Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002045.1

Orthogroup ID

OG0002443

Physical Location & Seq

Genomic Coordinates Forward (+)

190901 .. 196421

Gene Structure 5521 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002045.1_g000037.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2169 bp

atggatttgatgagcagtttcaatgagaatgcaagcgattcaaattccaagttaccttcttcacggtacaaaggagtagtcccgcagcctaatggccgttggggagcgcagatatacgagaagcaccagagagtatggttgggaacgttcaaaggagaagaagaagctgccaaggcatacgacattgcttcacaaaggttccgaggcctcgatgccatcacgaacttcaagcaatcctcatggagtgccaccatagatgatcatgaagatgacgccttcttcttgcagtcacattccaaggccgagatcgttgacatgcttcgaaaacactcctacaccaatgagctagagctgttcaagcacaagaatcgtggcaagagaataaagtaccgtaacattgatttgatggacattcatattcagaaggaatggctgttcgagaaggtgctaacaccaagcgatgtggggaggctaaaccggtttgtcataccgaaacaacaagccgagaagcattttccgttgatggattctgaagctaagggagcgttgctaaattttgaggatgatttggggaatgtgtggaggtttaggtattgtttttggagtagcagtcggagttatgtgttgacaaaagggtggactcggtttgtgaaggagaagaagctgaaagggggtgatgtaattaggtttcatggatcaattatgggagaggataagaagttgttcattgagtgtgggccaagaaacatcgacgacgaggtttcgggttttcgggagaggactggtacggtcgatgagccgttaatggcgccgggtcgagatcacgatagagtggattttgacccaggttggagggcttttcgacggtggggtggctggtggcgtcaatctctggtgcctaggtgggttagcgttggtggtctagatttgaactgtggacctagaatgttgtatgcagtggtctccattggagagtggtggtggagaactggtgttgttggggtcttgctctttgagtcatttcgctggttcaggtcgagtatggctcttcgcttctatcaggcggcagtgttggtatggaagactgatggtgggcgattggcgtggtggaaggagccagaggccagatcatggcagcggtacgccatggatcgtatggcattgacttctactctacggtgtgttgctagacggaggcggcagctgtggtggatttgggctatcaagctggtgggcatggcggcggcaaggtacgataattttttcactgatttctcggtgatagaattggtgtggcttaccgcatggtatcatcgacttggggtgctcgaagacatagaattgaggtggtggcatgccggccgggtacctgatgacaaggaagaggagtactgccgcaacgtttctctatttttgtttagagtcttgtttttgggttgggtcaaattgatgtgccatggaggtggtgtctttcctggggatgagttgatttattttcggttttatcttatggtcaatgtgctgacaagcgatccttgcacgtggtctggcttcattgggatgtggtgtggaagagggcgttgttggttaggggttgagctcttttggctcatggaagtcattcttgatgacggaccggattttgacccaggttggagggcttttcgacggtggggtggctggtggcgtcaatctctggtgcctaggtgggttagcgttggtggtctagatttgaactgtggacctagaatgttgtatgcagtggtctccattggagagtggtggtggagaactggtgttgttggtagtggagggatggtactaatgttgtgttggtggcagtcttcatgctggcagtggtggaaggttggtggaaggctgggagggggggagactgattcagaacagttggtacgaggaggtcttttgcggttcatgtctgacgtgcgagaggttgccggcgttcacactacttcgacgacgaaatccaatggtaggccggtgttggtttcttggcaaaaggatatggtttgtgattgtcttattttgtttgttattaggtttcggtttttaagtagtttggtgtcaataagtccctactttgagtttgggttgttcccttattctcttgagctaaggttgggtctagttattatgccatgtaaatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AP2 B3

Protein Analysis

722

Amino Acids

84.38

Weight (kDa)

9.09

Isoelectric Point (pI)

48.19

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002443)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G13260 AT1G25560 AT1G68840 AT1G68840 AT3G25730
fragaria_vesca	FvH4_4g28030 FvH4_6g45390
malus_domestica	MD09G1070900.v1.1 MD09G1083900.v1.1 MD09G1084000.v1.1 MD09G1084100.v1.1 MD09G1088400.v1.1 MD13G1046100.v1.1 MD16G1047700.v1.1 MD17G1073700.v1.1 MD17G1073800.v1.1
prunus_persica	Prupe.1G305900_v2.0.a1 Prupe.3G240000_v2.0.a1
pyrus_communis	pycom09g01430 pycom16g04170
rosa_chinensis	RchiOBHm_Chr2g0163201 RchiOBHm_Chr4g0435771
rosa_laevigata	RLG00000006560 RLG00000021381
rosa_multiflora	Rmu_sc0002045.1_g000037 Rmu_ssc0000471.1_g000001
rosa_roxburghii	Rroxscaffold_2G00087470 Rroxscaffold_5G00376950
rosa_rugosa	Rorug02G0501100 Rorug02G0501200 Rorug04G0289500
rosa_samantha	Rh2AG567700 Rh2BG579800 Rh2CG549700 Rh2DG590100 Rh4AG343800 Rh4BG352500 Rh4CG367000 Rh4DG346400
rosa_wichuraiana	Rw2G047000 Rw4G030020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1366
AccB1I	GGYRCC	4 cut(s)	808, 895, 1366, 1699
AccB7I	CCANNNNNTGG	1 cut(s)	1131
AciI	CCGC	9 cut(s)	83, 1064, 1138, 1198, 1241, 1244, 1302, 1396, 1930
AclI	AACGTT	2 cut(s)	146, 1401
AclWI	GGATC	3 cut(s)	703, 1158, 1526
AcoI	YGGCCR	2 cut(s)	94, 1360
AcsI	RAATTY	2 cut(s)	43, 553
AcuI	CTGAAG	1 cut(s)	552
AcvI	CACGTG	1 cut(s)	1542
AcyI	GRCGYC	4 cut(s)	273, 809, 883, 1687
AfaI	GTAC	9 cut(s)	68, 389, 787, 1142, 1253, 1368, 1391, 1821, 1914
AfiI	CCNNNNNNNGG	2 cut(s)	1131, 1995
AgeI	ACCGGT	1 cut(s)	477
AgsI	TTSAA	7 cut(s)	22, 42, 151, 229, 358, 931, 1735
AjiI	CACGTC	1 cut(s)	1945
AjnI	CCWGG	3 cut(s)	844, 1474, 1648
AloI	GAACNNNNNNTCC	2 cut(s)	419, 451
AluBI	AGCT	9 cut(s)	167, 346, 352, 536, 664, 1204, 1228, 1600, 2134
AluI	AGCT	9 cut(s)	167, 346, 352, 536, 664, 1204, 1228, 1600, 2134
Alw21I	GWGCWC	2 cut(s)	1329, 1602
Alw26I	GTCTC	3 cut(s)	967, 1771, 1886
AlwI	GGATC	3 cut(s)	703, 1158, 1526
AoxI	GGCC	7 cut(s)	94, 205, 300, 737, 1122, 1360, 1997
ApeKI	GCWGC	4 cut(s)	85, 167, 1135, 1201
ApoI	RAATTY	2 cut(s)	43, 553
ArsI	GACNNNNNNTTYG	2 cut(s)	63, 95
AsiGI	ACCGGT	1 cut(s)	477
Asp700I	GAANNNNTTC	2 cut(s)	722, 1620
Asp718I	GGTACC	1 cut(s)	1366
AspA2I	CCTAGG	2 cut(s)	899, 1703
AspLEI	GCGC	2 cut(s)	109, 811
AspS9I	GGNCC	4 cut(s)	737, 938, 1634, 1742
AsuC2I	CCSGG	2 cut(s)	813, 1364
AsuHPI	GGTGA	2 cut(s)	686, 1291
AsuII	TTCGAA	1 cut(s)	322
AvaII	GGWCC	3 cut(s)	938, 1634, 1742
AvrII	CCTAGG	2 cut(s)	899, 1703
BaeI	ACNNNNGTAYC	2 cut(s)	1811, 1844
BanI	GGYRCC	4 cut(s)	808, 895, 1366, 1699
BanII	GRGCYC	1 cut(s)	1602
BbrPI	CACGTG	1 cut(s)	1542
BbsI	GAAGAC	3 cut(s)	1088, 1338, 1836
Bbv12I	GWGCWC	2 cut(s)	1329, 1602
BbvI	GCAGC	4 cut(s)	97, 154, 1147, 1213
BccI	CCATC	5 cut(s)	224, 400, 517, 1082, 1810
BceAI	ACGGC	2 cut(s)	81, 784
BcgI	CGANNNNNNTGC	2 cut(s)	350, 384
BciT130I	CCWGG	3 cut(s)	846, 1476, 1650
BclI	TGATCA	1 cut(s)	259
BcnI	CCSGG	2 cut(s)	813, 1364
BcoDI	GTCTC	3 cut(s)	967, 1771, 1886
BfaI	CTAG	9 cut(s)	347, 900, 923, 942, 1188, 1704, 1727, 1746, 2147
BfoI	RGCGCY	1 cut(s)	812
BisI	GCNGC	9 cut(s)	86, 168, 1065, 1136, 1199, 1202, 1242, 1245, 1396
BlnI	CCTAGG	2 cut(s)	899, 1703
BlsI	GCNGC	9 cut(s)	87, 169, 1066, 1137, 1200, 1203, 1243, 1246, 1397
BmcAI	AGTACT	1 cut(s)	1391
Bme1390I	CCNGG	5 cut(s)	813, 846, 1364, 1476, 1650
Bme18I	GGWCC	3 cut(s)	938, 1634, 1742
BmgBI	CACGTC	1 cut(s)	1945
BmgT120I	GGNCC	4 cut(s)	737, 938, 1634, 1742
BmiI	GGNNCC	6 cut(s)	200, 810, 897, 1116, 1368, 1701
BmrFI	CCNGG	5 cut(s)	813, 846, 1364, 1476, 1650
BmsI	GCATC	1 cut(s)	202
BpiI	GAAGAC	3 cut(s)	1088, 1338, 1836
BplI	GAGNNNNNCTC	2 cut(s)	1030, 1062
Bpu10I	CCTNAGC	2 cut(s)	537, 2135
Bpu14I	TTCGAA	1 cut(s)	322
BpuEI	CTTGAG	1 cut(s)	2150
BpuMI	CCSGG	2 cut(s)	813, 1364
BsaAI	YACGTR	1 cut(s)	1542
BsaHI	GRCGYC	4 cut(s)	273, 809, 883, 1687
BsaI	GGTCTC	2 cut(s)	967, 1771
BsaWI	WCCGGW	2 cut(s)	477, 1636
Bsc4I	CCNNNNNNNGG	2 cut(s)	1131, 1995
Bse118I	RCCGGY	4 cut(s)	477, 1358, 1958, 1999
Bse1I	ACTGG	3 cut(s)	787, 994, 1798
Bse3DI	GCAATG	1 cut(s)	183
BseBI	CCWGG	3 cut(s)	846, 1476, 1650
BseGI	GGATG	4 cut(s)	568, 1486, 1566, 1821
BseLI	CCNNNNNNNGG	2 cut(s)	1131, 1995
BseMI	GCAATG	1 cut(s)	183
BseNI	ACTGG	3 cut(s)	787, 994, 1798
BseRI	GAGGAG	2 cut(s)	1400, 1932
BseX3I	CGGCCG	1 cut(s)	1360
BseXI	GCAGC	4 cut(s)	97, 154, 1147, 1213
BseYI	CCCAGC	1 cut(s)	1879
Bsh1285I	CGRYCG	2 cut(s)	792, 1363
BshFI	GGCC	7 cut(s)	96, 207, 302, 739, 1124, 1362, 1999
BshNI	GGYRCC	4 cut(s)	808, 895, 1366, 1699
BshTI	ACCGGT	1 cut(s)	477
BsiEI	CGRYCG	2 cut(s)	792, 1363
BsiHKAI	GWGCWC	2 cut(s)	1329, 1602
BsiSI	CCGG	7 cut(s)	478, 812, 1359, 1363, 1637, 1959, 2000
BslFI	GGGAC	2 cut(s)	65, 2079
BslI	CCNNNNNNNGG	2 cut(s)	1131, 1995
BsmAI	GTCTC	3 cut(s)	967, 1771, 1886
BsmFI	GGGAC	2 cut(s)	65, 2079
BsmI	GAATGC	1 cut(s)	34
BsnI	GGCC	7 cut(s)	96, 207, 302, 739, 1124, 1362, 1999
Bso31I	GGTCTC	2 cut(s)	967, 1771
Bsp119I	TTCGAA	1 cut(s)	322
Bsp1286I	GDGCHC	2 cut(s)	1329, 1602
Bsp143I	GATC	7 cut(s)	259, 306, 695, 820, 1127, 1150, 1531
Bsp19I	CCATGG	2 cut(s)	1146, 1456
BspACI	CCGC	9 cut(s)	83, 1064, 1138, 1198, 1241, 1244, 1302, 1396, 1930
BspANI	GGCC	7 cut(s)	96, 207, 302, 739, 1124, 1362, 1999
BspHI	TCATGA	1 cut(s)	262
BspLI	GGNNCC	6 cut(s)	200, 810, 897, 1116, 1368, 1701
BspPI	GGATC	3 cut(s)	703, 1158, 1526
BspQI	GCTCTTC	1 cut(s)	1053
BspT104I	TTCGAA	1 cut(s)	322
BspT107I	GGYRCC	4 cut(s)	808, 895, 1366, 1699
BspTNI	GGTCTC	2 cut(s)	967, 1771
BsrDI	GCAATG	1 cut(s)	183
BsrFI	RCCGGY	4 cut(s)	477, 1358, 1958, 1999
BsrI	ACTGG	3 cut(s)	787, 994, 1798
BssAI	RCCGGY	4 cut(s)	477, 1358, 1958, 1999
BssMI	GATC	7 cut(s)	259, 306, 695, 820, 1127, 1150, 1531
BssNI	GRCGYC	4 cut(s)	273, 809, 883, 1687
BssT1I	CCWWGG	6 cut(s)	171, 297, 899, 1146, 1456, 1703
Bst2UI	CCWGG	3 cut(s)	846, 1476, 1650
Bst4CI	ACNGT	9 cut(s)	66, 392, 790, 867, 935, 1179, 1671, 1739, 1908
Bst6I	CTCTTC	3 cut(s)	1053, 1377, 1567
BstACI	GRCGYC	4 cut(s)	273, 809, 883, 1687
BstBAI	YACGTR	1 cut(s)	1542
BstBI	TTCGAA	1 cut(s)	322
BstC8I	GCNNGC	5 cut(s)	34, 1356, 1360, 1853, 1960
BstDEI	CTNAG	2 cut(s)	537, 2135
BstDSI	CCRYGG	2 cut(s)	1146, 1456
BstF5I	GGATG	4 cut(s)	568, 1486, 1566, 1821
BstH2I	RGCGCY	1 cut(s)	812
BstHHI	GCGC	2 cut(s)	109, 811
BstKTI	GATC	7 cut(s)	262, 309, 698, 823, 1130, 1153, 1534
BstMAI	GTCTC	3 cut(s)	967, 1771, 1886
BstMBI	GATC	7 cut(s)	259, 306, 695, 820, 1127, 1150, 1531
BstMCI	CGRYCG	2 cut(s)	792, 1363
BstMWI	GCNNNNNNNGC	5 cut(s)	173, 358, 542, 1536, 1606
BstNI	CCWGG	3 cut(s)	846, 1476, 1650
BstNSI	RCATGY	2 cut(s)	319, 1358
BstSCI	CCNGG	5 cut(s)	811, 844, 1362, 1474, 1648
BstV1I	GCAGC	4 cut(s)	97, 154, 1147, 1213
BstV2I	GAAGAC	3 cut(s)	1088, 1338, 1836
BstXI	CCANNNNNNTGG	1 cut(s)	1463
BstZI	CGGCCG	1 cut(s)	1360
BsuRI	GGCC	7 cut(s)	96, 207, 302, 739, 1124, 1362, 1999
BtgI	CCRYGG	2 cut(s)	1146, 1456
BtgZI	GCGATG	1 cut(s)	474
BtrI	CACGTC	1 cut(s)	1945
BtsCI	GGATG	4 cut(s)	568, 1486, 1566, 1821
BtsI	GCAGTG	4 cut(s)	963, 1074, 1767, 1862
BtsIMutI	CAGTG	5 cut(s)	963, 1074, 1266, 1767, 1862
Cac8I	GCNNGC	5 cut(s)	34, 1356, 1360, 1853, 1960
CciI	TCATGA	1 cut(s)	262
CfoI	GCGC	2 cut(s)	109, 811
Cfr10I	RCCGGY	4 cut(s)	477, 1358, 1958, 1999
Cfr13I	GGNCC	4 cut(s)	737, 938, 1634, 1742
CpoI	CGGWCCG	1 cut(s)	1634
CseI	GACGC	3 cut(s)	281, 872, 1676
Csp6I	GTAC	9 cut(s)	67, 388, 786, 1141, 1252, 1367, 1390, 1820, 1913
CspAI	ACCGGT	1 cut(s)	477
CspCI	CAANNNNNGTGG	4 cut(s)	352, 387, 444, 479
CspI	CGGWCCG	1 cut(s)	1634
CviQI	GTAC	9 cut(s)	67, 388, 786, 1141, 1252, 1367, 1390, 1820, 1913
DdeI	CTNAG	2 cut(s)	537, 2135
DinI	GGCGCC	1 cut(s)	810
DpnI	GATC	7 cut(s)	261, 308, 697, 822, 1129, 1152, 1533
DpnII	GATC	7 cut(s)	259, 306, 695, 820, 1127, 1150, 1531
EaeI	YGGCCR	2 cut(s)	94, 1360
EagI	CGGCCG	1 cut(s)	1360
Eam1104I	CTCTTC	3 cut(s)	1053, 1377, 1567
EarI	CTCTTC	3 cut(s)	1053, 1377, 1567
Ecl136II	GAGCTC	1 cut(s)	1600
EclXI	CGGCCG	1 cut(s)	1360
Eco130I	CCWWGG	6 cut(s)	171, 297, 899, 1146, 1456, 1703
Eco147I	AGGCCT	1 cut(s)	207
Eco24I	GRGCYC	1 cut(s)	1602
Eco31I	GGTCTC	2 cut(s)	967, 1771
Eco47I	GGWCC	3 cut(s)	938, 1634, 1742
Eco52I	CGGCCG	1 cut(s)	1360
Eco53kI	GAGCTC	1 cut(s)	1600
Eco57I	CTGAAG	1 cut(s)	552
Eco72I	CACGTG	1 cut(s)	1542
EcoICRI	GAGCTC	1 cut(s)	1600
EcoRII	CCWGG	3 cut(s)	844, 1474, 1648
EcoT14I	CCWWGG	6 cut(s)	171, 297, 899, 1146, 1456, 1703
EcoT38I	GRGCYC	1 cut(s)	1602
EgeI	GGCGCC	1 cut(s)	810
EheI	GGCGCC	1 cut(s)	810
ErhI	CCWWGG	6 cut(s)	171, 297, 899, 1146, 1456, 1703
FalI	AAGNNNNNCTT	4 cut(s)	1519, 1551, 1608, 1640
FaqI	GGGAC	2 cut(s)	65, 2079
FauI	CCCGC	1 cut(s)	90
FbaI	TGATCA	1 cut(s)	259
Fnu4HI	GCNGC	9 cut(s)	86, 168, 1065, 1136, 1199, 1202, 1242, 1245, 1396
FokI	GGATG	4 cut(s)	575, 1493, 1573, 1828
FriOI	GRGCYC	1 cut(s)	1602
Fsp4HI	GCNGC	9 cut(s)	86, 168, 1065, 1136, 1199, 1202, 1242, 1245, 1396
FspBI	CTAG	9 cut(s)	347, 900, 923, 942, 1188, 1704, 1727, 1746, 2147
GlaI	GCGC	2 cut(s)	108, 810
GluI	GCNGC	9 cut(s)	86, 168, 1065, 1136, 1199, 1202, 1242, 1245, 1396
GsaI	CCCAGC	1 cut(s)	1883
HaeII	RGCGCY	1 cut(s)	812
HaeIII	GGCC	7 cut(s)	96, 207, 302, 739, 1124, 1362, 1999
HapII	CCGG	7 cut(s)	478, 812, 1359, 1363, 1637, 1959, 2000
HgaI	GACGC	3 cut(s)	281, 872, 1676
HhaI	GCGC	2 cut(s)	109, 811
Hin1I	GRCGYC	4 cut(s)	273, 809, 883, 1687
Hin6I	GCGC	2 cut(s)	107, 809
HinP1I	GCGC	2 cut(s)	107, 809
HincII	GTYRAC	2 cut(s)	313, 627
HindII	GTYRAC	2 cut(s)	313, 627
HinfI	GANTC	7 cut(s)	38, 367, 527, 640, 1016, 1422, 1898
HpaII	CCGG	7 cut(s)	478, 812, 1359, 1363, 1637, 1959, 2000
HphI	GGTGA	2 cut(s)	686, 1291
Hpy166II	GTNNAC	6 cut(s)	313, 627, 639, 938, 1742, 1966
Hpy188I	TCNGA	6 cut(s)	203, 423, 532, 615, 1903, 1942
Hpy8I	GTNNAC	6 cut(s)	313, 627, 639, 938, 1742, 1966
Hpy99I	CGWCG	6 cut(s)	755, 758, 867, 1671, 1981, 1984
HpyAV	CCTTC	8 cut(s)	66, 286, 418, 436, 646, 1105, 1858, 1869
HpyCH4III	ACNGT	9 cut(s)	66, 392, 790, 867, 935, 1179, 1671, 1739, 1908
HpyCH4IV	ACGT	4 cut(s)	146, 1401, 1541, 1944
HpyCH4V	TGCA	5 cut(s)	32, 286, 956, 1539, 1760
HpyF10VI	GCNNNNNNNGC	5 cut(s)	173, 358, 542, 1536, 1606
HpyF3I	CTNAG	2 cut(s)	537, 2135
HpySE526I	ACGT	4 cut(s)	146, 1401, 1541, 1944
Hsp92I	GRCGYC	4 cut(s)	273, 809, 883, 1687
HspAI	GCGC	2 cut(s)	107, 809
KasI	GGCGCC	1 cut(s)	808
KpnI	GGTACC	1 cut(s)	1370
KroI	GCCGGC	2 cut(s)	1358, 1958
KroNI	GCCGGC	2 cut(s)	1360, 1960
Ksp22I	TGATCA	1 cut(s)	259
Kzo9I	GATC	7 cut(s)	259, 306, 695, 820, 1127, 1150, 1531
LguI	GCTCTTC	1 cut(s)	1053
LmnI	GCTCC	3 cut(s)	104, 542, 1114
Lsp1109I	GCAGC	4 cut(s)	97, 154, 1147, 1213
LweI	GCATC	1 cut(s)	202
MaeI	CTAG	9 cut(s)	347, 900, 923, 942, 1188, 1704, 1727, 1746, 2147
MaeII	ACGT	4 cut(s)	146, 1401, 1541, 1944
MaeIII	GTNAC	3 cut(s)	51, 288, 392
MalI	GATC	7 cut(s)	261, 308, 697, 822, 1129, 1152, 1533
MboI	GATC	7 cut(s)	259, 306, 695, 820, 1127, 1150, 1531
MhlI	GDGCHC	2 cut(s)	1329, 1602
MluCI	AATT	8 cut(s)	43, 553, 681, 699, 1258, 1286, 1340, 1445
Mly113I	GGCGCC	1 cut(s)	809
MlyI	GAGTC	3 cut(s)	634, 1025, 1431
MmeI	TCCRAC	3 cut(s)	593, 830, 1634
MroNI	GCCGGC	2 cut(s)	1358, 1958
MroXI	GAANNNNTTC	2 cut(s)	722, 1620
MseI	TTAA	2 cut(s)	803, 2072
MslI	CAYNNNNRTG	4 cut(s)	267, 1461, 1559, 2164
MspA1I	CMGCKG	2 cut(s)	1138, 1204
MspI	CCGG	7 cut(s)	478, 812, 1359, 1363, 1637, 1959, 2000
MspR9I	CCNGG	5 cut(s)	813, 846, 1364, 1476, 1650
Mva1269I	GAATGC	1 cut(s)	34
MvaI	CCWGG	3 cut(s)	846, 1476, 1650
MwoI	GCNNNNNNNGC	5 cut(s)	173, 358, 542, 1536, 1606
NaeI	GCCGGC	2 cut(s)	1360, 1960
NarI	GGCGCC	1 cut(s)	809
NciI	CCSGG	2 cut(s)	813, 1364
NcoI	CCATGG	2 cut(s)	1146, 1456
NdeII	GATC	7 cut(s)	259, 306, 695, 820, 1127, 1150, 1531
NgoMIV	GCCGGC	2 cut(s)	1358, 1958
NlaIV	GGNNCC	6 cut(s)	200, 810, 897, 1116, 1368, 1701
NmeAIII	GCCGAG	2 cut(s)	328, 529
NmuCI	GTSAC	1 cut(s)	288
NspI	RCATGY	2 cut(s)	319, 1358
NspV	TTCGAA	1 cut(s)	322
PaeI	GCATGC	1 cut(s)	1358
PagI	TCATGA	1 cut(s)	262
PceI	AGGCCT	1 cut(s)	207
PciSI	GCTCTTC	1 cut(s)	1053
PctI	GAATGC	1 cut(s)	34
PdiI	GCCGGC	2 cut(s)	1360, 1960
PdmI	GAANNNNTTC	2 cut(s)	722, 1620
PfeI	GAWTC	4 cut(s)	38, 367, 527, 1898
PflMI	CCANNNNNTGG	1 cut(s)	1131
PinAI	ACCGGT	1 cut(s)	477
PkrI	GCNGC	9 cut(s)	87, 169, 1066, 1137, 1200, 1203, 1243, 1246, 1397
PleI	GAGTC	3 cut(s)	634, 1024, 1430
PluTI	GGCGCC	1 cut(s)	812
PmaCI	CACGTG	1 cut(s)	1542
PmlI	CACGTG	1 cut(s)	1542
PpsI	GAGTC	3 cut(s)	634, 1024, 1430
Ppu21I	YACGTR	1 cut(s)	1542
Psp124BI	GAGCTC	1 cut(s)	1602
Psp1406I	AACGTT	2 cut(s)	146, 1401
Psp6I	CCWGG	3 cut(s)	844, 1474, 1648
PspCI	CACGTG	1 cut(s)	1542
PspFI	CCCAGC	1 cut(s)	1879
PspGI	CCWGG	3 cut(s)	844, 1474, 1648
PspN4I	GGNNCC	6 cut(s)	200, 810, 897, 1116, 1368, 1701
PspPI	GGNCC	4 cut(s)	737, 938, 1634, 1742
PsrI	GAACNNNNNNTAC	2 cut(s)	1896, 1928
PvuII	CAGCTG	1 cut(s)	1204
RsaI	GTAC	9 cut(s)	68, 389, 787, 1142, 1253, 1368, 1391, 1821, 1914
RsaNI	GTAC	9 cut(s)	67, 388, 786, 1141, 1252, 1367, 1390, 1820, 1913
RseI	CAYNNNNRTG	4 cut(s)	267, 1461, 1559, 2164
Rsr2I	CGGWCCG	1 cut(s)	1634
RsrII	CGGWCCG	1 cut(s)	1634
SacI	GAGCTC	1 cut(s)	1602
SapI	GCTCTTC	1 cut(s)	1053
SaqAI	TTAA	2 cut(s)	803, 2072
SatI	GCNGC	9 cut(s)	86, 168, 1065, 1136, 1199, 1202, 1242, 1245, 1396
Sau3AI	GATC	7 cut(s)	259, 306, 695, 820, 1127, 1150, 1531
Sau96I	GGNCC	4 cut(s)	737, 938, 1634, 1742
ScaI	AGTACT	1 cut(s)	1391
SchI	GAGTC	3 cut(s)	634, 1025, 1431
ScrFI	CCNGG	5 cut(s)	813, 846, 1364, 1476, 1650
SduI	GDGCHC	2 cut(s)	1329, 1602
SfaNI	GCATC	1 cut(s)	202
SfoI	GGCGCC	1 cut(s)	810
SfuI	TTCGAA	1 cut(s)	322
SinI	GGWCC	3 cut(s)	938, 1634, 1742
SmiMI	CAYNNNNRTG	4 cut(s)	267, 1461, 1559, 2164
SmlI	CTYRAG	1 cut(s)	2129
SmoI	CTYRAG	1 cut(s)	2129
SphI	GCATGC	1 cut(s)	1358
Sse9I	AATT	8 cut(s)	43, 553, 681, 699, 1258, 1286, 1340, 1445
SseBI	AGGCCT	1 cut(s)	207
SsiI	CCGC	9 cut(s)	83, 1064, 1138, 1198, 1241, 1244, 1302, 1396, 1930
SspDI	GGCGCC	1 cut(s)	808
SspMI	CTAG	9 cut(s)	347, 900, 923, 942, 1188, 1704, 1727, 1746, 2147
SstI	GAGCTC	1 cut(s)	1602
StuI	AGGCCT	1 cut(s)	207
StyD4I	CCNGG	5 cut(s)	811, 844, 1362, 1474, 1648
StyI	CCWWGG	6 cut(s)	171, 297, 899, 1146, 1456, 1703
TaaI	ACNGT	9 cut(s)	66, 392, 790, 867, 935, 1179, 1671, 1739, 1908
TaiI	ACGT	4 cut(s)	149, 1404, 1544, 1947
TasI	AATT	8 cut(s)	43, 553, 681, 699, 1258, 1286, 1340, 1445
TatI	WGTACW	1 cut(s)	1389
TauI	GCSGC	5 cut(s)	1067, 1201, 1244, 1247, 1398
TfiI	GAWTC	4 cut(s)	38, 367, 527, 1898
Tru1I	TTAA	2 cut(s)	803, 2072
Tru9I	TTAA	2 cut(s)	803, 2072
TscAI	CASTG	5 cut(s)	963, 1074, 1273, 1767, 1862
TseFI	GTSAC	1 cut(s)	288
TseI	GCWGC	4 cut(s)	85, 167, 1135, 1201
Tsp45I	GTSAC	1 cut(s)	288
TspDTI	ATGAA	7 cut(s)	279, 404, 680, 715, 1543, 1836, 1924
TspGWI	ACGGA	3 cut(s)	507, 1207, 1647
TspRI	CASTG	5 cut(s)	963, 1074, 1273, 1767, 1862
Van91I	CCANNNNNTGG	1 cut(s)	1131
VpaK11BI	GGWCC	3 cut(s)	938, 1634, 1742
XapI	RAATTY	2 cut(s)	43, 553
XbaI	TCTAGA	2 cut(s)	922, 1726
XceI	RCATGY	2 cut(s)	319, 1358
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1153
XmaJI	CCTAGG	2 cut(s)	899, 1703
XmnI	GAANNNNTTC	2 cut(s)	722, 1620
XspI	CTAG	9 cut(s)	347, 900, 923, 942, 1188, 1704, 1727, 1746, 2147
ZrmI	AGTACT	1 cut(s)	1391

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.