Rh2BG642700

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Reverse (-)
86161337 .. 86162126
790 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG642700.1

Sequence Viewer

Length: 276 bp
ATGAGATTGTCAAAACCATATGCGGATGCACCCTATGTACTCCAGTCAAGTGTACTTCACATTAGTTGGCTTTTGGAGGCATGTTCAGGTTATATGCTTCATTTGCTTCCTGTTCCTTATTCCTGCATGTATTCAGTTCGTTTTACCCTTGTTGATACTTGTTGCAGCTGTAGCAGAGTTGCTCGACATGCAGCTGATGAGCTCACAGGCAGAGTGAAGGAAAGAGAAGGTGGTCTGATGGGATTCATCAGCCTGTGGAGGCTAAAGAATGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

91

Amino Acids

10.3

Weight (kDa)

8.69

Isoelectric Point (pI)

58.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 23
AfaI GTAC 2 cut(s) 39, 54
AluBI AGCT 3 cut(s) 168, 194, 202
AluI AGCT 3 cut(s) 168, 194, 202
Alw21I GWGCWC 1 cut(s) 204
ApeKI GCWGC 2 cut(s) 165, 191
BanII GRGCYC 1 cut(s) 204
Bbv12I GWGCWC 1 cut(s) 204
BbvI GCAGC 2 cut(s) 177, 203
BccI CCATC 1 cut(s) 232
BfmI CTRYAG 1 cut(s) 169
BisI GCNGC 2 cut(s) 166, 192
BlsI GCNGC 2 cut(s) 167, 193
BmsI GCATC 1 cut(s) 16
BpmI CTGGAG 1 cut(s) 26
Bse1I ACTGG 1 cut(s) 43
BseGI GGATG 1 cut(s) 31
BseNI ACTGG 1 cut(s) 43
BseXI GCAGC 2 cut(s) 177, 203
BsiHKAI GWGCWC 1 cut(s) 204
Bsp1286I GDGCHC 1 cut(s) 204
BspACI CCGC 1 cut(s) 23
BsrI ACTGG 1 cut(s) 43
BstF5I GGATG 1 cut(s) 31
BstMWI GCNNNNNNNGC 3 cut(s) 103, 171, 188
BstNSI RCATGY 3 cut(s) 84, 130, 191
BstSFI CTRYAG 1 cut(s) 169
BstV1I GCAGC 2 cut(s) 177, 203
BtsCI GGATG 1 cut(s) 31
Csp6I GTAC 2 cut(s) 38, 53
CviAII CATG 3 cut(s) 81, 127, 188
CviJI RGCY 6 cut(s) 70, 168, 194, 202, 252, 262
CviKI_1 RGCY 6 cut(s) 70, 168, 194, 202, 252, 262
CviQI GTAC 2 cut(s) 38, 53
Ecl136II GAGCTC 1 cut(s) 202
Eco24I GRGCYC 1 cut(s) 204
Eco53kI GAGCTC 1 cut(s) 202
EcoICRI GAGCTC 1 cut(s) 202
EcoT38I GRGCYC 1 cut(s) 204
FaeI CATG 3 cut(s) 84, 130, 191
FaiI YATR 8 cut(s) 19, 21, 36, 82, 93, 95, 128, 189
FatI CATG 3 cut(s) 80, 126, 187
FauNDI CATATG 1 cut(s) 19
Fnu4HI GCNGC 2 cut(s) 166, 192
FokI GGATG 1 cut(s) 38
FriOI GRGCYC 1 cut(s) 204
Fsp4HI GCNGC 2 cut(s) 166, 192
GluI GCNGC 2 cut(s) 166, 192
GsuI CTGGAG 1 cut(s) 26
Hin1II CATG 3 cut(s) 84, 130, 191
HinfI GANTC 1 cut(s) 243
Hpy166II GTNNAC 1 cut(s) 53
Hpy188I TCNGA 1 cut(s) 237
Hpy8I GTNNAC 1 cut(s) 53
HpyAV CCTTC 2 cut(s) 211, 221
HpyCH4V TGCA 4 cut(s) 29, 126, 165, 191
HpyF10VI GCNNNNNNNGC 3 cut(s) 103, 171, 188
Hsp92II CATG 3 cut(s) 84, 130, 191
LpnPI CCDG 6 cut(s) 56, 72, 123, 136, 192, 266
Lsp1109I GCAGC 2 cut(s) 177, 203
LweI GCATC 1 cut(s) 16
MhlI GDGCHC 1 cut(s) 204
MnlI CCTC 2 cut(s) 70, 252
MspA1I CMGCKG 2 cut(s) 168, 194
MwoI GCNNNNNNNGC 3 cut(s) 103, 171, 188
NdeI CATATG 1 cut(s) 19
NlaIII CATG 3 cut(s) 84, 130, 191
NspI RCATGY 3 cut(s) 84, 130, 191
PfeI GAWTC 1 cut(s) 243
PkrI GCNGC 2 cut(s) 167, 193
Psp124BI GAGCTC 1 cut(s) 204
PvuII CAGCTG 2 cut(s) 168, 194
RsaI GTAC 2 cut(s) 39, 54
RsaNI GTAC 2 cut(s) 38, 53
SacI GAGCTC 1 cut(s) 204
SatI GCNGC 2 cut(s) 166, 192
SduI GDGCHC 1 cut(s) 204
SetI ASST 5 cut(s) 91, 170, 196, 204, 232
SfaNI GCATC 1 cut(s) 16
SfcI CTRYAG 1 cut(s) 169
SsiI CCGC 1 cut(s) 23
SstI GAGCTC 1 cut(s) 204
TaqI TCGA 1 cut(s) 184
TatI WGTACW 2 cut(s) 37, 52
TfiI GAWTC 1 cut(s) 243
TseI GCWGC 2 cut(s) 165, 191
TspDTI ATGAA 2 cut(s) 89, 235
XceI RCATGY 3 cut(s) 84, 130, 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.