Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr12

Orthogroup ID

OG0003276

Physical Location & Seq

Genomic Coordinates Reverse (-)

19221300 .. 19223221

Gene Structure 1922 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12g16930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1497 bp

ATGGCGTCCGAGGCTTCCGACGGGGATAGGAAATTGCGGAAGAGGCGCTATGGGTGCGATTCGATAGAGGACACTCTGGCTAGGTGGAAGAACTACAATGAGAGGCTTGATTTTGAAAAAGATGGAGGGACGAAGACTCGGAGGGTTCCGGCGAAGGGCTCCACAAAAGGGTGTATGAGAGGGAAAGGAGGGCCCGAGAACTCCAGTTGTGTCTACAGGGGTGTTAGGCAGAGGACTTGGGGAAAATGGGTGGCAGAAATCCGAGAACCGATTCACGCCACAGGCGGCGCTGTACCGAAGAAGAAGAATAACCGTCTTTGGCTTGGGACTTTCCCTACAGCCTGGGAAGCTGCACTTGCTTATGATAAAGCTGCTAGGTCAATGTATGGCGCTTTGGCCCGGCTCAACTTCGCAAAAAACACTATGGATTTGAAGGACTACTGCTCTAGTTTTGTGTCACCTACAATGACTAAAACATCATCACACGAGTCATCGTCAACGTATAATAGTGCGGATCAGACAGAGGAAAGATCGGGTTTCTTTGAGAACTGTCTGCCCAGAGAGCCGAAGCAGGAAATGGTTTGTGCTGAGGGATTGGTGACTGAGGAATTAGAGCTTTCCAATGCTACCTTAAGAGAACCAAAAGCTGTGAAACGCGAATACAAAACCGAACGCGAGCTTGTTAAGAACGGTGTTGTTTTTCAGACGGGGAGCTATGGAAGCTTCGATCATAGGGGCGATTACTTGCGAAATGAGGTCCCAGCTGTAAATTTTGATAGTGTATTTGATGGGAAGACTCGTAACGATGTGGATTCTTTGGAGATACTTTTGAGGTCCAATTATGCTCACTTAACTGAGCTTGGAGAAGGGGAATACAATCAAAGAAACGGTTGCAACCCTTCAAATGGTGTCAAATTTGAGACACCGGCAATGAGGGAAGCAGTGGTGAAAGAGTTCCCGGTGATTCTGGAATCTGGAAGCCACAATGGCTTAGATGATAAGTACAACAATATGCACAACGAGCAGAAAAATGTTCCATCTGATGATGCTGGAATGAAGGGATCGATAACTGGTCAACAATTGCTGGGAGGTTTAGCAGAAACTACGAAATTAAATGGCCATAATCGCGATGGCTTCATACATACTTATGCTTGCTTAGATGATTTAAATGTGTCATACAATCCAGGATATGGCATCAATGCATCGAATGACATCGGAATGCAGAGGGAGCTCGACGATAGACTCGAGTACATGCATAACCGGTCTGCAGAAAAAACCTATGGCATTGATGCTGCTCAAGAACAGCAATGGGAGAGGATGCATTGTCGCCCTATACAATTTCAGACACAACCACAAGTCGACATACCTGGAAGCTCGAATCATACGCAGGACGGATATTTAGACGTGGATTTCGGTTCAGATTTAGTCAGACAAAGTTATCATTCCGGTGTAATGGAAGAGCAGGGGCTGCATTATTCATGGTTCCCTTACTCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009266 GO:0009408 GO:0009414 GO:0009415 GO:0009628 GO:0009651 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010035 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0033554 GO:0034605 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0140110 GO:1901363 GO:1901700 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2

Protein Analysis

499

Amino Acids

56.12

Weight (kDa)

5.89

Isoelectric Point (pI)

47.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	70 - 130	3.1e-12	AP2 domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003276)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g10690
malus_domestica	MD04G1165400.v1.1 MD12G1179500.v1.1
prunus_persica	Prupe.6G284400_v2.0.a1 Prupe.6G284400_v2.0.a1
pyrus_communis	pycom04g14750 pycom12g16930
rosa_chinensis	RchiOBHm_Chr3g0461691 RchiOBHm_Chr6g0312551
rosa_laevigata	RLG00000010317 RLG00000024905
rosa_multiflora	Rmu_co8045116.1_g000001 Rmu_co8349119.1_g000001 Rmu_sc0003094.1_g000012 Rmu_sc0008363.1_g000007 Rmu_sc0038320.1_g000002
rosa_roxburghii	Rroxscaffold_1G00048580 Rroxscaffold_2G00101990 Rroxscaffold_4G00310750 Rroxscaffold_6G00418040
rosa_rugosa	Rorug05G0531400 Rorug05G0531400 Rorug06G0396500
rosa_samantha	Rh3AG111200 Rh3BG114200 Rh3CG116400 Rh3DG116100 Rh4DG219100 Rh6AG513900 Rh6AG514000 Rh6BG525800 Rh6BG525900 Rh6CG530900 Rh6CG531000 Rh6DG516200 Rh6DG516300
rosa_wichuraiana	Rw3G009410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	1190
AccI	GTMKAC	2 cut(s)	213, 1359
AccII	CGCG	3 cut(s)	657, 675, 1128
AciI	CCGC	3 cut(s)	37, 285, 512
AclWI	GGATC	2 cut(s)	522, 1069
AcoI	YGGCCR	1 cut(s)	1117
AcsI	RAATTY	2 cut(s)	769, 914
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	3 cut(s)	294, 1004, 1250
AfiI	CCNNNNNNNGG	4 cut(s)	155, 168, 905, 1190
AflII	CTTAAG	1 cut(s)	631
AgeI	ACCGGT	1 cut(s)	1260
AgsI	TTSAA	3 cut(s)	116, 433, 903
AjiI	CACGTC	1 cut(s)	1405
AjnI	CCWGG	3 cut(s)	341, 1183, 1366
Alw21I	GWGCWC	1 cut(s)	1233
Alw26I	GTCTC	1 cut(s)	914
AlwI	GGATC	2 cut(s)	522, 1069
AlwNI	CAGNNNCTG	1 cut(s)	1468
Ama87I	CYCGRG	2 cut(s)	194, 1244
AoxI	GGCC	3 cut(s)	191, 396, 1117
ApaI	GGGCCC	1 cut(s)	195
ApeKI	GCWGC	4 cut(s)	350, 371, 1292, 1468
ApoI	RAATTY	2 cut(s)	769, 914
ArsI	GACNNNNNNTTYG	2 cut(s)	1394, 1426
AsiGI	ACCGGT	1 cut(s)	1260
Asp700I	GAANNNNTTC	2 cut(s)	270, 953
AspLEI	GCGC	3 cut(s)	48, 290, 392
AspS9I	GGNCC	5 cut(s)	191, 192, 397, 757, 834
AsuC2I	CCSGG	2 cut(s)	400, 959
AsuHPI	GGTGA	4 cut(s)	450, 610, 958, 973
AvaI	CYCGRG	2 cut(s)	194, 1244
AvaII	GGWCC	2 cut(s)	757, 834
BaeGI	GKGCMC	1 cut(s)	195
BalI	TGGCCA	1 cut(s)	1119
BanII	GRGCYC	3 cut(s)	161, 195, 1233
BauI	CACGAG	1 cut(s)	485
BbsI	GAAGAC	2 cut(s)	140, 800
Bbv12I	GWGCWC	1 cut(s)	1233
BbvCI	CCTCAGC	1 cut(s)	588
BbvI	GCAGC	4 cut(s)	337, 358, 1279, 1455
BccI	CCATC	4 cut(s)	116, 782, 1045, 1124
BciT130I	CCWGG	3 cut(s)	343, 1185, 1368
BcnI	CCSGG	2 cut(s)	400, 959
BcoDI	GTCTC	1 cut(s)	914
BfaI	CTAG	3 cut(s)	81, 375, 447
BfmI	CTRYAG	3 cut(s)	214, 336, 1266
BfoI	RGCGCY	3 cut(s)	49, 291, 393
BfrI	CTTAAG	1 cut(s)	631
BglI	GCCNNNNNGGC	1 cut(s)	987
BisI	GCNGC	5 cut(s)	286, 351, 372, 1293, 1469
BlsI	GCNGC	5 cut(s)	287, 352, 373, 1294, 1470
Bme1390I	CCNGG	5 cut(s)	343, 400, 959, 1185, 1368
Bme18I	GGWCC	2 cut(s)	757, 834
BmeT110I	CYCGRG	2 cut(s)	194, 1244
BmgBI	CACGTC	1 cut(s)	1405
BmgT120I	GGNCC	5 cut(s)	191, 192, 397, 757, 834
BmiI	GGNNCC	5 cut(s)	147, 160, 193, 759, 1484
BmrFI	CCNGG	5 cut(s)	343, 400, 959, 1185, 1368
BmsI	GCATC	5 cut(s)	1036, 1203, 1211, 1279, 1308
BpiI	GAAGAC	2 cut(s)	140, 800
BpmI	CTGGAG	1 cut(s)	187
Bpu10I	CCTNAGC	1 cut(s)	588
BpuEI	CTTGAG	1 cut(s)	1281
BpuMI	CCSGG	2 cut(s)	400, 959
Bsa29I	ATCGAT	1 cut(s)	1064
BsaHI	GRCGYC	1 cut(s)	5
BsaJI	CCNNGG	2 cut(s)	9, 342
BsaWI	WCCGGW	2 cut(s)	1260, 1445
Bsc4I	CCNNNNNNNGG	4 cut(s)	155, 168, 905, 1190
Bse118I	RCCGGY	2 cut(s)	925, 1260
Bse1I	ACTGG	2 cut(s)	204, 1075
Bse3DI	GCAATG	2 cut(s)	936, 1313
BseBI	CCWGG	3 cut(s)	343, 1185, 1368
BseCI	ATCGAT	1 cut(s)	1064
BseDI	CCNNGG	2 cut(s)	9, 342
BseGI	GGATG	1 cut(s)	1323
BseLI	CCNNNNNNNGG	4 cut(s)	155, 168, 905, 1190
BseMI	GCAATG	2 cut(s)	936, 1313
BseMII	CTCAG	3 cut(s)	579, 594, 846
BseNI	ACTGG	2 cut(s)	204, 1075
BseSI	GKGCMC	1 cut(s)	195
BseXI	GCAGC	4 cut(s)	337, 358, 1279, 1455
BseYI	CCCAGC	2 cut(s)	760, 1084
BsgI	GTGCAG	1 cut(s)	336
Bsh1236I	CGCG	3 cut(s)	657, 675, 1128
BshFI	GGCC	3 cut(s)	193, 398, 1119
BshTI	ACCGGT	1 cut(s)	1260
BshVI	ATCGAT	1 cut(s)	1064
BsiHKAI	GWGCWC	1 cut(s)	1233
BsiHKCI	CYCGRG	2 cut(s)	194, 1244
BsiSI	CCGG	6 cut(s)	149, 400, 926, 959, 1261, 1446
BslFI	GGGAC	3 cut(s)	142, 340, 743
BslI	CCNNNNNNNGG	4 cut(s)	155, 168, 905, 1190
BsmAI	GTCTC	1 cut(s)	914
BsmFI	GGGAC	3 cut(s)	142, 340, 743
BsmI	GAATGC	1 cut(s)	1224
BsnI	GGCC	3 cut(s)	193, 398, 1119
BsoBI	CYCGRG	2 cut(s)	194, 1244
Bsp120I	GGGCCC	1 cut(s)	191
Bsp1286I	GDGCHC	3 cut(s)	161, 195, 1233
Bsp143I	GATC	4 cut(s)	514, 530, 727, 1061
Bsp68I	TCGCGA	1 cut(s)	1128
BspACI	CCGC	3 cut(s)	37, 285, 512
BspANI	GGCC	3 cut(s)	193, 398, 1119
BspCNI	CTCAG	3 cut(s)	580, 595, 847
BspDI	ATCGAT	1 cut(s)	1064
BspFNI	CGCG	3 cut(s)	657, 675, 1128
BspLI	GGNNCC	5 cut(s)	147, 160, 193, 759, 1484
BspMAI	CTGCAG	1 cut(s)	1270
BspPI	GGATC	2 cut(s)	522, 1069
BspQI	GCTCTTC	1 cut(s)	1452
BspTI	CTTAAG	1 cut(s)	631
BsrDI	GCAATG	2 cut(s)	936, 1313
BsrFI	RCCGGY	2 cut(s)	925, 1260
BsrI	ACTGG	2 cut(s)	204, 1075
BssAI	RCCGGY	2 cut(s)	925, 1260
BssECI	CCNNGG	2 cut(s)	9, 342
BssMI	GATC	4 cut(s)	514, 530, 727, 1061
BssNI	GRCGYC	1 cut(s)	5
BssSI	CACGAG	1 cut(s)	485
Bst2BI	CACGAG	1 cut(s)	485
Bst2UI	CCWGG	3 cut(s)	343, 1185, 1368
Bst4CI	ACNGT	4 cut(s)	314, 551, 692, 890
Bst6I	CTCTTC	2 cut(s)	35, 1452
BstACI	GRCGYC	1 cut(s)	5
BstAFI	CTTAAG	1 cut(s)	631
BstAPI	GCANNNNNTGC	1 cut(s)	1468
BstC8I	GCNNGC	2 cut(s)	677, 1153
BstDEI	CTNAG	6 cut(s)	588, 603, 855, 991, 1156, 1494
BstF5I	GGATG	1 cut(s)	1323
BstFNI	CGCG	3 cut(s)	657, 675, 1128
BstH2I	RGCGCY	3 cut(s)	49, 291, 393
BstHHI	GCGC	3 cut(s)	48, 290, 392
BstKTI	GATC	4 cut(s)	517, 533, 730, 1064
BstMAI	GTCTC	1 cut(s)	914
BstMBI	GATC	4 cut(s)	514, 530, 727, 1061
BstNI	CCWGG	3 cut(s)	343, 1185, 1368
BstNSI	RCATGY	1 cut(s)	1255
BstSCI	CCNGG	5 cut(s)	341, 398, 957, 1183, 1366
BstSFI	CTRYAG	3 cut(s)	214, 336, 1266
BstSLI	GKGCMC	1 cut(s)	195
BstUI	CGCG	3 cut(s)	657, 675, 1128
BstV1I	GCAGC	4 cut(s)	337, 358, 1279, 1455
BstV2I	GAAGAC	2 cut(s)	140, 800
Bsu15I	ATCGAT	1 cut(s)	1064
BsuRI	GGCC	3 cut(s)	193, 398, 1119
BsuTUI	ATCGAT	1 cut(s)	1064
BtgZI	GCGATG	1 cut(s)	1143
BtrI	CACGTC	1 cut(s)	1405
BtsCI	GGATG	1 cut(s)	1323
BtsI	GCAGTG	1 cut(s)	948
BtsIMutI	CAGTG	1 cut(s)	948
BtuMI	TCGCGA	1 cut(s)	1128
Cac8I	GCNNGC	2 cut(s)	677, 1153
CaiI	CAGNNNCTG	1 cut(s)	1468
CfoI	GCGC	3 cut(s)	48, 290, 392
Cfr10I	RCCGGY	2 cut(s)	925, 1260
Cfr13I	GGNCC	5 cut(s)	191, 192, 397, 757, 834
ClaI	ATCGAT	1 cut(s)	1064
Csp6I	GTAC	3 cut(s)	293, 1003, 1249
CspAI	ACCGGT	1 cut(s)	1260
CviAII	CATG	2 cut(s)	1252, 1479
CviQI	GTAC	3 cut(s)	293, 1003, 1249
DdeI	CTNAG	6 cut(s)	588, 603, 855, 991, 1156, 1494
DpnI	GATC	4 cut(s)	516, 532, 729, 1063
DpnII	GATC	4 cut(s)	514, 530, 727, 1061
DraI	TTTAAA	1 cut(s)	1167
EaeI	YGGCCR	1 cut(s)	1117
Eam1104I	CTCTTC	2 cut(s)	35, 1452
EarI	CTCTTC	2 cut(s)	35, 1452
Ecl136II	GAGCTC	1 cut(s)	1231
Eco24I	GRGCYC	3 cut(s)	161, 195, 1233
Eco47I	GGWCC	2 cut(s)	757, 834
Eco53kI	GAGCTC	1 cut(s)	1231
Eco88I	CYCGRG	2 cut(s)	194, 1244
EcoICRI	GAGCTC	1 cut(s)	1231
EcoO109I	RGGNCCY	2 cut(s)	191, 757
EcoRII	CCWGG	3 cut(s)	341, 1183, 1366
EcoT22I	ATGCAT	3 cut(s)	1204, 1257, 1323
EcoT38I	GRGCYC	3 cut(s)	161, 195, 1233
FaeI	CATG	2 cut(s)	1255, 1482
FalI	AAGNNNNNCTT	2 cut(s)	339, 371
FaqI	GGGAC	3 cut(s)	142, 340, 743
FatI	CATG	2 cut(s)	1251, 1478
FblI	GTMKAC	2 cut(s)	213, 1359
Fnu4HI	GCNGC	5 cut(s)	286, 351, 372, 1293, 1469
FokI	GGATG	1 cut(s)	1330
FriOI	GRGCYC	3 cut(s)	161, 195, 1233
Fsp4HI	GCNGC	5 cut(s)	286, 351, 372, 1293, 1469
FspBI	CTAG	3 cut(s)	81, 375, 447
GlaI	GCGC	3 cut(s)	47, 289, 391
GluI	GCNGC	5 cut(s)	286, 351, 372, 1293, 1469
GsaI	CCCAGC	2 cut(s)	764, 1088
GsuI	CTGGAG	1 cut(s)	187
HaeII	RGCGCY	3 cut(s)	49, 291, 393
HaeIII	GGCC	3 cut(s)	193, 398, 1119
HapII	CCGG	6 cut(s)	149, 400, 926, 959, 1261, 1446
HhaI	GCGC	3 cut(s)	48, 290, 392
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	2 cut(s)	1255, 1482
Hin6I	GCGC	3 cut(s)	46, 288, 390
HinP1I	GCGC	3 cut(s)	46, 288, 390
HincII	GTYRAC	3 cut(s)	498, 1076, 1360
HindII	GTYRAC	3 cut(s)	498, 1076, 1360
HindIII	AAGCTT	1 cut(s)	721
HpaII	CCGG	6 cut(s)	149, 400, 926, 959, 1261, 1446
HphI	GGTGA	4 cut(s)	450, 610, 958, 973
Hpy166II	GTNNAC	4 cut(s)	214, 498, 1076, 1360
Hpy188III	TCNNGA	4 cut(s)	968, 975, 1127, 1298
Hpy8I	GTNNAC	4 cut(s)	214, 498, 1076, 1360
Hpy99I	CGWCG	2 cut(s)	23, 1238
HpyAV	CCTTC	5 cut(s)	148, 427, 860, 909, 1051
HpyCH4III	ACNGT	4 cut(s)	314, 551, 692, 890
HpyCH4IV	ACGT	2 cut(s)	500, 1404
HpyCH4V	TGCA	9 cut(s)	353, 894, 1015, 1202, 1222, 1255, 1268, 1321, 1471
HpyF3I	CTNAG	6 cut(s)	588, 603, 855, 991, 1156, 1494
HpySE526I	ACGT	2 cut(s)	500, 1404
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	2 cut(s)	1255, 1482
HspAI	GCGC	3 cut(s)	46, 288, 390
Kzo9I	GATC	4 cut(s)	514, 530, 727, 1061
LguI	GCTCTTC	1 cut(s)	1452
LmnI	GCTCC	3 cut(s)	164, 711, 1228
Lsp1109I	GCAGC	4 cut(s)	337, 358, 1279, 1455
LweI	GCATC	5 cut(s)	1036, 1203, 1211, 1279, 1308
MaeI	CTAG	3 cut(s)	81, 375, 447
MaeII	ACGT	2 cut(s)	500, 1404
MaeIII	GTNAC	3 cut(s)	456, 598, 800
MalI	GATC	4 cut(s)	516, 532, 729, 1063
MboI	GATC	4 cut(s)	514, 530, 727, 1061
MboII	GAAGA	8 cut(s)	52, 100, 145, 310, 313, 316, 805, 1469
MfeI	CAATTG	1 cut(s)	1079
MhlI	GDGCHC	3 cut(s)	161, 195, 1233
MlsI	TGGCCA	1 cut(s)	1119
MluCI	AATT	8 cut(s)	32, 608, 769, 838, 914, 1079, 1109, 1337
MluNI	TGGCCA	1 cut(s)	1119
MlyI	GAGTC	4 cut(s)	130, 497, 790, 1236
MmeI	TCCRAC	1 cut(s)	42
Mox20I	TGGCCA	1 cut(s)	1119
Mph1103I	ATGCAT	3 cut(s)	1204, 1257, 1323
MroXI	GAANNNNTTC	2 cut(s)	270, 953
MscI	TGGCCA	1 cut(s)	1119
MseI	TTAA	5 cut(s)	632, 684, 851, 1112, 1166
MslI	CAYNNNNRTG	3 cut(s)	1146, 1217, 1446
Msp20I	TGGCCA	1 cut(s)	1119
MspA1I	CMGCKG	1 cut(s)	764
MspCI	CTTAAG	1 cut(s)	631
MspI	CCGG	6 cut(s)	149, 400, 926, 959, 1261, 1446
MspR9I	CCNGG	5 cut(s)	343, 400, 959, 1185, 1368
MunI	CAATTG	1 cut(s)	1079
Mva1269I	GAATGC	1 cut(s)	1224
MvaI	CCWGG	3 cut(s)	343, 1185, 1368
MvnI	CGCG	3 cut(s)	657, 675, 1128
NciI	CCSGG	2 cut(s)	400, 959
NdeII	GATC	4 cut(s)	514, 530, 727, 1061
NlaIII	CATG	2 cut(s)	1255, 1482
NlaIV	GGNNCC	5 cut(s)	147, 160, 193, 759, 1484
NmuCI	GTSAC	2 cut(s)	456, 598
NruI	TCGCGA	1 cut(s)	1128
NsiI	ATGCAT	3 cut(s)	1204, 1257, 1323
NspI	RCATGY	1 cut(s)	1255
PaeR7I	CTCGAG	1 cut(s)	1244
PciSI	GCTCTTC	1 cut(s)	1452
PcsI	WCGNNNNNNNCGW	1 cut(s)	1242
PctI	GAATGC	1 cut(s)	1224
PdmI	GAANNNNTTC	2 cut(s)	270, 953
PfeI	GAWTC	6 cut(s)	59, 271, 812, 964, 971, 1378
PflMI	CCANNNNNTGG	1 cut(s)	1190
PfoI	TCCNGGA	1 cut(s)	1183
PinAI	ACCGGT	1 cut(s)	1260
PkrI	GCNGC	5 cut(s)	287, 352, 373, 1294, 1470
PleI	GAGTC	4 cut(s)	130, 496, 790, 1236
PpsI	GAGTC	4 cut(s)	130, 496, 790, 1236
PpuMI	RGGWCCY	1 cut(s)	757
Psp124BI	GAGCTC	1 cut(s)	1233
Psp5II	RGGWCCY	1 cut(s)	757
Psp6I	CCWGG	3 cut(s)	341, 1183, 1366
PspFI	CCCAGC	2 cut(s)	760, 1084
PspGI	CCWGG	3 cut(s)	341, 1183, 1366
PspN4I	GGNNCC	5 cut(s)	147, 160, 193, 759, 1484
PspOMI	GGGCCC	1 cut(s)	191
PspPI	GGNCC	5 cut(s)	191, 192, 397, 757, 834
PspPPI	RGGWCCY	1 cut(s)	757
PspXI	VCTCGAGB	1 cut(s)	1244
PstI	CTGCAG	1 cut(s)	1270
PstNI	CAGNNNCTG	1 cut(s)	1468
PvuII	CAGCTG	1 cut(s)	764
RruI	TCGCGA	1 cut(s)	1128
RsaI	GTAC	3 cut(s)	294, 1004, 1250
RsaNI	GTAC	3 cut(s)	293, 1003, 1249
RseI	CAYNNNNRTG	3 cut(s)	1146, 1217, 1446
SacI	GAGCTC	1 cut(s)	1233
SalI	GTCGAC	1 cut(s)	1358
SapI	GCTCTTC	1 cut(s)	1452
SaqAI	TTAA	5 cut(s)	632, 684, 851, 1112, 1166
SatI	GCNGC	5 cut(s)	286, 351, 372, 1293, 1469
Sau3AI	GATC	4 cut(s)	514, 530, 727, 1061
Sau96I	GGNCC	5 cut(s)	191, 192, 397, 757, 834
SchI	GAGTC	4 cut(s)	130, 497, 790, 1236
ScrFI	CCNGG	5 cut(s)	343, 400, 959, 1185, 1368
SduI	GDGCHC	3 cut(s)	161, 195, 1233
SfaNI	GCATC	5 cut(s)	1036, 1203, 1211, 1279, 1308
SfcI	CTRYAG	3 cut(s)	214, 336, 1266
Sfr274I	CTCGAG	1 cut(s)	1244
SinI	GGWCC	2 cut(s)	757, 834
SlaI	CTCGAG	1 cut(s)	1244
SmiI	ATTTAAAT	1 cut(s)	1167
SmiMI	CAYNNNNRTG	3 cut(s)	1146, 1217, 1446
SmlI	CTYRAG	3 cut(s)	631, 1244, 1296
SmoI	CTYRAG	3 cut(s)	631, 1244, 1296
Sse9I	AATT	8 cut(s)	32, 608, 769, 838, 914, 1079, 1109, 1337
SsiI	CCGC	3 cut(s)	37, 285, 512
SspMI	CTAG	3 cut(s)	81, 375, 447
SstI	GAGCTC	1 cut(s)	1233
StyD4I	CCNGG	5 cut(s)	341, 398, 957, 1183, 1366
SwaI	ATTTAAAT	1 cut(s)	1167
TaaI	ACNGT	4 cut(s)	314, 551, 692, 890
TaiI	ACGT	2 cut(s)	503, 1407
TaqI	TCGA	8 cut(s)	62, 726, 1064, 1205, 1233, 1245, 1359, 1376
TasI	AATT	8 cut(s)	32, 608, 769, 838, 914, 1079, 1109, 1337
TatI	WGTACW	2 cut(s)	1002, 1248
TauI	GCSGC	1 cut(s)	288
TfiI	GAWTC	6 cut(s)	59, 271, 812, 964, 971, 1378
Tru1I	TTAA	5 cut(s)	632, 684, 851, 1112, 1166
Tru9I	TTAA	5 cut(s)	632, 684, 851, 1112, 1166
TscAI	CASTG	1 cut(s)	948
TseFI	GTSAC	2 cut(s)	456, 598
TseI	GCWGC	4 cut(s)	350, 371, 1292, 1468
Tsp45I	GTSAC	2 cut(s)	456, 598
TspDTI	ATGAA	3 cut(s)	1070, 1126, 1467
TspGWI	ACGGA	1 cut(s)	1407
TspRI	CASTG	1 cut(s)	948
Van91I	CCANNNNNTGG	1 cut(s)	1190
Vha464I	CTTAAG	1 cut(s)	631
VpaK11BI	GGWCC	2 cut(s)	757, 834
XapI	RAATTY	2 cut(s)	769, 914
XceI	RCATGY	1 cut(s)	1255
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1127
XhoI	CTCGAG	1 cut(s)	1244
XmiI	GTMKAC	2 cut(s)	213, 1359
XmnI	GAANNNNTTC	2 cut(s)	270, 953
XspI	CTAG	3 cut(s)	81, 375, 447
Zsp2I	ATGCAT	3 cut(s)	1204, 1257, 1323

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.