MD17G1206900.v1.1

Pentatricopeptide repeat domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr17
OG0004863
Physical Location & Seq
Reverse (-)
24985481 .. 24988706
3226 bp
Loading structure...
UTR
Exon/CDS
Intron
MD17G1206900.v1.1.491

Sequence Viewer

Length: 1788 bp
ATGTGTGCTCATTTTGTCCGACCACTCCTCAGAAAACTTGAGCCTGTTACCTCTGCCCCATTTCACTTCTGTCCCAAGAATTATCATTACCTCTCCTTTAACTACTTTTTAAACTCCTGCTCTTCTCTTTCAAACCTCAAATGTATCCACGCTCTAATCTTCCAACATGGATCCAACCAAAGCCTCCTCCTCTCAACAAAGCTGGTTACTTTGGCATCTTCATTGGCCCCTACTATGGACTATGCACGAAAACTCTTTGATGCCACACCTGAAAGGGATGTATTTCTTTGGAACACCTTGATTAGGGGTTATGCTGATCAGGGTCCTTGCCATGAAGCCATAGTTTTGTACAGAAACATGCATCGCAGTGGGTTGTCACCTGATAACTACACTTTCCCTTTTGTGGTTCGGTCCTGTGCGGTGCAGTTGGCTTTGAGGGAAGGGAAAGAAGTGCATTGTAATGTAATTAAATATGGGTTTCATTCGGATGTGTTTGTTCAGAGCGCTTTGGTCAGTATGTATGCACAGAGTGGAGAAACTTTGGACTCAGAGATTGTTTTCAGCGAAATGGTTGTGAAGAACATAGTTTCTTGGACTGCAATGATAGCAGGGTATGTGCAAAATGGGTTTTATGAAGAAGGGTTGGGTGTTTTGCGAGACATGGTGGCTTCAGATACCCAACCAAATGTTGTAACGCTGGTCAGCGTCCTCCCTGCTTGTGCTAGTTTGGAATTTTTGGATTTAGGAAAATTGATTCATGGTTTTGGAATAAAAGTTGGTGTTGACAAAGATGTAGCACTCATGAATGCTTTGATTGCATGTTATGGCAAGTGTGGGAATCTTGACACTGCAAGATATTTATTTGATGGGATGGCAGTAAGAAATTTGGTCTCATGGAATGCAATGATCGCTGCGTATGAACAGAATAATTCAGGGACAGAGGCAATAGAACTCTTTCGCAGGATGCAAACTGAAAATGTCGAGTATGACTATATCACACTAGTCAGTGTTATTTCCGCCTGCACTAGCTTGGGTGCACTTAACACTGGGAGATGGTTGCATGAGCTCATTCGAATGAAAGGCTTTGGAACCAATGCTTCAATCACAAATGCACTCATTGACATGTATGCAAAGTGTGGCAACATAAACCTGGCCAAGGATGTATTTCAGGGGTTGCCTCATAAAAGCGTTGTGTCCTGGACATCTATAATAGGGGCTTGTGCTTCTCATGGTCACGGTGATGATGCTCTCAGGCTTTTCTCTATGATGATAGAACAGTGTGTCAAACCAAATAGTTTCACTTTCACTGCTGTTTTGACTGCGTGTAGGCATGTGGGTCTAGTAGAAGAAGGGAGAAAGCACTTTGAGAGCATGATCAAAGACTACTCAATTTGCCCTGGTTTAGAGCACTATGCTTGTATGGTTGATCTTCTGGGTCGAGCCGGCTGTTTGCTAGAGGCTTATAAGTTTATTGAGAGGATGCCTGTTGATCCAGATGTGGGTGTTTGGGGAGCTTTACTTAGTGCTTGCAGGATACATGGCAATGTTGAGCTCGCCGAGCTTGTGACAGCACATCTGTCCCATTTAGATACTCAAACAGTTACATCCTACGTTCTTATGTCAAACATATATGCCGAAGCCCGTAGATGGGAAGATGAAGCTAGGTTGAGAAACTTGATGCGAGAAAAGGAGTTGATGAAGTTACCTGGGCAAAGTTCTGTTGAGGTGAATCAACGATTTTATACATTTCTATCAGGTTCAAGATCCCGAGCATCTTGTCTGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

596

Amino Acids

66.27

Weight (kDa)

6.47

Isoelectric Point (pI)

45.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 92 - 140 1.3e-10 PPR repeat family
PPR_2 PF13041 193 - 241 5.7e-08 PPR repeat family
PPR PF01535 196 - 223 2.2e-06 PPR repeat
PPR_2 PF13041 295 - 341 1.1e-07 PPR repeat family
PPR PF01535 297 - 327 2.6e-06 PPR repeat
PPR_2 PF13041 396 - 442 2.3e-11 PPR repeat family
PPR PF01535 398 - 426 7e-06 PPR repeat
E_motif PF20431 513 - 575 9e-16 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1464
AciI CCGC 2 cut(s) 419, 1017
AclWI GGATC 4 cut(s) 165, 178, 1484, 1758
AcoI YGGCCR 1 cut(s) 1152
AcsI RAATTY 2 cut(s) 731, 883
AcuI CTGAAG 1 cut(s) 654
AdeI CACNNNGTG 1 cut(s) 530
AfaI GTAC 1 cut(s) 350
AfeI AGCGCT 1 cut(s) 505
AfiI CCNNNNNNNGG 7 cut(s) 235, 303, 403, 1156, 1499, 1647, 1648
AflIII ACRYGT 1 cut(s) 1122
AgsI TTSAA 3 cut(s) 132, 1101, 1761
AhlI ACTAGT 1 cut(s) 1000
AjnI CCWGG 4 cut(s) 1149, 1196, 1396, 1705
AluBI AGCT 7 cut(s) 202, 1029, 1066, 1514, 1552, 1561, 1661
AluI AGCT 7 cut(s) 202, 1029, 1066, 1514, 1552, 1561, 1661
Alw21I GWGCWC 5 cut(s) 10, 1039, 1068, 1410, 1554
Alw26I GTCTC 2 cut(s) 651, 895
Alw44I GTGCAC 1 cut(s) 1035
AlwI GGATC 4 cut(s) 165, 178, 1484, 1758
Ama87I CYCGRG 1 cut(s) 1767
Aor51HI AGCGCT 1 cut(s) 505
AoxI GGCC 2 cut(s) 225, 1152
ApaLI GTGCAC 1 cut(s) 1035
ApeKI GCWGC 1 cut(s) 911
ApoI RAATTY 2 cut(s) 731, 883
Asp700I GAANNNNTTC 1 cut(s) 954
AspLEI GCGC 1 cut(s) 506
AspS9I GGNCC 3 cut(s) 226, 323, 411
AsuHPI GGTGA 3 cut(s) 369, 1250, 1738
AsuII TTCGAA 1 cut(s) 1072
AvaI CYCGRG 1 cut(s) 1767
AvaII GGWCC 2 cut(s) 323, 411
BaeGI GKGCMC 1 cut(s) 1039
BalI TGGCCA 1 cut(s) 1154
BamHI GGATCC 1 cut(s) 170
BanII GRGCYC 2 cut(s) 1068, 1554
Bbv12I GWGCWC 5 cut(s) 10, 1039, 1068, 1410, 1554
BbvI GCAGC 1 cut(s) 898
BccI CCATC 4 cut(s) 860, 865, 1047, 1641
BciT130I CCWGG 4 cut(s) 1151, 1198, 1398, 1707
BciVI GTATCC 2 cut(s) 155, 1527
BclI TGATCA 2 cut(s) 316, 1374
BcoDI GTCTC 2 cut(s) 651, 895
BcuI ACTAGT 1 cut(s) 1000
BfaI CTAG 6 cut(s) 723, 1001, 1026, 1340, 1454, 1662
BfoI RGCGCY 1 cut(s) 507
BfuI GTATCC 2 cut(s) 155, 1527
BisI GCNGC 1 cut(s) 912
BlsI GCNGC 1 cut(s) 913
Bme1390I CCNGG 4 cut(s) 1151, 1198, 1398, 1707
Bme18I GGWCC 2 cut(s) 323, 411
BmeT110I CYCGRG 1 cut(s) 1767
BmgT120I GGNCC 3 cut(s) 226, 323, 411
BmiI GGNNCC 4 cut(s) 172, 228, 324, 1090
BmrFI CCNGG 4 cut(s) 1151, 1198, 1398, 1707
BmrI ACTGGG 1 cut(s) 1056
BmsI GCATC 8 cut(s) 224, 250, 370, 954, 1234, 1470, 1668, 1781
BmuI ACTGGG 1 cut(s) 1056
Bpu14I TTCGAA 1 cut(s) 1072
BpuEI CTTGAG 1 cut(s) 59
BsaI GGTCTC 1 cut(s) 895
BsaJI CCNNGG 3 cut(s) 1155, 1396, 1706
Bsc4I CCNNNNNNNGG 7 cut(s) 235, 303, 403, 1156, 1499, 1647, 1648
Bse118I RCCGGY 1 cut(s) 1442
Bse1I ACTGG 1 cut(s) 1051
Bse3DI GCAATG 3 cut(s) 606, 909, 1549
BseBI CCWGG 4 cut(s) 1151, 1198, 1398, 1707
BseDI CCNNGG 3 cut(s) 1155, 1396, 1706
BseGI GGATG 7 cut(s) 283, 493, 876, 969, 1165, 1485, 1604
BseLI CCNNNNNNNGG 7 cut(s) 235, 303, 403, 1156, 1499, 1647, 1648
BseMI GCAATG 3 cut(s) 606, 909, 1549
BseMII CTCAG 3 cut(s) 43, 561, 1264
BseNI ACTGG 1 cut(s) 1051
BseRI GAGGAG 3 cut(s) 17, 176, 179
BseSI GKGCMC 1 cut(s) 1039
BseXI GCAGC 1 cut(s) 898
BsgI GTGCAG 2 cut(s) 443, 1006
BshFI GGCC 2 cut(s) 227, 1154
BsiHKAI GWGCWC 5 cut(s) 10, 1039, 1068, 1410, 1554
BsiHKCI CYCGRG 1 cut(s) 1767
BsiSI CCGG 1 cut(s) 1443
BslFI GGGAC 3 cut(s) 57, 949, 1564
BslI CCNNNNNNNGG 7 cut(s) 235, 303, 403, 1156, 1499, 1647, 1648
BsmAI GTCTC 2 cut(s) 651, 895
BsmFI GGGAC 3 cut(s) 57, 949, 1564
BsmI GAATGC 2 cut(s) 811, 904
BsnI GGCC 2 cut(s) 227, 1154
Bso31I GGTCTC 1 cut(s) 895
BsoBI CYCGRG 1 cut(s) 1767
Bsp119I TTCGAA 1 cut(s) 1072
Bsp1286I GDGCHC 5 cut(s) 10, 1039, 1068, 1410, 1554
Bsp1407I TGTACA 1 cut(s) 348
Bsp143I GATC 7 cut(s) 170, 316, 906, 1374, 1426, 1489, 1763
BspACI CCGC 2 cut(s) 419, 1017
BspANI GGCC 2 cut(s) 227, 1154
BspCNI CTCAG 3 cut(s) 42, 560, 1263
BspHI TCATGA 1 cut(s) 801
BspLI GGNNCC 4 cut(s) 172, 228, 324, 1090
BspPI GGATC 4 cut(s) 165, 178, 1484, 1758
BspQI GCTCTTC 1 cut(s) 127
BspT104I TTCGAA 1 cut(s) 1072
BspTNI GGTCTC 1 cut(s) 895
BsrDI GCAATG 3 cut(s) 606, 909, 1549
BsrFI RCCGGY 1 cut(s) 1442
BsrGI TGTACA 1 cut(s) 348
BsrI ACTGG 1 cut(s) 1051
BssAI RCCGGY 1 cut(s) 1442
BssECI CCNNGG 3 cut(s) 1155, 1396, 1706
BssMI GATC 7 cut(s) 170, 316, 906, 1374, 1426, 1489, 1763
BssT1I CCWWGG 1 cut(s) 1155
Bst2UI CCWGG 4 cut(s) 1151, 1198, 1398, 1707
Bst4CI ACNGT 3 cut(s) 1238, 1278, 1600
Bst6I CTCTTC 1 cut(s) 127
BstAUI TGTACA 1 cut(s) 348
BstBI TTCGAA 1 cut(s) 1072
BstC8I GCNNGC 4 cut(s) 1021, 1444, 1528, 1554
BstDEI CTNAG 4 cut(s) 29, 547, 1250, 1520
BstENI CCTNNNNNAGG 2 cut(s) 301, 1154
BstF5I GGATG 7 cut(s) 283, 493, 876, 969, 1165, 1485, 1604
BstH2I RGCGCY 1 cut(s) 507
BstHHI GCGC 1 cut(s) 506
BstKTI GATC 7 cut(s) 173, 319, 909, 1377, 1429, 1492, 1766
BstMAI GTCTC 2 cut(s) 651, 895
BstMBI GATC 7 cut(s) 170, 316, 906, 1374, 1426, 1489, 1763
BstMWI GCNNNNNNNGC 4 cut(s) 605, 815, 908, 1558
BstNI CCWGG 4 cut(s) 1151, 1198, 1398, 1707
BstNSI RCATGY 4 cut(s) 361, 822, 1126, 1334
BstSCI CCNGG 4 cut(s) 1149, 1196, 1396, 1705
BstSLI GKGCMC 1 cut(s) 1039
BstV1I GCAGC 1 cut(s) 898
BstX2I RGATCY 2 cut(s) 170, 1763
BstYI RGATCY 2 cut(s) 170, 1763
BsuI GTATCC 2 cut(s) 155, 1527
BsuRI GGCC 2 cut(s) 227, 1154
BtgZI GCGATG 1 cut(s) 347
BtsCI GGATG 7 cut(s) 283, 493, 876, 969, 1165, 1485, 1604
BtsI GCAGTG 3 cut(s) 373, 846, 1305
BtsIMutI CAGTG 6 cut(s) 373, 846, 1012, 1044, 1283, 1305
Cac8I GCNNGC 4 cut(s) 1021, 1444, 1528, 1554
CciI TCATGA 1 cut(s) 801
CfoI GCGC 1 cut(s) 506
Cfr10I RCCGGY 1 cut(s) 1442
Cfr13I GGNCC 3 cut(s) 226, 323, 411
CseI GACGC 1 cut(s) 694
Csp6I GTAC 1 cut(s) 349
CviQI GTAC 1 cut(s) 349
DdeI CTNAG 4 cut(s) 29, 547, 1250, 1520
DpnI GATC 7 cut(s) 172, 318, 908, 1376, 1428, 1491, 1765
DpnII GATC 7 cut(s) 170, 316, 906, 1374, 1426, 1489, 1763
DraI TTTAAA 1 cut(s) 111
DraIII CACNNNGTG 1 cut(s) 530
EaeI YGGCCR 1 cut(s) 1152
Eam1104I CTCTTC 1 cut(s) 127
EarI CTCTTC 1 cut(s) 127
EciI GGCGGA 1 cut(s) 1006
Ecl136II GAGCTC 2 cut(s) 1066, 1552
Eco130I CCWWGG 1 cut(s) 1155
Eco24I GRGCYC 2 cut(s) 1068, 1554
Eco31I GGTCTC 1 cut(s) 895
Eco47I GGWCC 2 cut(s) 323, 411
Eco47III AGCGCT 1 cut(s) 505
Eco53kI GAGCTC 2 cut(s) 1066, 1552
Eco57I CTGAAG 1 cut(s) 654
Eco88I CYCGRG 1 cut(s) 1767
EcoICRI GAGCTC 2 cut(s) 1066, 1552
EcoNI CCTNNNNNAGG 2 cut(s) 301, 1154
EcoO109I RGGNCCY 1 cut(s) 323
EcoRII CCWGG 4 cut(s) 1149, 1196, 1396, 1705
EcoT14I CCWWGG 1 cut(s) 1155
EcoT22I ATGCAT 1 cut(s) 363
EcoT38I GRGCYC 2 cut(s) 1068, 1554
ErhI CCWWGG 1 cut(s) 1155
FaqI GGGAC 3 cut(s) 57, 949, 1564
FbaI TGATCA 2 cut(s) 316, 1374
Fnu4HI GCNGC 1 cut(s) 912
FokI GGATG 7 cut(s) 290, 500, 883, 976, 1172, 1492, 1591
FriOI GRGCYC 2 cut(s) 1068, 1554
Fsp4HI GCNGC 1 cut(s) 912
FspBI CTAG 6 cut(s) 723, 1001, 1026, 1340, 1454, 1662
GlaI GCGC 1 cut(s) 505
GluI GCNGC 1 cut(s) 912
HaeII RGCGCY 1 cut(s) 507
HaeIII GGCC 2 cut(s) 227, 1154
HapII CCGG 1 cut(s) 1443
HgaI GACGC 1 cut(s) 694
HhaI GCGC 1 cut(s) 506
Hin6I GCGC 1 cut(s) 504
HinP1I GCGC 1 cut(s) 504
HincII GTYRAC 1 cut(s) 784
HindII GTYRAC 1 cut(s) 784
HinfI GANTC 4 cut(s) 545, 754, 838, 1729
HpaII CCGG 1 cut(s) 1443
HphI GGTGA 3 cut(s) 369, 1250, 1738
Hpy166II GTNNAC 2 cut(s) 784, 1037
Hpy188I TCNGA 7 cut(s) 20, 32, 487, 501, 550, 673, 1782
Hpy188III TCNNGA 5 cut(s) 802, 842, 1493, 1761, 1767
Hpy8I GTNNAC 2 cut(s) 784, 1037
HpyAV CCTTC 3 cut(s) 434, 632, 1343
HpyCH4III ACNGT 3 cut(s) 1238, 1278, 1600
HpyCH4IV ACGT 1 cut(s) 1611
HpyF10VI GCNNNNNNNGC 4 cut(s) 605, 815, 908, 1558
HpyF3I CTNAG 4 cut(s) 29, 547, 1250, 1520
HpySE526I ACGT 1 cut(s) 1611
HspAI GCGC 1 cut(s) 504
KroI GCCGGC 1 cut(s) 1442
KroNI GCCGGC 1 cut(s) 1444
Ksp22I TGATCA 2 cut(s) 316, 1374
Kzo9I GATC 7 cut(s) 170, 316, 906, 1374, 1426, 1489, 1763
LguI GCTCTTC 1 cut(s) 127
LmnI GCTCC 1 cut(s) 1511
Lsp1109I GCAGC 1 cut(s) 898
LweI GCATC 8 cut(s) 224, 250, 370, 954, 1234, 1470, 1668, 1781
MaeI CTAG 6 cut(s) 723, 1001, 1026, 1340, 1454, 1662
MaeII ACGT 1 cut(s) 1611
MaeIII GTNAC 8 cut(s) 46, 205, 375, 691, 1232, 1564, 1600, 1701
MalI GATC 7 cut(s) 172, 318, 908, 1376, 1428, 1491, 1765
MboI GATC 7 cut(s) 170, 316, 906, 1374, 1426, 1489, 1763
MboII GAAGA 8 cut(s) 114, 151, 210, 589, 647, 1358, 1421, 1664
MflI RGATCY 2 cut(s) 170, 1763
MhlI GDGCHC 5 cut(s) 10, 1039, 1068, 1410, 1554
MlsI TGGCCA 1 cut(s) 1154
MluCI AATT 8 cut(s) 79, 465, 731, 749, 883, 928, 1389, 1783
MluNI TGGCCA 1 cut(s) 1154
MlyI GAGTC 1 cut(s) 539
MmeI TCCRAC 3 cut(s) 43, 187, 198
Mox20I TGGCCA 1 cut(s) 1154
Mph1103I ATGCAT 1 cut(s) 363
MroNI GCCGGC 1 cut(s) 1442
MroXI GAANNNNTTC 1 cut(s) 954
MscI TGGCCA 1 cut(s) 1154
MseI TTAA 5 cut(s) 99, 110, 468, 1041, 1786
MslI CAYNNNNRTG 7 cut(s) 366, 459, 486, 1073, 1121, 1239, 1542
Msp20I TGGCCA 1 cut(s) 1154
MspI CCGG 1 cut(s) 1443
MspR9I CCNGG 4 cut(s) 1151, 1198, 1398, 1707
Mva1269I GAATGC 2 cut(s) 811, 904
MvaI CCWGG 4 cut(s) 1151, 1198, 1398, 1707
MwoI GCNNNNNNNGC 4 cut(s) 605, 815, 908, 1558
NaeI GCCGGC 1 cut(s) 1444
NdeII GATC 7 cut(s) 170, 316, 906, 1374, 1426, 1489, 1763
NgoMIV GCCGGC 1 cut(s) 1442
NlaIV GGNNCC 4 cut(s) 172, 228, 324, 1090
NmeAIII GCCGAG 1 cut(s) 1582
NmuCI GTSAC 3 cut(s) 375, 1232, 1564
NsiI ATGCAT 1 cut(s) 363
NspI RCATGY 4 cut(s) 361, 822, 1126, 1334
NspV TTCGAA 1 cut(s) 1072
PagI TCATGA 1 cut(s) 801
PciI ACATGT 1 cut(s) 1122
PciSI GCTCTTC 1 cut(s) 127
PctI GAATGC 2 cut(s) 811, 904
PdiI GCCGGC 1 cut(s) 1444
PdmI GAANNNNTTC 1 cut(s) 954
PfeI GAWTC 3 cut(s) 754, 838, 1729
PfoI TCCNGGA 1 cut(s) 1196
PkrI GCNGC 1 cut(s) 913
PleI GAGTC 1 cut(s) 539
PpsI GAGTC 1 cut(s) 539
PpuMI RGGWCCY 1 cut(s) 323
PscI ACATGT 1 cut(s) 1122
PsiI TTATAA 1 cut(s) 1464
Psp124BI GAGCTC 2 cut(s) 1068, 1554
Psp5II RGGWCCY 1 cut(s) 323
Psp6I CCWGG 4 cut(s) 1149, 1196, 1396, 1705
PspGI CCWGG 4 cut(s) 1149, 1196, 1396, 1705
PspN4I GGNNCC 4 cut(s) 172, 228, 324, 1090
PspPI GGNCC 3 cut(s) 226, 323, 411
PspPPI RGGWCCY 1 cut(s) 323
PsuI RGATCY 2 cut(s) 170, 1763
RsaI GTAC 1 cut(s) 350
RsaNI GTAC 1 cut(s) 349
RseI CAYNNNNRTG 7 cut(s) 366, 459, 486, 1073, 1121, 1239, 1542
SacI GAGCTC 2 cut(s) 1068, 1554
SapI GCTCTTC 1 cut(s) 127
SaqAI TTAA 5 cut(s) 99, 110, 468, 1041, 1786
SatI GCNGC 1 cut(s) 912
Sau3AI GATC 7 cut(s) 170, 316, 906, 1374, 1426, 1489, 1763
Sau96I GGNCC 3 cut(s) 226, 323, 411
SchI GAGTC 1 cut(s) 539
ScrFI CCNGG 4 cut(s) 1151, 1198, 1398, 1707
SduI GDGCHC 5 cut(s) 10, 1039, 1068, 1410, 1554
SfaNI GCATC 8 cut(s) 224, 250, 370, 954, 1234, 1470, 1668, 1781
SfuI TTCGAA 1 cut(s) 1072
SinI GGWCC 2 cut(s) 323, 411
SmiMI CAYNNNNRTG 7 cut(s) 366, 459, 486, 1073, 1121, 1239, 1542
SmlI CTYRAG 1 cut(s) 38
SmoI CTYRAG 1 cut(s) 38
SpeI ACTAGT 1 cut(s) 1000
Sse9I AATT 8 cut(s) 79, 465, 731, 749, 883, 928, 1389, 1783
SsiI CCGC 2 cut(s) 419, 1017
SspMI CTAG 6 cut(s) 723, 1001, 1026, 1340, 1454, 1662
SstI GAGCTC 2 cut(s) 1068, 1554
StyD4I CCNGG 4 cut(s) 1149, 1196, 1396, 1705
StyI CCWWGG 1 cut(s) 1155
TaaI ACNGT 3 cut(s) 1238, 1278, 1600
TaiI ACGT 1 cut(s) 1614
TaqI TCGA 3 cut(s) 981, 1072, 1438
TaqII GACCGA 1 cut(s) 399
TasI AATT 8 cut(s) 79, 465, 731, 749, 883, 928, 1389, 1783
TatI WGTACW 1 cut(s) 348
TfiI GAWTC 3 cut(s) 754, 838, 1729
Tru1I TTAA 5 cut(s) 99, 110, 468, 1041, 1786
Tru9I TTAA 5 cut(s) 99, 110, 468, 1041, 1786
TscAI CASTG 6 cut(s) 373, 853, 1012, 1051, 1283, 1312
TseFI GTSAC 3 cut(s) 375, 1232, 1564
TseI GCWGC 1 cut(s) 911
Tsp45I GTSAC 3 cut(s) 375, 1232, 1564
TspRI CASTG 6 cut(s) 373, 853, 1012, 1051, 1283, 1312
VneI GTGCAC 1 cut(s) 1035
VpaK11BI GGWCC 2 cut(s) 323, 411
XagI CCTNNNNNAGG 2 cut(s) 301, 1154
XapI RAATTY 2 cut(s) 731, 883
XceI RCATGY 4 cut(s) 361, 822, 1126, 1334
XmnI GAANNNNTTC 1 cut(s) 954
XspI CTAG 6 cut(s) 723, 1001, 1026, 1340, 1454, 1662
Zsp2I ATGCAT 1 cut(s) 363
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.