Prupe.1G265600_v2.0.a1

Belongs to the thioredoxin family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0002536
Physical Location & Seq
Reverse (-)
27364144 .. 27365208
1065 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G265600.1

Sequence Viewer

Length: 393 bp
ATGGGAGGCAACTTATCACACATTCAAGACTACTCCGATGATGATTCATCACGCGGAAAGAAGTCTCGCATCATGGCCTTCCATTCCAAGGACCAATGGAACACTCACTTCAATGCCTCCAAAGAAAGCAACAAACTGATGGTGATAGATTTCACGGCAACATGGTGTGGACCTTGTCGAGCCATGGAGCCAACATTGAAGGAGTATGCTGATAAATACACAGACGTTGAGTTTATCAAGCTGGATGTAGACGAGTTACCGGATGTGGCTAGGGAGTTCGGGGTGCAGGCAATGCCTTCATTTGTTTTTGTGAAGAAAGGGGACGTGGTTGATAAGGTCGTGGGGGCCAGGAAGGAGGAACTCCAGAAGAAGATTGAGAAACACAGGAAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04621 ko05418 map04621 map05418
Pfam Domains
Protein Families
Thioredoxin

Protein Analysis

131

Amino Acids

14.92

Weight (kDa)

6.9

Isoelectric Point (pI)

27.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 249
AccII CGCG 1 cut(s) 54
AciI CCGC 1 cut(s) 54
AfiI CCNNNNNNNGG 1 cut(s) 88
AgsI TTSAA 3 cut(s) 26, 112, 199
AjiI CACGTC 1 cut(s) 325
AjnI CCWGG 1 cut(s) 347
AluBI AGCT 1 cut(s) 241
AluI AGCT 1 cut(s) 241
Alw26I GTCTC 1 cut(s) 69
AoxI GGCC 2 cut(s) 75, 345
AspS9I GGNCC 3 cut(s) 91, 170, 345
AsuHPI GGTGA 1 cut(s) 154
AvaII GGWCC 2 cut(s) 91, 170
BccI CCATC 1 cut(s) 133
BceAI ACGGC 1 cut(s) 171
BciT130I CCWGG 1 cut(s) 349
BcoDI GTCTC 1 cut(s) 69
BfaI CTAG 1 cut(s) 270
Bme1390I CCNGG 1 cut(s) 349
Bme18I GGWCC 2 cut(s) 91, 170
BmgBI CACGTC 1 cut(s) 325
BmgT120I GGNCC 3 cut(s) 91, 170, 345
BmiI GGNNCC 2 cut(s) 189, 346
BmrFI CCNGG 1 cut(s) 349
BmsI GCATC 1 cut(s) 78
BpmI CTGGAG 1 cut(s) 347
BsaJI CCNNGG 2 cut(s) 87, 183
BsaWI WCCGGW 1 cut(s) 259
Bsc4I CCNNNNNNNGG 1 cut(s) 88
Bse3DI GCAATG 1 cut(s) 297
BseBI CCWGG 1 cut(s) 349
BseDI CCNNGG 2 cut(s) 87, 183
BseGI GGATG 2 cut(s) 250, 268
BseLI CCNNNNNNNGG 1 cut(s) 88
BseMI GCAATG 1 cut(s) 297
BsgI GTGCAG 1 cut(s) 305
Bsh1236I CGCG 1 cut(s) 54
BshFI GGCC 2 cut(s) 77, 347
BsiSI CCGG 1 cut(s) 260
BslFI GGGAC 1 cut(s) 335
BslI CCNNNNNNNGG 1 cut(s) 88
BsmAI GTCTC 1 cut(s) 69
BsmFI GGGAC 1 cut(s) 335
BsnI GGCC 2 cut(s) 77, 347
Bsp19I CCATGG 1 cut(s) 183
BspACI CCGC 1 cut(s) 54
BspANI GGCC 2 cut(s) 77, 347
BspFNI CGCG 1 cut(s) 54
BspLI GGNNCC 2 cut(s) 189, 346
BsrDI GCAATG 1 cut(s) 297
BssECI CCNNGG 2 cut(s) 87, 183
BssT1I CCWWGG 2 cut(s) 87, 183
Bst2UI CCWGG 1 cut(s) 349
BstAPI GCANNNNNTGC 1 cut(s) 292
BstC8I GCNNGC 1 cut(s) 288
BstDSI CCRYGG 1 cut(s) 183
BstF5I GGATG 2 cut(s) 250, 268
BstFNI CGCG 1 cut(s) 54
BstMAI GTCTC 1 cut(s) 69
BstMWI GCNNNNNNNGC 1 cut(s) 292
BstNI CCWGG 1 cut(s) 349
BstSCI CCNGG 1 cut(s) 347
BstUI CGCG 1 cut(s) 54
BsuRI GGCC 2 cut(s) 77, 347
BtgI CCRYGG 1 cut(s) 183
BtrI CACGTC 1 cut(s) 325
BtsCI GGATG 2 cut(s) 250, 268
Cac8I GCNNGC 1 cut(s) 288
Cfr13I GGNCC 3 cut(s) 91, 170, 345
CviAII CATG 3 cut(s) 73, 162, 184
CviJI RGCY 6 cut(s) 77, 182, 190, 241, 269, 347
CviKI_1 RGCY 6 cut(s) 77, 182, 190, 241, 269, 347
Eco130I CCWWGG 2 cut(s) 87, 183
Eco47I GGWCC 2 cut(s) 91, 170
EcoRII CCWGG 1 cut(s) 347
EcoT14I CCWWGG 2 cut(s) 87, 183
ErhI CCWWGG 2 cut(s) 87, 183
FaeI CATG 3 cut(s) 76, 165, 187
FaiI YATR 4 cut(s) 74, 163, 185, 207
FaqI GGGAC 1 cut(s) 335
FatI CATG 3 cut(s) 72, 161, 183
FblI GTMKAC 1 cut(s) 249
FokI GGATG 2 cut(s) 257, 275
FspBI CTAG 1 cut(s) 270
GsuI CTGGAG 1 cut(s) 347
HaeIII GGCC 2 cut(s) 77, 347
HapII CCGG 1 cut(s) 260
Hin1II CATG 3 cut(s) 76, 165, 187
HinfI GANTC 1 cut(s) 44
HpaII CCGG 1 cut(s) 260
HphI GGTGA 1 cut(s) 154
Hpy166II GTNNAC 2 cut(s) 170, 250
Hpy188I TCNGA 1 cut(s) 37
Hpy188III TCNNGA 2 cut(s) 26, 364
Hpy8I GTNNAC 2 cut(s) 170, 250
HpyAV CCTTC 4 cut(s) 88, 193, 306, 346
HpyCH4IV ACGT 2 cut(s) 225, 324
HpyCH4V TGCA 1 cut(s) 286
HpyF10VI GCNNNNNNNGC 1 cut(s) 292
HpySE526I ACGT 2 cut(s) 225, 324
Hsp92II CATG 3 cut(s) 76, 165, 187
LmnI GCTCC 1 cut(s) 187
LpnPI CCDG 7 cut(s) 227, 272, 273, 334, 361, 370, 377
LweI GCATC 1 cut(s) 78
MaeI CTAG 1 cut(s) 270
MaeII ACGT 2 cut(s) 225, 324
MaeIII GTNAC 1 cut(s) 255
MboII GAAGA 3 cut(s) 325, 379, 382
MnlI CCTC 2 cut(s) 127, 349
MslI CAYNNNNRTG 1 cut(s) 111
MspI CCGG 1 cut(s) 260
MspR9I CCNGG 1 cut(s) 349
MvaI CCWGG 1 cut(s) 349
MvnI CGCG 1 cut(s) 54
MwoI GCNNNNNNNGC 1 cut(s) 292
NcoI CCATGG 1 cut(s) 183
NlaIII CATG 3 cut(s) 76, 165, 187
NlaIV GGNNCC 2 cut(s) 189, 346
PfeI GAWTC 1 cut(s) 44
PflFI GACNNNGTC 1 cut(s) 174
Psp6I CCWGG 1 cut(s) 347
PspGI CCWGG 1 cut(s) 347
PspN4I GGNNCC 2 cut(s) 189, 346
PspPI GGNCC 3 cut(s) 91, 170, 345
PsyI GACNNNGTC 1 cut(s) 174
RseI CAYNNNNRTG 1 cut(s) 111
Sau96I GGNCC 3 cut(s) 91, 170, 345
ScrFI CCNGG 1 cut(s) 349
SetI ASST 5 cut(s) 175, 228, 243, 327, 339
SfaNI GCATC 1 cut(s) 78
SinI GGWCC 2 cut(s) 91, 170
SmiMI CAYNNNNRTG 1 cut(s) 111
SsiI CCGC 1 cut(s) 54
SspMI CTAG 1 cut(s) 270
StyD4I CCNGG 1 cut(s) 347
StyI CCWWGG 2 cut(s) 87, 183
TaiI ACGT 2 cut(s) 228, 327
TaqI TCGA 1 cut(s) 178
TfiI GAWTC 1 cut(s) 44
TspDTI ATGAA 2 cut(s) 36, 288
Tth111I GACNNNGTC 1 cut(s) 174
VpaK11BI GGWCC 2 cut(s) 91, 170
XmiI GTMKAC 1 cut(s) 249
XspI CTAG 1 cut(s) 270
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.