Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr3D

Orthogroup ID

OG0003276

Physical Location & Seq

Genomic Coordinates Forward (+)

9653354 .. 9655989

Gene Structure 2636 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh3DG116100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1794 bp

ATGACGCCCAAGAGTTCAGACAGGGATAGAAAAATGGGCAAGAGGCCCAGAGTGGATGAAACTGTCGTTAAATGGGAGAAGTACAGTAAAAATTTTGATTTTGCTAAAGATGGATTGGTGAATCGGATGCCACGTAGGATGCCAACCATGGGAGCTAGAAAGGGTCGTATGAGAGGAAAAGGAGGGCCTGAGAATTTGAATTGCAGTTATAGAGGTGTTAGGCAGAGGATTTGGGGCAAGTGGGTTTCTGAAATTCGAGTACCAAATGCTAATACACATGGTTTGACGTCGAGAAAGGTTGGTCGTCTGTGGCTTGGTACTTTTGATACTGCTGTAGAAGCTGCACATGCTTATGATAAAGCTGCAAAGGCCATGTATGGTCCTGTGGCTCGGCTTAATTTCCCCGAATCTTTGGAAACATCAATGTCGGATGAGACCACAGAATCGTGTGATAATGCGTCTGAATTTGAGGATGGTGTGGGTGAAGAGCCAAAGCAGGAAGATGAGGTGTTTGATGCAACTGTAAAAGAGCCAAGTAATGAATGGCACCGGGAAGCTAACAGTATTAAATGCCAATTACAAATGGAGGACGAGCTTGTTAATAATGATGTAGAAGTTGAAGAACTGGCTATCAACAATGTAAGGGAGTCTGTAGATGAATGGCATTCAGAACCTAAGTATGTTAAATGTGAATTGCAAACTGAGGATGAGTTTGTTGAAGATGATGTAGAAGTTGAAGCACTCGCTATGAACAATGTAAGGGAGCCTGAAGATGTATGGCCTCGGGAACCCAAGTATGTGAAATGTGAATTGGAAAAGGAGGACCAGCTTGTTACAAATGATGTTGAAGTTGAAGCAGTCACTGCAAACAATGTAAGGGAGTATGAAGATGTATGGCAGTGGGAACCTAAGTATGTAAAATGCGATTTGGAAGCTCAGGACGAGCTTCTTCAAAGTAAAGCTGAAGTTGAAAGACTTGCAATGAACAATGTAACAGAGGAGGAATTTCAAGCCGTGAGTTATGTTGGCAGCTCCAACCATAGACATGATAATCACTTGGATAATTATCTTCAGGTTGGGAAATTTGATTCAGTACCTAGTGGTACGCCTTATACTAATTTGGACATTTCAGATATTTTTTTGAGGTACAGTAATGATTACTTAGATGCTGAGCTTGTAGATGTGAAATGCAATCCAAAAAATGATTGCAACCCTTCAAATGATGTTACAGTTGACACGTCGGTAATGAGCAAACCCATGGAGAAAGAATTTGCTTTGATTCTGGAATCTGGAGACAACAATCTGCATAATGAACCGATTAACGTGGCAAGCAACAATCTGGTAACTAATCTGGGTGAATATGAAAAGACTGTGCTGCCTCCTAATGAATTTCAGGGCGAGATTGCAGAAACTATGAAACCAAATGGCCATAATGGCTTTGGTGATAATAATGCTTGCTTGCAGGAACATGACGAACGGATAAATGTGGCCTACAGTCCAAGATCTGGCATCAAGCCTTCAACAGATATTGAAACGCAGAAAGAGATCGACAGCAAACTTGGCGACTTGCATAGTTGGTCTCTTGATAAAACATATGGCATTGAGCTACATAATCTTCCTAATCAGTTGCAGATAGCGGATGGCCTATATGGAAGCTTTAATTATAAGGAGGAAGAATGTTTAGGTGTCGATTTTAATCTAGATTGGTCGAGGCAAAATTACTTTTCGGGTGAATTTGAAGAGAGTGCATTGCCTGATTCATGGTTCCCATACTATCACGGAGGCTCTAGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009266 GO:0009408 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010035 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033554 GO:0034605 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

597

Amino Acids

68.18

Weight (kDa)

4.58

Isoelectric Point (pI)

40.89

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	69 - 127	3e-12	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003276)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g10690
malus_domestica	MD04G1165400.v1.1 MD12G1179500.v1.1
prunus_persica	Prupe.6G284400_v2.0.a1 Prupe.6G284400_v2.0.a1
pyrus_communis	pycom04g14750 pycom12g16930
rosa_chinensis	RchiOBHm_Chr3g0461691 RchiOBHm_Chr6g0312551
rosa_laevigata	RLG00000010317 RLG00000024905
rosa_multiflora	Rmu_co8045116.1_g000001 Rmu_co8349119.1_g000001 Rmu_sc0003094.1_g000012 Rmu_sc0008363.1_g000007 Rmu_sc0038320.1_g000002
rosa_roxburghii	Rroxscaffold_1G00048580 Rroxscaffold_2G00101990 Rroxscaffold_4G00310750 Rroxscaffold_6G00418040
rosa_rugosa	Rorug05G0531400 Rorug05G0531400 Rorug06G0396500
rosa_samantha	Rh3AG111200 Rh3BG114200 Rh3CG116400 Rh3DG116100 Rh4DG219100 Rh6AG513900 Rh6AG514000 Rh6BG525800 Rh6BG525900 Rh6CG530900 Rh6CG531000 Rh6DG516200 Rh6DG516300
rosa_wichuraiana	Rw3G009410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1665
AatII	GACGTC	1 cut(s)	290
AccB1I	GGYRCC	1 cut(s)	546
AccB7I	CCANNNNNTGG	1 cut(s)	1505
AciI	CCGC	1 cut(s)	1637
AcoI	YGGCCR	1 cut(s)	1426
AcsI	RAATTY	9 cut(s)	91, 193, 252, 464, 1004, 1082, 1268, 1388, 1733
AcuI	CTGAAG	3 cut(s)	789, 984, 1055
AcyI	GRCGYC	2 cut(s)	5, 287
AfaI	GTAC	6 cut(s)	83, 261, 319, 1095, 1105, 1148
AfiI	CCNNNNNNNGG	2 cut(s)	149, 1505
AflIII	ACRYGT	1 cut(s)	1236
AjiI	CACGTC	1 cut(s)	1239
AjuI	GAANNNNNNNTTGG	2 cut(s)	794, 826
Alw26I	GTCTC	3 cut(s)	428, 1287, 1584
AlwNI	CAGNNNCTG	1 cut(s)	863
Ama87I	CYCGRG	1 cut(s)	783
AoxI	GGCC	7 cut(s)	44, 185, 369, 779, 1426, 1488, 1642
ApeKI	GCWGC	4 cut(s)	341, 362, 1029, 1375
ApoI	RAATTY	9 cut(s)	91, 193, 252, 464, 1004, 1082, 1268, 1388, 1733
AspS9I	GGNCC	4 cut(s)	45, 185, 380, 823
AsuC2I	CCSGG	1 cut(s)	551
AsuHPI	GGTGA	5 cut(s)	130, 494, 1367, 1454, 1742
AvaI	CYCGRG	1 cut(s)	783
AvaII	GGWCC	2 cut(s)	380, 823
BaeI	ACNNNNGTAYC	2 cut(s)	318, 351
BalI	TGGCCA	1 cut(s)	1428
BanI	GGYRCC	1 cut(s)	546
BbvI	GCAGC	4 cut(s)	328, 349, 1041, 1362
BccI	CCATC	3 cut(s)	104, 467, 1634
BceAI	ACGGC	1 cut(s)	998
BcnI	CCSGG	1 cut(s)	551
BcoDI	GTCTC	3 cut(s)	428, 1287, 1584
BfaI	CTAG	4 cut(s)	156, 1098, 1700, 1788
BfmI	CTRYAG	3 cut(s)	333, 651, 1492
BglI	GCCNNNNNGGC	1 cut(s)	1434
BglII	AGATCT	1 cut(s)	1502
BisI	GCNGC	4 cut(s)	342, 363, 1030, 1376
BlpI	GCTNAGC	1 cut(s)	1170
BlsI	GCNGC	4 cut(s)	343, 364, 1031, 1377
Bme1390I	CCNGG	1 cut(s)	551
Bme18I	GGWCC	2 cut(s)	380, 823
BmeT110I	CYCGRG	1 cut(s)	783
BmgBI	CACGTC	1 cut(s)	1239
BmgT120I	GGNCC	4 cut(s)	45, 185, 380, 823
BmiI	GGNNCC	5 cut(s)	548, 765, 789, 906, 1766
BmrFI	CCNGG	1 cut(s)	551
BmsI	GCATC	5 cut(s)	117, 129, 505, 1156, 1518
BpmI	CTGGAG	1 cut(s)	1311
Bpu10I	CCTNAGC	1 cut(s)	936
Bpu1102I	GCTNAGC	1 cut(s)	1170
BpuMI	CCSGG	1 cut(s)	551
BsaAI	YACGTR	1 cut(s)	134
BsaBI	GATNNNNATC	2 cut(s)	1065, 1695
BsaHI	GRCGYC	2 cut(s)	5, 287
BsaI	GGTCTC	2 cut(s)	428, 1584
BsaJI	CCNNGG	3 cut(s)	147, 782, 1257
Bsc4I	CCNNNNNNNGG	2 cut(s)	149, 1505
Bse1I	ACTGG	1 cut(s)	630
Bse3DI	GCAATG	2 cut(s)	987, 1748
Bse8I	GATNNNNATC	2 cut(s)	1065, 1695
BseDI	CCNNGG	3 cut(s)	147, 782, 1257
BseGI	GGATG	7 cut(s)	61, 132, 144, 436, 478, 712, 1645
BseJI	GATNNNNATC	2 cut(s)	1065, 1695
BseLI	CCNNNNNNNGG	2 cut(s)	149, 1505
BseMI	GCAATG	2 cut(s)	987, 1748
BseMII	CTCAG	4 cut(s)	180, 693, 950, 1161
BseNI	ACTGG	1 cut(s)	630
BseRI	GAGGAG	1 cut(s)	1013
BseXI	GCAGC	4 cut(s)	328, 349, 1041, 1362
BsgI	GTGCAG	1 cut(s)	327
BshFI	GGCC	7 cut(s)	46, 187, 371, 781, 1428, 1490, 1644
BshNI	GGYRCC	1 cut(s)	546
BsiHKCI	CYCGRG	1 cut(s)	783
BsiSI	CCGG	1 cut(s)	550
BslI	CCNNNNNNNGG	2 cut(s)	149, 1505
BsmAI	GTCTC	3 cut(s)	428, 1287, 1584
BsmI	GAATGC	1 cut(s)	664
BsnI	GGCC	7 cut(s)	46, 187, 371, 781, 1428, 1490, 1644
Bso31I	GGTCTC	2 cut(s)	428, 1584
BsoBI	CYCGRG	1 cut(s)	783
Bsp143I	GATC	2 cut(s)	1502, 1545
Bsp1720I	GCTNAGC	1 cut(s)	1170
Bsp19I	CCATGG	2 cut(s)	147, 1257
BspACI	CCGC	1 cut(s)	1637
BspANI	GGCC	7 cut(s)	46, 187, 371, 781, 1428, 1490, 1644
BspCNI	CTCAG	4 cut(s)	181, 694, 949, 1162
BspLI	GGNNCC	5 cut(s)	548, 765, 789, 906, 1766
BspQI	GCTCTTC	1 cut(s)	480
BspT107I	GGYRCC	1 cut(s)	546
BspTNI	GGTCTC	2 cut(s)	428, 1584
BsrDI	GCAATG	2 cut(s)	987, 1748
BsrI	ACTGG	1 cut(s)	630
BssECI	CCNNGG	3 cut(s)	147, 782, 1257
BssMI	GATC	2 cut(s)	1502, 1545
BssNI	GRCGYC	2 cut(s)	5, 287
BssT1I	CCWWGG	2 cut(s)	147, 1257
Bst4CI	ACNGT	8 cut(s)	64, 86, 523, 563, 1151, 1231, 1372, 1496
Bst6I	CTCTTC	2 cut(s)	480, 1734
BstACI	GRCGYC	2 cut(s)	5, 287
BstAPI	GCANNNNNTGC	1 cut(s)	863
BstBAI	YACGTR	1 cut(s)	134
BstC8I	GCNNGC	3 cut(s)	1330, 1456, 1460
BstDEI	CTNAG	7 cut(s)	189, 675, 702, 909, 936, 1162, 1170
BstDSI	CCRYGG	2 cut(s)	147, 1257
BstF5I	GGATG	7 cut(s)	61, 132, 144, 436, 478, 712, 1645
BstKTI	GATC	2 cut(s)	1505, 1548
BstMAI	GTCTC	3 cut(s)	428, 1287, 1584
BstMBI	GATC	2 cut(s)	1502, 1545
BstMWI	GCNNNNNNNGC	6 cut(s)	338, 347, 368, 863, 1434, 1560
BstNSI	RCATGY	1 cut(s)	350
BstSCI	CCNGG	1 cut(s)	549
BstSFI	CTRYAG	3 cut(s)	333, 651, 1492
BstV1I	GCAGC	4 cut(s)	328, 349, 1041, 1362
BstX2I	RGATCY	1 cut(s)	1502
BstYI	RGATCY	1 cut(s)	1502
BsuRI	GGCC	7 cut(s)	46, 187, 371, 781, 1428, 1490, 1644
BtgI	CCRYGG	2 cut(s)	147, 1257
BtrI	CACGTC	1 cut(s)	1239
BtsCI	GGATG	7 cut(s)	61, 132, 144, 436, 478, 712, 1645
BtsI	GCAGTG	2 cut(s)	861, 905
BtsIMutI	CAGTG	2 cut(s)	861, 905
Cac8I	GCNNGC	3 cut(s)	1330, 1456, 1460
CaiI	CAGNNNCTG	1 cut(s)	863
Cfr13I	GGNCC	4 cut(s)	45, 185, 380, 823
CseI	GACGC	2 cut(s)	13, 447
Csp6I	GTAC	6 cut(s)	82, 260, 318, 1094, 1104, 1147
CviAII	CATG	8 cut(s)	148, 278, 347, 373, 1046, 1258, 1469, 1761
CviQI	GTAC	6 cut(s)	82, 260, 318, 1094, 1104, 1147
DdeI	CTNAG	7 cut(s)	189, 675, 702, 909, 936, 1162, 1170
DpnI	GATC	2 cut(s)	1504, 1547
DpnII	GATC	2 cut(s)	1502, 1545
EaeI	YGGCCR	1 cut(s)	1426
Eam1104I	CTCTTC	2 cut(s)	480, 1734
EarI	CTCTTC	2 cut(s)	480, 1734
Eco130I	CCWWGG	2 cut(s)	147, 1257
Eco31I	GGTCTC	2 cut(s)	428, 1584
Eco47I	GGWCC	2 cut(s)	380, 823
Eco57I	CTGAAG	3 cut(s)	789, 984, 1055
Eco88I	CYCGRG	1 cut(s)	783
EcoO109I	RGGNCCY	1 cut(s)	185
EcoT14I	CCWWGG	2 cut(s)	147, 1257
ErhI	CCWWGG	2 cut(s)	147, 1257
FaeI	CATG	8 cut(s)	151, 281, 350, 376, 1049, 1261, 1472, 1764
FatI	CATG	8 cut(s)	147, 277, 346, 372, 1045, 1257, 1468, 1760
FauNDI	CATATG	1 cut(s)	1594
Fnu4HI	GCNGC	4 cut(s)	342, 363, 1030, 1376
FokI	GGATG	7 cut(s)	68, 139, 151, 443, 485, 719, 1652
Fsp4HI	GCNGC	4 cut(s)	342, 363, 1030, 1376
FspBI	CTAG	4 cut(s)	156, 1098, 1700, 1788
GluI	GCNGC	4 cut(s)	342, 363, 1030, 1376
GsuI	CTGGAG	1 cut(s)	1311
HaeIII	GGCC	7 cut(s)	46, 187, 371, 781, 1428, 1490, 1644
HapII	CCGG	1 cut(s)	550
HgaI	GACGC	2 cut(s)	13, 447
Hin1I	GRCGYC	2 cut(s)	5, 287
Hin1II	CATG	8 cut(s)	151, 281, 350, 376, 1049, 1261, 1472, 1764
HincII	GTYRAC	1 cut(s)	1234
HindII	GTYRAC	1 cut(s)	1234
HindIII	AAGCTT	1 cut(s)	1654
HinfI	GANTC	8 cut(s)	121, 407, 443, 647, 1088, 1279, 1286, 1757
HpaII	CCGG	1 cut(s)	550
HphI	GGTGA	5 cut(s)	130, 494, 1367, 1454, 1742
Hpy166II	GTNNAC	1 cut(s)	1234
Hpy188I	TCNGA	7 cut(s)	19, 126, 250, 430, 463, 670, 1132
Hpy188III	TCNNGA	7 cut(s)	291, 785, 938, 1283, 1290, 1583, 1700
Hpy8I	GTNNAC	1 cut(s)	1234
Hpy99I	CGWCG	2 cut(s)	292, 1243
HpyAV	CCTTC	2 cut(s)	1224, 1527
HpyCH4III	ACNGT	8 cut(s)	64, 86, 523, 563, 1151, 1231, 1372, 1496
HpyCH4IV	ACGT	4 cut(s)	133, 287, 1238, 1323
HpyF10VI	GCNNNNNNNGC	6 cut(s)	338, 347, 368, 863, 1434, 1560
HpyF3I	CTNAG	7 cut(s)	189, 675, 702, 909, 936, 1162, 1170
HpySE526I	ACGT	4 cut(s)	133, 287, 1238, 1323
Hsp92I	GRCGYC	2 cut(s)	5, 287
Hsp92II	CATG	8 cut(s)	151, 281, 350, 376, 1049, 1261, 1472, 1764
Kzo9I	GATC	2 cut(s)	1502, 1545
LguI	GCTCTTC	1 cut(s)	480
LmnI	GCTCC	3 cut(s)	152, 763, 1037
Lsp1109I	GCAGC	4 cut(s)	328, 349, 1041, 1362
LweI	GCATC	5 cut(s)	117, 129, 505, 1156, 1518
MaeI	CTAG	4 cut(s)	156, 1098, 1700, 1788
MaeII	ACGT	4 cut(s)	133, 287, 1238, 1323
MaeIII	GTNAC	5 cut(s)	832, 859, 991, 1225, 1342
MalI	GATC	2 cut(s)	1504, 1547
MboI	GATC	2 cut(s)	1502, 1545
MflI	RGATCY	1 cut(s)	1502
MlsI	TGGCCA	1 cut(s)	1428
MluNI	TGGCCA	1 cut(s)	1428
MlyI	GAGTC	1 cut(s)	656
MmeI	TCCRAC	2 cut(s)	408, 1059
Mox20I	TGGCCA	1 cut(s)	1428
MscI	TGGCCA	1 cut(s)	1428
MseI	TTAA	8 cut(s)	69, 396, 567, 600, 684, 1320, 1659, 1695
MslI	CAYNNNNRTG	2 cut(s)	351, 1044
Msp20I	TGGCCA	1 cut(s)	1428
MspI	CCGG	1 cut(s)	550
MspR9I	CCNGG	1 cut(s)	551
Mva1269I	GAATGC	1 cut(s)	664
MwoI	GCNNNNNNNGC	6 cut(s)	338, 347, 368, 863, 1434, 1560
NciI	CCSGG	1 cut(s)	551
NcoI	CCATGG	2 cut(s)	147, 1257
NdeI	CATATG	1 cut(s)	1594
NdeII	GATC	2 cut(s)	1502, 1545
NlaIII	CATG	8 cut(s)	151, 281, 350, 376, 1049, 1261, 1472, 1764
NlaIV	GGNNCC	5 cut(s)	548, 765, 789, 906, 1766
NmeAIII	GCCGAG	1 cut(s)	370
NmuCI	GTSAC	1 cut(s)	859
NspI	RCATGY	1 cut(s)	350
PciSI	GCTCTTC	1 cut(s)	480
PcsI	WCGNNNNNNNCGW	1 cut(s)	130
PctI	GAATGC	1 cut(s)	664
PfeI	GAWTC	7 cut(s)	121, 407, 443, 1088, 1279, 1286, 1757
PflMI	CCANNNNNTGG	1 cut(s)	1505
PkrI	GCNGC	4 cut(s)	343, 364, 1031, 1377
PleI	GAGTC	1 cut(s)	655
PpsI	GAGTC	1 cut(s)	655
Ppu21I	YACGTR	1 cut(s)	134
PsiI	TTATAA	1 cut(s)	1665
PspN4I	GGNNCC	5 cut(s)	548, 765, 789, 906, 1766
PspPI	GGNCC	4 cut(s)	45, 185, 380, 823
PstNI	CAGNNNCTG	1 cut(s)	863
PsuI	RGATCY	1 cut(s)	1502
RsaI	GTAC	6 cut(s)	83, 261, 319, 1095, 1105, 1148
RsaNI	GTAC	6 cut(s)	82, 260, 318, 1094, 1104, 1147
RseI	CAYNNNNRTG	2 cut(s)	351, 1044
SapI	GCTCTTC	1 cut(s)	480
SaqAI	TTAA	8 cut(s)	69, 396, 567, 600, 684, 1320, 1659, 1695
SatI	GCNGC	4 cut(s)	342, 363, 1030, 1376
Sau3AI	GATC	2 cut(s)	1502, 1545
Sau96I	GGNCC	4 cut(s)	45, 185, 380, 823
SchI	GAGTC	1 cut(s)	656
ScrFI	CCNGG	1 cut(s)	551
SfaNI	GCATC	5 cut(s)	117, 129, 505, 1156, 1518
SfcI	CTRYAG	3 cut(s)	333, 651, 1492
SinI	GGWCC	2 cut(s)	380, 823
SmiMI	CAYNNNNRTG	2 cut(s)	351, 1044
SsiI	CCGC	1 cut(s)	1637
SspMI	CTAG	4 cut(s)	156, 1098, 1700, 1788
StyD4I	CCNGG	1 cut(s)	549
StyI	CCWWGG	2 cut(s)	147, 1257
TaaI	ACNGT	8 cut(s)	64, 86, 523, 563, 1151, 1231, 1372, 1496
TaiI	ACGT	4 cut(s)	136, 290, 1241, 1326
TaqI	TCGA	5 cut(s)	256, 290, 1548, 1689, 1709
TatI	WGTACW	1 cut(s)	81
TfiI	GAWTC	7 cut(s)	121, 407, 443, 1088, 1279, 1286, 1757
Tru1I	TTAA	8 cut(s)	69, 396, 567, 600, 684, 1320, 1659, 1695
Tru9I	TTAA	8 cut(s)	69, 396, 567, 600, 684, 1320, 1659, 1695
TscAI	CASTG	2 cut(s)	868, 905
TseFI	GTSAC	1 cut(s)	859
TseI	GCWGC	4 cut(s)	341, 362, 1029, 1375
Tsp45I	GTSAC	1 cut(s)	859
TspGWI	ACGGA	2 cut(s)	1492, 1794
TspRI	CASTG	2 cut(s)	868, 905
Van91I	CCANNNNNTGG	1 cut(s)	1505
VpaK11BI	GGWCC	2 cut(s)	380, 823
XapI	RAATTY	9 cut(s)	91, 193, 252, 464, 1004, 1082, 1268, 1388, 1733
XbaI	TCTAGA	1 cut(s)	1699
XceI	RCATGY	1 cut(s)	350
XcmI	CCANNNNNNNNNTGG	2 cut(s)	540, 1436
XspI	CTAG	4 cut(s)	156, 1098, 1700, 1788
ZraI	GACGTC	1 cut(s)	288

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.