Prupe.1G111300_v2.0.a1

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
8871616 .. 8873857
2242 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G111300.1

Sequence Viewer

Length: 987 bp
ATGTCGCCTGCAGAGACAAAAGAACCAAAGAGGGCCTATGTGACCTTCTTGGCTGGAAATGGAGACTATTGGAAAGGTGTGGTTGGCCTGGCCAAGGGCCTTAGGAAGACCAAATCTGCATACCCACTTGTGGTGGCCGTCCTGCCTGATGTTCCTGAGGAGCACCTCCAGATTCTTGAATCTCAAGGATGCATTGTGCGCCAGATTGAGCCTGTCTACCCTCCTGAAAACCAAACTCAATTTGCCATGGCTTATTATGTCATCAACTACTCAAAACTTCGTATTTGGGAGTTTGTGGAGTACGAGAAGATGATATACTTGGATGGAGACATACAAGTGTTTGATAATATCGATCACCTTTTCGACATGCCCGAGGGTTATTTTTATGCTGTGATGGATTGCTTTTGTGAGAAGACATGGAGTAAGACTCCTCAGTATAAGATTGGATACTGCCAGCAGTGCCCTGAGAAGGTTCAATGGCCAGCCGACTTGGGCTCACCACCACCACCTTACTTCAATGCTGGCATGTTTGTCTATGAGCCTCGTCTTCCGACTTACTGTGATCTCTTAGAGACCGTCAAAGTCACCCCTCCTTCCTCATTTGCCGAGCAGGACTTTTTGAACATGTTCTTCAAGGATGTATACAAGCCTATCCCACCTGCATACAATCTTGTATTGGCTCTCTTGTGGCGCCACCCTGAAAATTTGGACATTGACCATGTGAAGGTTGTTCATTACTGTGCTGCGGGATCAAAGCCATGGAGGTATACAGGAGAGGAAGAGCATATGGAGAGAGAAGACATAAAGATGCTGGTGAAGAAGTGGTGGGATATTTATGAGGACCCGTCACTGGATTACATTAAGAATAATGATGATGATGAAATTGTGGTGAAGGCAGACGAGCATGTAAAGGTTGGACCACCCTTTATTGATGTAATATCGGAGACTGATGCTGTTGACCAAAGGAGTGCACCATCTGCCGCTTGA

Protein Analysis

329

Amino Acids

37.93

Weight (kDa)

4.77

Isoelectric Point (pI)

44.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 667
Acc36I ACCTGC 1 cut(s) 667
AccB1I GGYRCC 1 cut(s) 690
AccI GTMKAC 3 cut(s) 216, 642, 767
AciI CCGC 2 cut(s) 746, 981
AclWI GGATC 1 cut(s) 757
AcoI YGGCCR 3 cut(s) 90, 135, 479
AcsI RAATTY 1 cut(s) 703
AcyI GRCGYC 1 cut(s) 691
AfaI GTAC 1 cut(s) 302
AfiI CCNNNNNNNGG 5 cut(s) 94, 130, 469, 724, 850
AflIII ACRYGT 1 cut(s) 624
AgsI TTSAA 5 cut(s) 179, 476, 517, 622, 634
AjnI CCWGG 1 cut(s) 87
Alw21I GWGCWC 2 cut(s) 165, 973
Alw26I GTCTC 5 cut(s) 8, 57, 321, 566, 938
Alw44I GTGCAC 1 cut(s) 969
AlwI GGATC 1 cut(s) 757
Ama87I CYCGRG 1 cut(s) 371
AoxI GGCC 6 cut(s) 33, 85, 90, 97, 135, 479
ApaLI GTGCAC 1 cut(s) 969
ApeKI GCWGC 1 cut(s) 743
ApoI RAATTY 1 cut(s) 703
Asp700I GAANNNNTTC 1 cut(s) 626
AspLEI GCGC 2 cut(s) 201, 693
AspS9I GGNCC 4 cut(s) 33, 97, 841, 917
AsuHPI GGTGA 5 cut(s) 347, 489, 577, 826, 901
AvaI CYCGRG 1 cut(s) 371
AvaII GGWCC 2 cut(s) 841, 917
AxyI CCTNAGG 2 cut(s) 101, 156
BaeGI GKGCMC 2 cut(s) 464, 973
BalI TGGCCA 2 cut(s) 92, 481
BanI GGYRCC 1 cut(s) 690
BanII GRGCYC 1 cut(s) 497
BarI GAAGNNNNNNTAC 2 cut(s) 299, 331
BbsI GAAGAC 4 cut(s) 113, 419, 539, 804
Bbv12I GWGCWC 2 cut(s) 165, 973
BbvI GCAGC 1 cut(s) 730
BccI CCATC 3 cut(s) 317, 388, 982
BceAI ACGGC 1 cut(s) 122
BciT130I CCWGG 1 cut(s) 89
BciVI GTATCC 1 cut(s) 440
BcoDI GTCTC 5 cut(s) 8, 57, 321, 566, 938
BfmI CTRYAG 1 cut(s) 9
BfoI RGCGCY 1 cut(s) 694
BfuAI ACCTGC 1 cut(s) 667
BfuI GTATCC 1 cut(s) 440
BisI GCNGC 2 cut(s) 744, 981
BlsI GCNGC 2 cut(s) 745, 982
Bme1390I CCNGG 1 cut(s) 89
Bme18I GGWCC 2 cut(s) 841, 917
BmeT110I CYCGRG 1 cut(s) 371
BmgT120I GGNCC 4 cut(s) 33, 97, 841, 917
BmiI GGNNCC 2 cut(s) 692, 843
BmrFI CCNGG 1 cut(s) 89
BmsI GCATC 3 cut(s) 179, 798, 940
BpiI GAAGAC 4 cut(s) 113, 419, 539, 804
BplI GAGNNNNNCTC 2 cut(s) 412, 444
BpmI CTGGAG 1 cut(s) 152
BpuEI CTTGAG 1 cut(s) 168
Bsa29I ATCGAT 1 cut(s) 351
BsaHI GRCGYC 1 cut(s) 691
BsaI GGTCTC 1 cut(s) 566
BsaJI CCNNGG 4 cut(s) 93, 246, 372, 758
Bsc4I CCNNNNNNNGG 5 cut(s) 94, 130, 469, 724, 850
Bse1I ACTGG 1 cut(s) 855
Bse21I CCTNAGG 2 cut(s) 101, 156
BseBI CCWGG 1 cut(s) 89
BseCI ATCGAT 1 cut(s) 351
BseDI CCNNGG 4 cut(s) 93, 246, 372, 758
BseGI GGATG 3 cut(s) 194, 328, 643
BseLI CCNNNNNNNGG 5 cut(s) 94, 130, 469, 724, 850
BseMII CTCAG 3 cut(s) 147, 446, 456
BseNI ACTGG 1 cut(s) 855
BseRI GAGGAG 2 cut(s) 173, 420
BseSI GKGCMC 2 cut(s) 464, 973
BseXI GCAGC 1 cut(s) 730
BshFI GGCC 6 cut(s) 35, 87, 92, 99, 137, 481
BshNI GGYRCC 1 cut(s) 690
BshVI ATCGAT 1 cut(s) 351
BsiHKAI GWGCWC 2 cut(s) 165, 973
BsiHKCI CYCGRG 1 cut(s) 371
BslI CCNNNNNNNGG 5 cut(s) 94, 130, 469, 724, 850
BsmAI GTCTC 5 cut(s) 8, 57, 321, 566, 938
BsnI GGCC 6 cut(s) 35, 87, 92, 99, 137, 481
Bso31I GGTCTC 1 cut(s) 566
BsoBI CYCGRG 1 cut(s) 371
Bsp1286I GDGCHC 4 cut(s) 165, 464, 497, 973
Bsp143I GATC 3 cut(s) 352, 562, 749
Bsp19I CCATGG 2 cut(s) 246, 758
BspACI CCGC 2 cut(s) 746, 981
BspANI GGCC 6 cut(s) 35, 87, 92, 99, 137, 481
BspCNI CTCAG 3 cut(s) 148, 445, 457
BspDI ATCGAT 1 cut(s) 351
BspLI GGNNCC 2 cut(s) 692, 843
BspMAI CTGCAG 1 cut(s) 13
BspMI ACCTGC 1 cut(s) 667
BspPI GGATC 1 cut(s) 757
BspQI GCTCTTC 1 cut(s) 774
BspT107I GGYRCC 1 cut(s) 690
BspTNI GGTCTC 1 cut(s) 566
BsrI ACTGG 1 cut(s) 855
BssECI CCNNGG 4 cut(s) 93, 246, 372, 758
BssMI GATC 3 cut(s) 352, 562, 749
BssNAI GTATAC 2 cut(s) 643, 768
BssNI GRCGYC 1 cut(s) 691
BssT1I CCWWGG 3 cut(s) 93, 246, 758
Bst1107I GTATAC 2 cut(s) 643, 768
Bst2UI CCWGG 1 cut(s) 89
Bst4CI ACNGT 3 cut(s) 560, 577, 740
Bst6I CTCTTC 1 cut(s) 774
BstACI GRCGYC 1 cut(s) 691
BstAPI GCANNNNNTGC 1 cut(s) 977
BstC8I GCNNGC 4 cut(s) 9, 455, 483, 523
BstDEI CTNAG 5 cut(s) 101, 156, 432, 465, 568
BstDSI CCRYGG 2 cut(s) 246, 758
BstENI CCTNNNNNAGG 1 cut(s) 92
BstF5I GGATG 3 cut(s) 194, 328, 643
BstH2I RGCGCY 1 cut(s) 694
BstHHI GCGC 2 cut(s) 201, 693
BstKTI GATC 3 cut(s) 355, 565, 752
BstMAI GTCTC 5 cut(s) 8, 57, 321, 566, 938
BstMBI GATC 3 cut(s) 352, 562, 749
BstMWI GCNNNNNNNGC 3 cut(s) 198, 459, 977
BstNI CCWGG 1 cut(s) 89
BstNSI RCATGY 4 cut(s) 370, 529, 628, 908
BstSCI CCNGG 1 cut(s) 87
BstSFI CTRYAG 1 cut(s) 9
BstSLI GKGCMC 2 cut(s) 464, 973
BstV1I GCAGC 1 cut(s) 730
BstV2I GAAGAC 4 cut(s) 113, 419, 539, 804
BstZ17I GTATAC 2 cut(s) 643, 768
Bsu15I ATCGAT 1 cut(s) 351
Bsu36I CCTNAGG 2 cut(s) 101, 156
BsuI GTATCC 1 cut(s) 440
BsuRI GGCC 6 cut(s) 35, 87, 92, 99, 137, 481
BsuTUI ATCGAT 1 cut(s) 351
BtgI CCRYGG 2 cut(s) 246, 758
BtsCI GGATG 3 cut(s) 194, 328, 643
BtsI GCAGTG 1 cut(s) 464
BtsIMutI CAGTG 2 cut(s) 464, 848
BveI ACCTGC 1 cut(s) 667
Cac8I GCNNGC 4 cut(s) 9, 455, 483, 523
CfoI GCGC 2 cut(s) 201, 693
Cfr13I GGNCC 4 cut(s) 33, 97, 841, 917
ClaI ATCGAT 1 cut(s) 351
Csp6I GTAC 1 cut(s) 301
CviAII CATG 8 cut(s) 247, 367, 417, 526, 625, 719, 759, 905
CviQI GTAC 1 cut(s) 301
DdeI CTNAG 5 cut(s) 101, 156, 432, 465, 568
DinI GGCGCC 1 cut(s) 692
DpnI GATC 3 cut(s) 354, 564, 751
DpnII GATC 3 cut(s) 352, 562, 749
EaeI YGGCCR 3 cut(s) 90, 135, 479
Eam1104I CTCTTC 1 cut(s) 774
EarI CTCTTC 1 cut(s) 774
Eco130I CCWWGG 3 cut(s) 93, 246, 758
Eco24I GRGCYC 1 cut(s) 497
Eco31I GGTCTC 1 cut(s) 566
Eco47I GGWCC 2 cut(s) 841, 917
Eco81I CCTNAGG 2 cut(s) 101, 156
Eco88I CYCGRG 1 cut(s) 371
EcoNI CCTNNNNNAGG 1 cut(s) 92
EcoO109I RGGNCCY 3 cut(s) 33, 97, 841
EcoRII CCWGG 1 cut(s) 87
EcoT14I CCWWGG 3 cut(s) 93, 246, 758
EcoT22I ATGCAT 1 cut(s) 194
EcoT38I GRGCYC 1 cut(s) 497
EgeI GGCGCC 1 cut(s) 692
EheI GGCGCC 1 cut(s) 692
ErhI CCWWGG 3 cut(s) 93, 246, 758
FaeI CATG 8 cut(s) 250, 370, 420, 529, 628, 722, 762, 908
FatI CATG 8 cut(s) 246, 366, 416, 525, 624, 718, 758, 904
FauI CCCGC 1 cut(s) 739
FauNDI CATATG 1 cut(s) 786
FblI GTMKAC 3 cut(s) 216, 642, 767
Fnu4HI GCNGC 2 cut(s) 744, 981
FokI GGATG 3 cut(s) 201, 335, 650
FriOI GRGCYC 1 cut(s) 497
Fsp4HI GCNGC 2 cut(s) 744, 981
GlaI GCGC 2 cut(s) 200, 692
GluI GCNGC 2 cut(s) 744, 981
GsuI CTGGAG 1 cut(s) 152
HaeII RGCGCY 1 cut(s) 694
HaeIII GGCC 6 cut(s) 35, 87, 92, 99, 137, 481
HhaI GCGC 2 cut(s) 201, 693
Hin1I GRCGYC 1 cut(s) 691
Hin1II CATG 8 cut(s) 250, 370, 420, 529, 628, 722, 762, 908
Hin6I GCGC 2 cut(s) 199, 691
HinP1I GCGC 2 cut(s) 199, 691
HincII GTYRAC 1 cut(s) 958
HindII GTYRAC 1 cut(s) 958
HinfI GANTC 3 cut(s) 172, 179, 427
HphI GGTGA 5 cut(s) 347, 489, 577, 826, 901
Hpy166II GTNNAC 5 cut(s) 217, 643, 768, 958, 971
Hpy188I TCNGA 2 cut(s) 552, 943
Hpy188III TCNNGA 4 cut(s) 155, 169, 176, 224
Hpy8I GTNNAC 5 cut(s) 217, 643, 768, 958, 971
HpyAV CCTTC 5 cut(s) 55, 463, 603, 718, 886
HpyCH4III ACNGT 3 cut(s) 560, 577, 740
HpyCH4V TGCA 5 cut(s) 11, 119, 192, 662, 971
HpyF10VI GCNNNNNNNGC 3 cut(s) 198, 459, 977
HpyF3I CTNAG 5 cut(s) 101, 156, 432, 465, 568
Hsp92I GRCGYC 1 cut(s) 691
Hsp92II CATG 8 cut(s) 250, 370, 420, 529, 628, 722, 762, 908
HspAI GCGC 2 cut(s) 199, 691
KasI GGCGCC 1 cut(s) 690
Kzo9I GATC 3 cut(s) 352, 562, 749
LguI GCTCTTC 1 cut(s) 774
LmnI GCTCC 1 cut(s) 160
Lsp1109I GCAGC 1 cut(s) 730
LweI GCATC 3 cut(s) 179, 798, 940
MaeIII GTNAC 3 cut(s) 40, 583, 846
MalI GATC 3 cut(s) 354, 564, 751
MboI GATC 3 cut(s) 352, 562, 749
MboII GAAGA 8 cut(s) 118, 319, 424, 539, 622, 791, 809, 829
MhlI GDGCHC 4 cut(s) 165, 464, 497, 973
MlsI TGGCCA 2 cut(s) 92, 481
MluCI AATT 3 cut(s) 239, 703, 882
MluNI TGGCCA 2 cut(s) 92, 481
Mly113I GGCGCC 1 cut(s) 691
MlyI GAGTC 1 cut(s) 421
MmeI TCCRAC 2 cut(s) 575, 895
Mox20I TGGCCA 2 cut(s) 92, 481
Mph1103I ATGCAT 1 cut(s) 194
MroXI GAANNNNTTC 1 cut(s) 626
MscI TGGCCA 2 cut(s) 92, 481
MseI TTAA 1 cut(s) 861
MslI CAYNNNNRTG 3 cut(s) 335, 738, 806
Msp20I TGGCCA 2 cut(s) 92, 481
MspR9I CCNGG 1 cut(s) 89
MvaI CCWGG 1 cut(s) 89
MwoI GCNNNNNNNGC 3 cut(s) 198, 459, 977
NarI GGCGCC 1 cut(s) 691
NcoI CCATGG 2 cut(s) 246, 758
NdeI CATATG 1 cut(s) 786
NdeII GATC 3 cut(s) 352, 562, 749
NlaIII CATG 8 cut(s) 250, 370, 420, 529, 628, 722, 762, 908
NlaIV GGNNCC 2 cut(s) 692, 843
NmeAIII GCCGAG 1 cut(s) 631
NmuCI GTSAC 3 cut(s) 40, 583, 846
NsiI ATGCAT 1 cut(s) 194
NspI RCATGY 4 cut(s) 370, 529, 628, 908
PaqCI CACCTGC 1 cut(s) 667
PciI ACATGT 1 cut(s) 624
PciSI GCTCTTC 1 cut(s) 774
PcsI WCGNNNNNNNCGW 1 cut(s) 369
PdmI GAANNNNTTC 1 cut(s) 626
PfeI GAWTC 2 cut(s) 172, 179
PkrI GCNGC 2 cut(s) 745, 982
PleI GAGTC 1 cut(s) 421
PluTI GGCGCC 1 cut(s) 694
PpsI GAGTC 1 cut(s) 421
PpuMI RGGWCCY 1 cut(s) 841
PscI ACATGT 1 cut(s) 624
Psp5II RGGWCCY 1 cut(s) 841
Psp6I CCWGG 1 cut(s) 87
PspGI CCWGG 1 cut(s) 87
PspN4I GGNNCC 2 cut(s) 692, 843
PspPI GGNCC 4 cut(s) 33, 97, 841, 917
PspPPI RGGWCCY 1 cut(s) 841
PstI CTGCAG 1 cut(s) 13
RsaI GTAC 1 cut(s) 302
RsaNI GTAC 1 cut(s) 301
RseI CAYNNNNRTG 3 cut(s) 335, 738, 806
SapI GCTCTTC 1 cut(s) 774
SaqAI TTAA 1 cut(s) 861
SatI GCNGC 2 cut(s) 744, 981
Sau3AI GATC 3 cut(s) 352, 562, 749
Sau96I GGNCC 4 cut(s) 33, 97, 841, 917
SchI GAGTC 1 cut(s) 421
ScrFI CCNGG 1 cut(s) 89
SduI GDGCHC 4 cut(s) 165, 464, 497, 973
SfaNI GCATC 3 cut(s) 179, 798, 940
SfcI CTRYAG 1 cut(s) 9
SfoI GGCGCC 1 cut(s) 692
SinI GGWCC 2 cut(s) 841, 917
SmiMI CAYNNNNRTG 3 cut(s) 335, 738, 806
SmlI CTYRAG 1 cut(s) 183
SmoI CTYRAG 1 cut(s) 183
Sse9I AATT 3 cut(s) 239, 703, 882
SsiI CCGC 2 cut(s) 746, 981
SspDI GGCGCC 1 cut(s) 690
StyD4I CCNGG 1 cut(s) 87
StyI CCWWGG 3 cut(s) 93, 246, 758
TaaI ACNGT 3 cut(s) 560, 577, 740
TaqI TCGA 2 cut(s) 351, 363
TasI AATT 3 cut(s) 239, 703, 882
TauI GCSGC 1 cut(s) 983
TfiI GAWTC 2 cut(s) 172, 179
Tru1I TTAA 1 cut(s) 861
Tru9I TTAA 1 cut(s) 861
TscAI CASTG 2 cut(s) 464, 855
TseFI GTSAC 3 cut(s) 40, 583, 846
TseI GCWGC 1 cut(s) 743
Tsp45I GTSAC 3 cut(s) 40, 583, 846
TspDTI ATGAA 2 cut(s) 722, 894
TspRI CASTG 2 cut(s) 464, 855
VneI GTGCAC 1 cut(s) 969
VpaK11BI GGWCC 2 cut(s) 841, 917
XagI CCTNNNNNAGG 1 cut(s) 92
XapI RAATTY 1 cut(s) 703
XceI RCATGY 4 cut(s) 370, 529, 628, 908
XmiI GTMKAC 3 cut(s) 216, 642, 767
XmnI GAANNNNTTC 1 cut(s) 626
Zsp2I ATGCAT 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.