Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr12

Orthogroup ID

OG0003276

Physical Location & Seq

Genomic Coordinates Reverse (-)

25979958 .. 25981718

Gene Structure 1761 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD12G1179500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1260 bp

ATGGCGTCCGAGGCTTCCGACGGGGATAGGAAATTGCGGAAGAGGCGCTACGGGTGCGATTCGATAGAGGACACTCTGGCTAGGTGGAAGAACTACAATGAGAGGCTTGATTTTGAAAAAGATGGAGGGAAGAAGACTCGGAGGGTTCCCGCGAAGGGCTCCACAAAAGGGTGTATGAGAGGGAAAGGAGGGCCTGAGAACTCCGCTTGTGTTTACAGGGGTGTTAGGCAGAGGACTTGGGGAAAATGGGTGGCGGAAATCCGAGAACCGATTCACGCTACAGGCGGCGCTGTACCGAAGAAGAAGAATAACCGTCTTTGGCTTGGGACTTTCCCTACAGCCTGGGAAGCTGCACTTGCTTATGATAAAGCTGCTTGGGCAATTTATGGTGCTTCGGCCCGGCTCAACTTCGCAAAGAACACCATGGATTTGAAGGACTCCTGCTCTAATTTTGTGTCACCCACAACGACTAAACCATCGTCCTACGAGTCATCGTCAACATATAACAGTGCGGATCAGGCAAAGGAAAGATCGGGTTTCTTTGAGGACTGTCTGCCCGGAGAGCCGAAGCAGGAAATGGTTTGTGCTGTGGGATTGGTGACTGAGGAATTAGAGCTTTCCAATGCTACCTTAAGAGACGGTTGCAACCCTTCAAATGATGTCAAATTTGAGACACCGGCAATGAGGGAAGCAGTGGTGAAAGAGTTCCCGGTGATTCTGGAATCTGGAAGCCAAAATGGCTTAGATGATATGTACAACAATATGCATAACGAGCAGAAAAATGTTCAATCTGATGATGCTGGAATGAAGGGATCGATAACTGGTCAACAATTGCAGGGAGGTTTAGCAGAAACTACGAAATTAAATGGCCATAATCACGATGGCTTCATACATACTTATGCTTACTTAGATGACTTAGACGATAAGTACAACAATAGTCCAGGTTATGGCATCAATGCATCGAATGACATCGGAATGCAGAGGGAGCTCTACGACAGACTTGACTACATGCATAACTGCTGGTCTGCAGAAAAAACCTATGGCATTGATGCTGCTCAAGAACAACAATGGGAGAGGATGATGCATTGTCTCCCTATACAATTTCAGACACAACCACAAGTCGACATACCTGGAAGCTCGAATCATACGCAGGACGGATATTTAGACGTGGATTTCGATTCAGATTTAGTTAGACAAAGCTATCATTCCGGTGTAATGGAAGAGCAGGGGCTGCATTATTCATGGTTCCCTTACTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009266 GO:0009408 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010035 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033554 GO:0034605 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

420

Amino Acids

47.05

Weight (kDa)

5.41

Isoelectric Point (pI)

49.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	70 - 130	4.9e-11	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003276)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g10690
malus_domestica	MD04G1165400.v1.1 MD12G1179500.v1.1
prunus_persica	Prupe.6G284400_v2.0.a1 Prupe.6G284400_v2.0.a1
pyrus_communis	pycom04g14750 pycom12g16930
rosa_chinensis	RchiOBHm_Chr3g0461691 RchiOBHm_Chr6g0312551
rosa_laevigata	RLG00000010317 RLG00000024905
rosa_multiflora	Rmu_co8045116.1_g000001 Rmu_co8349119.1_g000001 Rmu_sc0003094.1_g000012 Rmu_sc0008363.1_g000007 Rmu_sc0038320.1_g000002
rosa_roxburghii	Rroxscaffold_1G00048580 Rroxscaffold_2G00101990 Rroxscaffold_4G00310750 Rroxscaffold_6G00418040
rosa_rugosa	Rorug05G0531400 Rorug05G0531400 Rorug06G0396500
rosa_samantha	Rh3AG111200 Rh3BG114200 Rh3CG116400 Rh3DG116100 Rh4DG219100 Rh6AG513900 Rh6AG514000 Rh6BG525800 Rh6BG525900 Rh6CG530900 Rh6CG531000 Rh6DG516200 Rh6DG516300
rosa_wichuraiana	Rw3G009410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	947
AccI	GTMKAC	1 cut(s)	1122
AccII	CGCG	1 cut(s)	152
AciI	CCGC	6 cut(s)	37, 150, 204, 254, 285, 512
AclWI	GGATC	2 cut(s)	522, 820
AcoI	YGGCCR	1 cut(s)	868
AcsI	RAATTY	1 cut(s)	665
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	3 cut(s)	294, 755, 929
AfiI	CCNNNNNNNGG	3 cut(s)	155, 168, 947
AflII	CTTAAG	1 cut(s)	631
AgsI	TTSAA	4 cut(s)	116, 433, 654, 788
AjiI	CACGTC	1 cut(s)	1168
AjnI	CCWGG	3 cut(s)	341, 940, 1129
AluBI	AGCT	6 cut(s)	350, 371, 616, 988, 1137, 1200
AluI	AGCT	6 cut(s)	350, 371, 616, 988, 1137, 1200
Alw21I	GWGCWC	1 cut(s)	990
Alw26I	GTCTC	3 cut(s)	630, 665, 1094
AlwI	GGATC	2 cut(s)	522, 820
AlwNI	CAGNNNCTG	1 cut(s)	1231
AoxI	GGCC	3 cut(s)	191, 396, 868
ApeKI	GCWGC	4 cut(s)	350, 371, 1052, 1231
ApoI	RAATTY	1 cut(s)	665
ArsI	GACNNNNNNTTYG	2 cut(s)	1157, 1189
Asp700I	GAANNNNTTC	2 cut(s)	270, 704
AspLEI	GCGC	2 cut(s)	48, 290
AspS9I	GGNCC	2 cut(s)	191, 397
AsuC2I	CCSGG	3 cut(s)	400, 558, 710
AsuHPI	GGTGA	4 cut(s)	450, 610, 709, 724
BalI	TGGCCA	1 cut(s)	870
BanII	GRGCYC	2 cut(s)	161, 990
BarI	GAAGNNNNNNTAC	2 cut(s)	32, 64
BbsI	GAAGAC	1 cut(s)	140
Bbv12I	GWGCWC	1 cut(s)	990
BbvI	GCAGC	4 cut(s)	337, 358, 1039, 1218
BccI	CCATC	3 cut(s)	116, 484, 875
BciT130I	CCWGG	3 cut(s)	343, 942, 1131
BcnI	CCSGG	3 cut(s)	400, 558, 710
BcoDI	GTCTC	3 cut(s)	630, 665, 1094
BfaI	CTAG	1 cut(s)	81
BfmI	CTRYAG	3 cut(s)	279, 336, 1026
BfoI	RGCGCY	2 cut(s)	49, 291
BfrI	CTTAAG	1 cut(s)	631
BglI	GCCNNNNNGGC	1 cut(s)	738
BisI	GCNGC	5 cut(s)	286, 351, 372, 1053, 1232
BlsI	GCNGC	5 cut(s)	287, 352, 373, 1054, 1233
Bme1390I	CCNGG	6 cut(s)	343, 400, 558, 710, 942, 1131
BmgBI	CACGTC	1 cut(s)	1168
BmgT120I	GGNCC	2 cut(s)	191, 397
BmiI	GGNNCC	3 cut(s)	147, 160, 1247
BmrFI	CCNGG	6 cut(s)	343, 400, 558, 710, 942, 1131
BmsI	GCATC	5 cut(s)	787, 960, 968, 1039, 1071
BpiI	GAAGAC	1 cut(s)	140
BpuEI	CTTGAG	1 cut(s)	1041
BpuMI	CCSGG	3 cut(s)	400, 558, 710
Bsa29I	ATCGAT	1 cut(s)	815
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	3 cut(s)	9, 342, 423
BsaWI	WCCGGW	1 cut(s)	1208
Bsc4I	CCNNNNNNNGG	3 cut(s)	155, 168, 947
Bse118I	RCCGGY	1 cut(s)	676
Bse1I	ACTGG	1 cut(s)	826
Bse3DI	GCAATG	1 cut(s)	687
BseBI	CCWGG	3 cut(s)	343, 942, 1131
BseCI	ATCGAT	1 cut(s)	815
BseDI	CCNNGG	3 cut(s)	9, 342, 423
BseGI	GGATG	1 cut(s)	1083
BseLI	CCNNNNNNNGG	3 cut(s)	155, 168, 947
BseMI	GCAATG	1 cut(s)	687
BseMII	CTCAG	2 cut(s)	186, 594
BseNI	ACTGG	1 cut(s)	826
BseXI	GCAGC	4 cut(s)	337, 358, 1039, 1218
BsgI	GTGCAG	1 cut(s)	336
Bsh1236I	CGCG	1 cut(s)	152
BshFI	GGCC	3 cut(s)	193, 398, 870
BshVI	ATCGAT	1 cut(s)	815
BsiHKAI	GWGCWC	1 cut(s)	990
BsiSI	CCGG	5 cut(s)	400, 558, 677, 710, 1209
BslFI	GGGAC	1 cut(s)	340
BslI	CCNNNNNNNGG	3 cut(s)	155, 168, 947
BsmAI	GTCTC	3 cut(s)	630, 665, 1094
BsmBI	CGTCTC	1 cut(s)	630
BsmFI	GGGAC	1 cut(s)	340
BsmI	GAATGC	1 cut(s)	981
BsnI	GGCC	3 cut(s)	193, 398, 870
Bsp1286I	GDGCHC	2 cut(s)	161, 990
Bsp1407I	TGTACA	1 cut(s)	753
Bsp143I	GATC	3 cut(s)	514, 530, 812
Bsp19I	CCATGG	1 cut(s)	423
BspACI	CCGC	6 cut(s)	37, 150, 204, 254, 285, 512
BspANI	GGCC	3 cut(s)	193, 398, 870
BspCNI	CTCAG	2 cut(s)	187, 595
BspDI	ATCGAT	1 cut(s)	815
BspFNI	CGCG	1 cut(s)	152
BspLI	GGNNCC	3 cut(s)	147, 160, 1247
BspMAI	CTGCAG	1 cut(s)	1030
BspPI	GGATC	2 cut(s)	522, 820
BspQI	GCTCTTC	1 cut(s)	1215
BspTI	CTTAAG	1 cut(s)	631
BsrDI	GCAATG	1 cut(s)	687
BsrFI	RCCGGY	1 cut(s)	676
BsrGI	TGTACA	1 cut(s)	753
BsrI	ACTGG	1 cut(s)	826
BssAI	RCCGGY	1 cut(s)	676
BssECI	CCNNGG	3 cut(s)	9, 342, 423
BssMI	GATC	3 cut(s)	514, 530, 812
BssNI	GRCGYC	1 cut(s)	5
BssT1I	CCWWGG	1 cut(s)	423
Bst2UI	CCWGG	3 cut(s)	343, 942, 1131
Bst4CI	ACNGT	4 cut(s)	314, 509, 551, 641
Bst6I	CTCTTC	2 cut(s)	35, 1215
BstACI	GRCGYC	1 cut(s)	5
BstAFI	CTTAAG	1 cut(s)	631
BstAPI	GCANNNNNTGC	1 cut(s)	1231
BstAUI	TGTACA	1 cut(s)	753
BstDEI	CTNAG	6 cut(s)	195, 603, 742, 907, 916, 1257
BstDSI	CCRYGG	1 cut(s)	423
BstF5I	GGATG	1 cut(s)	1083
BstFNI	CGCG	1 cut(s)	152
BstH2I	RGCGCY	2 cut(s)	49, 291
BstHHI	GCGC	2 cut(s)	48, 290
BstKTI	GATC	3 cut(s)	517, 533, 815
BstMAI	GTCTC	3 cut(s)	630, 665, 1094
BstMBI	GATC	3 cut(s)	514, 530, 812
BstNI	CCWGG	3 cut(s)	343, 942, 1131
BstNSI	RCATGY	1 cut(s)	1012
BstSCI	CCNGG	6 cut(s)	341, 398, 556, 708, 940, 1129
BstSFI	CTRYAG	3 cut(s)	279, 336, 1026
BstUI	CGCG	1 cut(s)	152
BstV1I	GCAGC	4 cut(s)	337, 358, 1039, 1218
BstV2I	GAAGAC	1 cut(s)	140
Bsu15I	ATCGAT	1 cut(s)	815
BsuRI	GGCC	3 cut(s)	193, 398, 870
BsuTUI	ATCGAT	1 cut(s)	815
BtgI	CCRYGG	1 cut(s)	423
BtrI	CACGTC	1 cut(s)	1168
BtsCI	GGATG	1 cut(s)	1083
BtsI	GCAGTG	1 cut(s)	699
BtsIMutI	CAGTG	2 cut(s)	514, 699
CaiI	CAGNNNCTG	1 cut(s)	1231
CfoI	GCGC	2 cut(s)	48, 290
Cfr10I	RCCGGY	1 cut(s)	676
Cfr13I	GGNCC	2 cut(s)	191, 397
ClaI	ATCGAT	1 cut(s)	815
Csp6I	GTAC	3 cut(s)	293, 754, 928
CviAII	CATG	3 cut(s)	424, 1009, 1242
CviQI	GTAC	3 cut(s)	293, 754, 928
DdeI	CTNAG	6 cut(s)	195, 603, 742, 907, 916, 1257
DpnI	GATC	3 cut(s)	516, 532, 814
DpnII	GATC	3 cut(s)	514, 530, 812
EaeI	YGGCCR	1 cut(s)	868
Eam1104I	CTCTTC	2 cut(s)	35, 1215
EarI	CTCTTC	2 cut(s)	35, 1215
EciI	GGCGGA	1 cut(s)	269
Ecl136II	GAGCTC	1 cut(s)	988
Eco130I	CCWWGG	1 cut(s)	423
Eco24I	GRGCYC	2 cut(s)	161, 990
Eco53kI	GAGCTC	1 cut(s)	988
EcoICRI	GAGCTC	1 cut(s)	988
EcoO109I	RGGNCCY	1 cut(s)	191
EcoRII	CCWGG	3 cut(s)	341, 940, 1129
EcoT14I	CCWWGG	1 cut(s)	423
EcoT22I	ATGCAT	4 cut(s)	768, 961, 1014, 1086
EcoT38I	GRGCYC	2 cut(s)	161, 990
ErhI	CCWWGG	1 cut(s)	423
Esp3I	CGTCTC	1 cut(s)	630
FaeI	CATG	3 cut(s)	427, 1012, 1245
FalI	AAGNNNNNCTT	2 cut(s)	339, 371
FaqI	GGGAC	1 cut(s)	340
FatI	CATG	3 cut(s)	423, 1008, 1241
FauI	CCCGC	1 cut(s)	157
FblI	GTMKAC	1 cut(s)	1122
Fnu4HI	GCNGC	5 cut(s)	286, 351, 372, 1053, 1232
FokI	GGATG	1 cut(s)	1090
FriOI	GRGCYC	2 cut(s)	161, 990
Fsp4HI	GCNGC	5 cut(s)	286, 351, 372, 1053, 1232
FspBI	CTAG	1 cut(s)	81
GlaI	GCGC	2 cut(s)	47, 289
GluI	GCNGC	5 cut(s)	286, 351, 372, 1053, 1232
HaeII	RGCGCY	2 cut(s)	49, 291
HaeIII	GGCC	3 cut(s)	193, 398, 870
HapII	CCGG	5 cut(s)	400, 558, 677, 710, 1209
HhaI	GCGC	2 cut(s)	48, 290
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	3 cut(s)	427, 1012, 1245
Hin6I	GCGC	2 cut(s)	46, 288
HinP1I	GCGC	2 cut(s)	46, 288
HincII	GTYRAC	3 cut(s)	498, 827, 1123
HindII	GTYRAC	3 cut(s)	498, 827, 1123
HinfI	GANTC	9 cut(s)	59, 136, 271, 437, 488, 715, 722, 1141, 1178
HpaII	CCGG	5 cut(s)	400, 558, 677, 710, 1209
HphI	GGTGA	4 cut(s)	450, 610, 709, 724
Hpy166II	GTNNAC	4 cut(s)	214, 498, 827, 1123
Hpy188I	TCNGA	8 cut(s)	10, 19, 141, 263, 793, 974, 1107, 1183
Hpy188III	TCNNGA	4 cut(s)	719, 726, 878, 1058
Hpy8I	GTNNAC	4 cut(s)	214, 498, 827, 1123
Hpy99I	CGWCG	1 cut(s)	23
HpyAV	CCTTC	4 cut(s)	148, 427, 660, 802
HpyCH4III	ACNGT	4 cut(s)	314, 509, 551, 641
HpyCH4IV	ACGT	1 cut(s)	1167
HpyF3I	CTNAG	6 cut(s)	195, 603, 742, 907, 916, 1257
HpySE526I	ACGT	1 cut(s)	1167
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	3 cut(s)	427, 1012, 1245
HspAI	GCGC	2 cut(s)	46, 288
Kzo9I	GATC	3 cut(s)	514, 530, 812
LguI	GCTCTTC	1 cut(s)	1215
LmnI	GCTCC	2 cut(s)	164, 985
Lsp1109I	GCAGC	4 cut(s)	337, 358, 1039, 1218
LweI	GCATC	5 cut(s)	787, 960, 968, 1039, 1071
MaeI	CTAG	1 cut(s)	81
MaeII	ACGT	1 cut(s)	1167
MaeIII	GTNAC	2 cut(s)	456, 598
MalI	GATC	3 cut(s)	516, 532, 814
MboI	GATC	3 cut(s)	514, 530, 812
MboII	GAAGA	8 cut(s)	52, 100, 142, 145, 310, 313, 316, 1232
MfeI	CAATTG	1 cut(s)	830
MhlI	GDGCHC	2 cut(s)	161, 990
MlsI	TGGCCA	1 cut(s)	870
MluCI	AATT	8 cut(s)	32, 381, 448, 608, 665, 830, 860, 1100
MluNI	TGGCCA	1 cut(s)	870
MlyI	GAGTC	3 cut(s)	130, 431, 497
MmeI	TCCRAC	1 cut(s)	42
Mox20I	TGGCCA	1 cut(s)	870
Mph1103I	ATGCAT	4 cut(s)	768, 961, 1014, 1086
MroXI	GAANNNNTTC	2 cut(s)	270, 704
MscI	TGGCCA	1 cut(s)	870
MseI	TTAA	2 cut(s)	632, 863
MslI	CAYNNNNRTG	3 cut(s)	897, 974, 1209
Msp20I	TGGCCA	1 cut(s)	870
MspCI	CTTAAG	1 cut(s)	631
MspI	CCGG	5 cut(s)	400, 558, 677, 710, 1209
MspR9I	CCNGG	6 cut(s)	343, 400, 558, 710, 942, 1131
MunI	CAATTG	1 cut(s)	830
Mva1269I	GAATGC	1 cut(s)	981
MvaI	CCWGG	3 cut(s)	343, 942, 1131
MvnI	CGCG	1 cut(s)	152
NciI	CCSGG	3 cut(s)	400, 558, 710
NcoI	CCATGG	1 cut(s)	423
NdeII	GATC	3 cut(s)	514, 530, 812
NlaIII	CATG	3 cut(s)	427, 1012, 1245
NlaIV	GGNNCC	3 cut(s)	147, 160, 1247
NmuCI	GTSAC	2 cut(s)	456, 598
NsiI	ATGCAT	4 cut(s)	768, 961, 1014, 1086
NspI	RCATGY	1 cut(s)	1012
PciSI	GCTCTTC	1 cut(s)	1215
PcsI	WCGNNNNNNNCGW	1 cut(s)	1173
PctI	GAATGC	1 cut(s)	981
PdmI	GAANNNNTTC	2 cut(s)	270, 704
PfeI	GAWTC	6 cut(s)	59, 271, 715, 722, 1141, 1178
PflMI	CCANNNNNTGG	1 cut(s)	947
PkrI	GCNGC	5 cut(s)	287, 352, 373, 1054, 1233
PleI	GAGTC	3 cut(s)	130, 431, 496
PpsI	GAGTC	3 cut(s)	130, 431, 496
Psp124BI	GAGCTC	1 cut(s)	990
Psp6I	CCWGG	3 cut(s)	341, 940, 1129
PspGI	CCWGG	3 cut(s)	341, 940, 1129
PspN4I	GGNNCC	3 cut(s)	147, 160, 1247
PspPI	GGNCC	2 cut(s)	191, 397
PstI	CTGCAG	1 cut(s)	1030
PstNI	CAGNNNCTG	1 cut(s)	1231
RsaI	GTAC	3 cut(s)	294, 755, 929
RsaNI	GTAC	3 cut(s)	293, 754, 928
RseI	CAYNNNNRTG	3 cut(s)	897, 974, 1209
SacI	GAGCTC	1 cut(s)	990
SalI	GTCGAC	1 cut(s)	1121
SapI	GCTCTTC	1 cut(s)	1215
SaqAI	TTAA	2 cut(s)	632, 863
SatI	GCNGC	5 cut(s)	286, 351, 372, 1053, 1232
Sau3AI	GATC	3 cut(s)	514, 530, 812
Sau96I	GGNCC	2 cut(s)	191, 397
SchI	GAGTC	3 cut(s)	130, 431, 497
ScrFI	CCNGG	6 cut(s)	343, 400, 558, 710, 942, 1131
SduI	GDGCHC	2 cut(s)	161, 990
SfaNI	GCATC	5 cut(s)	787, 960, 968, 1039, 1071
SfcI	CTRYAG	3 cut(s)	279, 336, 1026
SmiMI	CAYNNNNRTG	3 cut(s)	897, 974, 1209
SmlI	CTYRAG	2 cut(s)	631, 1056
SmoI	CTYRAG	2 cut(s)	631, 1056
Sse9I	AATT	8 cut(s)	32, 381, 448, 608, 665, 830, 860, 1100
SsiI	CCGC	6 cut(s)	37, 150, 204, 254, 285, 512
SspMI	CTAG	1 cut(s)	81
SstI	GAGCTC	1 cut(s)	990
StyD4I	CCNGG	6 cut(s)	341, 398, 556, 708, 940, 1129
StyI	CCWWGG	1 cut(s)	423
TaaI	ACNGT	4 cut(s)	314, 509, 551, 641
TaiI	ACGT	1 cut(s)	1170
TaqI	TCGA	6 cut(s)	62, 815, 962, 1122, 1139, 1176
TasI	AATT	8 cut(s)	32, 381, 448, 608, 665, 830, 860, 1100
TatI	WGTACW	2 cut(s)	753, 927
TauI	GCSGC	1 cut(s)	288
TfiI	GAWTC	6 cut(s)	59, 271, 715, 722, 1141, 1178
Tru1I	TTAA	2 cut(s)	632, 863
Tru9I	TTAA	2 cut(s)	632, 863
TscAI	CASTG	2 cut(s)	514, 699
TseFI	GTSAC	2 cut(s)	456, 598
TseI	GCWGC	4 cut(s)	350, 371, 1052, 1231
Tsp45I	GTSAC	2 cut(s)	456, 598
TspDTI	ATGAA	3 cut(s)	821, 877, 1230
TspGWI	ACGGA	1 cut(s)	1170
TspRI	CASTG	2 cut(s)	514, 699
Van91I	CCANNNNNTGG	1 cut(s)	947
Vha464I	CTTAAG	1 cut(s)	631
XapI	RAATTY	1 cut(s)	665
XceI	RCATGY	1 cut(s)	1012
XcmI	CCANNNNNNNNNTGG	1 cut(s)	878
XmiI	GTMKAC	1 cut(s)	1122
XmnI	GAANNNNTTC	2 cut(s)	270, 704
XspI	CTAG	1 cut(s)	81
Zsp2I	ATGCAT	4 cut(s)	768, 961, 1014, 1086

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.