DNA-binding domain in plant proteins such as APETALA2 and EREBPs
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g10690 |
| malus_domestica | MD04G1165400.v1.1 MD12G1179500.v1.1 |
| prunus_persica | Prupe.6G284400_v2.0.a1 Prupe.6G284400_v2.0.a1 |
| pyrus_communis | pycom04g14750 pycom12g16930 |
| rosa_chinensis | RchiOBHm_Chr3g0461691 RchiOBHm_Chr6g0312551 |
| rosa_laevigata | RLG00000010317 RLG00000024905 |
| rosa_multiflora | Rmu_co8045116.1_g000001 Rmu_co8349119.1_g000001 Rmu_sc0003094.1_g000012 Rmu_sc0008363.1_g000007 Rmu_sc0038320.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00048580 Rroxscaffold_2G00101990 Rroxscaffold_4G00310750 Rroxscaffold_6G00418040 |
| rosa_rugosa | Rorug05G0531400 Rorug05G0531400 Rorug06G0396500 |
| rosa_samantha | Rh3AG111200 Rh3BG114200 Rh3CG116400 Rh3DG116100 Rh4DG219100 Rh6AG513900 Rh6AG514000 Rh6BG525800 Rh6BG525900 Rh6CG530900 Rh6CG531000 Rh6DG516200 Rh6DG516300 |
| rosa_wichuraiana | Rw3G009410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 185 |
| AccBSI | CCGCTC | 1 cut(s) | 73 |
| AciI | CCGC | 1 cut(s) | 73 |
| AfaI | GTAC | 1 cut(s) | 147 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 185 |
| AgsI | TTSAA | 2 cut(s) | 50, 201 |
| AluBI | AGCT | 1 cut(s) | 286 |
| AluI | AGCT | 1 cut(s) | 286 |
| AoxI | GGCC | 2 cut(s) | 168, 194 |
| ApeKI | GCWGC | 1 cut(s) | 286 |
| AsuHPI | GGTGA | 1 cut(s) | 10 |
| BbvI | GCAGC | 1 cut(s) | 273 |
| BciVI | GTATCC | 1 cut(s) | 132 |
| BfmI | CTRYAG | 1 cut(s) | 172 |
| BfuI | GTATCC | 1 cut(s) | 132 |
| BglII | AGATCT | 2 cut(s) | 182, 257 |
| BisI | GCNGC | 1 cut(s) | 287 |
| BlsI | GCNGC | 1 cut(s) | 288 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 185 |
| Bse1I | ACTGG | 2 cut(s) | 147, 304 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 185 |
| BseMII | CTCAG | 1 cut(s) | 273 |
| BseNI | ACTGG | 2 cut(s) | 147, 304 |
| BseXI | GCAGC | 1 cut(s) | 273 |
| BshFI | GGCC | 2 cut(s) | 170, 196 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 185 |
| BsnI | GGCC | 2 cut(s) | 170, 196 |
| Bsp143I | GATC | 2 cut(s) | 182, 257 |
| BspACI | CCGC | 1 cut(s) | 73 |
| BspANI | GGCC | 2 cut(s) | 170, 196 |
| BspCNI | CTCAG | 1 cut(s) | 274 |
| BspHI | TCATGA | 1 cut(s) | 325 |
| BsrBI | CCGCTC | 1 cut(s) | 73 |
| BsrI | ACTGG | 2 cut(s) | 147, 304 |
| BssMI | GATC | 2 cut(s) | 182, 257 |
| Bst4CI | ACNGT | 2 cut(s) | 38, 176 |
| BstDEI | CTNAG | 1 cut(s) | 282 |
| BstKTI | GATC | 2 cut(s) | 185, 260 |
| BstMBI | GATC | 2 cut(s) | 182, 257 |
| BstNSI | RCATGY | 1 cut(s) | 250 |
| BstSFI | CTRYAG | 1 cut(s) | 172 |
| BstV1I | GCAGC | 1 cut(s) | 273 |
| BstX2I | RGATCY | 2 cut(s) | 182, 257 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 67 |
| BstYI | RGATCY | 2 cut(s) | 182, 257 |
| BsuI | GTATCC | 1 cut(s) | 132 |
| BsuRI | GGCC | 2 cut(s) | 170, 196 |
| BtsIMutI | CAGTG | 1 cut(s) | 279 |
| CciI | TCATGA | 1 cut(s) | 325 |
| Csp6I | GTAC | 1 cut(s) | 146 |
| CviAII | CATG | 4 cut(s) | 149, 190, 247, 326 |
| CviJI | RGCY | 5 cut(s) | 5, 170, 196, 243, 286 |
| CviKI_1 | RGCY | 5 cut(s) | 5, 170, 196, 243, 286 |
| CviQI | GTAC | 1 cut(s) | 146 |
| DdeI | CTNAG | 1 cut(s) | 282 |
| DpnI | GATC | 2 cut(s) | 184, 259 |
| DpnII | GATC | 2 cut(s) | 182, 257 |
| Eco147I | AGGCCT | 1 cut(s) | 196 |
| EcoT22I | ATGCAT | 1 cut(s) | 252 |
| FaeI | CATG | 4 cut(s) | 152, 193, 250, 329 |
| FatI | CATG | 4 cut(s) | 148, 189, 246, 325 |
| FauI | CCCGC | 1 cut(s) | 66 |
| FauNDI | CATATG | 1 cut(s) | 274 |
| Fnu4HI | GCNGC | 1 cut(s) | 287 |
| Fsp4HI | GCNGC | 1 cut(s) | 287 |
| GluI | GCNGC | 1 cut(s) | 287 |
| HaeIII | GGCC | 2 cut(s) | 170, 196 |
| Hin1II | CATG | 4 cut(s) | 152, 193, 250, 329 |
| HinfI | GANTC | 1 cut(s) | 56 |
| HphI | GGTGA | 1 cut(s) | 10 |
| Hpy166II | GTNNAC | 1 cut(s) | 120 |
| Hpy188I | TCNGA | 1 cut(s) | 115 |
| Hpy188III | TCNNGA | 2 cut(s) | 263, 326 |
| Hpy8I | GTNNAC | 1 cut(s) | 120 |
| HpyAV | CCTTC | 1 cut(s) | 207 |
| HpyCH4III | ACNGT | 2 cut(s) | 38, 176 |
| HpyCH4V | TGCA | 3 cut(s) | 250, 289, 310 |
| HpyF3I | CTNAG | 1 cut(s) | 282 |
| Hsp92II | CATG | 4 cut(s) | 152, 193, 250, 329 |
| Kzo9I | GATC | 2 cut(s) | 182, 257 |
| LmnI | GCTCC | 1 cut(s) | 70 |
| LpnPI | CCDG | 3 cut(s) | 128, 171, 317 |
| Lsp1109I | GCAGC | 1 cut(s) | 273 |
| MalI | GATC | 2 cut(s) | 184, 259 |
| MbiI | CCGCTC | 1 cut(s) | 73 |
| MboI | GATC | 2 cut(s) | 182, 257 |
| MflI | RGATCY | 2 cut(s) | 182, 257 |
| MluCI | AATT | 1 cut(s) | 109 |
| MnlI | CCTC | 1 cut(s) | 186 |
| Mph1103I | ATGCAT | 1 cut(s) | 252 |
| MslI | CAYNNNNRTG | 1 cut(s) | 162 |
| NdeI | CATATG | 1 cut(s) | 274 |
| NdeII | GATC | 2 cut(s) | 182, 257 |
| NlaIII | CATG | 4 cut(s) | 152, 193, 250, 329 |
| NsiI | ATGCAT | 1 cut(s) | 252 |
| NspI | RCATGY | 1 cut(s) | 250 |
| PagI | TCATGA | 1 cut(s) | 325 |
| PceI | AGGCCT | 1 cut(s) | 196 |
| PfeI | GAWTC | 1 cut(s) | 56 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 185 |
| PkrI | GCNGC | 1 cut(s) | 288 |
| PsuI | RGATCY | 2 cut(s) | 182, 257 |
| RsaI | GTAC | 1 cut(s) | 147 |
| RsaNI | GTAC | 1 cut(s) | 146 |
| RseI | CAYNNNNRTG | 1 cut(s) | 162 |
| SatI | GCNGC | 1 cut(s) | 287 |
| Sau3AI | GATC | 2 cut(s) | 182, 257 |
| SetI | ASST | 2 cut(s) | 69, 288 |
| SfcI | CTRYAG | 1 cut(s) | 172 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 162 |
| Sse9I | AATT | 1 cut(s) | 109 |
| SseBI | AGGCCT | 1 cut(s) | 196 |
| SsiI | CCGC | 1 cut(s) | 73 |
| StuI | AGGCCT | 1 cut(s) | 196 |
| TaaI | ACNGT | 2 cut(s) | 38, 176 |
| TasI | AATT | 1 cut(s) | 109 |
| TfiI | GAWTC | 1 cut(s) | 56 |
| TscAI | CASTG | 1 cut(s) | 286 |
| TseI | GCWGC | 1 cut(s) | 286 |
| TspDTI | ATGAA | 3 cut(s) | 168, 282, 314 |
| TspRI | CASTG | 1 cut(s) | 286 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 185 |
| XceI | RCATGY | 1 cut(s) | 250 |
| Zsp2I | ATGCAT | 1 cut(s) | 252 |