Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002707

Physical Location & Seq

Genomic Coordinates Forward (+)

36604235 .. 36608060

Gene Structure 3826 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G425000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1002 bp

ATGTCCAGGGCTCGAGTCTACGCAGACATCAACGTCCACCGCCCTAGAGATTACTGGGATTACGAATCTCTCACGCTTCAGTGGGGTGATCAAGATGACTACGAGGTTGTTCGGAAGGTTGGCAGAGGAAAATACAGTGAGGTCTTTGAAGGTGTAAATGTCACCAACAATGAAAAATGCGTTATCAAGATCCTTAAACCCGTCAAGAAAAAGAAGATAAAGAGGGAAATAAAGATACTACAGAATCTTTGTGGAGGTCCAAATATTGTGAAGCTGCTTGATATTGTCCGGGATGACCACTCAAAAACTCCTAGCTTGATCTTTGAATATGTGAACAGTGCAGATTTCAAAGTGTTGTACCCCACACTGACAGATTACGACATTCGCTACTATATATATGAACTTCTCAAGGCATTGGATTACTGCCATTCGCAGGGCATAATACATCGAGATGTCAAACCTCACAATGTTATGATCGATCATGAGCTGCGAAAACTTCGCTTGATTGATTGGGGTCTCGCTGAATTCTACCATCCTGGCAAAGAGTACAATGTCCGAGTAGCTTCAAGGCACTATAAGGGGCCTGAACTCCTTGTTGATTTGCAAGACTATGACTATTCTTTAGACTTGTGGAGCCTTGGATGTATGTTTGCAGGAATGATCTTTCGGAAGGAACAATTCTTCTACGGTCATGACAATCATGACCAGCTAGTGAAAATTGCTAAGGTTCTTGGAACGGACGAATTACATGCATATTTGAATAAATATCACCTTGTCCTTGATCCTCAGCTCGATGCTCTTGTTGGAAGGCACAGCAGGAAACCGTGGTCAAGATTTATCAATGTGGATAATCAACATCTGGTTTCTCCAGAGGCCATTGATTTTCTAGATAAGCTTCTTCGATATGATCACCAGGAAAGGCTTACAGCAGGAGAAGCAATGGCACATCCATATTTCTCCCAAGTGAGAAGTGCAGAAAATAGCCGGATGCGGACTCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0008150 GO:0031974 GO:0031981 GO:0042752 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044464 GO:0050789 GO:0065007 GO:0070013

KEGG Pathways

Metabolic & Signaling

ko03008 ko04064 ko04137 ko04139 ko04310 ko04520 ko04712 ko05162 ko05168 ko05169 map03008 map04064 map04137 map04139 map04310 map04520 map04712 map05162 map05168 map05169

Pfam Domains

Protein Families

Pkinase

Protein Analysis

334

Amino Acids

39.29

Weight (kDa)

7.73

Isoelectric Point (pI)

31.92

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002707)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g33300 FvH4_2g33300 FvH4_2g33300 FvH4_2g33300 FvH4_2g33300
malus_domestica	MD08G1087400.v1.1 MD15G1072400.v1.1 MD15G1314700.v1.1
prunus_persica	Prupe.1G425000_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0357221 RchiOBHm_Chr1g0362391 RchiOBHm_Chr2g0131551 RchiOBHm_Chr6g0309321
rosa_laevigata	RLG00000009840 RLG00000010574 RLG00000021364 RLG00000031506
rosa_multiflora	Rmu_sc0003576.1_g000007 Rmu_sc0015692.1_g000002
rosa_roxburghii	Rroxscaffold_3G00228160 Rroxscaffold_6G00412270 Rroxscaffold_7G00159490
rosa_rugosa	Rorug01G0255000 Rorug05G0444500 Rorug05G0444500 Rorug06G0371000
rosa_samantha	Rh2BG357900 Rh5AG062100 Rh5AG134700 Rh5BG310400 Rh5DG320900 Rh6AG235600 Rh6AG484400 Rh6BG493500 Rh6CG498300 Rh6DG484800
rosa_wichuraiana	Rw6G028820 Rw6G042170 Rw7G020100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	32
AccI	GTMKAC	1 cut(s)	18
AciI	CCGC	2 cut(s)	40, 991
AclWI	GGATC	2 cut(s)	184, 776
AcsI	RAATTY	1 cut(s)	524
AcuI	CTGAAG	1 cut(s)	62
AfaI	GTAC	2 cut(s)	359, 548
AfiI	CCNNNNNNNGG	1 cut(s)	433
AgsI	TTSAA	5 cut(s)	149, 326, 349, 567, 760
AjnI	CCWGG	3 cut(s)	5, 535, 912
AluBI	AGCT	7 cut(s)	274, 315, 487, 563, 709, 790, 895
AluI	AGCT	7 cut(s)	274, 315, 487, 563, 709, 790, 895
Alw26I	GTCTC	1 cut(s)	521
AlwI	GGATC	2 cut(s)	184, 776
Ama87I	CYCGRG	1 cut(s)	12
AoxI	GGCC	2 cut(s)	581, 873
ApeKI	GCWGC	2 cut(s)	274, 487
ApoI	RAATTY	1 cut(s)	524
AspS9I	GGNCC	2 cut(s)	257, 581
AsuC2I	CCSGG	1 cut(s)	290
AsuHPI	GGTGA	4 cut(s)	98, 154, 761, 902
AvaI	CYCGRG	1 cut(s)	12
AvaII	GGWCC	1 cut(s)	257
BanII	GRGCYC	1 cut(s)	13
BbvCI	CCTCAGC	1 cut(s)	786
BbvI	GCAGC	2 cut(s)	261, 474
BccI	CCATC	1 cut(s)	540
BcgI	CGANNNNNNTGC	2 cut(s)	731, 765
BciT130I	CCWGG	3 cut(s)	7, 537, 914
BclI	TGATCA	2 cut(s)	88, 907
BcnI	CCSGG	1 cut(s)	290
BcoDI	GTCTC	1 cut(s)	521
BfaI	CTAG	4 cut(s)	45, 312, 710, 887
BfmI	CTRYAG	1 cut(s)	239
BisI	GCNGC	2 cut(s)	275, 488
BlsI	GCNGC	2 cut(s)	276, 489
Bme1390I	CCNGG	4 cut(s)	7, 290, 537, 914
Bme18I	GGWCC	1 cut(s)	257
BmeT110I	CYCGRG	1 cut(s)	12
BmgT120I	GGNCC	2 cut(s)	257, 581
BmiI	GGNNCC	2 cut(s)	582, 635
BmrFI	CCNGG	4 cut(s)	7, 290, 537, 914
BmrI	ACTGGG	1 cut(s)	64
BmsI	GCATC	2 cut(s)	784, 978
BmuI	ACTGGG	1 cut(s)	64
BpmI	CTGGAG	1 cut(s)	852
Bpu10I	CCTNAGC	2 cut(s)	723, 786
BpuEI	CTTGAG	1 cut(s)	392
BpuMI	CCSGG	1 cut(s)	290
Bsa29I	ATCGAT	1 cut(s)	477
BsaI	GGTCTC	1 cut(s)	521
BsaJI	CCNNGG	3 cut(s)	6, 637, 824
Bsc4I	CCNNNNNNNGG	1 cut(s)	433
Bse1I	ACTGG	1 cut(s)	59
Bse3DI	GCAATG	1 cut(s)	945
BseBI	CCWGG	3 cut(s)	7, 537, 914
BseCI	ATCGAT	1 cut(s)	477
BseDI	CCNNGG	3 cut(s)	6, 637, 824
BseGI	GGATG	5 cut(s)	298, 532, 647, 946, 993
BseLI	CCNNNNNNNGG	1 cut(s)	433
BseMI	GCAATG	1 cut(s)	945
BseMII	CTCAG	1 cut(s)	800
BseNI	ACTGG	1 cut(s)	59
BseXI	GCAGC	2 cut(s)	261, 474
BsgI	GTGCAG	2 cut(s)	360, 993
BshFI	GGCC	2 cut(s)	583, 875
BshVI	ATCGAT	1 cut(s)	477
BsiHKCI	CYCGRG	1 cut(s)	12
BsiSI	CCGG	2 cut(s)	289, 985
BslI	CCNNNNNNNGG	1 cut(s)	433
BsmAI	GTCTC	1 cut(s)	521
BsnI	GGCC	2 cut(s)	583, 875
Bso31I	GGTCTC	1 cut(s)	521
BsoBI	CYCGRG	1 cut(s)	12
Bsp1286I	GDGCHC	1 cut(s)	13
Bsp143I	GATC	8 cut(s)	88, 189, 318, 474, 478, 660, 781, 907
BspACI	CCGC	2 cut(s)	40, 991
BspANI	GGCC	2 cut(s)	583, 875
BspCNI	CTCAG	1 cut(s)	799
BspDI	ATCGAT	1 cut(s)	477
BspHI	TCATGA	3 cut(s)	481, 691, 700
BspLI	GGNNCC	2 cut(s)	582, 635
BspPI	GGATC	2 cut(s)	184, 776
BspTNI	GGTCTC	1 cut(s)	521
BsrDI	GCAATG	1 cut(s)	945
BsrI	ACTGG	1 cut(s)	59
BssECI	CCNNGG	3 cut(s)	6, 637, 824
BssMI	GATC	8 cut(s)	88, 189, 318, 474, 478, 660, 781, 907
BssT1I	CCWWGG	1 cut(s)	637
Bst2UI	CCWGG	3 cut(s)	7, 537, 914
Bst4CI	ACNGT	4 cut(s)	137, 338, 689, 825
BstDEI	CTNAG	3 cut(s)	723, 786, 996
BstDSI	CCRYGG	1 cut(s)	824
BstF5I	GGATG	5 cut(s)	298, 532, 647, 946, 993
BstKTI	GATC	8 cut(s)	91, 192, 321, 477, 481, 663, 784, 910
BstMAI	GTCTC	1 cut(s)	521
BstMBI	GATC	8 cut(s)	88, 189, 318, 474, 478, 660, 781, 907
BstMWI	GCNNNNNNNGC	1 cut(s)	935
BstNI	CCWGG	3 cut(s)	7, 537, 914
BstNSI	RCATGY	1 cut(s)	752
BstSCI	CCNGG	4 cut(s)	5, 288, 535, 912
BstSFI	CTRYAG	1 cut(s)	239
BstV1I	GCAGC	2 cut(s)	261, 474
BstX2I	RGATCY	1 cut(s)	189
BstYI	RGATCY	1 cut(s)	189
Bsu15I	ATCGAT	1 cut(s)	477
BsuRI	GGCC	2 cut(s)	583, 875
BsuTUI	ATCGAT	1 cut(s)	477
BtgI	CCRYGG	1 cut(s)	824
BtsCI	GGATG	5 cut(s)	298, 532, 647, 946, 993
BtsIMutI	CAGTG	4 cut(s)	86, 142, 343, 365
CciI	TCATGA	3 cut(s)	481, 691, 700
Cfr13I	GGNCC	2 cut(s)	257, 581
ClaI	ATCGAT	1 cut(s)	477
Csp6I	GTAC	2 cut(s)	358, 547
CviAII	CATG	4 cut(s)	482, 692, 701, 749
CviQI	GTAC	2 cut(s)	358, 547
DdeI	CTNAG	3 cut(s)	723, 786, 996
DpnI	GATC	8 cut(s)	90, 191, 320, 476, 480, 662, 783, 909
DpnII	GATC	8 cut(s)	88, 189, 318, 474, 478, 660, 781, 907
DrdI	GACNNNNNNGTC	1 cut(s)	32
DseDI	GACNNNNNNGTC	1 cut(s)	32
Eco130I	CCWWGG	1 cut(s)	637
Eco24I	GRGCYC	1 cut(s)	13
Eco31I	GGTCTC	1 cut(s)	521
Eco47I	GGWCC	1 cut(s)	257
Eco57I	CTGAAG	1 cut(s)	62
Eco88I	CYCGRG	1 cut(s)	12
EcoO109I	RGGNCCY	1 cut(s)	581
EcoRI	GAATTC	1 cut(s)	524
EcoRII	CCWGG	3 cut(s)	5, 535, 912
EcoT14I	CCWWGG	1 cut(s)	637
EcoT22I	ATGCAT	1 cut(s)	754
EcoT38I	GRGCYC	1 cut(s)	13
ErhI	CCWWGG	1 cut(s)	637
FaeI	CATG	4 cut(s)	485, 695, 704, 752
FatI	CATG	4 cut(s)	481, 691, 700, 748
FbaI	TGATCA	2 cut(s)	88, 907
FblI	GTMKAC	1 cut(s)	18
Fnu4HI	GCNGC	2 cut(s)	275, 488
FokI	GGATG	4 cut(s)	305, 519, 654, 933
FriOI	GRGCYC	1 cut(s)	13
Fsp4HI	GCNGC	2 cut(s)	275, 488
FspBI	CTAG	4 cut(s)	45, 312, 710, 887
GluI	GCNGC	2 cut(s)	275, 488
GsuI	CTGGAG	1 cut(s)	852
HaeIII	GGCC	2 cut(s)	583, 875
HapII	CCGG	2 cut(s)	289, 985
Hin1II	CATG	4 cut(s)	485, 695, 704, 752
HindIII	AAGCTT	1 cut(s)	893
HinfI	GANTC	4 cut(s)	15, 65, 244, 994
HpaII	CCGG	2 cut(s)	289, 985
HphI	GGTGA	4 cut(s)	98, 154, 761, 902
Hpy166II	GTNNAC	3 cut(s)	19, 37, 334
Hpy188I	TCNGA	3 cut(s)	114, 557, 669
Hpy8I	GTNNAC	3 cut(s)	19, 37, 334
HpyAV	CCTTC	4 cut(s)	109, 143, 664, 801
HpyCH4III	ACNGT	4 cut(s)	137, 338, 689, 825
HpyCH4IV	ACGT	1 cut(s)	33
HpyCH4V	TGCA	5 cut(s)	341, 604, 653, 752, 974
HpyF10VI	GCNNNNNNNGC	1 cut(s)	935
HpyF3I	CTNAG	3 cut(s)	723, 786, 996
HpySE526I	ACGT	1 cut(s)	33
Hsp92II	CATG	4 cut(s)	485, 695, 704, 752
Ksp22I	TGATCA	2 cut(s)	88, 907
Kzo9I	GATC	8 cut(s)	88, 189, 318, 474, 478, 660, 781, 907
LmnI	GCTCC	1 cut(s)	633
Lsp1109I	GCAGC	2 cut(s)	261, 474
LweI	GCATC	2 cut(s)	784, 978
MaeI	CTAG	4 cut(s)	45, 312, 710, 887
MaeII	ACGT	1 cut(s)	33
MaeIII	GTNAC	1 cut(s)	160
MalI	GATC	8 cut(s)	90, 191, 320, 476, 480, 662, 783, 909
MboI	GATC	8 cut(s)	88, 189, 318, 474, 478, 660, 781, 907
MboII	GAAGA	3 cut(s)	226, 673, 890
MflI	RGATCY	1 cut(s)	189
MhlI	GDGCHC	1 cut(s)	13
MluCI	AATT	4 cut(s)	524, 677, 717, 743
MlyI	GAGTC	2 cut(s)	24, 988
MmeI	TCCRAC	1 cut(s)	784
MnlI	CCTC	8 cut(s)	97, 119, 133, 216, 248, 471, 795, 865
Mph1103I	ATGCAT	1 cut(s)	754
MseI	TTAA	1 cut(s)	195
MslI	CAYNNNNRTG	1 cut(s)	450
MspI	CCGG	2 cut(s)	289, 985
MspR9I	CCNGG	4 cut(s)	7, 290, 537, 914
MvaI	CCWGG	3 cut(s)	7, 537, 914
MwoI	GCNNNNNNNGC	1 cut(s)	935
NciI	CCSGG	1 cut(s)	290
NdeII	GATC	8 cut(s)	88, 189, 318, 474, 478, 660, 781, 907
NlaIII	CATG	4 cut(s)	485, 695, 704, 752
NlaIV	GGNNCC	2 cut(s)	582, 635
NmuCI	GTSAC	1 cut(s)	160
NsiI	ATGCAT	1 cut(s)	754
NspI	RCATGY	1 cut(s)	752
PaeR7I	CTCGAG	1 cut(s)	12
PagI	TCATGA	3 cut(s)	481, 691, 700
PfeI	GAWTC	2 cut(s)	65, 244
PfoI	TCCNGGA	1 cut(s)	288
PkrI	GCNGC	2 cut(s)	276, 489
PleI	GAGTC	2 cut(s)	23, 988
PpsI	GAGTC	2 cut(s)	23, 988
Psp6I	CCWGG	3 cut(s)	5, 535, 912
PspGI	CCWGG	3 cut(s)	5, 535, 912
PspN4I	GGNNCC	2 cut(s)	582, 635
PspPI	GGNCC	2 cut(s)	257, 581
PspXI	VCTCGAGB	1 cut(s)	12
PsuI	RGATCY	1 cut(s)	189
RsaI	GTAC	2 cut(s)	359, 548
RsaNI	GTAC	2 cut(s)	358, 547
RseI	CAYNNNNRTG	1 cut(s)	450
SaqAI	TTAA	1 cut(s)	195
SatI	GCNGC	2 cut(s)	275, 488
Sau3AI	GATC	8 cut(s)	88, 189, 318, 474, 478, 660, 781, 907
Sau96I	GGNCC	2 cut(s)	257, 581
SchI	GAGTC	2 cut(s)	24, 988
ScrFI	CCNGG	4 cut(s)	7, 290, 537, 914
SduI	GDGCHC	1 cut(s)	13
SfaNI	GCATC	2 cut(s)	784, 978
SfcI	CTRYAG	1 cut(s)	239
Sfr274I	CTCGAG	1 cut(s)	12
SinI	GGWCC	1 cut(s)	257
SlaI	CTCGAG	1 cut(s)	12
SmiMI	CAYNNNNRTG	1 cut(s)	450
SmlI	CTYRAG	2 cut(s)	12, 407
SmoI	CTYRAG	2 cut(s)	12, 407
Sse9I	AATT	4 cut(s)	524, 677, 717, 743
SsiI	CCGC	2 cut(s)	40, 991
SspI	AATATT	1 cut(s)	265
SspMI	CTAG	4 cut(s)	45, 312, 710, 887
StyD4I	CCNGG	4 cut(s)	5, 288, 535, 912
StyI	CCWWGG	1 cut(s)	637
TaaI	ACNGT	4 cut(s)	137, 338, 689, 825
TaiI	ACGT	1 cut(s)	36
TaqI	TCGA	5 cut(s)	13, 448, 477, 792, 901
TasI	AATT	4 cut(s)	524, 677, 717, 743
TatI	WGTACW	1 cut(s)	546
TfiI	GAWTC	2 cut(s)	65, 244
Tru1I	TTAA	1 cut(s)	195
Tru9I	TTAA	1 cut(s)	195
TscAI	CASTG	4 cut(s)	86, 142, 343, 372
TseFI	GTSAC	1 cut(s)	160
TseI	GCWGC	2 cut(s)	274, 487
Tsp45I	GTSAC	1 cut(s)	160
TspDTI	ATGAA	2 cut(s)	186, 414
TspGWI	ACGGA	1 cut(s)	752
TspRI	CASTG	4 cut(s)	86, 142, 343, 372
VpaK11BI	GGWCC	1 cut(s)	257
XapI	RAATTY	1 cut(s)	524
XbaI	TCTAGA	1 cut(s)	886
XceI	RCATGY	1 cut(s)	752
XhoI	CTCGAG	1 cut(s)	12
XmiI	GTMKAC	1 cut(s)	18
XspI	CTAG	4 cut(s)	45, 312, 710, 887
Zsp2I	ATGCAT	1 cut(s)	754

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.