Rorug02G0501200
ERF Family

AP2 ERF and B3 domain-containing transcription

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0001939
Physical Location & Seq
Forward (+)
63350875 .. 63359254
8380 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0501200.1

Sequence Viewer

Length: 2703 bp
ATGATTATGTTGATTGCTGGTGGTGTAAATTTCAAATATAACTATTTCATAAAGAGAGAAGTATGGCCTTCATGTGACATTATTTGGAGACCTGGACCTGAATTCTCTTTGTCAGTACCCCGACCTGTCAACGGTGGAAAACTCGTGGTGAGGGACTCATGGATGAGGACTACGATGTCTCCTATTCATCCATGGGGCTCATTGATAGAAGAGACATATTTTCCAATACAACCTTTATTCTCAGCTCCAGATCCAGCTACAGATGAGGATGAGATTATGAAATACCTTAGAAGTGATATGTTAGAGTCACTGCCCGTCTTAAGTATTCCCATGGAGAAGGGAATGTTAGACTCTGATAGTGAACTTACAGCAAATTCTACACAGAAGGGCTTTATTTCTCATAGTGACATAATAGACCCATTGTTAAGTGATCTTAGGAAGGATAGTGCGTACTCTGATGGTGACCTTGCAGTGAATCCTAGTCAGAGGGTTTCAATTTCTAATAGCTTCTCAACAGAAAGATATCAACCTGTTGAGGAGCCCTGGTTAGTCGAACCACCTCCCTTCTTTCTTGTATCCAAGGATATGAGGGGGTCTGATATGTCAGACAATGGCAACATAGAAGATGGCATTACAAATTTGGATGATACAGGAAACTCTTTGCCTGAAGAAAGCAATAACCTAATTCCCAAGGAACCTGTTTCTACCATTATACTGATTAACTCTTCTATATGTACTATGCAAAGGATAGCTCTACTGGAATATGGGAAACTGGTTGAGCTACTATTGGAACCTGTTAAAAGTACTGTGCAGTGTGATAGCGTTTATCTAGGGGTGGTTACAAAACTTGTCCCCCATATGGGTGGGGCATTTGTAAATATAGGGAATTCTAGACCATCTCTAATGGACATCAAACACAACAGGGAGCCTTTTATATTCCCTCCATTCCGAAGGACAAAGAAAACGGAAGCCAACAGTCATATGTTCGAAGAACACATGACTGCAGATGAAAATGAACGCATGTCACTTGATTTCGAAGTGACTGATGACATCATGGAAATTAGCTCTCAGGACGATTTTGTAAAATCAATGCACAGTGACGATGAGGAGCATGAAATTGAGGATGCATTTGATCTCTCAGATGTTAAGGAACACATGAATGGTAGTATACTTGATTATGGCAAAGTAGAAGCTGATTATCCAGAAGGTGAAACTAGTGCCATTCCTGTTGCCATCAATGGTTCTAGCAATTCTCAAATGTCTCACCCCCAAAATAAGAAGAATGGTGCAAATACTGTCACTCATGAAAATAAGTGGGCCCGAGTTCAGAAGGGCACTAAAGTTGTTGTACAAGTTGTCAAAGAGGGGTTGGGTTCAAAAGGACCCACACTGACTGCTTATCCAAAATTAAAGAGCAGATTCTGGATATTGATAACTCGTTGTGATAGAATTGGAATCTCCAAGAAAATCAGTGGTATTGAGCGTACACGATTGAAAGTCATTGCAAAAACTTTGCAGCCTCCAGGTTTTGGTCTGACTGTAAGGACTGTTGCTGCTGGCCATTCTTTAGAGGAACTGCAAAAAGATCTGGAAGGTTTGGTTTTAACTTGGAAGAATATCACGGAGCATGCAAAATCTGCAGCTCTTGCTGCAGATGAAGGTGTGGAAGGAGCCGTTCCTGTTATTCTGCATCGTGCAATGGGTCAGACGCTCTCAGTTGTGCAGGATTATTTTAATGAGACGGTTGAGAAAATGGTAGTTGACTCTCCAAGGACATATCATGAGGTTACCAATTACCTTCAGGAGATTGCCCCTGATCTTTGTGATCGAGTTGAGCTATACAGTAAAAGAATCCCTCTTTTTGATGAATTCAACATTGAAGAAGAGATCAACAATATGCTCAGTAAAAGGGTTCCACTTGCTAATGGAGGTTCTCTAGTGATTGAGCAAACTGAGGCATTAGTATCTGTTGATGTGAATGGGGGTCATGGGATGTTTGGTCAAGGAACCTCACAGGAGAAAGCTATTCTGGAAGTCAACCTTGCAGCTGCCAAACAGATTGCAAGGGAGTTACGACTGAGAGATATTGGGGGCATAATTGTGGTAGATTTCATTGATATGGCCGATGAATCAAATAAGAGATTGGTCTACGAAGAAGCTAAGAAGGCTGTTGAGAGAGATAGATCGATGGTTAAAGTCTCTGAACTGTCTAGGCATGGACTCATGGAAATAACGAGAAAGAGAGTACGACCTAGTGTGACATTTATGATTAGTGAACCATGTACTTGTTGTCATGCCACTGGGAGAGTAGAAGCCTTAGAGACCTCGTTCTCCAAAATTGAACAAGAAATTTCTCGATTGCTGGCAATGATGGAACGGAAACCAGACCCAGAGAACCCAAAATCTTGGCCAAAGTTCATTCTGAGAGTTGACCATCACATGTGTGACTACTTAACTTCTGGGAAAAGGACAAGACTTGCATTATTGAGTAGTTCCCTCAAAGCTTGGATTCTACTAAAGGTGGCTAGAGGTTTCACTAGGGGTGCATTTGAGGTAAAACCATTTACAGATGAAAAGGCACACAAAGATCTGCAGCAAGTCACCATTTCAATGATTCGACCTACAGAAGCCAGAAGAACTAACAATCCTGGAAAAAGGGTGACCCTATTTCCAGTAAAGAAATGGAAGGGTGGTGGGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
AP2 B3

Protein Analysis

900

Amino Acids

100.93

Weight (kDa)

5.65

Isoelectric Point (pI)

46.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RNase_E_G PF10150 470 - 749 4.4e-86 Ribonuclease E/G family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 175
AccB7I CCANNNNNTGG 1 cut(s) 1529
AccI GTMKAC 2 cut(s) 1168, 2148
AclWI GGATC 1 cut(s) 245
AcoI YGGCCR 3 cut(s) 1558, 2121, 2408
AcsI RAATTY 7 cut(s) 28, 101, 373, 637, 886, 1868, 2349
AcuI CTGAAG 2 cut(s) 687, 1784
AfaI GTAC 8 cut(s) 117, 452, 736, 805, 1350, 1486, 2247, 2284
AfiI CCNNNNNNNGG 4 cut(s) 131, 859, 860, 1529
AflII CTTAAG 1 cut(s) 319
AflIII ACRYGT 1 cut(s) 2439
AgsI TTSAA 8 cut(s) 34, 495, 1377, 1495, 1873, 1880, 2342, 2610
AhlI ACTAGT 1 cut(s) 1214
AjnI CCWGG 4 cut(s) 91, 542, 1522, 2647
AleI CACNNNNGTG 1 cut(s) 2442
AloI GAACNNNNNNTCC 2 cut(s) 2629, 2661
Alw26I GTCTC 7 cut(s) 82, 183, 206, 1266, 1733, 2203, 2315
AlwI GGATC 1 cut(s) 245
AlwNI CAGNNNCTG 1 cut(s) 1422
Ama87I CYCGRG 1 cut(s) 1320
AoxI GGCC 5 cut(s) 65, 1317, 1558, 2121, 2408
ApaI GGGCCC 1 cut(s) 1321
ApeKI GCWGC 7 cut(s) 1516, 1553, 1640, 1649, 2045, 2048, 2593
ApoI RAATTY 7 cut(s) 28, 101, 373, 637, 886, 1868, 2349
AspS9I GGNCC 4 cut(s) 95, 1317, 1318, 1382
AsuHPI GGTGA 6 cut(s) 160, 473, 1220, 1256, 2593, 2671
AsuII TTCGAA 2 cut(s) 987, 1035
AvaI CYCGRG 1 cut(s) 1320
AvaII GGWCC 2 cut(s) 95, 1382
BaeGI GKGCMC 2 cut(s) 1321, 1337
BalI TGGCCA 2 cut(s) 1560, 2410
BanII GRGCYC 3 cut(s) 200, 543, 1321
BauI CACGAG 1 cut(s) 143
BbvI GCAGC 7 cut(s) 1528, 1540, 1636, 1652, 2035, 2057, 2605
BccI CCATC 7 cut(s) 452, 620, 904, 1241, 2182, 2365, 2442
BceAI ACGGC 1 cut(s) 1658
BciT130I CCWGG 4 cut(s) 93, 544, 1524, 2649
BciVI GTATCC 1 cut(s) 586
BcoDI GTCTC 7 cut(s) 82, 183, 206, 1266, 1733, 2203, 2315
BcuI ACTAGT 1 cut(s) 1214
BfmI CTRYAG 6 cut(s) 258, 1002, 1638, 1650, 2591, 2622
BfrI CTTAAG 1 cut(s) 319
BfuI GTATCC 1 cut(s) 586
BglII AGATCT 2 cut(s) 1585, 2587
BisI GCNGC 7 cut(s) 1517, 1554, 1641, 1650, 2046, 2049, 2594
BlsI GCNGC 7 cut(s) 1518, 1555, 1642, 1651, 2047, 2050, 2595
BmcAI AGTACT 1 cut(s) 805
Bme1390I CCNGG 4 cut(s) 93, 544, 1524, 2649
Bme18I GGWCC 2 cut(s) 95, 1382
BmeT110I CYCGRG 1 cut(s) 1320
BmgT120I GGNCC 4 cut(s) 95, 1317, 1318, 1382
BmiI GGNNCC 9 cut(s) 540, 696, 792, 927, 1319, 1384, 1672, 1914, 2008
BmrFI CCNGG 4 cut(s) 93, 544, 1524, 2649
BmrI ACTGGG 1 cut(s) 2310
BmsI GCATC 2 cut(s) 1114, 1699
BmuI ACTGGG 1 cut(s) 2310
BpmI CTGGAG 2 cut(s) 231, 1506
Bpu14I TTCGAA 2 cut(s) 987, 1035
Bsa29I ATCGAT 1 cut(s) 2186
BsaI GGTCTC 2 cut(s) 82, 2315
BsaJI CCNNGG 6 cut(s) 191, 330, 542, 579, 690, 1769
BsaXI ACNNNNNCTCC 4 cut(s) 163, 193, 530, 560
Bsc4I CCNNNNNNNGG 4 cut(s) 131, 859, 860, 1529
Bse1I ACTGG 4 cut(s) 762, 777, 2305, 2672
Bse3DI GCAATG 3 cut(s) 1500, 1704, 2373
BseBI CCWGG 4 cut(s) 93, 544, 1524, 2649
BseCI ATCGAT 1 cut(s) 2186
BseDI CCNNGG 6 cut(s) 191, 330, 542, 579, 690, 1769
BseGI GGATG 6 cut(s) 168, 187, 274, 649, 1129, 1998
BseLI CCNNNNNNNGG 4 cut(s) 131, 859, 860, 1529
BseMI GCAATG 3 cut(s) 1500, 1704, 2373
BseMII CTCAG 8 cut(s) 255, 1082, 1152, 1728, 1915, 1944, 2069, 2414
BseNI ACTGG 4 cut(s) 762, 777, 2305, 2672
BseRI GAGGAG 2 cut(s) 551, 1121
BseSI GKGCMC 2 cut(s) 1321, 1337
BseXI GCAGC 7 cut(s) 1528, 1540, 1636, 1652, 2035, 2057, 2605
BsgI GTGCAG 2 cut(s) 830, 1742
BshFI GGCC 5 cut(s) 67, 1319, 1560, 2123, 2410
BshVI ATCGAT 1 cut(s) 2186
BsiHKCI CYCGRG 1 cut(s) 1320
BslFI GGGAC 2 cut(s) 167, 836
BslI CCNNNNNNNGG 4 cut(s) 131, 859, 860, 1529
BsmAI GTCTC 7 cut(s) 82, 183, 206, 1266, 1733, 2203, 2315
BsmBI CGTCTC 1 cut(s) 1733
BsmFI GGGAC 2 cut(s) 167, 836
BsnI GGCC 5 cut(s) 67, 1319, 1560, 2123, 2410
Bso31I GGTCTC 2 cut(s) 82, 2315
BsoBI CYCGRG 1 cut(s) 1320
Bsp119I TTCGAA 2 cut(s) 987, 1035
Bsp120I GGGCCC 1 cut(s) 1317
Bsp1286I GDGCHC 4 cut(s) 200, 543, 1321, 1337
Bsp1407I TGTACA 1 cut(s) 1348
Bsp143I GATC 9 cut(s) 250, 430, 1132, 1585, 1816, 1825, 1887, 2183, 2587
Bsp19I CCATGG 2 cut(s) 191, 330
BspANI GGCC 5 cut(s) 67, 1319, 1560, 2123, 2410
BspCNI CTCAG 8 cut(s) 254, 1081, 1151, 1727, 1914, 1945, 2070, 2415
BspDI ATCGAT 1 cut(s) 2186
BspHI TCATGA 2 cut(s) 1303, 1780
BspLI GGNNCC 9 cut(s) 540, 696, 792, 927, 1319, 1384, 1672, 1914, 2008
BspMAI CTGCAG 4 cut(s) 1006, 1642, 1654, 2595
BspPI GGATC 1 cut(s) 245
BspT104I TTCGAA 2 cut(s) 987, 1035
BspTI CTTAAG 1 cut(s) 319
BspTNI GGTCTC 2 cut(s) 82, 2315
BsrDI GCAATG 3 cut(s) 1500, 1704, 2373
BsrGI TGTACA 1 cut(s) 1348
BsrI ACTGG 4 cut(s) 762, 777, 2305, 2672
BssECI CCNNGG 6 cut(s) 191, 330, 542, 579, 690, 1769
BssMI GATC 9 cut(s) 250, 430, 1132, 1585, 1816, 1825, 1887, 2183, 2587
BssNAI GTATAC 1 cut(s) 1169
BssSI CACGAG 1 cut(s) 143
BssT1I CCWWGG 5 cut(s) 191, 330, 579, 690, 1769
Bst1107I GTATAC 1 cut(s) 1169
Bst2BI CACGAG 1 cut(s) 143
Bst2UI CCWGG 4 cut(s) 93, 544, 1524, 2649
Bst6I CTCTTC 3 cut(s) 204, 730, 1878
BstAFI CTTAAG 1 cut(s) 319
BstAPI GCANNNNNTGC 2 cut(s) 1637, 1646
BstAUI TGTACA 1 cut(s) 1348
BstBI TTCGAA 2 cut(s) 987, 1035
BstC8I GCNNGC 3 cut(s) 1558, 1629, 2364
BstDSI CCRYGG 2 cut(s) 191, 330
BstEII GGTNACC 3 cut(s) 461, 1786, 2659
BstF5I GGATG 6 cut(s) 168, 187, 274, 649, 1129, 1998
BstKTI GATC 9 cut(s) 253, 433, 1135, 1588, 1819, 1828, 1890, 2186, 2590
BstMAI GTCTC 7 cut(s) 82, 183, 206, 1266, 1733, 2203, 2315
BstMBI GATC 9 cut(s) 250, 430, 1132, 1585, 1816, 1825, 1887, 2183, 2587
BstMWI GCNNNNNNNGC 4 cut(s) 1637, 1646, 1649, 2165
BstNI CCWGG 4 cut(s) 93, 544, 1524, 2649
BstNSI RCATGY 3 cut(s) 1024, 1631, 2443
BstPI GGTNACC 3 cut(s) 461, 1786, 2659
BstSCI CCNGG 4 cut(s) 91, 542, 1522, 2647
BstSFI CTRYAG 6 cut(s) 258, 1002, 1638, 1650, 2591, 2622
BstSLI GKGCMC 2 cut(s) 1321, 1337
BstV1I GCAGC 7 cut(s) 1528, 1540, 1636, 1652, 2035, 2057, 2605
BstX2I RGATCY 3 cut(s) 250, 1585, 2587
BstXI CCANNNNNNTGG 2 cut(s) 863, 2406
BstYI RGATCY 3 cut(s) 250, 1585, 2587
BstZ17I GTATAC 1 cut(s) 1169
Bsu15I ATCGAT 1 cut(s) 2186
BsuI GTATCC 1 cut(s) 586
BsuRI GGCC 5 cut(s) 67, 1319, 1560, 2123, 2410
BsuTUI ATCGAT 1 cut(s) 2186
BtgI CCRYGG 2 cut(s) 191, 330
BtsCI GGATG 6 cut(s) 168, 187, 274, 649, 1129, 1998
BtsI GCAGTG 3 cut(s) 308, 477, 818
BtsIMutI CAGTG 7 cut(s) 308, 477, 818, 1102, 1388, 1477, 2298
Cac8I GCNNGC 3 cut(s) 1558, 1629, 2364
CaiI CAGNNNCTG 1 cut(s) 1422
CciI TCATGA 2 cut(s) 1303, 1780
Cfr13I GGNCC 4 cut(s) 95, 1317, 1318, 1382
ClaI ATCGAT 1 cut(s) 2186
CseI GACGC 1 cut(s) 1717
Csp6I GTAC 8 cut(s) 116, 451, 735, 804, 1349, 1485, 2246, 2283
CviQI GTAC 8 cut(s) 116, 451, 735, 804, 1349, 1485, 2246, 2283
DpnI GATC 9 cut(s) 252, 432, 1134, 1587, 1818, 1827, 1889, 2185, 2589
DpnII GATC 9 cut(s) 250, 430, 1132, 1585, 1816, 1825, 1887, 2183, 2587
DrdI GACNNNNNNGTC 1 cut(s) 175
DseDI GACNNNNNNGTC 1 cut(s) 175
EaeI YGGCCR 3 cut(s) 1558, 2121, 2408
Eam1104I CTCTTC 3 cut(s) 204, 730, 1878
EarI CTCTTC 3 cut(s) 204, 730, 1878
Eco130I CCWWGG 5 cut(s) 191, 330, 579, 690, 1769
Eco24I GRGCYC 3 cut(s) 200, 543, 1321
Eco31I GGTCTC 2 cut(s) 82, 2315
Eco32I GATATC 1 cut(s) 524
Eco47I GGWCC 2 cut(s) 95, 1382
Eco57I CTGAAG 2 cut(s) 687, 1784
Eco88I CYCGRG 1 cut(s) 1320
Eco91I GGTNACC 3 cut(s) 461, 1786, 2659
EcoO109I RGGNCCY 1 cut(s) 1382
EcoO65I GGTNACC 3 cut(s) 461, 1786, 2659
EcoRI GAATTC 3 cut(s) 101, 886, 1868
EcoRII CCWGG 4 cut(s) 91, 542, 1522, 2647
EcoRV GATATC 1 cut(s) 524
EcoT14I CCWWGG 5 cut(s) 191, 330, 579, 690, 1769
EcoT22I ATGCAT 1 cut(s) 1129
EcoT38I GRGCYC 3 cut(s) 200, 543, 1321
ErhI CCWWGG 5 cut(s) 191, 330, 579, 690, 1769
Esp3I CGTCTC 1 cut(s) 1733
FalI AAGNNNNNCTT 2 cut(s) 2025, 2057
FaqI GGGAC 2 cut(s) 167, 836
FauNDI CATATG 2 cut(s) 858, 981
FblI GTMKAC 2 cut(s) 1168, 2148
Fnu4HI GCNGC 7 cut(s) 1517, 1554, 1641, 1650, 2046, 2049, 2594
FokI GGATG 6 cut(s) 174, 175, 281, 656, 1136, 2005
FriOI GRGCYC 3 cut(s) 200, 543, 1321
Fsp4HI GCNGC 7 cut(s) 1517, 1554, 1641, 1650, 2046, 2049, 2594
GluI GCNGC 7 cut(s) 1517, 1554, 1641, 1650, 2046, 2049, 2594
GsuI CTGGAG 2 cut(s) 231, 1506
HaeIII GGCC 5 cut(s) 67, 1319, 1560, 2123, 2410
HgaI GACGC 1 cut(s) 1717
HincII GTYRAC 4 cut(s) 130, 1762, 2038, 2431
HindII GTYRAC 4 cut(s) 130, 1762, 2038, 2431
HindIII AAGCTT 1 cut(s) 2502
HphI GGTGA 6 cut(s) 160, 473, 1220, 1256, 2593, 2671
Hpy166II GTNNAC 9 cut(s) 130, 362, 1169, 1487, 1762, 2038, 2149, 2276, 2431
Hpy8I GTNNAC 9 cut(s) 130, 362, 1169, 1487, 1762, 2038, 2149, 2276, 2431
HpyF10VI GCNNNNNNNGC 4 cut(s) 1637, 1646, 1649, 2165
Kzo9I GATC 9 cut(s) 250, 430, 1132, 1585, 1816, 1825, 1887, 2183, 2587
LmnI GCTCC 6 cut(s) 250, 538, 925, 1108, 1624, 1670
Lsp1109I GCAGC 7 cut(s) 1528, 1540, 1636, 1652, 2035, 2057, 2605
LweI GCATC 2 cut(s) 1114, 1699
MalI GATC 9 cut(s) 252, 432, 1134, 1587, 1818, 1827, 1889, 2185, 2589
MboI GATC 9 cut(s) 250, 430, 1132, 1585, 1816, 1825, 1887, 2183, 2587
MflI RGATCY 3 cut(s) 250, 1585, 2587
MhlI GDGCHC 4 cut(s) 200, 543, 1321, 1337
MlsI TGGCCA 2 cut(s) 1560, 2410
MluNI TGGCCA 2 cut(s) 1560, 2410
MlyI GAGTC 5 cut(s) 149, 314, 344, 1757, 2214
Mox20I TGGCCA 2 cut(s) 1560, 2410
Mph1103I ATGCAT 1 cut(s) 1129
MscI TGGCCA 2 cut(s) 1560, 2410
MslI CAYNNNNRTG 6 cut(s) 861, 1158, 2099, 2117, 2442, 2609
Msp20I TGGCCA 2 cut(s) 1560, 2410
MspA1I CMGCKG 1 cut(s) 2048
MspCI CTTAAG 1 cut(s) 319
MspR9I CCNGG 4 cut(s) 93, 544, 1524, 2649
MvaI CCWGG 4 cut(s) 93, 544, 1524, 2649
MwoI GCNNNNNNNGC 4 cut(s) 1637, 1646, 1649, 2165
NcoI CCATGG 2 cut(s) 191, 330
NdeI CATATG 2 cut(s) 858, 981
NdeII GATC 9 cut(s) 250, 430, 1132, 1585, 1816, 1825, 1887, 2183, 2587
NlaIV GGNNCC 9 cut(s) 540, 696, 792, 927, 1319, 1384, 1672, 1914, 2008
NsiI ATGCAT 1 cut(s) 1129
NspI RCATGY 3 cut(s) 1024, 1631, 2443
NspV TTCGAA 2 cut(s) 987, 1035
OliI CACNNNNGTG 1 cut(s) 2442
PaeI GCATGC 1 cut(s) 1631
PagI TCATGA 2 cut(s) 1303, 1780
PciI ACATGT 1 cut(s) 2439
PfeI GAWTC 7 cut(s) 475, 1419, 1455, 1851, 2129, 2509, 2614
PflMI CCANNNNNTGG 1 cut(s) 1529
PfoI TCCNGGA 1 cut(s) 2647
PkrI GCNGC 7 cut(s) 1518, 1555, 1642, 1651, 2047, 2050, 2595
PleI GAGTC 5 cut(s) 149, 313, 344, 1757, 2214
PpsI GAGTC 5 cut(s) 149, 313, 344, 1757, 2214
PpuMI RGGWCCY 1 cut(s) 1382
PscI ACATGT 1 cut(s) 2439
Psp5II RGGWCCY 1 cut(s) 1382
Psp6I CCWGG 4 cut(s) 91, 542, 1522, 2647
PspEI GGTNACC 3 cut(s) 461, 1786, 2659
PspGI CCWGG 4 cut(s) 91, 542, 1522, 2647
PspN4I GGNNCC 9 cut(s) 540, 696, 792, 927, 1319, 1384, 1672, 1914, 2008
PspOMI GGGCCC 1 cut(s) 1317
PspPI GGNCC 4 cut(s) 95, 1317, 1318, 1382
PspPPI RGGWCCY 1 cut(s) 1382
PstI CTGCAG 4 cut(s) 1006, 1642, 1654, 2595
PstNI CAGNNNCTG 1 cut(s) 1422
PsuI RGATCY 3 cut(s) 250, 1585, 2587
PvuII CAGCTG 1 cut(s) 2048
RsaI GTAC 8 cut(s) 117, 452, 736, 805, 1350, 1486, 2247, 2284
RsaNI GTAC 8 cut(s) 116, 451, 735, 804, 1349, 1485, 2246, 2283
RseI CAYNNNNRTG 6 cut(s) 861, 1158, 2099, 2117, 2442, 2609
SatI GCNGC 7 cut(s) 1517, 1554, 1641, 1650, 2046, 2049, 2594
Sau3AI GATC 9 cut(s) 250, 430, 1132, 1585, 1816, 1825, 1887, 2183, 2587
Sau96I GGNCC 4 cut(s) 95, 1317, 1318, 1382
ScaI AGTACT 1 cut(s) 805
SchI GAGTC 5 cut(s) 149, 314, 344, 1757, 2214
ScrFI CCNGG 4 cut(s) 93, 544, 1524, 2649
SduI GDGCHC 4 cut(s) 200, 543, 1321, 1337
SfaNI GCATC 2 cut(s) 1114, 1699
SfcI CTRYAG 6 cut(s) 258, 1002, 1638, 1650, 2591, 2622
SfuI TTCGAA 2 cut(s) 987, 1035
SinI GGWCC 2 cut(s) 95, 1382
SmiMI CAYNNNNRTG 6 cut(s) 861, 1158, 2099, 2117, 2442, 2609
SmlI CTYRAG 1 cut(s) 319
SmoI CTYRAG 1 cut(s) 319
SpeI ACTAGT 1 cut(s) 1214
SphI GCATGC 1 cut(s) 1631
StyD4I CCNGG 4 cut(s) 91, 542, 1522, 2647
StyI CCWWGG 5 cut(s) 191, 330, 579, 690, 1769
TaqI TCGA 7 cut(s) 552, 987, 1035, 1828, 2186, 2356, 2617
TatI WGTACW 4 cut(s) 734, 803, 1348, 2282
TfiI GAWTC 7 cut(s) 475, 1419, 1455, 1851, 2129, 2509, 2614
TscAI CASTG 7 cut(s) 315, 477, 818, 1102, 1395, 1477, 2305
TseI GCWGC 7 cut(s) 1516, 1553, 1640, 1649, 2045, 2048, 2593
TspGWI ACGGA 3 cut(s) 980, 1637, 2392
TspRI CASTG 7 cut(s) 315, 477, 818, 1102, 1395, 1477, 2305
Van91I CCANNNNNTGG 1 cut(s) 1529
Vha464I CTTAAG 1 cut(s) 319
VpaK11BI GGWCC 2 cut(s) 95, 1382
XapI RAATTY 7 cut(s) 28, 101, 373, 637, 886, 1868, 2349
XbaI TCTAGA 1 cut(s) 890
XceI RCATGY 3 cut(s) 1024, 1631, 2443
XcmI CCANNNNNNNNNTGG 1 cut(s) 2679
XmiI GTMKAC 2 cut(s) 1168, 2148
ZrmI AGTACT 1 cut(s) 805
Zsp2I ATGCAT 1 cut(s) 1129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.