Rmu_sc0015692.1_g000002
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0015692.1
Physical Location & Seq
Forward (+)
3953 .. 9803
5851 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0015692.1_g000002.1.cds

Sequence Viewer

Length: 1341 bp
atggagactttacacggttgtggttcgtcgaggccacaacgggcgtgccttaaagatggtgatgtgagtcatgctaggtctttgccaactctattgcatttggcggcacgatgggacttgcaaatcgattcggatttgaggggctctctagatcgatcgatggacatctcttccttgtttgatttcttccaagctatgtcagtggcacggaagttcgacacaagaggggttggtgcttgggtgcccacttacttggatgtccagagcattccatatagggcaacgtgggttttgccgccatcctccaccggaatcttcaaagaatcaaggtcaaatccggtagccatgtccagggctcgagtctacgccgacgtcaacgttcagcgccccagagattactgggattacgaatctttcgtccttcaatggggtgttcaagatgaatatgaggttgttcggaaggttggaagaggaaagtacagtgaggtcttcgagggtataaatgtcaccaacaatgaaaaatgcgtgatcaagatccttaaaccagtcaagaaaaagaagattaaaagggagataaaaatattacagaatctttgtggaggtccaaatgttgtgaagctgcttgatattgtcagggatgagctctcaaaaactcctagtttaatctttgaacatgtcaacagtacagatttcaaagtgttgtaccccacactgacagattacgacattcgctactatatatatgaacttctcaaggcattggattactgtcattcccagggcataatgcatcgagatgtgaagcctcacaacgttatgattgatcacgagttgcggaaacttcgcctgattgattggggtcttgctgaattctaccatcctggcaaagaatacaacgtccgagtagcttcaaggcactataaagggcctgagctccttgttgatttgcaagactatgactattcattagacatgtggagccttggctgtatgtttgcaggaatgatctttcgcaaggaacaattcttttatggtcatgacaatcaggaccagctagtgaaaatcgctaaggttcttggaacagacgagttacatgcatacttgactaaatatcatcttgtgcttgaacctcagcttgaggctcttgttggaagtcacagcaggaagccatggcaaagatttattactccagacaatcggcatcttgtttcttcagaggccatcgattttctagacaagcttcttcgatatgatcatcaggacaggcttactgcaagagaagcaatggcacatccatacttctcagaagtgagaagcgcagaaattagccggatgcagtaa

Protein Analysis

446

Amino Acids

51.89

Weight (kDa)

8.07

Isoelectric Point (pI)

38.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 375
AccB1I GGYRCC 1 cut(s) 241
AccI GTMKAC 1 cut(s) 363
AciI CCGC 3 cut(s) 104, 296, 835
AclI AACGTT 2 cut(s) 378, 813
AclWI GGATC 1 cut(s) 529
AcsI RAATTY 1 cut(s) 869
AcuI CTGAAG 1 cut(s) 1197
AcyI GRCGYC 1 cut(s) 372
AfaI GTAC 3 cut(s) 479, 685, 704
AfiI CCNNNNNNNGG 2 cut(s) 351, 427
AflIII ACRYGT 2 cut(s) 673, 972
AgsI TTSAA 7 cut(s) 319, 425, 437, 671, 694, 912, 1127
AjnI CCWGG 3 cut(s) 350, 777, 880
AleI CACNNNNGTG 1 cut(s) 18
AluBI AGCT 8 cut(s) 194, 619, 643, 908, 934, 1054, 1135, 1240
AluI AGCT 8 cut(s) 194, 619, 643, 908, 934, 1054, 1135, 1240
Alw21I GWGCWC 2 cut(s) 645, 936
AlwI GGATC 1 cut(s) 529
Ama87I CYCGRG 1 cut(s) 357
AoxI GGCC 3 cut(s) 32, 926, 1218
ApeKI GCWGC 1 cut(s) 619
ApoI RAATTY 1 cut(s) 869
ArsI GACNNNNNNTTYG 2 cut(s) 402, 434
AspLEI GCGC 2 cut(s) 387, 1319
AspS9I GGNCC 3 cut(s) 602, 926, 1048
AsuHPI GGTGA 2 cut(s) 71, 499
AvaI CYCGRG 1 cut(s) 357
AvaII GGWCC 2 cut(s) 602, 1048
BaeGI GKGCMC 1 cut(s) 246
BanI GGYRCC 1 cut(s) 241
BanII GRGCYC 4 cut(s) 146, 358, 645, 936
BauI CACGAG 1 cut(s) 827
BbsI GAAGAC 1 cut(s) 481
Bbv12I GWGCWC 2 cut(s) 645, 936
BbvCI CCTCAGC 1 cut(s) 1131
BbvI GCAGC 1 cut(s) 606
BccI CCATC 6 cut(s) 50, 105, 154, 307, 885, 1229
BcgI CGANNNNNNTGC 2 cut(s) 1076, 1110
BciT130I CCWGG 3 cut(s) 352, 779, 882
BclI TGATCA 3 cut(s) 528, 823, 1252
BfaI CTAG 5 cut(s) 75, 149, 657, 1055, 1232
BfoI RGCGCY 1 cut(s) 388
BisI GCNGC 3 cut(s) 105, 296, 620
BlsI GCNGC 3 cut(s) 106, 297, 621
Bme1390I CCNGG 3 cut(s) 352, 779, 882
Bme18I GGWCC 2 cut(s) 602, 1048
BmeT110I CYCGRG 1 cut(s) 357
BmgT120I GGNCC 3 cut(s) 602, 926, 1048
BmiI GGNNCC 2 cut(s) 243, 980
BmrFI CCNGG 3 cut(s) 352, 779, 882
BmrI ACTGGG 1 cut(s) 409
BmsI GCATC 3 cut(s) 799, 1210, 1323
BmuI ACTGGG 1 cut(s) 409
BpiI GAAGAC 1 cut(s) 481
BplI GAGNNNNNCTC 2 cut(s) 130, 162
BpmI CTGGAG 1 cut(s) 1173
Bpu10I CCTNAGC 3 cut(s) 930, 1068, 1131
BpuEI CTTGAG 2 cut(s) 737, 1157
Bsa29I ATCGAT 4 cut(s) 126, 154, 158, 1224
BsaBI GATNNNNATC 2 cut(s) 164, 533
BsaHI GRCGYC 1 cut(s) 372
BsaJI CCNNGG 5 cut(s) 351, 777, 778, 982, 1169
BsaWI WCCGGW 2 cut(s) 308, 337
Bsc4I CCNNNNNNNGG 2 cut(s) 351, 427
Bse1I ACTGG 2 cut(s) 404, 545
Bse3DI GCAATG 1 cut(s) 1290
Bse8I GATNNNNATC 2 cut(s) 164, 533
BseBI CCWGG 3 cut(s) 352, 779, 882
BseCI ATCGAT 4 cut(s) 126, 154, 158, 1224
BseDI CCNNGG 5 cut(s) 351, 777, 778, 982, 1169
BseGI GGATG 6 cut(s) 262, 299, 643, 877, 1291, 1338
BseJI GATNNNNATC 2 cut(s) 164, 533
BseLI CCNNNNNNNGG 2 cut(s) 351, 427
BseMI GCAATG 1 cut(s) 1290
BseMII CTCAG 3 cut(s) 921, 1145, 1317
BseNI ACTGG 2 cut(s) 404, 545
BseSI GKGCMC 1 cut(s) 246
BseXI GCAGC 1 cut(s) 606
Bsh1285I CGRYCG 1 cut(s) 158
BshFI GGCC 3 cut(s) 34, 928, 1220
BshNI GGYRCC 1 cut(s) 241
BshVI ATCGAT 4 cut(s) 126, 154, 158, 1224
BsiEI CGRYCG 1 cut(s) 158
BsiHKAI GWGCWC 2 cut(s) 645, 936
BsiHKCI CYCGRG 1 cut(s) 357
BsiSI CCGG 3 cut(s) 309, 338, 1330
BslFI GGGAC 1 cut(s) 128
BslI CCNNNNNNNGG 2 cut(s) 351, 427
BsmFI GGGAC 1 cut(s) 128
BsmI GAATGC 1 cut(s) 267
BsnI GGCC 3 cut(s) 34, 928, 1220
BsoBI CYCGRG 1 cut(s) 357
Bsp1286I GDGCHC 5 cut(s) 146, 246, 358, 645, 936
Bsp143I GATC 7 cut(s) 151, 155, 528, 534, 823, 1005, 1252
Bsp19I CCATGG 1 cut(s) 1169
BspACI CCGC 3 cut(s) 104, 296, 835
BspANI GGCC 3 cut(s) 34, 928, 1220
BspCNI CTCAG 3 cut(s) 922, 1144, 1316
BspDI ATCGAT 4 cut(s) 126, 154, 158, 1224
BspHI TCATGA 1 cut(s) 1036
BspLI GGNNCC 2 cut(s) 243, 980
BspPI GGATC 1 cut(s) 529
BspT107I GGYRCC 1 cut(s) 241
BsrDI GCAATG 1 cut(s) 1290
BsrI ACTGG 2 cut(s) 404, 545
BssECI CCNNGG 5 cut(s) 351, 777, 778, 982, 1169
BssMI GATC 7 cut(s) 151, 155, 528, 534, 823, 1005, 1252
BssNI GRCGYC 1 cut(s) 372
BssSI CACGAG 1 cut(s) 827
BssT1I CCWWGG 2 cut(s) 982, 1169
Bst2BI CACGAG 1 cut(s) 827
Bst2UI CCWGG 3 cut(s) 352, 779, 882
Bst4CI ACNGT 4 cut(s) 17, 482, 683, 770
Bst6I CTCTTC 2 cut(s) 175, 463
BstACI GRCGYC 1 cut(s) 372
BstC8I GCNNGC 1 cut(s) 46
BstDEI CTNAG 4 cut(s) 930, 1068, 1131, 1303
BstDSI CCRYGG 1 cut(s) 1169
BstF5I GGATG 6 cut(s) 262, 299, 643, 877, 1291, 1338
BstH2I RGCGCY 1 cut(s) 388
BstHHI GCGC 2 cut(s) 387, 1319
BstKTI GATC 7 cut(s) 154, 158, 531, 537, 826, 1008, 1255
BstMBI GATC 7 cut(s) 151, 155, 528, 534, 823, 1005, 1252
BstMCI CGRYCG 1 cut(s) 158
BstMWI GCNNNNNNNGC 1 cut(s) 1280
BstNI CCWGG 3 cut(s) 352, 779, 882
BstNSI RCATGY 3 cut(s) 677, 976, 1097
BstSCI CCNGG 3 cut(s) 350, 777, 880
BstSLI GKGCMC 1 cut(s) 246
BstV1I GCAGC 1 cut(s) 606
BstV2I GAAGAC 1 cut(s) 481
BstX2I RGATCY 1 cut(s) 534
BstXI CCANNNNNNTGG 1 cut(s) 253
BstYI RGATCY 1 cut(s) 534
Bsu15I ATCGAT 4 cut(s) 126, 154, 158, 1224
BsuRI GGCC 3 cut(s) 34, 928, 1220
BsuTUI ATCGAT 4 cut(s) 126, 154, 158, 1224
BtgI CCRYGG 1 cut(s) 1169
BtsCI GGATG 6 cut(s) 262, 299, 643, 877, 1291, 1338
BtsIMutI CAGTG 3 cut(s) 207, 487, 710
Cac8I GCNNGC 1 cut(s) 46
CciI TCATGA 1 cut(s) 1036
CfoI GCGC 2 cut(s) 387, 1319
Cfr13I GGNCC 3 cut(s) 602, 926, 1048
ClaI ATCGAT 4 cut(s) 126, 154, 158, 1224
Csp6I GTAC 3 cut(s) 478, 684, 703
CviAII CATG 7 cut(s) 71, 346, 674, 973, 1037, 1094, 1170
CviQI GTAC 3 cut(s) 478, 684, 703
DdeI CTNAG 4 cut(s) 930, 1068, 1131, 1303
DpnI GATC 7 cut(s) 153, 157, 530, 536, 825, 1007, 1254
DpnII GATC 7 cut(s) 151, 155, 528, 534, 823, 1005, 1252
Eam1104I CTCTTC 2 cut(s) 175, 463
EarI CTCTTC 2 cut(s) 175, 463
Ecl136II GAGCTC 2 cut(s) 643, 934
Eco130I CCWWGG 2 cut(s) 982, 1169
Eco24I GRGCYC 4 cut(s) 146, 358, 645, 936
Eco47I GGWCC 2 cut(s) 602, 1048
Eco53kI GAGCTC 2 cut(s) 643, 934
Eco57I CTGAAG 1 cut(s) 1197
Eco88I CYCGRG 1 cut(s) 357
EcoICRI GAGCTC 2 cut(s) 643, 934
EcoO109I RGGNCCY 1 cut(s) 926
EcoRI GAATTC 1 cut(s) 869
EcoRII CCWGG 3 cut(s) 350, 777, 880
EcoT14I CCWWGG 2 cut(s) 982, 1169
EcoT22I ATGCAT 2 cut(s) 792, 1099
EcoT38I GRGCYC 4 cut(s) 146, 358, 645, 936
ErhI CCWWGG 2 cut(s) 982, 1169
FaeI CATG 7 cut(s) 74, 349, 677, 976, 1040, 1097, 1173
FaqI GGGAC 1 cut(s) 128
FatI CATG 7 cut(s) 70, 345, 673, 972, 1036, 1093, 1169
FbaI TGATCA 3 cut(s) 528, 823, 1252
FblI GTMKAC 1 cut(s) 363
Fnu4HI GCNGC 3 cut(s) 105, 296, 620
FokI GGATG 5 cut(s) 269, 286, 650, 864, 1278
FriOI GRGCYC 4 cut(s) 146, 358, 645, 936
Fsp4HI GCNGC 3 cut(s) 105, 296, 620
FspBI CTAG 5 cut(s) 75, 149, 657, 1055, 1232
GlaI GCGC 2 cut(s) 386, 1318
GluI GCNGC 3 cut(s) 105, 296, 620
GsuI CTGGAG 1 cut(s) 1173
HaeII RGCGCY 1 cut(s) 388
HaeIII GGCC 3 cut(s) 34, 928, 1220
HapII CCGG 3 cut(s) 309, 338, 1330
HhaI GCGC 2 cut(s) 387, 1319
Hin1I GRCGYC 1 cut(s) 372
Hin1II CATG 7 cut(s) 74, 349, 677, 976, 1040, 1097, 1173
Hin6I GCGC 2 cut(s) 385, 1317
HinP1I GCGC 2 cut(s) 385, 1317
HincII GTYRAC 2 cut(s) 376, 679
HindII GTYRAC 2 cut(s) 376, 679
HindIII AAGCTT 1 cut(s) 1238
HinfI GANTC 7 cut(s) 67, 128, 312, 323, 360, 410, 589
HpaII CCGG 3 cut(s) 309, 338, 1330
HphI GGTGA 2 cut(s) 71, 499
Hpy166II GTNNAC 3 cut(s) 364, 376, 679
Hpy188I TCNGA 5 cut(s) 133, 459, 902, 1216, 1306
Hpy8I GTNNAC 3 cut(s) 364, 376, 679
Hpy99I CGWCG 2 cut(s) 31, 374
HpyAV CCTTC 2 cut(s) 431, 454
HpyCH4III ACNGT 4 cut(s) 17, 482, 683, 770
HpyCH4IV ACGT 5 cut(s) 284, 372, 378, 813, 897
HpyCH4V TGCA 8 cut(s) 97, 121, 790, 949, 998, 1097, 1274, 1336
HpyF10VI GCNNNNNNNGC 1 cut(s) 1280
HpyF3I CTNAG 4 cut(s) 930, 1068, 1131, 1303
HpySE526I ACGT 5 cut(s) 284, 372, 378, 813, 897
Hsp92I GRCGYC 1 cut(s) 372
Hsp92II CATG 7 cut(s) 74, 349, 677, 976, 1040, 1097, 1173
HspAI GCGC 2 cut(s) 385, 1317
Ksp22I TGATCA 3 cut(s) 528, 823, 1252
Kzo9I GATC 7 cut(s) 151, 155, 528, 534, 823, 1005, 1252
LmnI GCTCC 2 cut(s) 939, 978
Lsp1109I GCAGC 1 cut(s) 606
LweI GCATC 3 cut(s) 799, 1210, 1323
MaeI CTAG 5 cut(s) 75, 149, 657, 1055, 1232
MaeII ACGT 5 cut(s) 284, 372, 378, 813, 897
MaeIII GTNAC 3 cut(s) 505, 1089, 1154
MalI GATC 7 cut(s) 153, 157, 530, 536, 825, 1007, 1254
MboI GATC 7 cut(s) 151, 155, 528, 534, 823, 1005, 1252
MboII GAAGA 8 cut(s) 162, 178, 307, 480, 481, 571, 1203, 1235
MflI RGATCY 1 cut(s) 534
MhlI GDGCHC 5 cut(s) 146, 246, 358, 645, 936
MluCI AATT 3 cut(s) 869, 1022, 1323
MlyI GAGTC 2 cut(s) 76, 369
MmeI TCCRAC 2 cut(s) 445, 1129
Mph1103I ATGCAT 2 cut(s) 792, 1099
MseI TTAA 4 cut(s) 51, 540, 564, 662
MslI CAYNNNNRTG 2 cut(s) 18, 795
MspI CCGG 3 cut(s) 309, 338, 1330
MspR9I CCNGG 3 cut(s) 352, 779, 882
Mva1269I GAATGC 1 cut(s) 267
MvaI CCWGG 3 cut(s) 352, 779, 882
MwoI GCNNNNNNNGC 1 cut(s) 1280
NcoI CCATGG 1 cut(s) 1169
NdeII GATC 7 cut(s) 151, 155, 528, 534, 823, 1005, 1252
NlaIII CATG 7 cut(s) 74, 349, 677, 976, 1040, 1097, 1173
NlaIV GGNNCC 2 cut(s) 243, 980
NmuCI GTSAC 2 cut(s) 505, 1154
NsiI ATGCAT 2 cut(s) 792, 1099
NspI RCATGY 3 cut(s) 677, 976, 1097
OliI CACNNNNGTG 1 cut(s) 18
PaeR7I CTCGAG 1 cut(s) 357
PagI TCATGA 1 cut(s) 1036
PasI CCCWGGG 1 cut(s) 778
PciI ACATGT 2 cut(s) 673, 972
PcsI WCGNNNNNNNCGW 1 cut(s) 414
PctI GAATGC 1 cut(s) 267
PfeI GAWTC 5 cut(s) 128, 312, 323, 410, 589
PkrI GCNGC 3 cut(s) 106, 297, 621
Ple19I CGATCG 1 cut(s) 158
PleI GAGTC 2 cut(s) 75, 368
PpsI GAGTC 2 cut(s) 75, 368
PscI ACATGT 2 cut(s) 673, 972
Psp124BI GAGCTC 2 cut(s) 645, 936
Psp1406I AACGTT 2 cut(s) 378, 813
Psp6I CCWGG 3 cut(s) 350, 777, 880
PspGI CCWGG 3 cut(s) 350, 777, 880
PspN4I GGNNCC 2 cut(s) 243, 980
PspPI GGNCC 3 cut(s) 602, 926, 1048
PspXI VCTCGAGB 1 cut(s) 357
PsuI RGATCY 1 cut(s) 534
PvuI CGATCG 1 cut(s) 158
RsaI GTAC 3 cut(s) 479, 685, 704
RsaNI GTAC 3 cut(s) 478, 684, 703
RseI CAYNNNNRTG 2 cut(s) 18, 795
SacI GAGCTC 2 cut(s) 645, 936
SaqAI TTAA 4 cut(s) 51, 540, 564, 662
SatI GCNGC 3 cut(s) 105, 296, 620
Sau3AI GATC 7 cut(s) 151, 155, 528, 534, 823, 1005, 1252
Sau96I GGNCC 3 cut(s) 602, 926, 1048
SchI GAGTC 2 cut(s) 76, 369
ScrFI CCNGG 3 cut(s) 352, 779, 882
SduI GDGCHC 5 cut(s) 146, 246, 358, 645, 936
SfaNI GCATC 3 cut(s) 799, 1210, 1323
Sfr274I CTCGAG 1 cut(s) 357
SinI GGWCC 2 cut(s) 602, 1048
SlaI CTCGAG 1 cut(s) 357
SmiMI CAYNNNNRTG 2 cut(s) 18, 795
SmlI CTYRAG 3 cut(s) 357, 752, 1136
SmoI CTYRAG 3 cut(s) 357, 752, 1136
Sse9I AATT 3 cut(s) 869, 1022, 1323
SsiI CCGC 3 cut(s) 104, 296, 835
SspI AATATT 1 cut(s) 582
SspMI CTAG 5 cut(s) 75, 149, 657, 1055, 1232
SstI GAGCTC 2 cut(s) 645, 936
StyD4I CCNGG 3 cut(s) 350, 777, 880
StyI CCWWGG 2 cut(s) 982, 1169
TaaI ACNGT 4 cut(s) 17, 482, 683, 770
TaiI ACGT 5 cut(s) 287, 375, 381, 816, 900
TasI AATT 3 cut(s) 869, 1022, 1323
TatI WGTACW 2 cut(s) 477, 683
TauI GCSGC 2 cut(s) 107, 298
TfiI GAWTC 5 cut(s) 128, 312, 323, 410, 589
Tru1I TTAA 4 cut(s) 51, 540, 564, 662
Tru9I TTAA 4 cut(s) 51, 540, 564, 662
TscAI CASTG 3 cut(s) 207, 487, 717
TseFI GTSAC 2 cut(s) 505, 1154
TseI GCWGC 1 cut(s) 619
Tsp45I GTSAC 2 cut(s) 505, 1154
TspDTI ATGAA 4 cut(s) 456, 531, 759, 954
TspGWI ACGGA 1 cut(s) 223
TspRI CASTG 3 cut(s) 207, 487, 717
VpaK11BI GGWCC 2 cut(s) 602, 1048
XapI RAATTY 1 cut(s) 869
XbaI TCTAGA 2 cut(s) 148, 1231
XceI RCATGY 3 cut(s) 677, 976, 1097
XhoI CTCGAG 1 cut(s) 357
XmiI GTMKAC 1 cut(s) 363
XspI CTAG 5 cut(s) 75, 149, 657, 1055, 1232
ZraI GACGTC 1 cut(s) 373
Zsp2I ATGCAT 2 cut(s) 792, 1099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.