Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g30210 |
| malus_domestica | MD17G1206900.v1.1 |
| prunus_persica | Prupe.3G081600_v2.0.a1 Prupe.3G081600_v2.0.a1 Prupe.3G081600_v2.0.a1 Prupe.3G081600_v2.0.a1 Prupe.3G081600_v2.0.a1 Prupe.3G081600_v2.0.a1 |
| pyrus_communis | pycom17g20970 |
| rosa_chinensis | RchiOBHm_Chr2g0136451 RchiOBHm_Chr5g0054651 RchiOBHm_Chr5g0054891 |
| rosa_laevigata | RLG00000034942 |
| rosa_multiflora | Rmu_sc0001998.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00025820 Rroxscaffold_1G00025830 Rroxscaffold_1G00026010 Rroxscaffold_1G00026310 Rroxscaffold_1G00026320 Rroxscaffold_2G00108280 |
| rosa_rugosa | Rorug02G0330400 Rorug02G0330500 Rorug05G0287600 |
| rosa_samantha | Rh2AG381500 Rh2AG381600 Rh2BG388200 Rh2BG388300 Rh2CG367800 Rh2CG367900 Rh2DG404600 Rh2DG404700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 131 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 19, 193, 261 |
| AgsI | TTSAA | 1 cut(s) | 58 |
| AluBI | AGCT | 1 cut(s) | 160 |
| AluI | AGCT | 1 cut(s) | 160 |
| AoxI | GGCC | 1 cut(s) | 183 |
| AspS9I | GGNCC | 1 cut(s) | 184 |
| AsuHPI | GGTGA | 1 cut(s) | 34 |
| BclI | TGATCA | 1 cut(s) | 258 |
| BmgT120I | GGNCC | 1 cut(s) | 184 |
| BmiI | GGNNCC | 3 cut(s) | 186, 209, 282 |
| BmrI | ACTGGG | 2 cut(s) | 29, 135 |
| BmsI | GCATC | 2 cut(s) | 111, 208 |
| BmuI | ACTGGG | 2 cut(s) | 29, 135 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 62, 94 |
| BpuEI | CTTGAG | 1 cut(s) | 17 |
| BsaJI | CCNNGG | 1 cut(s) | 192 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 19, 193, 261 |
| Bse1I | ACTGG | 2 cut(s) | 24, 130 |
| BseDI | CCNNGG | 1 cut(s) | 192 |
| BseGI | GGATG | 1 cut(s) | 102 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 19, 193, 261 |
| BseNI | ACTGG | 2 cut(s) | 24, 130 |
| BshFI | GGCC | 1 cut(s) | 185 |
| BslFI | GGGAC | 1 cut(s) | 37 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 19, 193, 261 |
| BsmFI | GGGAC | 1 cut(s) | 37 |
| BsnI | GGCC | 1 cut(s) | 185 |
| Bsp143I | GATC | 2 cut(s) | 258, 274 |
| Bsp19I | CCATGG | 1 cut(s) | 192 |
| BspANI | GGCC | 1 cut(s) | 185 |
| BspLI | GGNNCC | 3 cut(s) | 186, 209, 282 |
| BspQI | GCTCTTC | 1 cut(s) | 85 |
| BsrI | ACTGG | 2 cut(s) | 24, 130 |
| BssECI | CCNNGG | 1 cut(s) | 192 |
| BssMI | GATC | 2 cut(s) | 258, 274 |
| BssT1I | CCWWGG | 1 cut(s) | 192 |
| Bst6I | CTCTTC | 1 cut(s) | 85 |
| BstDSI | CCRYGG | 1 cut(s) | 192 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 259 |
| BstF5I | GGATG | 1 cut(s) | 102 |
| BstKTI | GATC | 2 cut(s) | 261, 277 |
| BstMBI | GATC | 2 cut(s) | 258, 274 |
| BsuRI | GGCC | 1 cut(s) | 185 |
| BtgI | CCRYGG | 1 cut(s) | 192 |
| BtsCI | GGATG | 1 cut(s) | 102 |
| BtsIMutI | CAGTG | 1 cut(s) | 17 |
| Cfr13I | GGNCC | 1 cut(s) | 184 |
| Csp6I | GTAC | 1 cut(s) | 130 |
| CviAII | CATG | 3 cut(s) | 107, 193, 223 |
| CviJI | RGCY | 4 cut(s) | 160, 185, 210, 295 |
| CviKI_1 | RGCY | 4 cut(s) | 160, 185, 210, 295 |
| CviQI | GTAC | 1 cut(s) | 130 |
| DpnI | GATC | 2 cut(s) | 260, 276 |
| DpnII | GATC | 2 cut(s) | 258, 274 |
| Eam1104I | CTCTTC | 1 cut(s) | 85 |
| EarI | CTCTTC | 1 cut(s) | 85 |
| Eco130I | CCWWGG | 1 cut(s) | 192 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 259 |
| EcoT14I | CCWWGG | 1 cut(s) | 192 |
| EcoT22I | ATGCAT | 1 cut(s) | 104 |
| ErhI | CCWWGG | 1 cut(s) | 192 |
| FaeI | CATG | 3 cut(s) | 110, 196, 226 |
| FaiI | YATR | 7 cut(s) | 108, 182, 194, 201, 224, 270, 298 |
| FaqI | GGGAC | 1 cut(s) | 37 |
| FatI | CATG | 3 cut(s) | 106, 192, 222 |
| FbaI | TGATCA | 1 cut(s) | 258 |
| FokI | GGATG | 1 cut(s) | 89 |
| HaeIII | GGCC | 1 cut(s) | 185 |
| Hin1II | CATG | 3 cut(s) | 110, 196, 226 |
| HindIII | AAGCTT | 1 cut(s) | 158 |
| HinfI | GANTC | 1 cut(s) | 71 |
| HphI | GGTGA | 1 cut(s) | 34 |
| Hpy188I | TCNGA | 2 cut(s) | 91, 291 |
| Hpy188III | TCNNGA | 1 cut(s) | 278 |
| HpyCH4V | TGCA | 2 cut(s) | 102, 203 |
| Hsp92II | CATG | 3 cut(s) | 110, 196, 226 |
| Ksp22I | TGATCA | 1 cut(s) | 258 |
| Kzo9I | GATC | 2 cut(s) | 258, 274 |
| LguI | GCTCTTC | 1 cut(s) | 85 |
| LmnI | GCTCC | 1 cut(s) | 207 |
| LpnPI | CCDG | 5 cut(s) | 5, 111, 224, 240, 247 |
| LweI | GCATC | 2 cut(s) | 111, 208 |
| MaeIII | GTNAC | 2 cut(s) | 151, 163 |
| MalI | GATC | 2 cut(s) | 260, 276 |
| MboI | GATC | 2 cut(s) | 258, 274 |
| MboII | GAAGA | 2 cut(s) | 72, 168 |
| MlyI | GAGTC | 1 cut(s) | 80 |
| MnlI | CCTC | 3 cut(s) | 55, 59, 152 |
| Mph1103I | ATGCAT | 1 cut(s) | 104 |
| MseI | TTAA | 1 cut(s) | 96 |
| NcoI | CCATGG | 1 cut(s) | 192 |
| NdeII | GATC | 2 cut(s) | 258, 274 |
| NlaIII | CATG | 3 cut(s) | 110, 196, 226 |
| NlaIV | GGNNCC | 3 cut(s) | 186, 209, 282 |
| NsiI | ATGCAT | 1 cut(s) | 104 |
| PciSI | GCTCTTC | 1 cut(s) | 85 |
| PleI | GAGTC | 1 cut(s) | 79 |
| PpsI | GAGTC | 1 cut(s) | 79 |
| PspN4I | GGNNCC | 3 cut(s) | 186, 209, 282 |
| PspPI | GGNCC | 1 cut(s) | 184 |
| RsaI | GTAC | 1 cut(s) | 131 |
| RsaNI | GTAC | 1 cut(s) | 130 |
| SapI | GCTCTTC | 1 cut(s) | 85 |
| SaqAI | TTAA | 1 cut(s) | 96 |
| Sau3AI | GATC | 2 cut(s) | 258, 274 |
| Sau96I | GGNCC | 1 cut(s) | 184 |
| SchI | GAGTC | 1 cut(s) | 80 |
| SetI | ASST | 6 cut(s) | 47, 96, 144, 162, 257, 286 |
| SfaNI | GCATC | 2 cut(s) | 111, 208 |
| SmlI | CTYRAG | 1 cut(s) | 32 |
| SmoI | CTYRAG | 1 cut(s) | 32 |
| StyI | CCWWGG | 1 cut(s) | 192 |
| TaqI | TCGA | 2 cut(s) | 136, 216 |
| Tru1I | TTAA | 1 cut(s) | 96 |
| Tru9I | TTAA | 1 cut(s) | 96 |
| TscAI | CASTG | 1 cut(s) | 24 |
| TspDTI | ATGAA | 1 cut(s) | 28 |
| TspGWI | ACGGA | 1 cut(s) | 220 |
| TspRI | CASTG | 1 cut(s) | 24 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 259 |
| Zsp2I | ATGCAT | 1 cut(s) | 104 |