60S ribosomal protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G25210 AT4G31985 |
| malus_domestica | MD02G1011500.v1.1 MD08G1060200.v1.1 MD15G1036400.v1.1 MD15G1157300.v1.1 |
| prunus_persica | Prupe.1G390600_v2.0.a1 Prupe.7G258200_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr2g0086361 |
| rosa_laevigata | RLG00000015752 RLG00000024908 RLG00000027179 RLG00000032785 RLG00000035324 |
| rosa_roxburghii | Rroxscaffold_1G00005040 Rroxscaffold_2G00154670 Rroxscaffold_3G00251010 |
| rosa_rugosa | Rorug01G0466800 Rorug06G0368500.1 |
| rosa_samantha | Rh1CG058200 Rh1CG281600 Rh2AG017000 Rh2DG193700 Rh3AG170400 Rh3BG149800 Rh3CG186800 Rh6BG489500 Rh6CG495000 Rh6DG480300 Rh7AG287500 Rh7CG307200 |
| rosa_wichuraiana | Rw2G001440 Rw7G017270 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 132 |
| AciI | CCGC | 1 cut(s) | 82 |
| AclWI | GGATC | 3 cut(s) | 32, 73, 86 |
| AcuI | CTGAAG | 1 cut(s) | 4 |
| AcyI | GRCGYC | 1 cut(s) | 133 |
| AfaI | GTAC | 2 cut(s) | 110, 139 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 147 |
| AluBI | AGCT | 2 cut(s) | 37, 145 |
| AluI | AGCT | 2 cut(s) | 37, 145 |
| AlwI | GGATC | 3 cut(s) | 32, 73, 86 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 129 |
| Ama87I | CYCGRG | 1 cut(s) | 146 |
| AspLEI | GCGC | 2 cut(s) | 123, 135 |
| AspS9I | GGNCC | 1 cut(s) | 90 |
| AvaI | CYCGRG | 1 cut(s) | 146 |
| AvaII | GGWCC | 1 cut(s) | 90 |
| BamHI | GGATCC | 1 cut(s) | 78 |
| BanI | GGYRCC | 1 cut(s) | 132 |
| BccI | CCATC | 1 cut(s) | 110 |
| BceAI | ACGGC | 1 cut(s) | 120 |
| BfoI | RGCGCY | 1 cut(s) | 136 |
| BlpI | GCTNAGC | 1 cut(s) | 117 |
| Bme18I | GGWCC | 1 cut(s) | 90 |
| BmeT110I | CYCGRG | 1 cut(s) | 146 |
| BmgT120I | GGNCC | 1 cut(s) | 90 |
| BmiI | GGNNCC | 2 cut(s) | 80, 134 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 117 |
| BsaHI | GRCGYC | 1 cut(s) | 133 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 147 |
| Bse1I | ACTGG | 2 cut(s) | 80, 134 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 147 |
| BseNI | ACTGG | 2 cut(s) | 80, 134 |
| BshNI | GGYRCC | 1 cut(s) | 132 |
| BsiHKCI | CYCGRG | 1 cut(s) | 146 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 147 |
| BsoBI | CYCGRG | 1 cut(s) | 146 |
| Bsp143I | GATC | 2 cut(s) | 24, 78 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 117 |
| BspACI | CCGC | 1 cut(s) | 82 |
| BspLI | GGNNCC | 2 cut(s) | 80, 134 |
| BspPI | GGATC | 3 cut(s) | 32, 73, 86 |
| BspT107I | GGYRCC | 1 cut(s) | 132 |
| BsrI | ACTGG | 2 cut(s) | 80, 134 |
| BssMI | GATC | 2 cut(s) | 24, 78 |
| BssNI | GRCGYC | 1 cut(s) | 133 |
| BstACI | GRCGYC | 1 cut(s) | 133 |
| BstC8I | GCNNGC | 2 cut(s) | 39, 125 |
| BstDEI | CTNAG | 1 cut(s) | 117 |
| BstH2I | RGCGCY | 1 cut(s) | 136 |
| BstHHI | GCGC | 2 cut(s) | 123, 135 |
| BstKTI | GATC | 2 cut(s) | 27, 81 |
| BstMBI | GATC | 2 cut(s) | 24, 78 |
| BstX2I | RGATCY | 1 cut(s) | 78 |
| BstYI | RGATCY | 1 cut(s) | 78 |
| BtsIMutI | CAGTG | 2 cut(s) | 73, 127 |
| Cac8I | GCNNGC | 2 cut(s) | 39, 125 |
| CaiI | CAGNNNCTG | 1 cut(s) | 129 |
| CfoI | GCGC | 2 cut(s) | 123, 135 |
| Cfr13I | GGNCC | 1 cut(s) | 90 |
| Csp6I | GTAC | 2 cut(s) | 109, 138 |
| CviAII | CATG | 1 cut(s) | 85 |
| CviJI | RGCY | 2 cut(s) | 37, 145 |
| CviKI_1 | RGCY | 2 cut(s) | 37, 145 |
| CviQI | GTAC | 2 cut(s) | 109, 138 |
| DdeI | CTNAG | 1 cut(s) | 117 |
| DinI | GGCGCC | 1 cut(s) | 134 |
| DpnI | GATC | 2 cut(s) | 26, 80 |
| DpnII | GATC | 2 cut(s) | 24, 78 |
| Eco47I | GGWCC | 1 cut(s) | 90 |
| Eco57I | CTGAAG | 1 cut(s) | 4 |
| Eco88I | CYCGRG | 1 cut(s) | 146 |
| EgeI | GGCGCC | 1 cut(s) | 134 |
| EheI | GGCGCC | 1 cut(s) | 134 |
| FaeI | CATG | 1 cut(s) | 88 |
| FaiI | YATR | 1 cut(s) | 86 |
| FatI | CATG | 1 cut(s) | 84 |
| GlaI | GCGC | 2 cut(s) | 122, 134 |
| HaeII | RGCGCY | 1 cut(s) | 136 |
| HhaI | GCGC | 2 cut(s) | 123, 135 |
| Hin1I | GRCGYC | 1 cut(s) | 133 |
| Hin1II | CATG | 1 cut(s) | 88 |
| Hin6I | GCGC | 2 cut(s) | 121, 133 |
| HinP1I | GCGC | 2 cut(s) | 121, 133 |
| Hpy188III | TCNNGA | 2 cut(s) | 22, 28 |
| Hpy99I | CGWCG | 1 cut(s) | 10 |
| HpyAV | CCTTC | 1 cut(s) | 28 |
| HpyF3I | CTNAG | 1 cut(s) | 117 |
| Hsp92I | GRCGYC | 1 cut(s) | 133 |
| Hsp92II | CATG | 1 cut(s) | 88 |
| HspAI | GCGC | 2 cut(s) | 121, 133 |
| KasI | GGCGCC | 1 cut(s) | 132 |
| Kzo9I | GATC | 2 cut(s) | 24, 78 |
| LpnPI | CCDG | 6 cut(s) | 7, 23, 61, 91, 109, 115 |
| MalI | GATC | 2 cut(s) | 26, 80 |
| MboI | GATC | 2 cut(s) | 24, 78 |
| MboII | GAAGA | 3 cut(s) | 43, 55, 58 |
| MflI | RGATCY | 1 cut(s) | 78 |
| Mly113I | GGCGCC | 1 cut(s) | 133 |
| MnlI | CCTC | 3 cut(s) | 45, 81, 81 |
| NarI | GGCGCC | 1 cut(s) | 133 |
| NdeII | GATC | 2 cut(s) | 24, 78 |
| NlaIII | CATG | 1 cut(s) | 88 |
| NlaIV | GGNNCC | 2 cut(s) | 80, 134 |
| PluTI | GGCGCC | 1 cut(s) | 136 |
| PspN4I | GGNNCC | 2 cut(s) | 80, 134 |
| PspPI | GGNCC | 1 cut(s) | 90 |
| PstNI | CAGNNNCTG | 1 cut(s) | 129 |
| PsuI | RGATCY | 1 cut(s) | 78 |
| RsaI | GTAC | 2 cut(s) | 110, 139 |
| RsaNI | GTAC | 2 cut(s) | 109, 138 |
| Sau3AI | GATC | 2 cut(s) | 24, 78 |
| Sau96I | GGNCC | 1 cut(s) | 90 |
| SetI | ASST | 4 cut(s) | 20, 39, 110, 147 |
| SfoI | GGCGCC | 1 cut(s) | 134 |
| SgeI | CNNG | 9 cut(s) | 25, 34, 40, 50, 88, 97, 118, 136, 142 |
| SinI | GGWCC | 1 cut(s) | 90 |
| SsiI | CCGC | 1 cut(s) | 82 |
| SspDI | GGCGCC | 1 cut(s) | 132 |
| TaqII | GACCGA | 1 cut(s) | 107 |
| TscAI | CASTG | 2 cut(s) | 80, 134 |
| TspRI | CASTG | 2 cut(s) | 80, 134 |
| VpaK11BI | GGWCC | 1 cut(s) | 90 |