RLG00000009417

BAG family molecular chaperone regulator

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0002445
Physical Location & Seq
Forward (+)
52570975 .. 52571569
595 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000009417

Sequence Viewer

Length: 339 bp
ATGTTCGTGCAGCGGTGCGACTGTGATGACACTGTCGCCACTCGTAGGCCCATCATCACGATCCACATCTCTCACGGCCAGGCCCATCACGTCTTTAACCTCCCGGCCCACTCCAGCTTCAGGGAATTGAAGGGACTTGTTTCACAGAAGACCGGGGTAGAGCTGGAGGAGCAGAAGTTGTTGTTCAAGGGGAAAGAGAAGGAGGATGAGGAGCATTTAGACGCGGCGGGTGTGAAGGATAATTCCAGGGTTATGCTCTTGCAGGAACAGAAAAGGAAAGAGAGGAGCGTCGGGGAGTTGAATGAGAGCAGTGAGATGTTGACTGTAGGCTGTGGATGA

Protein Analysis

113

Amino Acids

12.66

Weight (kDa)

6.06

Isoelectric Point (pI)

48.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ubiquitin PF00240 20 - 90 5.1e-12 Ubiquitin family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 224
AciI CCGC 3 cut(s) 13, 224, 227
AclWI GGATC 1 cut(s) 55
AcoI YGGCCR 1 cut(s) 76
AcuI CTGAAG 1 cut(s) 103
AfiI CCNNNNNNNGG 2 cut(s) 45, 120
AgsI TTSAA 3 cut(s) 130, 187, 301
AjiI CACGTC 1 cut(s) 91
AjnI CCWGG 2 cut(s) 78, 245
AluBI AGCT 2 cut(s) 117, 163
AluI AGCT 2 cut(s) 117, 163
AlwI GGATC 1 cut(s) 55
AoxI GGCC 4 cut(s) 47, 76, 81, 105
ApeKI GCWGC 1 cut(s) 10
AspS9I GGNCC 3 cut(s) 48, 82, 106
AsuC2I CCSGG 2 cut(s) 104, 154
BbsI GAAGAC 1 cut(s) 155
BbvI GCAGC 1 cut(s) 22
BccI CCATC 2 cut(s) 59, 93
BceAI ACGGC 1 cut(s) 91
BciT130I CCWGG 2 cut(s) 80, 247
BcnI CCSGG 2 cut(s) 104, 154
BfmI CTRYAG 1 cut(s) 324
BisI GCNGC 2 cut(s) 11, 225
BlsI GCNGC 2 cut(s) 12, 226
Bme1390I CCNGG 4 cut(s) 80, 104, 154, 247
BmgBI CACGTC 1 cut(s) 91
BmgT120I GGNCC 3 cut(s) 48, 82, 106
BmrFI CCNGG 4 cut(s) 80, 104, 154, 247
BpiI GAAGAC 1 cut(s) 155
BpmI CTGGAG 2 cut(s) 97, 185
BpuMI CCSGG 2 cut(s) 104, 154
BsaBI GATNNNNATC 1 cut(s) 65
BsaJI CCNNGG 2 cut(s) 153, 246
BsaXI ACNNNNNCTCC 2 cut(s) 161, 191
Bsc4I CCNNNNNNNGG 2 cut(s) 45, 120
Bse8I GATNNNNATC 1 cut(s) 65
BseBI CCWGG 2 cut(s) 80, 247
BseDI CCNNGG 2 cut(s) 153, 246
BseGI GGATG 1 cut(s) 211
BseJI GATNNNNATC 1 cut(s) 65
BseLI CCNNNNNNNGG 2 cut(s) 45, 120
BseRI GAGGAG 3 cut(s) 182, 224, 298
BseXI GCAGC 1 cut(s) 22
BsgI GTGCAG 1 cut(s) 29
Bsh1236I CGCG 1 cut(s) 224
BshFI GGCC 4 cut(s) 49, 78, 83, 107
BsiSI CCGG 2 cut(s) 104, 153
BslFI GGGAC 1 cut(s) 147
BslI CCNNNNNNNGG 2 cut(s) 45, 120
BsmFI GGGAC 1 cut(s) 147
BsnI GGCC 4 cut(s) 49, 78, 83, 107
Bsp143I GATC 1 cut(s) 60
BspACI CCGC 3 cut(s) 13, 224, 227
BspANI GGCC 4 cut(s) 49, 78, 83, 107
BspFNI CGCG 1 cut(s) 224
BspPI GGATC 1 cut(s) 55
BssECI CCNNGG 2 cut(s) 153, 246
BssMI GATC 1 cut(s) 60
Bst2UI CCWGG 2 cut(s) 80, 247
Bst4CI ACNGT 3 cut(s) 23, 34, 325
BstF5I GGATG 1 cut(s) 211
BstFNI CGCG 1 cut(s) 224
BstKTI GATC 1 cut(s) 63
BstMBI GATC 1 cut(s) 60
BstMWI GCNNNNNNNGC 1 cut(s) 169
BstNI CCWGG 2 cut(s) 80, 247
BstSCI CCNGG 4 cut(s) 78, 102, 152, 245
BstSFI CTRYAG 1 cut(s) 324
BstUI CGCG 1 cut(s) 224
BstV1I GCAGC 1 cut(s) 22
BstV2I GAAGAC 1 cut(s) 155
BsuRI GGCC 4 cut(s) 49, 78, 83, 107
BtrI CACGTC 1 cut(s) 91
BtsCI GGATG 1 cut(s) 211
BtsI GCAGTG 1 cut(s) 316
BtsIMutI CAGTG 2 cut(s) 30, 316
Cfr13I GGNCC 3 cut(s) 48, 82, 106
CseI GACGC 2 cut(s) 230, 277
CviJI RGCY 7 cut(s) 49, 78, 83, 107, 117, 163, 330
CviKI_1 RGCY 7 cut(s) 49, 78, 83, 107, 117, 163, 330
DpnI GATC 1 cut(s) 62
DpnII GATC 1 cut(s) 60
EaeI YGGCCR 1 cut(s) 76
Eco57I CTGAAG 1 cut(s) 103
EcoRII CCWGG 2 cut(s) 78, 245
FaiI YATR 1 cut(s) 254
FaqI GGGAC 1 cut(s) 147
FauI CCCGC 1 cut(s) 220
Fnu4HI GCNGC 2 cut(s) 11, 225
FokI GGATG 1 cut(s) 218
Fsp4HI GCNGC 2 cut(s) 11, 225
GluI GCNGC 2 cut(s) 11, 225
GsuI CTGGAG 2 cut(s) 97, 185
HaeIII GGCC 4 cut(s) 49, 78, 83, 107
HapII CCGG 2 cut(s) 104, 153
HgaI GACGC 2 cut(s) 230, 277
HincII GTYRAC 1 cut(s) 321
HindII GTYRAC 1 cut(s) 321
HpaII CCGG 2 cut(s) 104, 153
Hpy166II GTNNAC 1 cut(s) 321
Hpy188III TCNNGA 1 cut(s) 58
Hpy8I GTNNAC 1 cut(s) 321
Hpy99I CGWCG 1 cut(s) 293
HpyAV CCTTC 3 cut(s) 124, 193, 229
HpyCH4III ACNGT 3 cut(s) 23, 34, 325
HpyCH4IV ACGT 1 cut(s) 90
HpyCH4V TGCA 2 cut(s) 10, 262
HpyF10VI GCNNNNNNNGC 1 cut(s) 169
HpySE526I ACGT 1 cut(s) 90
Kzo9I GATC 1 cut(s) 60
LmnI GCTCC 3 cut(s) 169, 211, 285
Lsp1109I GCAGC 1 cut(s) 22
MaeII ACGT 1 cut(s) 90
MalI GATC 1 cut(s) 62
MboI GATC 1 cut(s) 60
MboII GAAGA 1 cut(s) 160
MluCI AATT 2 cut(s) 125, 241
MnlI CCTC 5 cut(s) 110, 160, 196, 202, 276
MseI TTAA 1 cut(s) 96
MspA1I CMGCKG 1 cut(s) 13
MspI CCGG 2 cut(s) 104, 153
MspR9I CCNGG 4 cut(s) 80, 104, 154, 247
MvaI CCWGG 2 cut(s) 80, 247
MvnI CGCG 1 cut(s) 224
MwoI GCNNNNNNNGC 1 cut(s) 169
NciI CCSGG 2 cut(s) 104, 154
NdeII GATC 1 cut(s) 60
PflFI GACNNNGTC 1 cut(s) 32
PkrI GCNGC 2 cut(s) 12, 226
Psp6I CCWGG 2 cut(s) 78, 245
PspGI CCWGG 2 cut(s) 78, 245
PspPI GGNCC 3 cut(s) 48, 82, 106
PsyI GACNNNGTC 1 cut(s) 32
SaqAI TTAA 1 cut(s) 96
SatI GCNGC 2 cut(s) 11, 225
Sau3AI GATC 1 cut(s) 60
Sau96I GGNCC 3 cut(s) 48, 82, 106
ScrFI CCNGG 4 cut(s) 80, 104, 154, 247
SetI ASST 4 cut(s) 93, 102, 119, 165
SfcI CTRYAG 1 cut(s) 324
Sse9I AATT 2 cut(s) 125, 241
SsiI CCGC 3 cut(s) 13, 224, 227
StyD4I CCNGG 4 cut(s) 78, 102, 152, 245
TaaI ACNGT 3 cut(s) 23, 34, 325
TaiI ACGT 1 cut(s) 93
TasI AATT 2 cut(s) 125, 241
TauI GCSGC 1 cut(s) 227
Tru1I TTAA 1 cut(s) 96
Tru9I TTAA 1 cut(s) 96
TscAI CASTG 2 cut(s) 37, 316
TseI GCWGC 1 cut(s) 10
TspRI CASTG 2 cut(s) 37, 316
Tth111I GACNNNGTC 1 cut(s) 32
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.