pycom13g12730

Belongs to the glycosyltransferase 8 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
8916779 .. 8918701
1923 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g12730.4

Sequence Viewer

Length: 984 bp
ATGTCCCCTGCAGAGACAAACGGTCCCAAGAGGGCCTTTGTGACCTTCTTGGCTGGCAATGGAGACTATTGGAAAGGTGTGGTTGGCCTTGCCAAGGGCCTAAGGAAGGCCAAATCTGCATATCCTCTTGTGGTGGCTGTCCTGCCTGATGTTCCTGAGGACCACCTTCAGATTCTTCACTCTCAAGGATGCATTGTTCATGCAATTGACCCTGTCTACCCTCCTGAAAACCAAACCCAATTTGCCATGGCTTATTATGTCATTAATTACTCCAAGCTTCGTATTTGGGAGTTTGTGGAGTATGAGAAGATGATATACTTGGATGGAGACATTCAAGTGTTTGAAAACATTGATCACCTTTTCGACATGCCCGAGGGCAATTTTTATGCTGTGATGGATTGCTTTTGTGAGAAGACATGGAGTGAATCTCCTCAGTACAAGATTGGGTACTGCCAGCAGTGCCCGGAGAAGGTGCAGTGGCCGGCCGAGTTGGGCTCACCACCACCACTTTACTTCAATGCCGGCATGTTTGTCTTTGAGCCTTGTGTTCTAACTTACCATGATCTGCTAGAGACCCTCCAAGTCACCCCTCCTTCCTTGTTCGCCGAGCAGGACTTTCTGAACATGTTCTTCAAGGACATATACAGTCCTATCCCACCTATATACAATCTTGTCTTGGCTATGTTGTGGCGCCACCCTGAGAATGTCGACCTTGACAAAGTGAAGGTTGTTCACTATTGTGCTGCGGGATCAAAGCCATGGAGGTACACAGGAAAGGAACAGCATATGGAGAGAGAGGACATCAAGATGCTGGTGAAGAAATGGTGGGACATTTATGATGACGCTTCACTGGATTACAAGAATGATGATGATGTGGATGATCGTGTGGTGAAGGATGACGAGCAAGTAAAGCTTCCACCCCTTATTTCCAGATTATCTGGGACTGACGTTGATGAGCAAATAAGTGCACCTTCTGCAGCTTGA

Protein Analysis

328

Amino Acids

37.6

Weight (kDa)

4.72

Isoelectric Point (pI)

39.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 690
AccI GTMKAC 2 cut(s) 216, 708
AciI CCGC 1 cut(s) 746
AclWI GGATC 1 cut(s) 757
AcoI YGGCCR 2 cut(s) 479, 483
AcuI CTGAAG 1 cut(s) 152
AcyI GRCGYC 1 cut(s) 691
AfaI GTAC 3 cut(s) 437, 449, 767
AfiI CCNNNNNNNGG 3 cut(s) 94, 106, 469
AflIII ACRYGT 1 cut(s) 624
AgsI TTSAA 4 cut(s) 335, 344, 517, 634
AhdI GACNNNNNGTC 1 cut(s) 21
AleI CACNNNNGTG 1 cut(s) 738
AloI GAACNNNNNNTCC 2 cut(s) 180, 212
AluBI AGCT 3 cut(s) 277, 913, 980
AluI AGCT 3 cut(s) 277, 913, 980
Alw21I GWGCWC 1 cut(s) 970
Alw26I GTCTC 4 cut(s) 8, 57, 321, 566
Alw44I GTGCAC 1 cut(s) 966
AlwI GGATC 1 cut(s) 757
Ama87I CYCGRG 1 cut(s) 371
AoxI GGCC 6 cut(s) 33, 85, 97, 108, 479, 483
ApaLI GTGCAC 1 cut(s) 966
ApeKI GCWGC 2 cut(s) 743, 977
AseI ATTAAT 1 cut(s) 264
Asp700I GAANNNNTTC 1 cut(s) 626
AspLEI GCGC 1 cut(s) 693
AspS9I GGNCC 4 cut(s) 23, 33, 97, 160
AsuC2I CCSGG 1 cut(s) 464
AsuHPI GGTGA 5 cut(s) 347, 489, 577, 826, 901
AvaI CYCGRG 1 cut(s) 371
AvaII GGWCC 2 cut(s) 23, 160
AxyI CCTNAGG 2 cut(s) 101, 156
BaeGI GKGCMC 2 cut(s) 464, 970
BanI GGYRCC 1 cut(s) 690
BanII GRGCYC 1 cut(s) 497
BarI GAAGNNNNNNTAC 2 cut(s) 299, 331
BbsI GAAGAC 1 cut(s) 419
Bbv12I GWGCWC 1 cut(s) 970
BbvI GCAGC 1 cut(s) 730
BccI CCATC 2 cut(s) 317, 388
BclI TGATCA 1 cut(s) 352
BcnI CCSGG 1 cut(s) 464
BcoDI GTCTC 4 cut(s) 8, 57, 321, 566
BfaI CTAG 1 cut(s) 569
BfmI CTRYAG 2 cut(s) 9, 975
BfoI RGCGCY 1 cut(s) 694
BisI GCNGC 2 cut(s) 744, 978
BlsI GCNGC 2 cut(s) 745, 979
Bme1390I CCNGG 1 cut(s) 464
Bme18I GGWCC 2 cut(s) 23, 160
BmeRI GACNNNNNGTC 1 cut(s) 21
BmeT110I CYCGRG 1 cut(s) 371
BmgT120I GGNCC 4 cut(s) 23, 33, 97, 160
BmiI GGNNCC 2 cut(s) 25, 692
BmrFI CCNGG 1 cut(s) 464
BmsI GCATC 2 cut(s) 179, 798
BpiI GAAGAC 1 cut(s) 419
BplI GAGNNNNNCTC 4 cut(s) 412, 444, 479, 511
BpuEI CTTGAG 1 cut(s) 168
BpuMI CCSGG 1 cut(s) 464
BsaHI GRCGYC 1 cut(s) 691
BsaI GGTCTC 1 cut(s) 566
BsaJI CCNNGG 4 cut(s) 93, 246, 372, 758
Bsc4I CCNNNNNNNGG 3 cut(s) 94, 106, 469
Bse118I RCCGGY 2 cut(s) 481, 521
Bse1I ACTGG 1 cut(s) 855
Bse21I CCTNAGG 2 cut(s) 101, 156
Bse3DI GCAATG 1 cut(s) 64
BseDI CCNNGG 4 cut(s) 93, 246, 372, 758
BseGI GGATG 4 cut(s) 194, 328, 883, 901
BseLI CCNNNNNNNGG 3 cut(s) 94, 106, 469
BseMI GCAATG 1 cut(s) 64
BseMII CTCAG 3 cut(s) 147, 446, 690
BseNI ACTGG 1 cut(s) 855
BseRI GAGGAG 1 cut(s) 420
BseSI GKGCMC 2 cut(s) 464, 970
BseX3I CGGCCG 1 cut(s) 483
BseXI GCAGC 1 cut(s) 730
BsgI GTGCAG 1 cut(s) 494
Bsh1285I CGRYCG 1 cut(s) 486
BshFI GGCC 6 cut(s) 35, 87, 99, 110, 481, 485
BshNI GGYRCC 1 cut(s) 690
BsiEI CGRYCG 1 cut(s) 486
BsiHKAI GWGCWC 1 cut(s) 970
BsiHKCI CYCGRG 1 cut(s) 371
BsiSI CCGG 3 cut(s) 464, 482, 522
BslFI GGGAC 3 cut(s) 9, 842, 955
BslI CCNNNNNNNGG 3 cut(s) 94, 106, 469
BsmAI GTCTC 4 cut(s) 8, 57, 321, 566
BsmFI GGGAC 3 cut(s) 9, 842, 955
BsnI GGCC 6 cut(s) 35, 87, 99, 110, 481, 485
Bso31I GGTCTC 1 cut(s) 566
BsoBI CYCGRG 1 cut(s) 371
Bsp1286I GDGCHC 3 cut(s) 464, 497, 970
Bsp143I GATC 4 cut(s) 352, 562, 749, 880
Bsp19I CCATGG 2 cut(s) 246, 758
BspACI CCGC 1 cut(s) 746
BspANI GGCC 6 cut(s) 35, 87, 99, 110, 481, 485
BspCNI CTCAG 3 cut(s) 148, 445, 691
BspLI GGNNCC 2 cut(s) 25, 692
BspMAI CTGCAG 2 cut(s) 13, 979
BspPI GGATC 1 cut(s) 757
BspT107I GGYRCC 1 cut(s) 690
BspTNI GGTCTC 1 cut(s) 566
BsrDI GCAATG 1 cut(s) 64
BsrFI RCCGGY 2 cut(s) 481, 521
BsrI ACTGG 1 cut(s) 855
BssAI RCCGGY 2 cut(s) 481, 521
BssECI CCNNGG 4 cut(s) 93, 246, 372, 758
BssMI GATC 4 cut(s) 352, 562, 749, 880
BssNI GRCGYC 1 cut(s) 691
BssT1I CCWWGG 3 cut(s) 93, 246, 758
Bst4CI ACNGT 2 cut(s) 23, 647
BstACI GRCGYC 1 cut(s) 691
BstAPI GCANNNNNTGC 1 cut(s) 974
BstC8I GCNNGC 4 cut(s) 55, 455, 483, 523
BstDEI CTNAG 4 cut(s) 101, 156, 432, 699
BstDSI CCRYGG 2 cut(s) 246, 758
BstENI CCTNNNNNAGG 2 cut(s) 92, 104
BstF5I GGATG 4 cut(s) 194, 328, 883, 901
BstH2I RGCGCY 1 cut(s) 694
BstHHI GCGC 1 cut(s) 693
BstKTI GATC 4 cut(s) 355, 565, 752, 883
BstMAI GTCTC 4 cut(s) 8, 57, 321, 566
BstMBI GATC 4 cut(s) 352, 562, 749, 880
BstMCI CGRYCG 1 cut(s) 486
BstMWI GCNNNNNNNGC 4 cut(s) 116, 459, 910, 974
BstNSI RCATGY 3 cut(s) 370, 529, 628
BstSCI CCNGG 1 cut(s) 462
BstSFI CTRYAG 2 cut(s) 9, 975
BstSLI GKGCMC 2 cut(s) 464, 970
BstV1I GCAGC 1 cut(s) 730
BstV2I GAAGAC 1 cut(s) 419
BstZI CGGCCG 1 cut(s) 483
Bsu36I CCTNAGG 2 cut(s) 101, 156
BsuRI GGCC 6 cut(s) 35, 87, 99, 110, 481, 485
BtgI CCRYGG 2 cut(s) 246, 758
BtsCI GGATG 4 cut(s) 194, 328, 883, 901
BtsI GCAGTG 2 cut(s) 464, 482
BtsIMutI CAGTG 3 cut(s) 464, 482, 848
Cac8I GCNNGC 4 cut(s) 55, 455, 483, 523
CfoI GCGC 1 cut(s) 693
Cfr10I RCCGGY 2 cut(s) 481, 521
Cfr13I GGNCC 4 cut(s) 23, 33, 97, 160
CseI GACGC 1 cut(s) 851
Csp6I GTAC 3 cut(s) 436, 448, 766
CviAII CATG 8 cut(s) 200, 247, 367, 417, 526, 560, 625, 759
CviQI GTAC 3 cut(s) 436, 448, 766
DdeI CTNAG 4 cut(s) 101, 156, 432, 699
DinI GGCGCC 1 cut(s) 692
DpnI GATC 4 cut(s) 354, 564, 751, 882
DpnII GATC 4 cut(s) 352, 562, 749, 880
DriI GACNNNNNGTC 1 cut(s) 21
EaeI YGGCCR 2 cut(s) 479, 483
EagI CGGCCG 1 cut(s) 483
Eam1105I GACNNNNNGTC 1 cut(s) 21
EclXI CGGCCG 1 cut(s) 483
Eco130I CCWWGG 3 cut(s) 93, 246, 758
Eco24I GRGCYC 1 cut(s) 497
Eco31I GGTCTC 1 cut(s) 566
Eco47I GGWCC 2 cut(s) 23, 160
Eco52I CGGCCG 1 cut(s) 483
Eco57I CTGAAG 1 cut(s) 152
Eco81I CCTNAGG 2 cut(s) 101, 156
Eco88I CYCGRG 1 cut(s) 371
EcoNI CCTNNNNNAGG 2 cut(s) 92, 104
EcoO109I RGGNCCY 2 cut(s) 33, 97
EcoT14I CCWWGG 3 cut(s) 93, 246, 758
EcoT22I ATGCAT 1 cut(s) 194
EcoT38I GRGCYC 1 cut(s) 497
EgeI GGCGCC 1 cut(s) 692
EheI GGCGCC 1 cut(s) 692
ErhI CCWWGG 3 cut(s) 93, 246, 758
FaeI CATG 8 cut(s) 203, 250, 370, 420, 529, 563, 628, 762
FalI AAGNNNNNCTT 5 cut(s) 20, 52, 897, 929, 955
FaqI GGGAC 3 cut(s) 9, 842, 955
FatI CATG 8 cut(s) 199, 246, 366, 416, 525, 559, 624, 758
FauI CCCGC 1 cut(s) 739
FauNDI CATATG 1 cut(s) 786
FbaI TGATCA 1 cut(s) 352
FblI GTMKAC 2 cut(s) 216, 708
Fnu4HI GCNGC 2 cut(s) 744, 978
FokI GGATG 4 cut(s) 201, 335, 890, 908
FriOI GRGCYC 1 cut(s) 497
FseI GGCCGGCC 1 cut(s) 485
Fsp4HI GCNGC 2 cut(s) 744, 978
FspBI CTAG 1 cut(s) 569
GlaI GCGC 1 cut(s) 692
GluI GCNGC 2 cut(s) 744, 978
HaeII RGCGCY 1 cut(s) 694
HaeIII GGCC 6 cut(s) 35, 87, 99, 110, 481, 485
HapII CCGG 3 cut(s) 464, 482, 522
HgaI GACGC 1 cut(s) 851
HhaI GCGC 1 cut(s) 693
Hin1I GRCGYC 1 cut(s) 691
Hin1II CATG 8 cut(s) 203, 250, 370, 420, 529, 563, 628, 762
Hin6I GCGC 1 cut(s) 691
HinP1I GCGC 1 cut(s) 691
HincII GTYRAC 1 cut(s) 709
HindII GTYRAC 1 cut(s) 709
HindIII AAGCTT 2 cut(s) 275, 911
HinfI GANTC 2 cut(s) 172, 425
HpaII CCGG 3 cut(s) 464, 482, 522
HphI GGTGA 5 cut(s) 347, 489, 577, 826, 901
Hpy166II GTNNAC 5 cut(s) 217, 709, 733, 768, 968
Hpy188I TCNGA 2 cut(s) 171, 621
Hpy188III TCNNGA 4 cut(s) 155, 224, 805, 930
Hpy8I GTNNAC 5 cut(s) 217, 709, 733, 768, 968
HpyAV CCTTC 8 cut(s) 55, 100, 176, 463, 603, 718, 886, 981
HpyCH4III ACNGT 2 cut(s) 23, 647
HpyCH4IV ACGT 1 cut(s) 948
HpyCH4V TGCA 7 cut(s) 11, 119, 192, 203, 475, 968, 977
HpyF10VI GCNNNNNNNGC 4 cut(s) 116, 459, 910, 974
HpyF3I CTNAG 4 cut(s) 101, 156, 432, 699
HpySE526I ACGT 1 cut(s) 948
Hsp92I GRCGYC 1 cut(s) 691
Hsp92II CATG 8 cut(s) 203, 250, 370, 420, 529, 563, 628, 762
HspAI GCGC 1 cut(s) 691
KasI GGCGCC 1 cut(s) 690
KroI GCCGGC 2 cut(s) 481, 521
KroNI GCCGGC 2 cut(s) 483, 523
Ksp22I TGATCA 1 cut(s) 352
Kzo9I GATC 4 cut(s) 352, 562, 749, 880
Lsp1109I GCAGC 1 cut(s) 730
LweI GCATC 2 cut(s) 179, 798
MaeI CTAG 1 cut(s) 569
MaeII ACGT 1 cut(s) 948
MaeIII GTNAC 2 cut(s) 40, 583
MalI GATC 4 cut(s) 354, 564, 751, 882
MboI GATC 4 cut(s) 352, 562, 749, 880
MboII GAAGA 5 cut(s) 167, 319, 424, 622, 829
MfeI CAATTG 1 cut(s) 204
MhlI GDGCHC 3 cut(s) 464, 497, 970
MluCI AATT 4 cut(s) 204, 239, 265, 379
Mly113I GGCGCC 1 cut(s) 691
Mph1103I ATGCAT 1 cut(s) 194
MroNI GCCGGC 2 cut(s) 481, 521
MroXI GAANNNNTTC 1 cut(s) 626
MseI TTAA 1 cut(s) 264
MslI CAYNNNNRTG 3 cut(s) 335, 738, 806
MspI CCGG 3 cut(s) 464, 482, 522
MspR9I CCNGG 1 cut(s) 464
MunI CAATTG 1 cut(s) 204
MwoI GCNNNNNNNGC 4 cut(s) 116, 459, 910, 974
NaeI GCCGGC 2 cut(s) 483, 523
NarI GGCGCC 1 cut(s) 691
NciI CCSGG 1 cut(s) 464
NcoI CCATGG 2 cut(s) 246, 758
NdeI CATATG 1 cut(s) 786
NdeII GATC 4 cut(s) 352, 562, 749, 880
NgoMIV GCCGGC 2 cut(s) 481, 521
NlaIII CATG 8 cut(s) 203, 250, 370, 420, 529, 563, 628, 762
NlaIV GGNNCC 2 cut(s) 25, 692
NmeAIII GCCGAG 2 cut(s) 511, 631
NmuCI GTSAC 2 cut(s) 40, 583
NsiI ATGCAT 1 cut(s) 194
NspI RCATGY 3 cut(s) 370, 529, 628
OliI CACNNNNGTG 1 cut(s) 738
PciI ACATGT 1 cut(s) 624
PcsI WCGNNNNNNNCGW 1 cut(s) 369
PdiI GCCGGC 2 cut(s) 483, 523
PdmI GAANNNNTTC 1 cut(s) 626
PfeI GAWTC 2 cut(s) 172, 425
PflFI GACNNNGTC 1 cut(s) 212
PkrI GCNGC 2 cut(s) 745, 979
PluTI GGCGCC 1 cut(s) 694
PscI ACATGT 1 cut(s) 624
PshBI ATTAAT 1 cut(s) 264
PspN4I GGNNCC 2 cut(s) 25, 692
PspPI GGNCC 4 cut(s) 23, 33, 97, 160
PstI CTGCAG 2 cut(s) 13, 979
PsyI GACNNNGTC 1 cut(s) 212
RigI GGCCGGCC 1 cut(s) 485
RsaI GTAC 3 cut(s) 437, 449, 767
RsaNI GTAC 3 cut(s) 436, 448, 766
RseI CAYNNNNRTG 3 cut(s) 335, 738, 806
SalI GTCGAC 1 cut(s) 707
SaqAI TTAA 1 cut(s) 264
SatI GCNGC 2 cut(s) 744, 978
Sau3AI GATC 4 cut(s) 352, 562, 749, 880
Sau96I GGNCC 4 cut(s) 23, 33, 97, 160
ScrFI CCNGG 1 cut(s) 464
SduI GDGCHC 3 cut(s) 464, 497, 970
SfaNI GCATC 2 cut(s) 179, 798
SfcI CTRYAG 2 cut(s) 9, 975
SfoI GGCGCC 1 cut(s) 692
SinI GGWCC 2 cut(s) 23, 160
SmiMI CAYNNNNRTG 3 cut(s) 335, 738, 806
SmlI CTYRAG 1 cut(s) 183
SmoI CTYRAG 1 cut(s) 183
Sse9I AATT 4 cut(s) 204, 239, 265, 379
SsiI CCGC 1 cut(s) 746
SspDI GGCGCC 1 cut(s) 690
SspMI CTAG 1 cut(s) 569
StyD4I CCNGG 1 cut(s) 462
StyI CCWWGG 3 cut(s) 93, 246, 758
TaaI ACNGT 2 cut(s) 23, 647
TaiI ACGT 1 cut(s) 951
TaqI TCGA 2 cut(s) 363, 708
TasI AATT 4 cut(s) 204, 239, 265, 379
TatI WGTACW 1 cut(s) 435
TfiI GAWTC 2 cut(s) 172, 425
Tru1I TTAA 1 cut(s) 264
Tru9I TTAA 1 cut(s) 264
TscAI CASTG 3 cut(s) 464, 482, 855
TseFI GTSAC 2 cut(s) 40, 583
TseI GCWGC 2 cut(s) 743, 977
Tsp45I GTSAC 2 cut(s) 40, 583
TspDTI ATGAA 1 cut(s) 188
TspRI CASTG 3 cut(s) 464, 482, 855
Tth111I GACNNNGTC 1 cut(s) 212
VneI GTGCAC 1 cut(s) 966
VpaK11BI GGWCC 2 cut(s) 23, 160
VspI ATTAAT 1 cut(s) 264
XagI CCTNNNNNAGG 2 cut(s) 92, 104
XceI RCATGY 3 cut(s) 370, 529, 628
XmiI GTMKAC 2 cut(s) 216, 708
XmnI GAANNNNTTC 1 cut(s) 626
XspI CTAG 1 cut(s) 569
Zsp2I ATGCAT 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.