCTCAAGCAATTGCTGAAGTCAGAGCCGAGGTTGATAAGCTCGCGGAGAGGGTTGCTGCCTTGGAAGTGGCTGTGGCTGGCAGGAACGAGGTTTCCGATAAAGAATTTGTTGTGCCAACAGAGTTGCTCACGAGGCAGTTGCTGAAATTGGACGGCATTCAAGCTGAAGGAGAAGAAAAAATGCAACGCAAGGCAGAGGTGCGACGTGTCCAGAACTTTGTGGATGCATTGGATGCTCTAAAAACGAGGAACAGCAATCCAGTTAACAACAGTAGCAATGCTGTCACAGTAACAACCGAATGGGAGACCTTTGACTCCGGAGTTGGATCCCTGAATCCCCCAACGTCAACGCCAGAGCCATCTTCAACAGAACCAAATCAGGAATGGGAACACTTCGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006950 GO:0006970 GO:0007275 GO:0008150 GO:0009266 GO:0009409 GO:0009628 GO:0009651 GO:0009791 GO:0010228 GO:0022414 GO:0032501 GO:0032502 GO:0044424 GO:0044444 GO:0044464 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0061458

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

BAG ubiquitin

Protein Analysis

381

Amino Acids

41.66

Weight (kDa)

5.27

Isoelectric Point (pI)

35.37

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ubiquitin	PF00240	141 - 198	2.8e-06	Ubiquitin family
BAG	PF02179	251 - 327	5.2e-16	BAG domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002445)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G51780
fragaria_vesca	FvH4_3g39130 FvH4_3g39130 FvH4_3g39130 FvH4_6g11020
malus_domestica	MD03G1063900.v1.1 MD04G1162100.v1.1 MD11G1067400.v1.1 MD12G1174600.v1.1
prunus_persica	Prupe.6G053300_v2.0.a1 Prupe.6G053300_v2.0.a1 Prupe.6G053300_v2.0.a1 Prupe.6G053300_v2.0.a1 Prupe.6G281800_v2.0.a1
pyrus_communis	pycom03g05150 pycom04g14510 pycom11g05680 pycom11g05690 pycom12g16510
rosa_chinensis	RchiOBHm_Chr3g0462361 RchiOBHm_Chr5g0070521
rosa_laevigata	RLG00000009417 RLG00000024863 RLG00000036138
rosa_multiflora	Rmu_sc0002134.1_g000002 Rmu_ssc0000431.1_g000001
rosa_roxburghii	Rroxscaffold_1G00010680 Rroxscaffold_6G00417550
rosa_rugosa	Rorug03G0056200 Rorug03G0056300 Rorug05G0406400 Rorug05G0406500.1
rosa_samantha	Rh3BG118000 Rh3CG120800 Rh3DG120000 Rh5AG462000 Rh5BG480100 Rh5CG504400 Rh5DG492100
rosa_wichuraiana	Rw3G009710 Rw5G043030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	396
AccB1I	GGYRCC	2 cut(s)	244, 688
AccB7I	CCANNNNNTGG	1 cut(s)	698
AccII	CGCG	4 cut(s)	34, 183, 329, 785
AccIII	TCCGGA	1 cut(s)	1058
AciI	CCGC	6 cut(s)	313, 329, 332, 360, 421, 785
AclWI	GGATC	2 cut(s)	1062, 1075
AcsI	RAATTY	2 cut(s)	128, 845
AcuI	CTGAAG	2 cut(s)	777, 927
AcyI	GRCGYC	1 cut(s)	393
AfaI	GTAC	1 cut(s)	52
AfiI	CCNNNNNNNGG	5 cut(s)	313, 372, 413, 456, 698
AflIII	ACRYGT	2 cut(s)	32, 946
AgeI	ACCGGT	1 cut(s)	695
AgsI	TTSAA	2 cut(s)	902, 1107
AjiI	CACGTC	1 cut(s)	947
AjnI	CCWGG	2 cut(s)	289, 406
AjuI	GAANNNNNNNTTGG	2 cut(s)	476, 508
AloI	GAACNNNNNNTCC	2 cut(s)	818, 850
AluBI	AGCT	4 cut(s)	430, 740, 781, 905
AluI	AGCT	4 cut(s)	430, 740, 781, 905
Alw21I	GWGCWC	1 cut(s)	432
Alw26I	GTCTC	2 cut(s)	505, 1040
AlwI	GGATC	2 cut(s)	1062, 1075
AlwNI	CAGNNNCTG	2 cut(s)	341, 883
Aor13HI	TCCGGA	1 cut(s)	1058
AoxI	GGCC	4 cut(s)	287, 374, 403, 416
ApaI	GGGCCC	2 cut(s)	378, 420
ApeKI	GCWGC	3 cut(s)	341, 589, 797
ApoI	RAATTY	2 cut(s)	128, 845
ArsI	GACNNNNNNTTYG	2 cut(s)	711, 743
AsiGI	ACCGGT	1 cut(s)	695
AspLEI	GCGC	1 cut(s)	185
AspS9I	GGNCC	6 cut(s)	304, 374, 375, 404, 416, 417
AsuHPI	GGTGA	1 cut(s)	214
AsuII	TTCGAA	1 cut(s)	581
AvaII	GGWCC	1 cut(s)	304
BaeGI	GKGCMC	2 cut(s)	378, 420
BamHI	GGATCC	1 cut(s)	1067
BanI	GGYRCC	2 cut(s)	244, 688
BanII	GRGCYC	3 cut(s)	378, 420, 432
BauI	CACGAG	2 cut(s)	369, 871
BbsI	GAAGAC	1 cut(s)	491
Bbv12I	GWGCWC	1 cut(s)	432
BbvI	GCAGC	3 cut(s)	328, 576, 784
BccI	CCATC	3 cut(s)	193, 523, 1108
BceAI	ACGGC	1 cut(s)	910
BcgI	CGANNNNNNTGC	4 cut(s)	571, 605, 862, 896
BciT130I	CCWGG	2 cut(s)	291, 408
BclI	TGATCA	1 cut(s)	381
BcoDI	GTCTC	2 cut(s)	505, 1040
BisI	GCNGC	5 cut(s)	330, 333, 342, 590, 798
BlsI	GCNGC	5 cut(s)	331, 334, 343, 591, 799
Bme1390I	CCNGG	2 cut(s)	291, 408
Bme18I	GGWCC	1 cut(s)	304
BmgBI	CACGTC	1 cut(s)	947
BmgT120I	GGNCC	6 cut(s)	304, 374, 375, 404, 416, 417
BmiI	GGNNCC	8 cut(s)	246, 252, 376, 418, 419, 498, 690, 1069
BmrFI	CCNGG	2 cut(s)	291, 408
BmsI	GCATC	4 cut(s)	559, 636, 955, 964
BpiI	GAAGAC	1 cut(s)	491
BpmI	CTGGAG	1 cut(s)	681
Bpu14I	TTCGAA	1 cut(s)	581
BpuEI	CTTGAG	1 cut(s)	729
Bsa29I	ATCGAT	1 cut(s)	273
BsaBI	GATNNNNATC	1 cut(s)	386
BsaHI	GRCGYC	1 cut(s)	393
BsaI	GGTCTC	1 cut(s)	1040
BsaJI	CCNNGG	3 cut(s)	406, 768, 801
BsaWI	WCCGGW	2 cut(s)	695, 1058
Bsc4I	CCNNNNNNNGG	5 cut(s)	313, 372, 413, 456, 698
Bse118I	RCCGGY	3 cut(s)	247, 563, 695
Bse1I	ACTGG	2 cut(s)	91, 1001
Bse3DI	GCAATG	4 cut(s)	558, 646, 730, 1024
Bse8I	GATNNNNATC	1 cut(s)	386
BseAI	TCCGGA	1 cut(s)	1058
BseBI	CCWGG	2 cut(s)	291, 408
BseCI	ATCGAT	1 cut(s)	273
BseDI	CCNNGG	3 cut(s)	406, 768, 801
BseGI	GGATG	3 cut(s)	534, 970, 979
BseJI	GATNNNNATC	1 cut(s)	386
BseLI	CCNNNNNNNGG	5 cut(s)	313, 372, 413, 456, 698
BseMI	GCAATG	4 cut(s)	558, 646, 730, 1024
BseMII	CTCAG	1 cut(s)	93
BseNI	ACTGG	2 cut(s)	91, 1001
BseRI	GAGGAG	4 cut(s)	281, 355, 560, 638
BseSI	GKGCMC	2 cut(s)	378, 420
BseXI	GCAGC	3 cut(s)	328, 576, 784
BsgI	GTGCAG	1 cut(s)	527
Bsh1236I	CGCG	4 cut(s)	34, 183, 329, 785
BshFI	GGCC	4 cut(s)	289, 376, 405, 418
BshNI	GGYRCC	2 cut(s)	244, 688
BshTI	ACCGGT	1 cut(s)	695
BshVI	ATCGAT	1 cut(s)	273
BsiHKAI	GWGCWC	1 cut(s)	432
BsiSI	CCGG	4 cut(s)	248, 564, 696, 1059
BsiWI	CGTACG	1 cut(s)	50
BslI	CCNNNNNNNGG	5 cut(s)	313, 372, 413, 456, 698
BsmAI	GTCTC	2 cut(s)	505, 1040
BsmI	GAATGC	1 cut(s)	897
BsnI	GGCC	4 cut(s)	289, 376, 405, 418
Bso31I	GGTCTC	1 cut(s)	1040
Bsp119I	TTCGAA	1 cut(s)	581
Bsp120I	GGGCCC	2 cut(s)	374, 416
Bsp1286I	GDGCHC	3 cut(s)	378, 420, 432
Bsp13I	TCCGGA	1 cut(s)	1058
Bsp143I	GATC	6 cut(s)	54, 256, 270, 381, 387, 1067
BspACI	CCGC	6 cut(s)	313, 329, 332, 360, 421, 785
BspANI	GGCC	4 cut(s)	289, 376, 405, 418
BspCNI	CTCAG	1 cut(s)	92
BspDI	ATCGAT	1 cut(s)	273
BspEI	TCCGGA	1 cut(s)	1058
BspFNI	CGCG	4 cut(s)	34, 183, 329, 785
BspLI	GGNNCC	8 cut(s)	246, 252, 376, 418, 419, 498, 690, 1069
BspPI	GGATC	2 cut(s)	1062, 1075
BspQI	GCTCTTC	1 cut(s)	437
BspT104I	TTCGAA	1 cut(s)	581
BspT107I	GGYRCC	2 cut(s)	244, 688
BspTNI	GGTCTC	1 cut(s)	1040
BsrDI	GCAATG	4 cut(s)	558, 646, 730, 1024
BsrFI	RCCGGY	3 cut(s)	247, 563, 695
BsrI	ACTGG	2 cut(s)	91, 1001
BssAI	RCCGGY	3 cut(s)	247, 563, 695
BssECI	CCNNGG	3 cut(s)	406, 768, 801
BssMI	GATC	6 cut(s)	54, 256, 270, 381, 387, 1067
BssNI	GRCGYC	1 cut(s)	393
BssSI	CACGAG	2 cut(s)	369, 871
BssT1I	CCWWGG	1 cut(s)	801
Bst2BI	CACGAG	2 cut(s)	369, 871
Bst2UI	CCWGG	2 cut(s)	291, 408
Bst4CI	ACNGT	3 cut(s)	102, 1013, 1030
Bst6I	CTCTTC	1 cut(s)	437
BstACI	GRCGYC	1 cut(s)	393
BstAPI	GCANNNNNTGC	2 cut(s)	341, 974
BstBI	TTCGAA	1 cut(s)	581
BstC8I	GCNNGC	3 cut(s)	299, 783, 820
BstDEI	CTNAG	1 cut(s)	79
BstF5I	GGATG	3 cut(s)	534, 970, 979
BstFNI	CGCG	4 cut(s)	34, 183, 329, 785
BstHHI	GCGC	1 cut(s)	185
BstKTI	GATC	6 cut(s)	57, 259, 273, 384, 390, 1070
BstMAI	GTCTC	2 cut(s)	505, 1040
BstMBI	GATC	6 cut(s)	54, 256, 270, 381, 387, 1067
BstMWI	GCNNNNNNNGC	6 cut(s)	338, 341, 505, 746, 874, 974
BstNI	CCWGG	2 cut(s)	291, 408
BstNSI	RCATGY	2 cut(s)	301, 476
BstSCI	CCNGG	2 cut(s)	289, 406
BstSLI	GKGCMC	2 cut(s)	378, 420
BstUI	CGCG	4 cut(s)	34, 183, 329, 785
BstV1I	GCAGC	3 cut(s)	328, 576, 784
BstV2I	GAAGAC	1 cut(s)	491
BstX2I	RGATCY	1 cut(s)	1067
BstYI	RGATCY	1 cut(s)	1067
Bsu15I	ATCGAT	1 cut(s)	273
BsuRI	GGCC	4 cut(s)	289, 376, 405, 418
BsuTUI	ATCGAT	1 cut(s)	273
BtrI	CACGTC	1 cut(s)	947
BtsCI	GGATG	3 cut(s)	534, 970, 979
BtsI	GCAGTG	1 cut(s)	342
BtsIMutI	CAGTG	1 cut(s)	342
Cac8I	GCNNGC	3 cut(s)	299, 783, 820
CaiI	CAGNNNCTG	2 cut(s)	341, 883
CfoI	GCGC	1 cut(s)	185
Cfr10I	RCCGGY	3 cut(s)	247, 563, 695
Cfr13I	GGNCC	6 cut(s)	304, 374, 375, 404, 416, 417
ClaI	ATCGAT	1 cut(s)	273
CseI	GACGC	1 cut(s)	335
Csp6I	GTAC	1 cut(s)	51
CspAI	ACCGGT	1 cut(s)	695
CviAII	CATG	4 cut(s)	298, 379, 473, 730
CviQI	GTAC	1 cut(s)	51
DdeI	CTNAG	1 cut(s)	79
DpnI	GATC	6 cut(s)	56, 258, 272, 383, 389, 1069
DpnII	GATC	6 cut(s)	54, 256, 270, 381, 387, 1067
Eam1104I	CTCTTC	1 cut(s)	437
EarI	CTCTTC	1 cut(s)	437
EciI	GGCGGA	1 cut(s)	349
Ecl136II	GAGCTC	1 cut(s)	430
Eco130I	CCWWGG	1 cut(s)	801
Eco24I	GRGCYC	3 cut(s)	378, 420, 432
Eco31I	GGTCTC	1 cut(s)	1040
Eco47I	GGWCC	1 cut(s)	304
Eco53kI	GAGCTC	1 cut(s)	430
Eco57I	CTGAAG	2 cut(s)	777, 927
EcoICRI	GAGCTC	1 cut(s)	430
EcoO109I	RGGNCCY	1 cut(s)	417
EcoRII	CCWGG	2 cut(s)	289, 406
EcoT14I	CCWWGG	1 cut(s)	801
EcoT22I	ATGCAT	1 cut(s)	970
EcoT38I	GRGCYC	3 cut(s)	378, 420, 432
ErhI	CCWWGG	1 cut(s)	801
FaeI	CATG	4 cut(s)	301, 382, 476, 733
FaiI	YATR	6 cut(s)	197, 299, 380, 464, 474, 731
FalI	AAGNNNNNCTT	2 cut(s)	103, 135
FatI	CATG	4 cut(s)	297, 378, 472, 729
FauI	CCCGC	2 cut(s)	306, 428
FbaI	TGATCA	1 cut(s)	381
Fnu4HI	GCNGC	5 cut(s)	330, 333, 342, 590, 798
FokI	GGATG	3 cut(s)	541, 977, 986
FriOI	GRGCYC	3 cut(s)	378, 420, 432
Fsp4HI	GCNGC	5 cut(s)	330, 333, 342, 590, 798
GlaI	GCGC	1 cut(s)	184
GluI	GCNGC	5 cut(s)	330, 333, 342, 590, 798
GsuI	CTGGAG	1 cut(s)	681
HaeIII	GGCC	4 cut(s)	289, 376, 405, 418
HapII	CCGG	4 cut(s)	248, 564, 696, 1059
HgaI	GACGC	1 cut(s)	335
HhaI	GCGC	1 cut(s)	185
Hin1I	GRCGYC	1 cut(s)	393
Hin1II	CATG	4 cut(s)	301, 382, 476, 733
Hin6I	GCGC	1 cut(s)	183
HinP1I	GCGC	1 cut(s)	183
HincII	GTYRAC	3 cut(s)	676, 1006, 1089
HindII	GTYRAC	3 cut(s)	676, 1006, 1089
HindIII	AAGCTT	1 cut(s)	738
HpaI	GTTAAC	1 cut(s)	1006
HpaII	CCGG	4 cut(s)	248, 564, 696, 1059
HphI	GGTGA	1 cut(s)	214
Hpy166II	GTNNAC	3 cut(s)	676, 1006, 1089
Hpy188I	TCNGA	7 cut(s)	216, 228, 234, 240, 261, 764, 838
Hpy8I	GTNNAC	3 cut(s)	676, 1006, 1089
Hpy99I	CGWCG	4 cut(s)	106, 395, 398, 948
HpyAV	CCTTC	6 cut(s)	126, 162, 235, 529, 577, 902
HpyCH4III	ACNGT	3 cut(s)	102, 1013, 1030
HpyCH4IV	ACGT	3 cut(s)	393, 946, 1085
HpyCH4V	TGCA	3 cut(s)	508, 925, 968
HpyF10VI	GCNNNNNNNGC	6 cut(s)	338, 341, 505, 746, 874, 974
HpyF3I	CTNAG	1 cut(s)	79
HpySE526I	ACGT	3 cut(s)	393, 946, 1085
Hsp92I	GRCGYC	1 cut(s)	393
Hsp92II	CATG	4 cut(s)	301, 382, 476, 733
HspAI	GCGC	1 cut(s)	183
Kpn2I	TCCGGA	1 cut(s)	1058
Ksp22I	TGATCA	1 cut(s)	381
KspAI	GTTAAC	1 cut(s)	1006
Kzo9I	GATC	6 cut(s)	54, 256, 270, 381, 387, 1067
LguI	GCTCTTC	1 cut(s)	437
LmnI	GCTCC	2 cut(s)	496, 547
Lsp1109I	GCAGC	3 cut(s)	328, 576, 784
LweI	GCATC	4 cut(s)	559, 636, 955, 964
MaeII	ACGT	3 cut(s)	393, 946, 1085
MaeIII	GTNAC	2 cut(s)	1024, 1030
MalI	GATC	6 cut(s)	56, 258, 272, 383, 389, 1069
MboI	GATC	6 cut(s)	54, 256, 270, 381, 387, 1067
MboII	GAAGA	7 cut(s)	329, 424, 478, 496, 583, 926, 1095
MfeI	CAATTG	1 cut(s)	750
MflI	RGATCY	1 cut(s)	1067
MhlI	GDGCHC	3 cut(s)	378, 420, 432
MluCI	AATT	6 cut(s)	128, 490, 577, 750, 845, 887
MluI	ACGCGT	1 cut(s)	32
MlyI	GAGTC	5 cut(s)	167, 507, 660, 681, 1049
MmeI	TCCRAC	2 cut(s)	691, 1045
Mph1103I	ATGCAT	1 cut(s)	970
MroI	TCCGGA	1 cut(s)	1058
MseI	TTAA	3 cut(s)	24, 42, 1005
MspI	CCGG	4 cut(s)	248, 564, 696, 1059
MspR9I	CCNGG	2 cut(s)	291, 408
MunI	CAATTG	1 cut(s)	750
Mva1269I	GAATGC	1 cut(s)	897
MvaI	CCWGG	2 cut(s)	291, 408
MvnI	CGCG	4 cut(s)	34, 183, 329, 785
MwoI	GCNNNNNNNGC	6 cut(s)	338, 341, 505, 746, 874, 974
NdeII	GATC	6 cut(s)	54, 256, 270, 381, 387, 1067
NlaIII	CATG	4 cut(s)	301, 382, 476, 733
NlaIV	GGNNCC	8 cut(s)	246, 252, 376, 418, 419, 498, 690, 1069
NmeAIII	GCCGAG	2 cut(s)	381, 793
NmuCI	GTSAC	1 cut(s)	1024
NsiI	ATGCAT	1 cut(s)	970
NspI	RCATGY	2 cut(s)	301, 476
NspV	TTCGAA	1 cut(s)	581
PaeI	GCATGC	1 cut(s)	301
PciSI	GCTCTTC	1 cut(s)	437
PcsI	WCGNNNNNNNCGW	2 cut(s)	270, 834
PctI	GAATGC	1 cut(s)	897
PfeI	GAWTC	5 cut(s)	178, 223, 229, 235, 1075
Pfl23II	CGTACG	1 cut(s)	50
PflMI	CCANNNNNTGG	1 cut(s)	698
PinAI	ACCGGT	1 cut(s)	695
PkrI	GCNGC	5 cut(s)	331, 334, 343, 591, 799
PleI	GAGTC	5 cut(s)	167, 507, 659, 680, 1049
PpsI	GAGTC	5 cut(s)	167, 507, 659, 680, 1049
Psp124BI	GAGCTC	1 cut(s)	432
Psp6I	CCWGG	2 cut(s)	289, 406
PspGI	CCWGG	2 cut(s)	289, 406
PspLI	CGTACG	1 cut(s)	50
PspN4I	GGNNCC	8 cut(s)	246, 252, 376, 418, 419, 498, 690, 1069
PspOMI	GGGCCC	2 cut(s)	374, 416
PspPI	GGNCC	6 cut(s)	304, 374, 375, 404, 416, 417
PstNI	CAGNNNCTG	2 cut(s)	341, 883
PsuI	RGATCY	1 cut(s)	1067
RsaI	GTAC	1 cut(s)	52
RsaNI	GTAC	1 cut(s)	51
SacI	GAGCTC	1 cut(s)	432
SapI	GCTCTTC	1 cut(s)	437
SaqAI	TTAA	3 cut(s)	24, 42, 1005
SatI	GCNGC	5 cut(s)	330, 333, 342, 590, 798
Sau3AI	GATC	6 cut(s)	54, 256, 270, 381, 387, 1067
Sau96I	GGNCC	6 cut(s)	304, 374, 375, 404, 416, 417
SchI	GAGTC	5 cut(s)	167, 507, 660, 681, 1049
ScrFI	CCNGG	2 cut(s)	291, 408
SduI	GDGCHC	3 cut(s)	378, 420, 432
SfaNI	GCATC	4 cut(s)	559, 636, 955, 964
SfuI	TTCGAA	1 cut(s)	581
SinI	GGWCC	1 cut(s)	304
SmlI	CTYRAG	1 cut(s)	744
SmoI	CTYRAG	1 cut(s)	744
SphI	GCATGC	1 cut(s)	301
Sse9I	AATT	6 cut(s)	128, 490, 577, 750, 845, 887
SsiI	CCGC	6 cut(s)	313, 329, 332, 360, 421, 785
SstI	GAGCTC	1 cut(s)	432
StyD4I	CCNGG	2 cut(s)	289, 406
StyI	CCWWGG	1 cut(s)	801
TaaI	ACNGT	3 cut(s)	102, 1013, 1030
TaiI	ACGT	3 cut(s)	396, 949, 1088
TaqI	TCGA	9 cut(s)	104, 134, 161, 176, 273, 390, 581, 670, 1137
TasI	AATT	6 cut(s)	128, 490, 577, 750, 845, 887
TauI	GCSGC	2 cut(s)	332, 335
TfiI	GAWTC	5 cut(s)	178, 223, 229, 235, 1075
Tru1I	TTAA	3 cut(s)	24, 42, 1005
Tru9I	TTAA	3 cut(s)	24, 42, 1005
TscAI	CASTG	1 cut(s)	342
TseFI	GTSAC	1 cut(s)	1024
TseI	GCWGC	3 cut(s)	341, 589, 797
Tsp45I	GTSAC	1 cut(s)	1024
TspDTI	ATGAA	1 cut(s)	479
TspGWI	ACGGA	1 cut(s)	28
TspRI	CASTG	1 cut(s)	342
Van91I	CCANNNNNTGG	1 cut(s)	698
VpaK11BI	GGWCC	1 cut(s)	304
XapI	RAATTY	2 cut(s)	128, 845
XceI	RCATGY	2 cut(s)	301, 476
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1122
ZraI	GACGTC	1 cut(s)	394
Zsp2I	ATGCAT	1 cut(s)	970

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.