Rorug02G0330500

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000002
OG0004863
Physical Location & Seq
Forward (+)
40755337 .. 40763614
8278 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug02G0330500.1

Sequence Viewer

Length: 2007 bp
ATGATCCTACCAGCGGTTAAGTTAGGAACCCTTGCCCTGAAAACCTTCTGCAAACCCATTGCCAATCGCCTCAAGAAAGAGGCTGGTTTGCACCCCAGGTTTAGGCAGTTCATCATTAACATTGCCCAGGCAAATCATCGATTTACAACAAATGTGCAAAGACGGATTTATGGTCATTCAACTGATGTTGCGATTCGTCCACTGAACGAGGAGAAAGCTGTCCAAGCTGCTGCAGAACTTCTTGGGGAGCTCTTTGTGTTCACGGTTGCAGGAACTGCACTTATTTTTGAAGTCCAAAGAAGTTCAAGATCAGAAGCAAGAAAGGAGGAGCTGCGTAAACAGGAATTACAGGCAATGAAACAAAGAGATGAAGAGCTAGAAAGAGAAGTTCAGCTGCTTAAGAAGAAGCTTGAAGAGCTGGAACAGCTTGCAAAAGGTAGAGGAATTGCTGGCCTTTTCAGTTTCAGGCATGCTCAAGCTACTGATAATGGAAACCGAAATCCCAGCTTGACCCCAGAAAAGATCGGCTTTTTCCCATCTATAAATATAGAGAGACCATTGTTGCTGTTTTCATATTATTGTTCAACACGTCTCTCCAGGGCTTTGCCCAAATCTCGGAACCCAAAAATCTGCACAGCGAGCATTCAGGAGTTTGAGGAAAGGGGAGCAATGATCAAGGACTCCAAGGGCAAGTGTGAGTCGTCGTCTCACAAGCTCTTGAAGGAAAAAGCAAAGACTCGCGTGGACTACCTCCAAGCTTTTCTGACCAATCTCAAGAGTGTGACGAAGGAGAACCGGACTGATGACAATGCAACCTTGGAGGAAGTGAATAAGATGCTTCAGGAGTGGAAAGCTGAGCTCAATGAGCCGTCTCCTGCGTCTTCTCTACTAGCTGATAGTCTGGGATCGTTTTCAGAGGAGTTAGCACGTCTCTTGAGAACTGATGAGGAGGATGATGCAACAAGTCCATTAAAGGAATTGCTACCTACTAAGCCAGAGAGCGATCTTCAAAACCTTCATTTGGGTAATTTGGTGCAATTTACAGAGGATTTTTATGTTTCTCCGGAGCCGCAAGAAACTTTTCAAGAATTTTATCAATGCGGAGATACTGCTTCAGGTTTCCAGAATCTAATGGTCGATAACTCTGGTTTTGATCATCACTTTGATTTTCATCAATATGTCAATGAAGGGCCATTCATTGGGGGGAACGATGTGAAACAGCCTGAAGAGGATGCTGCGCCAAGTGTTTTGCCAGTTATCTCTCCTACAGAACCTTCTTTTTTGGGGCCAACATGTGCTCTTTGGGATTGTTCCAGGCCTGCGGAATGTGGAAAGGACTATTGCTGTAACTTTCATGCTACATCAGCATTAGAAGAGGGTCAACCTGGAAAATCTCCAGTTTTTCGTCCTCGTGGCATTTCTTTAAAGGATAATGCACTTTTTGATGCACTTATTGCTTGGAATCAGGGAAAAGCTGTGGGCATACCCAATTGTGAAGGGGCAGCTACTCTAAAATCTCCATGGAATGACTCTAAGCTATTCAATCTTTCTTTCCTTGAGGGTGAAACAGTTAGAGAGTGGCTCTTTTTTGATAAGCCTAGAAGGGCATTTGGGACTGGAAACAGAAGACAGAGGTCATTGCCAGATCACAGTGGACGTGGTTGGCATGAATCAAGAAAGCAGATCATGAAGGAATTTGATGGGCAGAAAAGGTCCTATTATATGGATCCACAGCCCTCAATTGATCAGGACTGGCATTTGTTTGAATATGAGGTCAACAATTCTGATGCCTGTGCTCTATATAGGTTGGAGTTAAAGTTTGGCAGTGTAAAGAAAAGTCCAAAAGGAAAAGTATCAAATGAGGTTGCTGATCTGCAAAAGAAGATGGGAAAGCTCACTGCTGAGGTTGCCACTGATGGTGCAAACAATGCCAAAGGGAAAACTAAGAAAAAGGCTGATGCCGGCAATATTTTTTCTTCTCAAAGTCCGATGACTTCAACTCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00290 ko00650 ko00660 ko00770 ko01100 ko01110 ko01130 ko01210 ko01230 map00290 map00650 map00660 map00770 map01100 map01110 map01130 map01210 map01230
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

668

Amino Acids

75.09

Weight (kDa)

6.91

Isoelectric Point (pI)

50.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OPA3 PF07047 6 - 126 3.2e-43 Optic atrophy 3 protein (OPA3)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1199
AccII CGCG 1 cut(s) 741
AccIII TCCGGA 1 cut(s) 1063
AciI CCGC 4 cut(s) 14, 1070, 1101, 1322
AclWI GGATC 3 cut(s) 913, 1721, 1734
AcsI RAATTY 2 cut(s) 1088, 1694
AcuI CTGAAG 3 cut(s) 824, 1098, 1245
AfiI CCNNNNNNNGG 5 cut(s) 13, 102, 615, 1021, 1199
AflII CTTAAG 1 cut(s) 398
AflIII ACRYGT 2 cut(s) 587, 1292
AjiI CACGTC 3 cut(s) 590, 929, 1658
AjnI CCWGG 5 cut(s) 95, 126, 596, 1313, 1384
Alw21I GWGCWC 4 cut(s) 252, 861, 1300, 1798
Alw26I GTCTC 5 cut(s) 547, 596, 711, 876, 935
AlwI GGATC 3 cut(s) 913, 1721, 1734
AlwNI CAGNNNCTG 1 cut(s) 275
Aor13HI TCCGGA 1 cut(s) 1063
AoxI GGCC 4 cut(s) 451, 1190, 1286, 1316
ApeKI GCWGC 6 cut(s) 227, 230, 331, 394, 1235, 1502
ApoI RAATTY 2 cut(s) 1088, 1694
Asp700I GAANNNNTTC 2 cut(s) 44, 1080
AspLEI GCGC 1 cut(s) 1240
AspS9I GGNCC 3 cut(s) 1190, 1286, 1713
AsuHPI GGTGA 1 cut(s) 1574
AvaII GGWCC 1 cut(s) 1713
BamHI GGATCC 1 cut(s) 1726
BanII GRGCYC 2 cut(s) 252, 861
BauI CACGAG 1 cut(s) 1410
BbsI GAAGAC 2 cut(s) 873, 1633
Bbv12I GWGCWC 4 cut(s) 252, 861, 1300, 1798
BbvCI CCTCAGC 1 cut(s) 1902
BbvI GCAGC 6 cut(s) 214, 217, 318, 381, 1222, 1514
BccI CCATC 4 cut(s) 544, 1694, 1879, 1910
BceAI ACGGC 1 cut(s) 853
BciT130I CCWGG 5 cut(s) 97, 128, 598, 1315, 1386
BclI TGATCA 3 cut(s) 672, 1153, 1744
BcoDI GTCTC 5 cut(s) 547, 596, 711, 876, 935
BfaI CTAG 3 cut(s) 377, 890, 1599
BfmI CTRYAG 2 cut(s) 231, 1266
BfrI CTTAAG 1 cut(s) 398
BisI GCNGC 7 cut(s) 228, 231, 332, 395, 1070, 1236, 1503
BlpI GCTNAGC 1 cut(s) 855
BlsI GCNGC 7 cut(s) 229, 232, 333, 396, 1071, 1237, 1504
Bme1390I CCNGG 5 cut(s) 97, 128, 598, 1315, 1386
Bme18I GGWCC 1 cut(s) 1713
BmgBI CACGTC 3 cut(s) 590, 929, 1658
BmgT120I GGNCC 3 cut(s) 1190, 1286, 1713
BmiI GGNNCC 5 cut(s) 28, 620, 1068, 1287, 1728
BmrFI CCNGG 5 cut(s) 97, 128, 598, 1315, 1386
BmsI GCATC 6 cut(s) 825, 946, 1222, 1435, 1777, 1948
BoxI GACNNNNGTC 1 cut(s) 1633
BpiI GAAGAC 2 cut(s) 873, 1633
BplI GAGNNNNNCTC 2 cut(s) 1566, 1598
BpmI CTGGAG 2 cut(s) 580, 1380
Bpu10I CCTNAGC 1 cut(s) 1902
Bpu1102I GCTNAGC 1 cut(s) 855
BpuEI CTTGAG 5 cut(s) 56, 459, 758, 955, 1577
Bsa29I ATCGAT 1 cut(s) 139
BsaBI GATNNNNATC 1 cut(s) 1170
BsaI GGTCTC 1 cut(s) 547
BsaJI CCNNGG 6 cut(s) 95, 126, 597, 684, 816, 1520
BsaWI WCCGGW 2 cut(s) 795, 1063
BsaXI ACNNNNNCTCC 3 cut(s) 1802, 1832, 1984
Bsc4I CCNNNNNNNGG 5 cut(s) 13, 102, 615, 1021, 1199
Bse118I RCCGGY 1 cut(s) 1961
Bse1I ACTGG 4 cut(s) 1253, 1397, 1621, 1757
Bse3DI GCAATG 5 cut(s) 57, 120, 360, 675, 1637
Bse8I GATNNNNATC 1 cut(s) 1170
BseAI TCCGGA 1 cut(s) 1063
BseBI CCWGG 5 cut(s) 97, 128, 598, 1315, 1386
BseCI ATCGAT 1 cut(s) 139
BseDI CCNNGG 6 cut(s) 95, 126, 597, 684, 816, 1520
BseGI GGATG 2 cut(s) 958, 1237
BseJI GATNNNNATC 1 cut(s) 1170
BseLI CCNNNNNNNGG 5 cut(s) 13, 102, 615, 1021, 1199
BseMI GCAATG 5 cut(s) 57, 120, 360, 675, 1637
BseMII CTCAG 2 cut(s) 846, 1893
BseNI ACTGG 4 cut(s) 1253, 1397, 1621, 1757
BseRI GAGGAG 4 cut(s) 224, 341, 932, 962
BseXI GCAGC 6 cut(s) 214, 217, 318, 381, 1222, 1514
BseYI CCCAGC 1 cut(s) 503
BsgI GTGCAG 2 cut(s) 261, 616
Bsh1236I CGCG 1 cut(s) 741
BshFI GGCC 4 cut(s) 453, 1192, 1288, 1318
BshVI ATCGAT 1 cut(s) 139
BsiHKAI GWGCWC 4 cut(s) 252, 861, 1300, 1798
BsiSI CCGG 3 cut(s) 796, 1064, 1962
BslFI GGGAC 1 cut(s) 1627
BslI CCNNNNNNNGG 5 cut(s) 13, 102, 615, 1021, 1199
BsmAI GTCTC 5 cut(s) 547, 596, 711, 876, 935
BsmBI CGTCTC 4 cut(s) 596, 711, 876, 935
BsmFI GGGAC 1 cut(s) 1627
BsmI GAATGC 1 cut(s) 642
BsnI GGCC 4 cut(s) 453, 1192, 1288, 1318
Bso31I GGTCTC 1 cut(s) 547
Bsp1286I GDGCHC 4 cut(s) 252, 861, 1300, 1798
Bsp13I TCCGGA 1 cut(s) 1063
Bsp1720I GCTNAGC 1 cut(s) 855
Bsp19I CCATGG 1 cut(s) 1520
BspACI CCGC 4 cut(s) 14, 1070, 1101, 1322
BspANI GGCC 4 cut(s) 453, 1192, 1288, 1318
BspCNI CTCAG 2 cut(s) 847, 1894
BspDI ATCGAT 1 cut(s) 139
BspEI TCCGGA 1 cut(s) 1063
BspFNI CGCG 1 cut(s) 741
BspHI TCATGA 1 cut(s) 1686
BspLI GGNNCC 5 cut(s) 28, 620, 1068, 1287, 1728
BspMAI CTGCAG 1 cut(s) 235
BspPI GGATC 3 cut(s) 913, 1721, 1734
BspQI GCTCTTC 2 cut(s) 366, 408
BspTI CTTAAG 1 cut(s) 398
BspTNI GGTCTC 1 cut(s) 547
BsrDI GCAATG 5 cut(s) 57, 120, 360, 675, 1637
BsrFI RCCGGY 1 cut(s) 1961
BsrI ACTGG 4 cut(s) 1253, 1397, 1621, 1757
BssAI RCCGGY 1 cut(s) 1961
BssECI CCNNGG 6 cut(s) 95, 126, 597, 684, 816, 1520
BssSI CACGAG 1 cut(s) 1410
BssT1I CCWWGG 3 cut(s) 684, 816, 1520
Bst2BI CACGAG 1 cut(s) 1410
Bst2UI CCWGG 5 cut(s) 97, 128, 598, 1315, 1386
Bst4CI ACNGT 3 cut(s) 265, 1570, 1652
Bst6I CTCTTC 4 cut(s) 366, 408, 1221, 1368
BstAFI CTTAAG 1 cut(s) 398
BstAPI GCANNNNNTGC 3 cut(s) 275, 1454, 1928
BstC8I GCNNGC 6 cut(s) 429, 451, 471, 640, 1320, 1963
BstDEI CTNAG 5 cut(s) 855, 990, 1533, 1902, 1944
BstDSI CCRYGG 1 cut(s) 1520
BstF5I GGATG 2 cut(s) 958, 1237
BstFNI CGCG 1 cut(s) 741
BstHHI GCGC 1 cut(s) 1240
BstMAI GTCTC 5 cut(s) 547, 596, 711, 876, 935
BstNI CCWGG 5 cut(s) 97, 128, 598, 1315, 1386
BstNSI RCATGY 2 cut(s) 473, 1296
BstPAI GACNNNNGTC 1 cut(s) 1633
BstSCI CCNGG 5 cut(s) 95, 126, 596, 1313, 1384
BstSFI CTRYAG 2 cut(s) 231, 1266
BstUI CGCG 1 cut(s) 741
BstV1I GCAGC 6 cut(s) 214, 217, 318, 381, 1222, 1514
BstV2I GAAGAC 2 cut(s) 873, 1633
BstX2I RGATCY 1 cut(s) 1726
BstYI RGATCY 1 cut(s) 1726
Bsu15I ATCGAT 1 cut(s) 139
BsuRI GGCC 4 cut(s) 453, 1192, 1288, 1318
BsuTUI ATCGAT 1 cut(s) 139
BtgI CCRYGG 1 cut(s) 1520
BtrI CACGTC 3 cut(s) 590, 929, 1658
BtsCI GGATG 2 cut(s) 958, 1237
BtsI GCAGTG 2 cut(s) 1831, 1896
BtsIMutI CAGTG 5 cut(s) 200, 1657, 1831, 1896, 1911
Cac8I GCNNGC 6 cut(s) 429, 451, 471, 640, 1320, 1963
CaiI CAGNNNCTG 1 cut(s) 275
CciI TCATGA 1 cut(s) 1686
CfoI GCGC 1 cut(s) 1240
Cfr10I RCCGGY 1 cut(s) 1961
Cfr13I GGNCC 3 cut(s) 1190, 1286, 1713
ClaI ATCGAT 1 cut(s) 139
CseI GACGC 1 cut(s) 867
CviAII CATG 6 cut(s) 470, 1293, 1355, 1521, 1667, 1687
DdeI CTNAG 5 cut(s) 855, 990, 1533, 1902, 1944
DraI TTTAAA 1 cut(s) 1425
Eam1104I CTCTTC 4 cut(s) 366, 408, 1221, 1368
EarI CTCTTC 4 cut(s) 366, 408, 1221, 1368
Ecl136II GAGCTC 2 cut(s) 250, 859
Eco130I CCWWGG 3 cut(s) 684, 816, 1520
Eco147I AGGCCT 1 cut(s) 1318
Eco24I GRGCYC 2 cut(s) 252, 861
Eco31I GGTCTC 1 cut(s) 547
Eco47I GGWCC 1 cut(s) 1713
Eco53kI GAGCTC 2 cut(s) 250, 859
Eco57I CTGAAG 3 cut(s) 824, 1098, 1245
EcoICRI GAGCTC 2 cut(s) 250, 859
EcoO109I RGGNCCY 1 cut(s) 1713
EcoRII CCWGG 5 cut(s) 95, 126, 596, 1313, 1384
EcoT14I CCWWGG 3 cut(s) 684, 816, 1520
EcoT38I GRGCYC 2 cut(s) 252, 861
ErhI CCWWGG 3 cut(s) 684, 816, 1520
Esp3I CGTCTC 4 cut(s) 596, 711, 876, 935
FaeI CATG 6 cut(s) 473, 1296, 1358, 1524, 1670, 1690
FalI AAGNNNNNCTT 2 cut(s) 512, 544
FaqI GGGAC 1 cut(s) 1627
FatI CATG 6 cut(s) 469, 1292, 1354, 1520, 1666, 1686
FbaI TGATCA 3 cut(s) 672, 1153, 1744
Fnu4HI GCNGC 7 cut(s) 228, 231, 332, 395, 1070, 1236, 1503
FokI GGATG 2 cut(s) 965, 1244
FriOI GRGCYC 2 cut(s) 252, 861
Fsp4HI GCNGC 7 cut(s) 228, 231, 332, 395, 1070, 1236, 1503
FspBI CTAG 3 cut(s) 377, 890, 1599
GlaI GCGC 1 cut(s) 1239
GluI GCNGC 7 cut(s) 228, 231, 332, 395, 1070, 1236, 1503
GsaI CCCAGC 1 cut(s) 507
GsuI CTGGAG 2 cut(s) 580, 1380
HaeIII GGCC 4 cut(s) 453, 1192, 1288, 1318
HapII CCGG 3 cut(s) 796, 1064, 1962
HgaI GACGC 1 cut(s) 867
HhaI GCGC 1 cut(s) 1240
Hin1II CATG 6 cut(s) 473, 1296, 1358, 1524, 1670, 1690
Hin6I GCGC 1 cut(s) 1238
HinP1I GCGC 1 cut(s) 1238
HincII GTYRAC 2 cut(s) 1382, 1777
HindII GTYRAC 2 cut(s) 1382, 1777
HindIII AAGCTT 2 cut(s) 407, 756
HinfI GANTC 8 cut(s) 193, 680, 698, 736, 1126, 1462, 1529, 1670
HpaII CCGG 3 cut(s) 796, 1064, 1962
HphI GGTGA 1 cut(s) 1574
Hpy166II GTNNAC 7 cut(s) 200, 261, 338, 745, 1382, 1655, 1777
Hpy188I TCNGA 6 cut(s) 313, 618, 765, 916, 1786, 1989
Hpy8I GTNNAC 7 cut(s) 200, 261, 338, 745, 1382, 1655, 1777
Hpy99I CGWCG 1 cut(s) 706
HpyAV CCTTC 9 cut(s) 55, 715, 781, 1025, 1181, 1284, 1490, 1596, 1684
HpyCH4III ACNGT 3 cut(s) 265, 1570, 1652
HpyCH4IV ACGT 3 cut(s) 589, 928, 1657
HpyF3I CTNAG 5 cut(s) 855, 990, 1533, 1902, 1944
HpySE526I ACGT 3 cut(s) 589, 928, 1657
Hsp92II CATG 6 cut(s) 473, 1296, 1358, 1524, 1670, 1690
HspAI GCGC 1 cut(s) 1238
Kpn2I TCCGGA 1 cut(s) 1063
KroI GCCGGC 1 cut(s) 1961
KroNI GCCGGC 1 cut(s) 1963
Ksp22I TGATCA 3 cut(s) 672, 1153, 1744
LguI GCTCTTC 2 cut(s) 366, 408
LmnI GCTCC 4 cut(s) 247, 328, 665, 1066
Lsp1109I GCAGC 6 cut(s) 214, 217, 318, 381, 1222, 1514
LweI GCATC 6 cut(s) 825, 946, 1222, 1435, 1777, 1948
MaeI CTAG 3 cut(s) 377, 890, 1599
MaeII ACGT 3 cut(s) 589, 928, 1657
MaeIII GTNAC 2 cut(s) 781, 1346
MfeI CAATTG 2 cut(s) 1489, 1740
MflI RGATCY 1 cut(s) 1726
MhlI GDGCHC 4 cut(s) 252, 861, 1300, 1798
MlyI GAGTC 4 cut(s) 674, 707, 730, 1523
MmeI TCCRAC 1 cut(s) 1788
MroI TCCGGA 1 cut(s) 1063
MroNI GCCGGC 1 cut(s) 1961
MroXI GAANNNNTTC 2 cut(s) 44, 1080
MseI TTAA 6 cut(s) 18, 117, 399, 971, 1424, 1814
MslI CAYNNNNRTG 1 cut(s) 1176
MspA1I CMGCKG 2 cut(s) 14, 394
MspCI CTTAAG 1 cut(s) 398
MspI CCGG 3 cut(s) 796, 1064, 1962
MspR9I CCNGG 5 cut(s) 97, 128, 598, 1315, 1386
MunI CAATTG 2 cut(s) 1489, 1740
Mva1269I GAATGC 1 cut(s) 642
MvaI CCWGG 5 cut(s) 97, 128, 598, 1315, 1386
MvnI CGCG 1 cut(s) 741
NaeI GCCGGC 1 cut(s) 1963
NcoI CCATGG 1 cut(s) 1520
NgoMIV GCCGGC 1 cut(s) 1961
NlaIII CATG 6 cut(s) 473, 1296, 1358, 1524, 1670, 1690
NlaIV GGNNCC 5 cut(s) 28, 620, 1068, 1287, 1728
NmuCI GTSAC 1 cut(s) 781
NspI RCATGY 2 cut(s) 473, 1296
PaeI GCATGC 1 cut(s) 473
PagI TCATGA 1 cut(s) 1686
PceI AGGCCT 1 cut(s) 1318
PciI ACATGT 1 cut(s) 1292
PciSI GCTCTTC 2 cut(s) 366, 408
PctI GAATGC 1 cut(s) 642
PdiI GCCGGC 1 cut(s) 1963
PdmI GAANNNNTTC 2 cut(s) 44, 1080
PfeI GAWTC 4 cut(s) 193, 1126, 1462, 1670
PflMI CCANNNNNTGG 1 cut(s) 1199
PkrI GCNGC 7 cut(s) 229, 232, 333, 396, 1071, 1237, 1504
PleI GAGTC 4 cut(s) 674, 706, 730, 1523
PpsI GAGTC 4 cut(s) 674, 706, 730, 1523
PpuMI RGGWCCY 1 cut(s) 1713
PscI ACATGT 1 cut(s) 1292
PshAI GACNNNNGTC 1 cut(s) 1633
Psp124BI GAGCTC 2 cut(s) 252, 861
Psp5II RGGWCCY 1 cut(s) 1713
Psp6I CCWGG 5 cut(s) 95, 126, 596, 1313, 1384
PspFI CCCAGC 1 cut(s) 503
PspGI CCWGG 5 cut(s) 95, 126, 596, 1313, 1384
PspN4I GGNNCC 5 cut(s) 28, 620, 1068, 1287, 1728
PspPI GGNCC 3 cut(s) 1190, 1286, 1713
PspPPI RGGWCCY 1 cut(s) 1713
PstI CTGCAG 1 cut(s) 235
PstNI CAGNNNCTG 1 cut(s) 275
PsuI RGATCY 1 cut(s) 1726
PvuII CAGCTG 1 cut(s) 394
RseI CAYNNNNRTG 1 cut(s) 1176
SacI GAGCTC 2 cut(s) 252, 861
SapI GCTCTTC 2 cut(s) 366, 408
SaqAI TTAA 6 cut(s) 18, 117, 399, 971, 1424, 1814
SatI GCNGC 7 cut(s) 228, 231, 332, 395, 1070, 1236, 1503
Sau96I GGNCC 3 cut(s) 1190, 1286, 1713
SchI GAGTC 4 cut(s) 674, 707, 730, 1523
ScrFI CCNGG 5 cut(s) 97, 128, 598, 1315, 1386
SduI GDGCHC 4 cut(s) 252, 861, 1300, 1798
SfaNI GCATC 6 cut(s) 825, 946, 1222, 1435, 1777, 1948
SfcI CTRYAG 2 cut(s) 231, 1266
SinI GGWCC 1 cut(s) 1713
SmiMI CAYNNNNRTG 1 cut(s) 1176
SmlI CTYRAG 6 cut(s) 71, 398, 474, 773, 934, 1556
SmoI CTYRAG 6 cut(s) 71, 398, 474, 773, 934, 1556
SphI GCATGC 1 cut(s) 473
SseBI AGGCCT 1 cut(s) 1318
SsiI CCGC 4 cut(s) 14, 1070, 1101, 1322
SspI AATATT 1 cut(s) 1969
SspMI CTAG 3 cut(s) 377, 890, 1599
SstI GAGCTC 2 cut(s) 252, 861
StuI AGGCCT 1 cut(s) 1318
StyD4I CCNGG 5 cut(s) 95, 126, 596, 1313, 1384
StyI CCWWGG 3 cut(s) 684, 816, 1520
TaaI ACNGT 3 cut(s) 265, 1570, 1652
TaiI ACGT 3 cut(s) 592, 931, 1660
TaqI TCGA 2 cut(s) 139, 1137
TauI GCSGC 1 cut(s) 1072
TfiI GAWTC 4 cut(s) 193, 1126, 1462, 1670
Tru1I TTAA 6 cut(s) 18, 117, 399, 971, 1424, 1814
Tru9I TTAA 6 cut(s) 18, 117, 399, 971, 1424, 1814
TscAI CASTG 5 cut(s) 207, 1657, 1831, 1903, 1918
TseFI GTSAC 1 cut(s) 781
TseI GCWGC 6 cut(s) 227, 230, 331, 394, 1235, 1502
Tsp45I GTSAC 1 cut(s) 781
TspGWI ACGGA 1 cut(s) 178
TspRI CASTG 5 cut(s) 207, 1657, 1831, 1903, 1918
Van91I CCANNNNNTGG 1 cut(s) 1199
Vha464I CTTAAG 1 cut(s) 398
VpaK11BI GGWCC 1 cut(s) 1713
XapI RAATTY 2 cut(s) 1088, 1694
XceI RCATGY 2 cut(s) 473, 1296
XmnI GAANNNNTTC 2 cut(s) 44, 1080
XspI CTAG 3 cut(s) 377, 890, 1599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.