60s ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25210 AT4G31985 |
| malus_domestica | MD02G1011500.v1.1 MD08G1060200.v1.1 MD15G1036400.v1.1 MD15G1157300.v1.1 |
| prunus_persica | Prupe.1G390600_v2.0.a1 Prupe.7G258200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0086361 |
| rosa_laevigata | RLG00000015752 RLG00000024908 RLG00000027179 RLG00000032785 RLG00000035324 |
| rosa_roxburghii | Rroxscaffold_1G00005040 Rroxscaffold_2G00154670 Rroxscaffold_3G00251010 |
| rosa_rugosa | Rorug01G0466800 Rorug06G0368500.1 |
| rosa_samantha | Rh1CG058200 Rh1CG281600 Rh2AG017000 Rh2DG193700 Rh3AG170400 Rh3BG149800 Rh3CG186800 Rh6BG489500 Rh6CG495000 Rh6DG480300 Rh7AG287500 Rh7CG307200 |
| rosa_wichuraiana | Rw2G001440 Rw7G017270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 132 |
| AciI | CCGC | 1 cut(s) | 136 |
| AclWI | GGATC | 2 cut(s) | 73, 86 |
| AcyI | GRCGYC | 1 cut(s) | 133 |
| AfaI | GTAC | 1 cut(s) | 110 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 123 |
| AjuI | GAANNNNNNNTTGG | 1 cut(s) | 134 |
| AluBI | AGCT | 2 cut(s) | 37, 145 |
| AluI | AGCT | 2 cut(s) | 37, 145 |
| AlwI | GGATC | 2 cut(s) | 73, 86 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 129 |
| AoxI | GGCC | 1 cut(s) | 62 |
| AspLEI | GCGC | 2 cut(s) | 123, 135 |
| AspS9I | GGNCC | 2 cut(s) | 63, 90 |
| AvaII | GGWCC | 1 cut(s) | 90 |
| BamHI | GGATCC | 1 cut(s) | 78 |
| BanI | GGYRCC | 1 cut(s) | 132 |
| BccI | CCATC | 2 cut(s) | 74, 110 |
| BcgI | CGANNNNNNTGC | 1 cut(s) | 127 |
| BfoI | RGCGCY | 1 cut(s) | 136 |
| BisI | GCNGC | 1 cut(s) | 136 |
| BlsI | GCNGC | 1 cut(s) | 137 |
| Bme18I | GGWCC | 1 cut(s) | 90 |
| BmgT120I | GGNCC | 2 cut(s) | 63, 90 |
| BmiI | GGNNCC | 2 cut(s) | 80, 134 |
| BsaHI | GRCGYC | 1 cut(s) | 133 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 123 |
| Bse1I | ACTGG | 1 cut(s) | 134 |
| BseGI | GGATG | 1 cut(s) | 66 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 123 |
| BseNI | ACTGG | 1 cut(s) | 134 |
| BshFI | GGCC | 1 cut(s) | 64 |
| BshNI | GGYRCC | 1 cut(s) | 132 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 123 |
| BsnI | GGCC | 1 cut(s) | 64 |
| Bsp143I | GATC | 1 cut(s) | 78 |
| BspACI | CCGC | 1 cut(s) | 136 |
| BspANI | GGCC | 1 cut(s) | 64 |
| BspLI | GGNNCC | 2 cut(s) | 80, 134 |
| BspPI | GGATC | 2 cut(s) | 73, 86 |
| BspT107I | GGYRCC | 1 cut(s) | 132 |
| BsrI | ACTGG | 1 cut(s) | 134 |
| BssMI | GATC | 1 cut(s) | 78 |
| BssNI | GRCGYC | 1 cut(s) | 133 |
| BstACI | GRCGYC | 1 cut(s) | 133 |
| BstC8I | GCNNGC | 2 cut(s) | 39, 125 |
| BstF5I | GGATG | 1 cut(s) | 66 |
| BstH2I | RGCGCY | 1 cut(s) | 136 |
| BstHHI | GCGC | 2 cut(s) | 123, 135 |
| BstKTI | GATC | 1 cut(s) | 81 |
| BstMBI | GATC | 1 cut(s) | 78 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 61 |
| BstX2I | RGATCY | 1 cut(s) | 78 |
| BstYI | RGATCY | 1 cut(s) | 78 |
| BsuRI | GGCC | 1 cut(s) | 64 |
| BtsCI | GGATG | 1 cut(s) | 66 |
| BtsIMutI | CAGTG | 1 cut(s) | 127 |
| Cac8I | GCNNGC | 2 cut(s) | 39, 125 |
| CaiI | CAGNNNCTG | 1 cut(s) | 129 |
| CfoI | GCGC | 2 cut(s) | 123, 135 |
| Cfr13I | GGNCC | 2 cut(s) | 63, 90 |
| Csp6I | GTAC | 1 cut(s) | 109 |
| CviJI | RGCY | 3 cut(s) | 37, 64, 145 |
| CviKI_1 | RGCY | 3 cut(s) | 37, 64, 145 |
| CviQI | GTAC | 1 cut(s) | 109 |
| DinI | GGCGCC | 1 cut(s) | 134 |
| DpnI | GATC | 1 cut(s) | 80 |
| DpnII | GATC | 1 cut(s) | 78 |
| Eco47I | GGWCC | 1 cut(s) | 90 |
| EgeI | GGCGCC | 1 cut(s) | 134 |
| EheI | GGCGCC | 1 cut(s) | 134 |
| FaiI | YATR | 1 cut(s) | 23 |
| Fnu4HI | GCNGC | 1 cut(s) | 136 |
| FokI | GGATG | 1 cut(s) | 53 |
| Fsp4HI | GCNGC | 1 cut(s) | 136 |
| GlaI | GCGC | 2 cut(s) | 122, 134 |
| GluI | GCNGC | 1 cut(s) | 136 |
| HaeII | RGCGCY | 1 cut(s) | 136 |
| HaeIII | GGCC | 1 cut(s) | 64 |
| HhaI | GCGC | 2 cut(s) | 123, 135 |
| Hin1I | GRCGYC | 1 cut(s) | 133 |
| Hin6I | GCGC | 2 cut(s) | 121, 133 |
| HinP1I | GCGC | 2 cut(s) | 121, 133 |
| Hpy188I | TCNGA | 1 cut(s) | 155 |
| Hpy188III | TCNNGA | 1 cut(s) | 28 |
| HpyAV | CCTTC | 1 cut(s) | 28 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 61 |
| Hsp92I | GRCGYC | 1 cut(s) | 133 |
| HspAI | GCGC | 2 cut(s) | 121, 133 |
| KasI | GGCGCC | 1 cut(s) | 132 |
| Kzo9I | GATC | 1 cut(s) | 78 |
| LpnPI | CCDG | 5 cut(s) | 23, 46, 91, 109, 115 |
| MalI | GATC | 1 cut(s) | 80 |
| MboI | GATC | 1 cut(s) | 78 |
| MboII | GAAGA | 3 cut(s) | 43, 55, 58 |
| MflI | RGATCY | 1 cut(s) | 78 |
| Mly113I | GGCGCC | 1 cut(s) | 133 |
| MnlI | CCTC | 3 cut(s) | 45, 81, 81 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 61 |
| NarI | GGCGCC | 1 cut(s) | 133 |
| NdeII | GATC | 1 cut(s) | 78 |
| NlaIV | GGNNCC | 2 cut(s) | 80, 134 |
| PkrI | GCNGC | 1 cut(s) | 137 |
| PluTI | GGCGCC | 1 cut(s) | 136 |
| PspN4I | GGNNCC | 2 cut(s) | 80, 134 |
| PspPI | GGNCC | 2 cut(s) | 63, 90 |
| PstNI | CAGNNNCTG | 1 cut(s) | 129 |
| PsuI | RGATCY | 1 cut(s) | 78 |
| RsaI | GTAC | 1 cut(s) | 110 |
| RsaNI | GTAC | 1 cut(s) | 109 |
| SatI | GCNGC | 1 cut(s) | 136 |
| Sau3AI | GATC | 1 cut(s) | 78 |
| Sau96I | GGNCC | 2 cut(s) | 63, 90 |
| SetI | ASST | 4 cut(s) | 20, 39, 110, 147 |
| SfoI | GGCGCC | 1 cut(s) | 134 |
| SgeI | CNNG | 8 cut(s) | 25, 40, 50, 73, 118, 130, 136, 142 |
| SinI | GGWCC | 1 cut(s) | 90 |
| SsiI | CCGC | 1 cut(s) | 136 |
| SspDI | GGCGCC | 1 cut(s) | 132 |
| TaqII | GACCGA | 1 cut(s) | 107 |
| TauI | GCSGC | 1 cut(s) | 138 |
| TscAI | CASTG | 1 cut(s) | 134 |
| TspDTI | ATGAA | 1 cut(s) | 10 |
| TspGWI | ACGGA | 1 cut(s) | 71 |
| TspRI | CASTG | 1 cut(s) | 134 |
| VpaK11BI | GGWCC | 1 cut(s) | 90 |