Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0002443

Physical Location & Seq

Genomic Coordinates Reverse (-)

3329564 .. 3330772

Gene Structure 1209 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1047700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1209 bp

ATGGATGGAGTAAGTAGCACAGAAGAGAGCACAACCAGTGACTCCATATCCATTTCGCCACCCCATCATATTGTTACACGTGTGGAGCCACTTGCCAAGTCAGCGCCCCAAGTGGACAGCCTCTGCCGCGTCGGCAGCGGGGCCAGCAGCGTGATTCTCGACTCCGACCTCAGCAGCGGCGGCGGCGGCACTGGTGGCGTGGAGGCCGAGTCCCGGAAGCTCCCTTCCTCCAAGTACAAAGGCGTGGTCCCACAGCCCAACGGCCGTTGGGGGGCCCAGATTTACGAGAAGCACCAGCGCGTCTGGCTGGGCACCTTCAACGAAGAGGACGAGGCCGCTACGGCCTACGACGTTGCTGCACAGCGCTTCCGCGGCCGCGACGCTGTCACCAACTTTAAGCCCTCCTCTGACGACGAAGAAAACGACGACGTCGAGGCCGCGTTTCTGAGCTCCCACTCCAAGTCTGAAATCGTCGACATGCTGCGAAAGCACACGTACAATGACGAACTGGAACAGAGCAAGCGCAACTACTTCTCTTACGGGAAGCGGGGCCAGTCCAACGGGCCGCTGGGCTTGTTCGGGACGGACAACAGTCGCGTCCAGAAAGCGCGTGAGCAGCTGTTCGAGAAAGCCGTGACCCCCAGCGATGTCGGGAAGCTGAACCGCCTCGTGATCCCGAAGCAGCACGCCGAAAAGCACTTTCCGTTGCAAAGCGGAAGCACTGCAACCATAACGGTAAGTGCATCTTCCGCTTGCAAAGGAGTGCTTTTGAATTTTGAGGATGTCGGGGGAAAAGTGTGGAGGTTTCGATACTCTTACTGGAACAGCAGTCAAAGCTACGTGTTGACCAAAGGATGGAGCCGGTTCGTGAAGGAGAAGAATCTGAAGGCCGGGGACATTGTGAGCTTTCAGAGGTCAACCGGACCGGACAAACATCTGTATATTGATTGGAAGACCAGGATGAGTGTGTATAATAACAGTAATGGGTCGAACCCGGTTCAAGGTCAGGTTGCACCGGTTCAGATGGTTCGGCTATTTGGGGTCAACATATTCAAAATACCTGGGAGTAGCGGGGCTGGCCCAGTGGATGCTGCAGCTGCTGCTGCTATTGGCGGCGGTTGCAATAATAATATCGGCAAAAGAATGAGAGAGATGGAGTTTTTGAAATTAGAGTTTAGCAAGAAGCCTAGGATCATCGGAGCTTTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0001067 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009648 GO:0009719 GO:0009725 GO:0009741 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009910 GO:0010033 GO:0010228 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0014070 GO:0019219 GO:0019222 GO:0022414 GO:0022622 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0045892 GO:0045934 GO:0048364 GO:0048366 GO:0048367 GO:0048519 GO:0048523 GO:0048527 GO:0048528 GO:0048573 GO:0048580 GO:0048581 GO:0048608 GO:0048731 GO:0048827 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051171 GO:0051172 GO:0051239 GO:0051241 GO:0051252 GO:0051253 GO:0060255 GO:0061458 GO:0065007 GO:0080090 GO:0090696 GO:0097159 GO:0099402 GO:0140110 GO:1901363 GO:1901700 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000242 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2 B3

Protein Analysis

403

Amino Acids

43.87

Weight (kDa)

9.1

Isoelectric Point (pI)

39.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AP2	PF00847	77 - 125	1.6e-08	AP2 domain
B3	PF02362	208 - 315	1.8e-25	B3 DNA binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13260 AT1G25560 AT1G68840 AT1G68840 AT3G25730
fragaria_vesca	FvH4_4g28030 FvH4_6g45390
malus_domestica	MD09G1070900.v1.1 MD09G1083900.v1.1 MD09G1084000.v1.1 MD09G1084100.v1.1 MD09G1088400.v1.1 MD13G1046100.v1.1 MD16G1047700.v1.1 MD17G1073700.v1.1 MD17G1073800.v1.1
prunus_persica	Prupe.1G305900_v2.0.a1 Prupe.3G240000_v2.0.a1
pyrus_communis	pycom09g01430 pycom16g04170
rosa_chinensis	RchiOBHm_Chr2g0163201 RchiOBHm_Chr4g0435771
rosa_laevigata	RLG00000006560 RLG00000021381
rosa_multiflora	Rmu_sc0002045.1_g000037 Rmu_ssc0000471.1_g000001
rosa_roxburghii	Rroxscaffold_2G00087470 Rroxscaffold_5G00376950
rosa_rugosa	Rorug02G0501100 Rorug02G0501200 Rorug04G0289500
rosa_samantha	Rh2AG567700 Rh2BG579800 Rh2CG549700 Rh2DG590100 Rh4AG343800 Rh4BG352500 Rh4CG367000 Rh4DG346400
rosa_wichuraiana	Rw2G047000 Rw4G030020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	432
AccB1I	GGYRCC	1 cut(s)	311
AccB7I	CCANNNNNTGG	1 cut(s)	855
AccI	GTMKAC	1 cut(s)	474
AccII	CGCG	7 cut(s)	129, 300, 372, 378, 440, 597, 610
AclWI	GGATC	2 cut(s)	667, 1199
AcoI	YGGCCR	2 cut(s)	262, 373
AcsI	RAATTY	1 cut(s)	772
AcuI	CTGAAG	1 cut(s)	905
AcvI	CACGTG	1 cut(s)	80
AcyI	GRCGYC	1 cut(s)	429
AfaI	GTAC	2 cut(s)	236, 497
AfeI	AGCGCT	1 cut(s)	365
AfiI	CCNNNNNNNGG	4 cut(s)	213, 271, 855, 1001
AflIII	ACRYGT	4 cut(s)	77, 79, 492, 840
AgeI	ACCGGT	1 cut(s)	1015
AgsI	TTSAA	5 cut(s)	319, 772, 1001, 1054, 1165
AjnI	CCWGG	2 cut(s)	956, 1060
AluBI	AGCT	8 cut(s)	220, 450, 619, 658, 837, 906, 1097, 1202
AluI	AGCT	8 cut(s)	220, 450, 619, 658, 837, 906, 1097, 1202
Alw21I	GWGCWC	2 cut(s)	32, 452
AlwI	GGATC	2 cut(s)	667, 1199
AlwNI	CAGNNNCTG	2 cut(s)	123, 1100
Aor51HI	AGCGCT	1 cut(s)	365
ApaI	GGGCCC	1 cut(s)	277
ApoI	RAATTY	1 cut(s)	772
ArsI	GACNNNNNNTTYG	2 cut(s)	231, 263
AsiGI	ACCGGT	1 cut(s)	1015
AspA2I	CCTAGG	1 cut(s)	1187
AspLEI	GCGC	5 cut(s)	106, 300, 366, 525, 610
AspS9I	GGNCC	8 cut(s)	141, 247, 273, 274, 550, 563, 923, 1079
AsuC2I	CCSGG	3 cut(s)	214, 892, 995
AsuHPI	GGTGA	1 cut(s)	379
AvaII	GGWCC	2 cut(s)	247, 923
AvrII	CCTAGG	1 cut(s)	1187
BaeGI	GKGCMC	2 cut(s)	277, 314
BanI	GGYRCC	1 cut(s)	311
BanII	GRGCYC	2 cut(s)	277, 452
BauI	CACGAG	1 cut(s)	668
BbrPI	CACGTG	1 cut(s)	80
BbsI	GAAGAC	1 cut(s)	959
Bbv12I	GWGCWC	2 cut(s)	32, 452
BbvCI	CCTCAGC	1 cut(s)	170
BccI	CCATC	4 cut(s)	72, 849, 1018, 1147
BceAI	ACGGC	4 cut(s)	249, 277, 357, 617
BcgI	CGANNNNNNTGC	2 cut(s)	338, 372
BciT130I	CCWGG	2 cut(s)	958, 1062
BcnI	CCSGG	3 cut(s)	214, 892, 995
BfaI	CTAG	1 cut(s)	1188
BfmI	CTRYAG	1 cut(s)	1092
BfoI	RGCGCY	2 cut(s)	107, 367
BglI	GCCNNNNNGGC	2 cut(s)	132, 341
BlnI	CCTAGG	1 cut(s)	1187
Bme1390I	CCNGG	5 cut(s)	214, 892, 958, 995, 1062
Bme18I	GGWCC	2 cut(s)	247, 923
BmgT120I	GGNCC	8 cut(s)	141, 247, 273, 274, 550, 563, 923, 1079
BmiI	GGNNCC	8 cut(s)	87, 142, 249, 274, 275, 313, 551, 860
BmrFI	CCNGG	5 cut(s)	214, 892, 958, 995, 1062
BmrI	ACTGGG	1 cut(s)	1076
BmsI	GCATC	2 cut(s)	752, 1078
BmuI	ACTGGG	1 cut(s)	1076
BoxI	GACNNNNGTC	1 cut(s)	591
BpiI	GAAGAC	1 cut(s)	959
Bpu10I	CCTNAGC	1 cut(s)	170
BpuMI	CCSGG	3 cut(s)	214, 892, 995
BsaAI	YACGTR	3 cut(s)	80, 495, 841
BsaHI	GRCGYC	1 cut(s)	429
BsaJI	CCNNGG	4 cut(s)	370, 891, 1061, 1187
BsaWI	WCCGGW	3 cut(s)	920, 925, 1015
BsaXI	ACNNNNNCTCC	2 cut(s)	194, 224
Bsc4I	CCNNNNNNNGG	4 cut(s)	213, 271, 855, 1001
Bse118I	RCCGGY	2 cut(s)	861, 1015
Bse1I	ACTGG	6 cut(s)	36, 196, 513, 553, 824, 1082
BseBI	CCWGG	2 cut(s)	958, 1062
BseDI	CCNNGG	4 cut(s)	370, 891, 1061, 1187
BseGI	GGATG	5 cut(s)	10, 787, 860, 966, 1093
BseLI	CCNNNNNNNGG	4 cut(s)	213, 271, 855, 1001
BseMII	CTCAG	2 cut(s)	184, 437
BseNI	ACTGG	6 cut(s)	36, 196, 513, 553, 824, 1082
BseRI	GAGGAG	1 cut(s)	394
BseSI	GKGCMC	2 cut(s)	277, 314
BseX3I	CGGCCG	2 cut(s)	262, 373
BseYI	CCCAGC	3 cut(s)	307, 568, 641
BsgI	GTGCAG	1 cut(s)	342
Bsh1236I	CGCG	7 cut(s)	129, 300, 372, 378, 440, 597, 610
Bsh1285I	CGRYCG	2 cut(s)	265, 376
BshNI	GGYRCC	1 cut(s)	311
BshTI	ACCGGT	1 cut(s)	1015
BsiEI	CGRYCG	2 cut(s)	265, 376
BsiHKAI	GWGCWC	2 cut(s)	32, 452
BsiSI	CCGG	7 cut(s)	214, 862, 891, 921, 926, 995, 1016
BslFI	GGGAC	4 cut(s)	196, 233, 595, 908
BslI	CCNNNNNNNGG	4 cut(s)	213, 271, 855, 1001
BsmFI	GGGAC	4 cut(s)	196, 233, 595, 908
Bsp120I	GGGCCC	1 cut(s)	273
Bsp1286I	GDGCHC	4 cut(s)	32, 277, 314, 452
Bsp143I	GATC	2 cut(s)	672, 1191
BspCNI	CTCAG	2 cut(s)	183, 438
BspFNI	CGCG	7 cut(s)	129, 300, 372, 378, 440, 597, 610
BspLI	GGNNCC	8 cut(s)	87, 142, 249, 274, 275, 313, 551, 860
BspMAI	CTGCAG	1 cut(s)	1096
BspPI	GGATC	2 cut(s)	667, 1199
BspT107I	GGYRCC	1 cut(s)	311
BsrFI	RCCGGY	2 cut(s)	861, 1015
BsrI	ACTGG	6 cut(s)	36, 196, 513, 553, 824, 1082
BssAI	RCCGGY	2 cut(s)	861, 1015
BssECI	CCNNGG	4 cut(s)	370, 891, 1061, 1187
BssMI	GATC	2 cut(s)	672, 1191
BssNI	GRCGYC	1 cut(s)	429
BssSI	CACGAG	1 cut(s)	668
BssT1I	CCWWGG	1 cut(s)	1187
Bst2BI	CACGAG	1 cut(s)	668
Bst2UI	CCWGG	2 cut(s)	958, 1062
Bst4CI	ACNGT	3 cut(s)	593, 736, 980
Bst6I	CTCTTC	2 cut(s)	18, 318
BstACI	GRCGYC	1 cut(s)	429
BstAPI	GCANNNNNTGC	1 cut(s)	1100
BstBAI	YACGTR	3 cut(s)	80, 495, 841
BstC8I	GCNNGC	5 cut(s)	145, 521, 687, 754, 1078
BstDEI	CTNAG	2 cut(s)	170, 446
BstDSI	CCRYGG	1 cut(s)	370
BstF5I	GGATG	5 cut(s)	10, 787, 860, 966, 1093
BstFNI	CGCG	7 cut(s)	129, 300, 372, 378, 440, 597, 610
BstH2I	RGCGCY	2 cut(s)	107, 367
BstHHI	GCGC	5 cut(s)	106, 300, 366, 525, 610
BstKTI	GATC	2 cut(s)	675, 1194
BstMBI	GATC	2 cut(s)	672, 1191
BstMCI	CGRYCG	2 cut(s)	265, 376
BstNI	CCWGG	2 cut(s)	958, 1062
BstNSI	RCATGY	1 cut(s)	481
BstPAI	GACNNNNGTC	1 cut(s)	591
BstSCI	CCNGG	5 cut(s)	212, 890, 956, 993, 1060
BstSFI	CTRYAG	1 cut(s)	1092
BstSLI	GKGCMC	2 cut(s)	277, 314
BstUI	CGCG	7 cut(s)	129, 300, 372, 378, 440, 597, 610
BstV2I	GAAGAC	1 cut(s)	959
BstZI	CGGCCG	2 cut(s)	262, 373
BtgI	CCRYGG	1 cut(s)	370
BtgZI	GCGATG	1 cut(s)	660
BtsCI	GGATG	5 cut(s)	10, 787, 860, 966, 1093
BtsI	GCAGTG	1 cut(s)	720
BtsIMutI	CAGTG	4 cut(s)	43, 189, 720, 1089
Cac8I	GCNNGC	5 cut(s)	145, 521, 687, 754, 1078
CaiI	CAGNNNCTG	2 cut(s)	123, 1100
CciNI	GCGGCCGC	1 cut(s)	373
CfoI	GCGC	5 cut(s)	106, 300, 366, 525, 610
Cfr10I	RCCGGY	2 cut(s)	861, 1015
Cfr13I	GGNCC	8 cut(s)	141, 247, 273, 274, 550, 563, 923, 1079
Cfr42I	CCGCGG	1 cut(s)	373
CpoI	CGGWCCG	1 cut(s)	923
CseI	GACGC	4 cut(s)	118, 289, 389, 586
Csp6I	GTAC	2 cut(s)	235, 496
CspAI	ACCGGT	1 cut(s)	1015
CspI	CGGWCCG	1 cut(s)	923
CviAII	CATG	1 cut(s)	478
CviQI	GTAC	2 cut(s)	235, 496
DdeI	CTNAG	2 cut(s)	170, 446
DpnI	GATC	2 cut(s)	674, 1193
DpnII	GATC	2 cut(s)	672, 1191
EaeI	YGGCCR	2 cut(s)	262, 373
EagI	CGGCCG	2 cut(s)	262, 373
Eam1104I	CTCTTC	2 cut(s)	18, 318
EarI	CTCTTC	2 cut(s)	18, 318
Ecl136II	GAGCTC	1 cut(s)	450
EclXI	CGGCCG	2 cut(s)	262, 373
Eco130I	CCWWGG	1 cut(s)	1187
Eco24I	GRGCYC	2 cut(s)	277, 452
Eco47I	GGWCC	2 cut(s)	247, 923
Eco47III	AGCGCT	1 cut(s)	365
Eco52I	CGGCCG	2 cut(s)	262, 373
Eco53kI	GAGCTC	1 cut(s)	450
Eco57I	CTGAAG	1 cut(s)	905
Eco72I	CACGTG	1 cut(s)	80
EcoICRI	GAGCTC	1 cut(s)	450
EcoO109I	RGGNCCY	1 cut(s)	273
EcoRII	CCWGG	2 cut(s)	956, 1060
EcoT14I	CCWWGG	1 cut(s)	1187
EcoT38I	GRGCYC	2 cut(s)	277, 452
ErhI	CCWWGG	1 cut(s)	1187
FaeI	CATG	1 cut(s)	481
FaiI	YATR	7 cut(s)	47, 69, 479, 731, 942, 972, 1049
FalI	AAGNNNNNCTT	4 cut(s)	730, 762, 750, 782
FaqI	GGGAC	4 cut(s)	196, 233, 595, 908
FatI	CATG	1 cut(s)	477
FauI	CCCGC	3 cut(s)	131, 540, 1064
FblI	GTMKAC	1 cut(s)	474
FokI	GGATG	5 cut(s)	17, 794, 867, 973, 1100
FriOI	GRGCYC	2 cut(s)	277, 452
FspBI	CTAG	1 cut(s)	1188
GlaI	GCGC	5 cut(s)	105, 299, 365, 524, 609
GsaI	CCCAGC	3 cut(s)	311, 572, 645
HaeII	RGCGCY	2 cut(s)	107, 367
HapII	CCGG	7 cut(s)	214, 862, 891, 921, 926, 995, 1016
HgaI	GACGC	4 cut(s)	118, 289, 389, 586
HhaI	GCGC	5 cut(s)	106, 300, 366, 525, 610
Hin1I	GRCGYC	1 cut(s)	429
Hin1II	CATG	1 cut(s)	481
Hin6I	GCGC	5 cut(s)	104, 298, 364, 523, 608
HinP1I	GCGC	5 cut(s)	104, 298, 364, 523, 608
HincII	GTYRAC	4 cut(s)	475, 846, 918, 1045
HindII	GTYRAC	4 cut(s)	475, 846, 918, 1045
HinfI	GANTC	5 cut(s)	41, 154, 161, 209, 880
HpaII	CCGG	7 cut(s)	214, 862, 891, 921, 926, 995, 1016
HphI	GGTGA	1 cut(s)	379
Hpy166II	GTNNAC	5 cut(s)	115, 475, 846, 918, 1045
Hpy188I	TCNGA	8 cut(s)	166, 409, 447, 466, 885, 912, 1023, 1199
Hpy188III	TCNNGA	8 cut(s)	158, 580, 601, 625, 652, 670, 676, 868
Hpy8I	GTNNAC	5 cut(s)	115, 475, 846, 918, 1045
Hpy99I	CGWCG	8 cut(s)	134, 353, 383, 416, 428, 431, 434, 476
HpyAV	CCTTC	4 cut(s)	234, 325, 865, 880
HpyCH4III	ACNGT	3 cut(s)	593, 736, 980
HpyCH4IV	ACGT	5 cut(s)	79, 351, 429, 494, 840
HpyCH4V	TGCA	8 cut(s)	359, 709, 725, 743, 756, 1013, 1094, 1122
HpyF3I	CTNAG	2 cut(s)	170, 446
HpySE526I	ACGT	5 cut(s)	79, 351, 429, 494, 840
Hsp92I	GRCGYC	1 cut(s)	429
Hsp92II	CATG	1 cut(s)	481
HspAI	GCGC	5 cut(s)	104, 298, 364, 523, 608
KspI	CCGCGG	1 cut(s)	373
Kzo9I	GATC	2 cut(s)	672, 1191
LmnI	GCTCC	5 cut(s)	85, 225, 455, 858, 1199
LweI	GCATC	2 cut(s)	752, 1078
MaeI	CTAG	1 cut(s)	1188
MaeII	ACGT	5 cut(s)	79, 351, 429, 494, 840
MaeIII	GTNAC	4 cut(s)	38, 73, 385, 634
MalI	GATC	2 cut(s)	674, 1193
MboI	GATC	2 cut(s)	672, 1191
MboII	GAAGA	6 cut(s)	35, 335, 428, 738, 889, 964
MhlI	GDGCHC	4 cut(s)	32, 277, 314, 452
MluCI	AATT	2 cut(s)	772, 1166
MlyI	GAGTC	3 cut(s)	35, 155, 218
MmeI	TCCRAC	2 cut(s)	189, 582
MseI	TTAA	1 cut(s)	396
MspA1I	CMGCKG	6 cut(s)	138, 177, 372, 568, 619, 1097
MspI	CCGG	7 cut(s)	214, 862, 891, 921, 926, 995, 1016
MspR9I	CCNGG	5 cut(s)	214, 892, 958, 995, 1062
MvaI	CCWGG	2 cut(s)	958, 1062
MvnI	CGCG	7 cut(s)	129, 300, 372, 378, 440, 597, 610
NciI	CCSGG	3 cut(s)	214, 892, 995
NdeII	GATC	2 cut(s)	672, 1191
NlaIII	CATG	1 cut(s)	481
NlaIV	GGNNCC	8 cut(s)	87, 142, 249, 274, 275, 313, 551, 860
NmeAIII	GCCGAG	1 cut(s)	232
NmuCI	GTSAC	3 cut(s)	38, 385, 634
NotI	GCGGCCGC	1 cut(s)	373
NspI	RCATGY	1 cut(s)	481
PcsI	WCGNNNNNNNCGW	4 cut(s)	327, 420, 429, 630
PfeI	GAWTC	2 cut(s)	154, 880
PflFI	GACNNNGTC	2 cut(s)	383, 428
PflMI	CCANNNNNTGG	1 cut(s)	855
PfoI	TCCNGGA	1 cut(s)	212
PinAI	ACCGGT	1 cut(s)	1015
PleI	GAGTC	3 cut(s)	35, 155, 217
PmaCI	CACGTG	1 cut(s)	80
PmlI	CACGTG	1 cut(s)	80
PpsI	GAGTC	3 cut(s)	35, 155, 217
Ppu21I	YACGTR	3 cut(s)	80, 495, 841
PshAI	GACNNNNGTC	1 cut(s)	591
Psp124BI	GAGCTC	1 cut(s)	452
Psp6I	CCWGG	2 cut(s)	956, 1060
PspCI	CACGTG	1 cut(s)	80
PspFI	CCCAGC	3 cut(s)	307, 568, 641
PspGI	CCWGG	2 cut(s)	956, 1060
PspN4I	GGNNCC	8 cut(s)	87, 142, 249, 274, 275, 313, 551, 860
PspOMI	GGGCCC	1 cut(s)	273
PspPI	GGNCC	8 cut(s)	141, 247, 273, 274, 550, 563, 923, 1079
PstI	CTGCAG	1 cut(s)	1096
PstNI	CAGNNNCTG	2 cut(s)	123, 1100
PsyI	GACNNNGTC	2 cut(s)	383, 428
PvuII	CAGCTG	2 cut(s)	619, 1097
RsaI	GTAC	2 cut(s)	236, 497
RsaNI	GTAC	2 cut(s)	235, 496
Rsr2I	CGGWCCG	1 cut(s)	923
RsrII	CGGWCCG	1 cut(s)	923
SacI	GAGCTC	1 cut(s)	452
SacII	CCGCGG	1 cut(s)	373
SalI	GTCGAC	1 cut(s)	473
SaqAI	TTAA	1 cut(s)	396
Sau3AI	GATC	2 cut(s)	672, 1191
Sau96I	GGNCC	8 cut(s)	141, 247, 273, 274, 550, 563, 923, 1079
SchI	GAGTC	3 cut(s)	35, 155, 218
ScrFI	CCNGG	5 cut(s)	214, 892, 958, 995, 1062
SduI	GDGCHC	4 cut(s)	32, 277, 314, 452
SfaNI	GCATC	2 cut(s)	752, 1078
SfcI	CTRYAG	1 cut(s)	1092
SfiI	GGCCNNNNNGGCC	1 cut(s)	341
Sfr303I	CCGCGG	1 cut(s)	373
SgrBI	CCGCGG	1 cut(s)	373
SinI	GGWCC	2 cut(s)	247, 923
Sse9I	AATT	2 cut(s)	772, 1166
SspMI	CTAG	1 cut(s)	1188
SstI	GAGCTC	1 cut(s)	452
StyD4I	CCNGG	5 cut(s)	212, 890, 956, 993, 1060
StyI	CCWWGG	1 cut(s)	1187
TaaI	ACNGT	3 cut(s)	593, 736, 980
TaiI	ACGT	5 cut(s)	82, 354, 432, 497, 843
TaqI	TCGA	6 cut(s)	159, 432, 474, 624, 808, 989
TasI	AATT	2 cut(s)	772, 1166
TatI	WGTACW	1 cut(s)	234
TfiI	GAWTC	2 cut(s)	154, 880
Tru1I	TTAA	1 cut(s)	396
Tru9I	TTAA	1 cut(s)	396
TscAI	CASTG	4 cut(s)	43, 196, 727, 1089
TseFI	GTSAC	3 cut(s)	38, 385, 634
Tsp45I	GTSAC	3 cut(s)	38, 385, 634
TspGWI	ACGGA	2 cut(s)	599, 693
TspRI	CASTG	4 cut(s)	43, 196, 727, 1089
Tth111I	GACNNNGTC	2 cut(s)	383, 428
Van91I	CCANNNNNTGG	1 cut(s)	855
VpaK11BI	GGWCC	2 cut(s)	247, 923
XapI	RAATTY	1 cut(s)	772
XceI	RCATGY	1 cut(s)	481
XcmI	CCANNNNNNNNNTGG	1 cut(s)	565
XmaJI	CCTAGG	1 cut(s)	1187
XmiI	GTMKAC	1 cut(s)	474
XspI	CTAG	1 cut(s)	1188
ZraI	GACGTC	1 cut(s)	430

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.