Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g30210 |
| malus_domestica | MD17G1206900.v1.1 |
| prunus_persica | Prupe.3G081600_v2.0.a1 Prupe.3G081600_v2.0.a1 Prupe.3G081600_v2.0.a1 Prupe.3G081600_v2.0.a1 Prupe.3G081600_v2.0.a1 Prupe.3G081600_v2.0.a1 |
| pyrus_communis | pycom17g20970 |
| rosa_chinensis | RchiOBHm_Chr2g0136451 RchiOBHm_Chr5g0054651 RchiOBHm_Chr5g0054891 |
| rosa_laevigata | RLG00000034942 |
| rosa_multiflora | Rmu_sc0001998.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00025820 Rroxscaffold_1G00025830 Rroxscaffold_1G00026010 Rroxscaffold_1G00026310 Rroxscaffold_1G00026320 Rroxscaffold_2G00108280 |
| rosa_rugosa | Rorug02G0330400 Rorug02G0330500 Rorug05G0287600 |
| rosa_samantha | Rh2AG381500 Rh2AG381600 Rh2BG388200 Rh2BG388300 Rh2CG367800 Rh2CG367900 Rh2DG404600 Rh2DG404700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 417 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 452 |
| AciI | CCGC | 2 cut(s) | 587, 711 |
| AclWI | GGATC | 1 cut(s) | 536 |
| AcsI | RAATTY | 2 cut(s) | 13, 771 |
| AcuI | CTGAAG | 1 cut(s) | 751 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 452 |
| AgsI | TTSAA | 3 cut(s) | 250, 649, 693 |
| AjnI | CCWGG | 3 cut(s) | 93, 349, 658 |
| Alw21I | GWGCWC | 2 cut(s) | 363, 681 |
| Alw26I | GTCTC | 3 cut(s) | 47, 103, 628 |
| AlwI | GGATC | 1 cut(s) | 536 |
| ApeKI | GCWGC | 3 cut(s) | 119, 521, 714 |
| ApoI | RAATTY | 2 cut(s) | 13, 771 |
| AseI | ATTAAT | 1 cut(s) | 737 |
| AsuNHI | GCTAGC | 2 cut(s) | 233, 505 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 366, 398 |
| BauI | CACGAG | 1 cut(s) | 100 |
| BbsI | GAAGAC | 1 cut(s) | 612 |
| Bbv12I | GWGCWC | 2 cut(s) | 363, 681 |
| BbvI | GCAGC | 3 cut(s) | 106, 533, 726 |
| BccI | CCATC | 2 cut(s) | 68, 73 |
| BceAI | ACGGC | 1 cut(s) | 508 |
| BciT130I | CCWGG | 3 cut(s) | 95, 351, 660 |
| BcoDI | GTCTC | 3 cut(s) | 47, 103, 628 |
| BfaI | CTAG | 3 cut(s) | 234, 506, 615 |
| BglII | AGATCT | 1 cut(s) | 62 |
| BisI | GCNGC | 4 cut(s) | 120, 522, 712, 715 |
| BlsI | GCNGC | 4 cut(s) | 121, 523, 713, 716 |
| Bme1390I | CCNGG | 3 cut(s) | 95, 351, 660 |
| BmiI | GGNNCC | 1 cut(s) | 298 |
| BmrFI | CCNGG | 3 cut(s) | 95, 351, 660 |
| BmrI | ACTGGG | 1 cut(s) | 264 |
| BmsI | GCATC | 2 cut(s) | 162, 423 |
| BmtI | GCTAGC | 2 cut(s) | 237, 509 |
| BmuI | ACTGGG | 1 cut(s) | 264 |
| BpiI | GAAGAC | 1 cut(s) | 612 |
| BpuEI | CTTGAG | 2 cut(s) | 71, 706 |
| BsaI | GGTCTC | 1 cut(s) | 103 |
| BsaJI | CCNNGG | 2 cut(s) | 349, 659 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 452 |
| Bse118I | RCCGGY | 1 cut(s) | 436 |
| Bse1I | ACTGG | 2 cut(s) | 259, 300 |
| Bse3DI | GCAATG | 2 cut(s) | 117, 502 |
| BseBI | CCWGG | 3 cut(s) | 95, 351, 660 |
| BseDI | CCNNGG | 2 cut(s) | 349, 659 |
| BseGI | GGATG | 4 cut(s) | 84, 177, 224, 438 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 452 |
| BseMI | GCAATG | 2 cut(s) | 117, 502 |
| BseNI | ACTGG | 2 cut(s) | 259, 300 |
| BseXI | GCAGC | 3 cut(s) | 106, 533, 726 |
| BsiHKAI | GWGCWC | 2 cut(s) | 363, 681 |
| BsiSI | CCGG | 1 cut(s) | 437 |
| BslFI | GGGAC | 2 cut(s) | 157, 332 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 452 |
| BsmAI | GTCTC | 3 cut(s) | 47, 103, 628 |
| BsmFI | GGGAC | 2 cut(s) | 157, 332 |
| BsmI | GAATGC | 1 cut(s) | 112 |
| Bso31I | GGTCTC | 1 cut(s) | 103 |
| Bsp1286I | GDGCHC | 2 cut(s) | 363, 681 |
| Bsp143I | GATC | 3 cut(s) | 62, 379, 541 |
| BspACI | CCGC | 2 cut(s) | 587, 711 |
| BspHI | TCATGA | 1 cut(s) | 9 |
| BspLI | GGNNCC | 1 cut(s) | 298 |
| BspOI | GCTAGC | 2 cut(s) | 237, 509 |
| BspPI | GGATC | 1 cut(s) | 536 |
| BspTNI | GGTCTC | 1 cut(s) | 103 |
| BsrDI | GCAATG | 2 cut(s) | 117, 502 |
| BsrFI | RCCGGY | 1 cut(s) | 436 |
| BsrI | ACTGG | 2 cut(s) | 259, 300 |
| BssAI | RCCGGY | 1 cut(s) | 436 |
| BssECI | CCNNGG | 2 cut(s) | 349, 659 |
| BssMI | GATC | 3 cut(s) | 62, 379, 541 |
| BssSI | CACGAG | 1 cut(s) | 100 |
| Bst2BI | CACGAG | 1 cut(s) | 100 |
| Bst2UI | CCWGG | 3 cut(s) | 95, 351, 660 |
| Bst4CI | ACNGT | 1 cut(s) | 730 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 116 |
| BstC8I | GCNNGC | 4 cut(s) | 235, 397, 481, 507 |
| BstF5I | GGATG | 4 cut(s) | 84, 177, 224, 438 |
| BstKTI | GATC | 3 cut(s) | 65, 382, 544 |
| BstMAI | GTCTC | 3 cut(s) | 47, 103, 628 |
| BstMBI | GATC | 3 cut(s) | 62, 379, 541 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 116, 442 |
| BstNI | CCWGG | 3 cut(s) | 95, 351, 660 |
| BstSCI | CCNGG | 3 cut(s) | 93, 349, 658 |
| BstV1I | GCAGC | 3 cut(s) | 106, 533, 726 |
| BstV2I | GAAGAC | 1 cut(s) | 612 |
| BstX2I | RGATCY | 2 cut(s) | 62, 541 |
| BstYI | RGATCY | 2 cut(s) | 62, 541 |
| BtsCI | GGATG | 4 cut(s) | 84, 177, 224, 438 |
| BtsIMutI | CAGTG | 3 cut(s) | 220, 252, 307 |
| Cac8I | GCNNGC | 4 cut(s) | 235, 397, 481, 507 |
| CciI | TCATGA | 1 cut(s) | 9 |
| Cfr10I | RCCGGY | 1 cut(s) | 436 |
| CsiI | ACCWGGT | 1 cut(s) | 93 |
| CviAII | CATG | 3 cut(s) | 10, 269, 743 |
| DpnI | GATC | 3 cut(s) | 64, 381, 543 |
| DpnII | GATC | 3 cut(s) | 62, 379, 541 |
| Eco31I | GGTCTC | 1 cut(s) | 103 |
| Eco57I | CTGAAG | 1 cut(s) | 751 |
| EcoRI | GAATTC | 1 cut(s) | 13 |
| EcoRII | CCWGG | 3 cut(s) | 93, 349, 658 |
| FaeI | CATG | 3 cut(s) | 13, 272, 746 |
| FaqI | GGGAC | 2 cut(s) | 157, 332 |
| FatI | CATG | 3 cut(s) | 9, 268, 742 |
| Fnu4HI | GCNGC | 4 cut(s) | 120, 522, 712, 715 |
| FokI | GGATG | 4 cut(s) | 91, 184, 211, 445 |
| Fsp4HI | GCNGC | 4 cut(s) | 120, 522, 712, 715 |
| FspBI | CTAG | 3 cut(s) | 234, 506, 615 |
| GluI | GCNGC | 4 cut(s) | 120, 522, 712, 715 |
| HapII | CCGG | 1 cut(s) | 437 |
| Hin1II | CATG | 3 cut(s) | 13, 272, 746 |
| HindIII | AAGCTT | 1 cut(s) | 411 |
| HpaII | CCGG | 1 cut(s) | 437 |
| Hpy188I | TCNGA | 2 cut(s) | 429, 770 |
| Hpy188III | TCNNGA | 3 cut(s) | 10, 50, 685 |
| HpyAV | CCTTC | 2 cut(s) | 634, 796 |
| HpyCH4III | ACNGT | 1 cut(s) | 730 |
| HpyCH4V | TGCA | 8 cut(s) | 26, 110, 140, 175, 245, 268, 320, 483 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 116, 442 |
| Hsp92II | CATG | 3 cut(s) | 13, 272, 746 |
| Kzo9I | GATC | 3 cut(s) | 62, 379, 541 |
| LmnI | GCTCC | 1 cut(s) | 464 |
| Lsp1109I | GCAGC | 3 cut(s) | 106, 533, 726 |
| LweI | GCATC | 2 cut(s) | 162, 423 |
| MabI | ACCWGGT | 1 cut(s) | 93 |
| MaeI | CTAG | 3 cut(s) | 234, 506, 615 |
| MaeIII | GTNAC | 1 cut(s) | 310 |
| MalI | GATC | 3 cut(s) | 64, 381, 543 |
| MboI | GATC | 3 cut(s) | 62, 379, 541 |
| MboII | GAAGA | 3 cut(s) | 374, 617, 757 |
| MfeI | CAATTG | 1 cut(s) | 527 |
| MflI | RGATCY | 2 cut(s) | 62, 541 |
| MhlI | GDGCHC | 2 cut(s) | 363, 681 |
| MluCI | AATT | 8 cut(s) | 13, 219, 527, 576, 653, 734, 738, 771 |
| MnlI | CCTC | 3 cut(s) | 142, 423, 555 |
| MseI | TTAA | 3 cut(s) | 575, 737, 798 |
| MspI | CCGG | 1 cut(s) | 437 |
| MspR9I | CCNGG | 3 cut(s) | 95, 351, 660 |
| MunI | CAATTG | 1 cut(s) | 527 |
| Mva1269I | GAATGC | 1 cut(s) | 112 |
| MvaI | CCWGG | 3 cut(s) | 95, 351, 660 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 116, 442 |
| NdeII | GATC | 3 cut(s) | 62, 379, 541 |
| NheI | GCTAGC | 2 cut(s) | 233, 505 |
| NlaIII | CATG | 3 cut(s) | 13, 272, 746 |
| NlaIV | GGNNCC | 1 cut(s) | 298 |
| NmuCI | GTSAC | 1 cut(s) | 310 |
| PagI | TCATGA | 1 cut(s) | 9 |
| PctI | GAATGC | 1 cut(s) | 112 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 452 |
| PkrI | GCNGC | 4 cut(s) | 121, 523, 713, 716 |
| PshBI | ATTAAT | 1 cut(s) | 737 |
| PsiI | TTATAA | 1 cut(s) | 417 |
| Psp6I | CCWGG | 3 cut(s) | 93, 349, 658 |
| PspGI | CCWGG | 3 cut(s) | 93, 349, 658 |
| PspN4I | GGNNCC | 1 cut(s) | 298 |
| PsuI | RGATCY | 2 cut(s) | 62, 541 |
| SaqAI | TTAA | 3 cut(s) | 575, 737, 798 |
| SatI | GCNGC | 4 cut(s) | 120, 522, 712, 715 |
| Sau3AI | GATC | 3 cut(s) | 62, 379, 541 |
| ScrFI | CCNGG | 3 cut(s) | 95, 351, 660 |
| SduI | GDGCHC | 2 cut(s) | 363, 681 |
| SexAI | ACCWGGT | 1 cut(s) | 93 |
| SfaNI | GCATC | 2 cut(s) | 162, 423 |
| SmlI | CTYRAG | 2 cut(s) | 50, 685 |
| SmoI | CTYRAG | 2 cut(s) | 50, 685 |
| Sse9I | AATT | 8 cut(s) | 13, 219, 527, 576, 653, 734, 738, 771 |
| SsiI | CCGC | 2 cut(s) | 587, 711 |
| SspMI | CTAG | 3 cut(s) | 234, 506, 615 |
| StyD4I | CCNGG | 3 cut(s) | 93, 349, 658 |
| TaaI | ACNGT | 1 cut(s) | 730 |
| TaqI | TCGA | 2 cut(s) | 43, 391 |
| TasI | AATT | 8 cut(s) | 13, 219, 527, 576, 653, 734, 738, 771 |
| TauI | GCSGC | 1 cut(s) | 714 |
| Tru1I | TTAA | 3 cut(s) | 575, 737, 798 |
| Tru9I | TTAA | 3 cut(s) | 575, 737, 798 |
| TscAI | CASTG | 3 cut(s) | 220, 259, 307 |
| TseFI | GTSAC | 1 cut(s) | 310 |
| TseI | GCWGC | 3 cut(s) | 119, 521, 714 |
| Tsp45I | GTSAC | 1 cut(s) | 310 |
| TspDTI | ATGAA | 5 cut(s) | 26, 141, 195, 213, 731 |
| TspGWI | ACGGA | 1 cut(s) | 161 |
| TspRI | CASTG | 3 cut(s) | 220, 259, 307 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 452 |
| VspI | ATTAAT | 1 cut(s) | 737 |
| XapI | RAATTY | 2 cut(s) | 13, 771 |
| XspI | CTAG | 3 cut(s) | 234, 506, 615 |