Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0001939

Physical Location & Seq

Genomic Coordinates Reverse (-)

31001680 .. 31004319

Gene Structure 2640 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0308700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGATCTCTTGAATTGTATAATATGTCTTTCTTTTGCTTGGATCACCATCCAATCCTTGTATTTCCTTGCCAGAAGAAGCAAAGCAATTCCAAGACCTAGGCTTCCACCAGGACCAAAGCCATTTCCATTGATTGGGAATCTGTTTGAGATCGGTGACAAACCCCATCTCTCCCTCACTAAGCTTTCCCAGCGCTATGGCCCCATAATGAGTTTGCAGCTAGGCCAATTAACCACAATCGTAGTTTCTTCAACGACTTTGGCCAAAGAAATCCTCCGAACCCATGACCAAGTGTTCTGCAACCGAACCCTCCCAGATGCAGTCCACGCCTGCAAACACAGCGAGTACAGCATGGCTTGGCTTCCCGTATCAACAAGATGGAGAAATCTTCGCACAATATGCAACTTGCAATTGTTTGCCCCCAAAGTTCTTGATGCTAACCAAGCCAAACGGCGGGTAAAGGTGCAAAAGCTCATAGATGATGTCAATGAAAGCATGAGGGCCGGTGAGGCAGTGGATATCGGAAGGGCTGCTTTCTCAACCACACTCAATCTGTTGTCACAGACTATCTTCTCTGTGGATTTAGCTGACCCGAGTAGCGAGACAGCTAGGGAGTTCAAGGAGACTGTTTGGGGTATGATGGAAGAGATAGGAAAACCAAACTTGGCGGATTATTTTCCTTTTCTTAGGAAGCTTGATCCGCAAGGCATAAGGCGGCGCTTGACCCGTTACTTCCAAATTACAGTAGACATGTTTGATCGAATGATCCATCAAAGGTTGGAATCAAGAAAACGGGATGGTTATATCTCAACCAATGATATGTTGGATACACTTCTGAATATCAATGAAGAGAAAATGGAGGATATGGACATGCCTGAAACTCAACATTTATTTCTGGATCTATTTGCTGCTGGTACGGACACAAGTTCAGCCACAATGGAATGGGCAATGGCTGAGCTACTACGCAACCCAGAAATCCTTTCGAAAGTTCAAGCAGAACTTGAGCAAGTGATTGGAAAAGGGAAACTAGTTGAGGAATCAGACATTGCACGACTCCCTTACTTACAAGCAATAATCAAAGAAACATTTCGGGTTCATCCAACAGTTCCATTTCTACTCCCCCGGAAAGCAGAAGCAAACATAGAGATTGGCGGGTATATAATCCCAAAGGGTGCACGAGTTCTAATCAATTTTTGGGCCATAGGCAGAGACCCCATCACTTGGGACAACCCAAACTTGTTTATGCCTGAGAGGTTCCTGGGATTAGACAACCAAATTGATGTTACGGGGAAAAACTTTGAGCTTATTCCATTTGGTGGTGGGAGGAGAATTTGTCCTGGACTTCCATTGGCAATAAGAATGTTGCACTTGATGTTGGGTTCATTAATTAACTGTTTTGATTGGGAGCTTGAAGATGGAGTTGTACCCGAGACTATGAACATGGAAGATAAGTTTGGCCTCACCTTACAAATGGCTCAGCCTCTGAGAGCTGTGCCCAAGAAGTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000724 GO:0000725 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006310 GO:0006323 GO:0006325 GO:0006333 GO:0006334 GO:0006338 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008283 GO:0009555 GO:0009888 GO:0009934 GO:0009987 GO:0010026 GO:0016043 GO:0022603 GO:0022607 GO:0030154 GO:0031497 GO:0031507 GO:0032501 GO:0032502 GO:0032991 GO:0033186 GO:0033554 GO:0034622 GO:0034641 GO:0034728 GO:0042393 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0045787 GO:0046483 GO:0048229 GO:0048366 GO:0048367 GO:0048509 GO:0048518 GO:0048522 GO:0048731 GO:0048827 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051276 GO:0051716 GO:0051726 GO:0065003 GO:0065004 GO:0065007 GO:0070828 GO:0071103 GO:0071704 GO:0071824 GO:0071840 GO:0090304 GO:0090558 GO:0099402 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CAF1A

Protein Analysis

502

Amino Acids

57.17

Weight (kDa)

7.09

Isoelectric Point (pI)

43.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	36 - 487	2.3e-105	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001939)

Species	Orthologous Gene IDs
prunus_persica	Prupe.1G092800_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0383451 RchiOBHm_Chr2g0125501 RchiOBHm_Chr2g0171631 RchiOBHm_Chr2g0171641 RchiOBHm_Chr5g0011851 RchiOBHm_Chr5g0025001 RchiOBHm_Chr6g0253951
rosa_laevigata	RLG00000010447 RLG00000022025 RLG00000033319
rosa_multiflora	Rmu_co8441523.1_g000001 Rmu_sc0000012.1_g000008 Rmu_sc0001552.1_g000047 Rmu_sc0003158.1_g000011 Rmu_sc0003314.1_g000040 Rmu_sc0004347.1_g000014 Rmu_sc0005457.1_g000012 Rmu_sc0005523.1_g000007 Rmu_sc0006806.1_g000031
rosa_roxburghii	Rroxscaffold_1G00003330 Rroxscaffold_1G00058450 Rroxscaffold_2G00080560 Rroxscaffold_3G00249960 Rroxscaffold_3G00250370 Rroxscaffold_5G00347440
rosa_rugosa	Rorug02G0501200 Rorug04G0073700 Rorug05G0106400 Rorug07G0308700
rosa_samantha	Rh1AG212100 Rh2AG406200 Rh2AG629800 Rh2BG224700 Rh2BG640400 Rh2BG642700 Rh2CG608800 Rh2CG608900 Rh2DG651300 Rh2DG657000 Rh4DG354700 Rh5BG072900 Rh5BG370300 Rh5CG214900 Rh6BG397100 Rh7CG378700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	3 cut(s)	134, 1221, 1316
AccI	GTMKAC	1 cut(s)	747
AciI	CCGC	5 cut(s)	454, 668, 701, 715, 1152
AclWI	GGATC	5 cut(s)	12, 50, 692, 760, 906
AcoI	YGGCCR	1 cut(s)	261
AcsI	RAATTY	1 cut(s)	1329
AfaI	GTAC	3 cut(s)	347, 916, 1425
AfeI	AGCGCT	1 cut(s)	194
AfiI	CCNNNNNNNGG	4 cut(s)	134, 453, 1221, 1316
AflIII	ACRYGT	1 cut(s)	750
AgsI	TTSAA	5 cut(s)	13, 252, 619, 992, 1412
AhlI	ACTAGT	1 cut(s)	1027
AjnI	CCWGG	3 cut(s)	109, 1257, 1336
AjuI	GAANNNNNNNTTGG	2 cut(s)	1437, 1469
Alw21I	GWGCWC	1 cut(s)	1177
Alw26I	GTCTC	4 cut(s)	596, 617, 1203, 1424
Alw44I	GTGCAC	1 cut(s)	1173
AlwI	GGATC	5 cut(s)	12, 50, 692, 760, 906
AlwNI	CAGNNNCTG	1 cut(s)	1483
Ama87I	CYCGRG	2 cut(s)	592, 1427
Aor51HI	AGCGCT	1 cut(s)	194
AoxI	GGCC	6 cut(s)	199, 223, 261, 501, 1197, 1456
ApaLI	GTGCAC	1 cut(s)	1173
ApeKI	GCWGC	3 cut(s)	217, 530, 908
ApoI	RAATTY	1 cut(s)	1329
AseI	ATTAAT	1 cut(s)	1385
Asp700I	GAANNNNTTC	1 cut(s)	1086
AspA2I	CCTAGG	1 cut(s)	98
AspLEI	GCGC	2 cut(s)	195, 720
AspS9I	GGNCC	4 cut(s)	113, 200, 501, 1197
AsuC2I	CCSGG	1 cut(s)	1123
AsuHPI	GGTGA	4 cut(s)	37, 167, 518, 1453
AsuII	TTCGAA	1 cut(s)	983
AvaI	CYCGRG	2 cut(s)	592, 1427
AvaII	GGWCC	1 cut(s)	113
AvrII	CCTAGG	1 cut(s)	98
BaeGI	GKGCMC	2 cut(s)	1177, 1497
BalI	TGGCCA	1 cut(s)	263
BauI	CACGAG	1 cut(s)	1176
Bbv12I	GWGCWC	1 cut(s)	1177
BbvI	GCAGC	3 cut(s)	229, 517, 895
BccI	CCATC	8 cut(s)	56, 174, 372, 634, 777, 791, 1223, 1409
BceAI	ACGGC	1 cut(s)	467
BciT130I	CCWGG	3 cut(s)	111, 1259, 1338
BciVI	GTATCC	1 cut(s)	820
BcnI	CCSGG	1 cut(s)	1123
BcoDI	GTCTC	4 cut(s)	596, 617, 1203, 1424
BcuI	ACTAGT	1 cut(s)	1027
BfaI	CTAG	4 cut(s)	99, 221, 609, 1028
BfoI	RGCGCY	2 cut(s)	196, 721
BfuI	GTATCC	1 cut(s)	820
BglI	GCCNNNNNGGC	1 cut(s)	509
BisI	GCNGC	4 cut(s)	218, 531, 716, 909
BlnI	CCTAGG	1 cut(s)	98
BlpI	GCTNAGC	2 cut(s)	954, 1476
BlsI	GCNGC	4 cut(s)	219, 532, 717, 910
Bme1390I	CCNGG	4 cut(s)	111, 1123, 1259, 1338
Bme18I	GGWCC	1 cut(s)	113
BmeT110I	CYCGRG	2 cut(s)	592, 1427
BmgT120I	GGNCC	4 cut(s)	113, 200, 501, 1197
BmiI	GGNNCC	2 cut(s)	202, 1256
BmrFI	CCNGG	4 cut(s)	111, 1123, 1259, 1338
BmsI	GCATC	2 cut(s)	307, 424
Bpu1102I	GCTNAGC	2 cut(s)	954, 1476
Bpu14I	TTCGAA	1 cut(s)	983
BpuEI	CTTGAG	1 cut(s)	1022
BpuMI	CCSGG	1 cut(s)	1123
BsaBI	GATNNNNATC	1 cut(s)	47
BsaI	GGTCTC	1 cut(s)	1203
BsaJI	CCNNGG	3 cut(s)	98, 1121, 1258
BsaXI	ACNNNNNCTCC	2 cut(s)	1318, 1348
Bsc4I	CCNNNNNNNGG	4 cut(s)	134, 453, 1221, 1316
Bse118I	RCCGGY	1 cut(s)	503
Bse3DI	GCAATG	2 cut(s)	954, 1044
Bse8I	GATNNNNATC	1 cut(s)	47
BseBI	CCWGG	3 cut(s)	111, 1259, 1338
BseDI	CCNNGG	3 cut(s)	98, 1121, 1258
BseGI	GGATG	3 cut(s)	48, 802, 1096
BseJI	GATNNNNATC	1 cut(s)	47
BseLI	CCNNNNNNNGG	4 cut(s)	134, 453, 1221, 1316
BseMI	GCAATG	2 cut(s)	954, 1044
BseMII	CTCAG	4 cut(s)	945, 1239, 1475, 1490
BseRI	GAGGAG	1 cut(s)	1339
BseSI	GKGCMC	2 cut(s)	1177, 1497
BseXI	GCAGC	3 cut(s)	229, 517, 895
BseYI	CCCAGC	1 cut(s)	189
BshFI	GGCC	6 cut(s)	201, 225, 263, 503, 1199, 1458
BsiHKAI	GWGCWC	1 cut(s)	1177
BsiHKCI	CYCGRG	2 cut(s)	592, 1427
BsiSI	CCGG	2 cut(s)	504, 1123
BslFI	GGGAC	1 cut(s)	1238
BslI	CCNNNNNNNGG	4 cut(s)	134, 453, 1221, 1316
BsmAI	GTCTC	4 cut(s)	596, 617, 1203, 1424
BsmFI	GGGAC	1 cut(s)	1238
BsnI	GGCC	6 cut(s)	201, 225, 263, 503, 1199, 1458
Bso31I	GGTCTC	1 cut(s)	1203
BsoBI	CYCGRG	2 cut(s)	592, 1427
Bsp119I	TTCGAA	1 cut(s)	983
Bsp1286I	GDGCHC	2 cut(s)	1177, 1497
Bsp143I	GATC	7 cut(s)	4, 42, 150, 697, 757, 765, 898
Bsp1720I	GCTNAGC	2 cut(s)	954, 1476
BspACI	CCGC	5 cut(s)	454, 668, 701, 715, 1152
BspANI	GGCC	6 cut(s)	201, 225, 263, 503, 1199, 1458
BspCNI	CTCAG	4 cut(s)	946, 1240, 1476, 1489
BspLI	GGNNCC	2 cut(s)	202, 1256
BspPI	GGATC	5 cut(s)	12, 50, 692, 760, 906
BspT104I	TTCGAA	1 cut(s)	983
BspTNI	GGTCTC	1 cut(s)	1203
BsrDI	GCAATG	2 cut(s)	954, 1044
BsrFI	RCCGGY	1 cut(s)	503
BssAI	RCCGGY	1 cut(s)	503
BssECI	CCNNGG	3 cut(s)	98, 1121, 1258
BssMI	GATC	7 cut(s)	4, 42, 150, 697, 757, 765, 898
BssSI	CACGAG	1 cut(s)	1176
BssT1I	CCWWGG	1 cut(s)	98
Bst2BI	CACGAG	1 cut(s)	1176
Bst2UI	CCWGG	3 cut(s)	111, 1259, 1338
Bst4CI	ACNGT	4 cut(s)	628, 745, 1105, 1394
Bst6I	CTCTTC	2 cut(s)	639, 843
BstAPI	GCANNNNNTGC	1 cut(s)	399
BstBI	TTCGAA	1 cut(s)	983
BstC8I	GCNNGC	1 cut(s)	331
BstDEI	CTNAG	6 cut(s)	180, 686, 954, 1248, 1476, 1484
BstF5I	GGATG	3 cut(s)	48, 802, 1096
BstH2I	RGCGCY	2 cut(s)	196, 721
BstHHI	GCGC	2 cut(s)	195, 720
BstKTI	GATC	7 cut(s)	7, 45, 153, 700, 760, 768, 901
BstMAI	GTCTC	4 cut(s)	596, 617, 1203, 1424
BstMBI	GATC	7 cut(s)	4, 42, 150, 697, 757, 765, 898
BstMWI	GCNNNNNNNGC	8 cut(s)	190, 326, 339, 348, 399, 443, 509, 700
BstNI	CCWGG	3 cut(s)	111, 1259, 1338
BstNSI	RCATGY	2 cut(s)	754, 874
BstSCI	CCNGG	4 cut(s)	109, 1121, 1257, 1336
BstSLI	GKGCMC	2 cut(s)	1177, 1497
BstV1I	GCAGC	3 cut(s)	229, 517, 895
BstX2I	RGATCY	2 cut(s)	4, 898
BstXI	CCANNNNNNTGG	1 cut(s)	197
BstYI	RGATCY	2 cut(s)	4, 898
BsuI	GTATCC	1 cut(s)	820
BsuRI	GGCC	6 cut(s)	201, 225, 263, 503, 1199, 1458
BtsCI	GGATG	3 cut(s)	48, 802, 1096
BtsI	GCAGTG	1 cut(s)	519
BtsIMutI	CAGTG	1 cut(s)	519
Cac8I	GCNNGC	1 cut(s)	331
CaiI	CAGNNNCTG	1 cut(s)	1483
CfoI	GCGC	2 cut(s)	195, 720
Cfr10I	RCCGGY	1 cut(s)	503
Cfr13I	GGNCC	4 cut(s)	113, 200, 501, 1197
Csp6I	GTAC	3 cut(s)	346, 915, 1424
CviAII	CATG	6 cut(s)	284, 352, 496, 751, 871, 1441
CviQI	GTAC	3 cut(s)	346, 915, 1424
DdeI	CTNAG	6 cut(s)	180, 686, 954, 1248, 1476, 1484
DpnI	GATC	7 cut(s)	6, 44, 152, 699, 759, 767, 900
DpnII	GATC	7 cut(s)	4, 42, 150, 697, 757, 765, 898
EaeI	YGGCCR	1 cut(s)	261
Eam1104I	CTCTTC	2 cut(s)	639, 843
EarI	CTCTTC	2 cut(s)	639, 843
EciI	GGCGGA	1 cut(s)	683
Eco130I	CCWWGG	1 cut(s)	98
Eco31I	GGTCTC	1 cut(s)	1203
Eco32I	GATATC	1 cut(s)	520
Eco47I	GGWCC	1 cut(s)	113
Eco47III	AGCGCT	1 cut(s)	194
Eco88I	CYCGRG	2 cut(s)	592, 1427
EcoRII	CCWGG	3 cut(s)	109, 1257, 1336
EcoRV	GATATC	1 cut(s)	520
EcoT14I	CCWWGG	1 cut(s)	98
ErhI	CCWWGG	1 cut(s)	98
FaeI	CATG	6 cut(s)	287, 355, 499, 754, 874, 1444
FalI	AAGNNNNNCTT	4 cut(s)	517, 549, 984, 1016
FaqI	GGGAC	1 cut(s)	1238
FatI	CATG	6 cut(s)	283, 351, 495, 750, 870, 1440
FauI	CCCGC	2 cut(s)	447, 1145
FblI	GTMKAC	1 cut(s)	747
Fnu4HI	GCNGC	4 cut(s)	218, 531, 716, 909
FokI	GGATG	3 cut(s)	35, 809, 1083
Fsp4HI	GCNGC	4 cut(s)	218, 531, 716, 909
FspBI	CTAG	4 cut(s)	99, 221, 609, 1028
GlaI	GCGC	2 cut(s)	194, 719
GluI	GCNGC	4 cut(s)	218, 531, 716, 909
GsaI	CCCAGC	1 cut(s)	193
HaeII	RGCGCY	2 cut(s)	196, 721
HaeIII	GGCC	6 cut(s)	201, 225, 263, 503, 1199, 1458
HapII	CCGG	2 cut(s)	504, 1123
HhaI	GCGC	2 cut(s)	195, 720
Hin1II	CATG	6 cut(s)	287, 355, 499, 754, 874, 1444
Hin6I	GCGC	2 cut(s)	193, 718
HinP1I	GCGC	2 cut(s)	193, 718
HindIII	AAGCTT	2 cut(s)	182, 692
HinfI	GANTC	4 cut(s)	139, 782, 1037, 1053
HpaII	CCGG	2 cut(s)	504, 1123
HphI	GGTGA	4 cut(s)	37, 167, 518, 1453
Hpy166II	GTNNAC	3 cut(s)	325, 748, 1175
Hpy188I	TCNGA	5 cut(s)	278, 524, 837, 1042, 1485
Hpy188III	TCNNGA	4 cut(s)	10, 431, 786, 896
Hpy8I	GTNNAC	3 cut(s)	325, 748, 1175
HpyAV	CCTTC	1 cut(s)	519
HpyCH4III	ACNGT	4 cut(s)	628, 745, 1105, 1394
HpyF10VI	GCNNNNNNNGC	8 cut(s)	190, 326, 339, 348, 399, 443, 509, 700
HpyF3I	CTNAG	6 cut(s)	180, 686, 954, 1248, 1476, 1484
Hsp92II	CATG	6 cut(s)	287, 355, 499, 754, 874, 1444
HspAI	GCGC	2 cut(s)	193, 718
Kzo9I	GATC	7 cut(s)	4, 42, 150, 697, 757, 765, 898
LmnI	GCTCC	1 cut(s)	1405
Lsp1109I	GCAGC	3 cut(s)	229, 517, 895
LweI	GCATC	2 cut(s)	307, 424
MaeI	CTAG	4 cut(s)	99, 221, 609, 1028
MaeIII	GTNAC	4 cut(s)	155, 558, 728, 1282
MalI	GATC	7 cut(s)	6, 44, 152, 699, 759, 767, 900
MboI	GATC	7 cut(s)	4, 42, 150, 697, 757, 765, 898
MboII	GAAGA	8 cut(s)	87, 240, 380, 562, 656, 860, 1424, 1457
MfeI	CAATTG	1 cut(s)	410
MflI	RGATCY	2 cut(s)	4, 898
MhlI	GDGCHC	2 cut(s)	1177, 1497
MlsI	TGGCCA	1 cut(s)	263
MluCI	AATT	9 cut(s)	13, 87, 227, 410, 738, 1189, 1275, 1329, 1386
MluNI	TGGCCA	1 cut(s)	263
MlyI	GAGTC	1 cut(s)	1047
MmeI	TCCRAC	3 cut(s)	759, 804, 1124
Mox20I	TGGCCA	1 cut(s)	263
MroXI	GAANNNNTTC	1 cut(s)	1086
MscI	TGGCCA	1 cut(s)	263
MseI	TTAA	3 cut(s)	230, 1385, 1389
Msp20I	TGGCCA	1 cut(s)	263
MspI	CCGG	2 cut(s)	504, 1123
MspR9I	CCNGG	4 cut(s)	111, 1123, 1259, 1338
MunI	CAATTG	1 cut(s)	410
MvaI	CCWGG	3 cut(s)	111, 1259, 1338
MwoI	GCNNNNNNNGC	8 cut(s)	190, 326, 339, 348, 399, 443, 509, 700
NciI	CCSGG	1 cut(s)	1123
NdeII	GATC	7 cut(s)	4, 42, 150, 697, 757, 765, 898
NlaIII	CATG	6 cut(s)	287, 355, 499, 754, 874, 1444
NlaIV	GGNNCC	2 cut(s)	202, 1256
NmuCI	GTSAC	2 cut(s)	155, 558
NspI	RCATGY	2 cut(s)	754, 874
NspV	TTCGAA	1 cut(s)	983
PacI	TTAATTAA	1 cut(s)	1389
PciI	ACATGT	1 cut(s)	750
PdmI	GAANNNNTTC	1 cut(s)	1086
PfeI	GAWTC	3 cut(s)	139, 782, 1037
PflMI	CCANNNNNTGG	3 cut(s)	134, 1221, 1316
PfoI	TCCNGGA	1 cut(s)	1336
PkrI	GCNGC	4 cut(s)	219, 532, 717, 910
PleI	GAGTC	1 cut(s)	1047
PpsI	GAGTC	1 cut(s)	1047
PscI	ACATGT	1 cut(s)	750
PshBI	ATTAAT	1 cut(s)	1385
Psp6I	CCWGG	3 cut(s)	109, 1257, 1336
PspFI	CCCAGC	1 cut(s)	189
PspGI	CCWGG	3 cut(s)	109, 1257, 1336
PspN4I	GGNNCC	2 cut(s)	202, 1256
PspPI	GGNCC	4 cut(s)	113, 200, 501, 1197
PstNI	CAGNNNCTG	1 cut(s)	1483
PsuI	RGATCY	2 cut(s)	4, 898
RsaI	GTAC	3 cut(s)	347, 916, 1425
RsaNI	GTAC	3 cut(s)	346, 915, 1424
SaqAI	TTAA	3 cut(s)	230, 1385, 1389
SatI	GCNGC	4 cut(s)	218, 531, 716, 909
Sau3AI	GATC	7 cut(s)	4, 42, 150, 697, 757, 765, 898
Sau96I	GGNCC	4 cut(s)	113, 200, 501, 1197
SchI	GAGTC	1 cut(s)	1047
ScrFI	CCNGG	4 cut(s)	111, 1123, 1259, 1338
SduI	GDGCHC	2 cut(s)	1177, 1497
SfaNI	GCATC	2 cut(s)	307, 424
SfuI	TTCGAA	1 cut(s)	983
SinI	GGWCC	1 cut(s)	113
SmlI	CTYRAG	1 cut(s)	1001
SmoI	CTYRAG	1 cut(s)	1001
SpeI	ACTAGT	1 cut(s)	1027
Sse9I	AATT	9 cut(s)	13, 87, 227, 410, 738, 1189, 1275, 1329, 1386
SsiI	CCGC	5 cut(s)	454, 668, 701, 715, 1152
SspMI	CTAG	4 cut(s)	99, 221, 609, 1028
StyD4I	CCNGG	4 cut(s)	109, 1121, 1257, 1336
StyI	CCWWGG	1 cut(s)	98
TaaI	ACNGT	4 cut(s)	628, 745, 1105, 1394
TaqI	TCGA	2 cut(s)	760, 983
TasI	AATT	9 cut(s)	13, 87, 227, 410, 738, 1189, 1275, 1329, 1386
TatI	WGTACW	1 cut(s)	345
TauI	GCSGC	1 cut(s)	718
TfiI	GAWTC	3 cut(s)	139, 782, 1037
Tru1I	TTAA	3 cut(s)	230, 1385, 1389
Tru9I	TTAA	3 cut(s)	230, 1385, 1389
TscAI	CASTG	1 cut(s)	519
TseFI	GTSAC	2 cut(s)	155, 558
TseI	GCWGC	3 cut(s)	217, 530, 908
Tsp45I	GTSAC	2 cut(s)	155, 558
TspDTI	ATGAA	5 cut(s)	504, 861, 1085, 1371, 1451
TspGWI	ACGGA	1 cut(s)	932
TspRI	CASTG	1 cut(s)	519
Van91I	CCANNNNNTGG	3 cut(s)	134, 1221, 1316
VneI	GTGCAC	1 cut(s)	1173
VpaK11BI	GGWCC	1 cut(s)	113
VspI	ATTAAT	1 cut(s)	1385
XapI	RAATTY	1 cut(s)	1329
XceI	RCATGY	2 cut(s)	754, 874
XcmI	CCANNNNNNNNNTGG	1 cut(s)	820
XmaJI	CCTAGG	1 cut(s)	98
XmiI	GTMKAC	1 cut(s)	747
XmnI	GAANNNNTTC	1 cut(s)	1086
XspI	CTAG	4 cut(s)	99, 221, 609, 1028

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.