Prupe.1G496600_v2.0.a1

LRR-repeat protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
41170448 .. 41173220
2773 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G496600.1

Sequence Viewer

Length: 1674 bp
ATGCCGAAAAGAAAGGCTAAGCATTCTGGATGGACATATGGGAAACGGCAAAAGATTCCAATCAATTTGGGTGATAAGGAAGATAATTATTCCGAGGAGGATCAGATCAGTCAGCTACCAGATGTCATTCTAATTAGCATTCTTTCCTTATTGGGTATCAGGGAAGCAGCAAGAACTCGTGTCCTCTCTAAGAGGTGGATCTGTGTGTGGAAACAGATTACTTGTCTCAACTTCGATGATATAGATGCATTATCCAAACCACAGAAGAAAAGAAGGCAACGAGTGAAAACAGCATCTAGTTACAATTGGGTGAATCAAGTCTTGCAATTGCACCAGGGTCCATCCTTAGATGAATTCAAAATTCGTTCTTCCTCACTCGATTACAGTCCTAGTAGTTCTGAAATCGACAATTGGATTGAATTTGCAATGTGGAGGAGAGTTCAAGGCCTTGAGATAGATTTGGAAGCAGGCAGACGGTCTCGTTTTTCTTCTCCCAGTTATATCTTTCCAGATAAGCCATTTAGAAGCCCTTTTGGTATTTCCTGCATCAAGTCCCTTAAACACCTCTCTTTGTCCTTTGTAAATATAACCGATCAATTAGTAAATTTGAAAGTTGCTGGTTCATCACTCCGGTTGAATTTCCTACAAATAAGTGAGTGTACGTCTTTAGGATTAGTTGAGATTTGGGCTCCTAATCTCGTATCATTTATTTATAAGGGAATGTTGGGTTTTTGTGACAGTATTCGTTTGCAGAAATTGTATTCCTCAGCTGCCAGTTATATCTTTCCAGATAAGCCATTTAGAAGCCCTTTCGGCGTTTCCTGCATCAAGTCCCTTAAACACCTCTCCTTGTCATTTGTAAACATAACCGGTGAACTTGTTGAGCACTTTCTATCCAATTGTGAACTCCTTGAGCATCTTTGCGTTTCTTGCTCGGATCAATTAGTAACTTTGAAAGTTGCCGGTTTGTCACTCCGGATGAAGTTCCTACAAATAAGTGACTGTATATATTTAGAAAAAATTGAGATTTGTGCTCCTAATCTCGTGTCATTTATTTATCACGGAATGCTGGGTTTCTATGACAGTATTCGTTTGAGGCATGCACCCTTGCTTGTAAATGTATCACTTGCAGAAAGTACTAGGTCTATAGTTCCAACTTTTCCTCCGGTTAAAAGTTGTCTTCCTCAGCTGGTGACTCTCAATCTCAACTTGCACATGAATCTGAATATGCTAAGATGGGCACGAGTGCCATGTCTGAGGAATTTGCAGAAGGTTAATAAATGTCCTCATCAGTGCCTTAAGGTGGTGAAATTTTCTGGGTTCGTTGGGTCTAGTATCGACACTGAGCTTGCCATGTACTTCACTGAGAATGCCGTTGCGCTTGAAACGTTTCTCGTCGATCTCAGAAAGGTTGTCGTTGAAGAATCCACTCTATTGTCTGAATTTGTTACAACCCAGAAACAATTGAGGGCAGCAAGAAAGCGTGCTTTGCAGATGGAGAGACGAGAAGTGGCCCAGATATCGAGATATGATCTCGCAAAGCAAGTTGACAGCTTGATCAGACCCCTAAATCCCTCAAGGCAGAAACTACATATTCATCACTTATCCAAACCAGTGCACCTTGTTTGTGCTTCCGTTGTCTTGTTGCAGTGTATGGCGGAGACTGTTACTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

558

Amino Acids

63.42

Weight (kDa)

9.36

Isoelectric Point (pI)

59.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 714
AccIII TCCGGA 1 cut(s) 975
AciI CCGC 1 cut(s) 1658
AclI AACGTT 1 cut(s) 1388
AclWI GGATC 3 cut(s) 108, 206, 945
AcsI RAATTY 8 cut(s) 353, 360, 419, 604, 637, 1261, 1310, 1442
AfaI GTAC 3 cut(s) 661, 1138, 1358
AfiI CCNNNNNNNGG 1 cut(s) 1303
AflII CTTAAG 1 cut(s) 1298
AgeI ACCGGT 1 cut(s) 869
AgsI TTSAA 8 cut(s) 358, 419, 443, 610, 637, 955, 1385, 1421
AjnI CCWGG 1 cut(s) 333
AluBI AGCT 5 cut(s) 115, 770, 1189, 1348, 1554
AluI AGCT 5 cut(s) 115, 770, 1189, 1348, 1554
Alw21I GWGCWC 3 cut(s) 888, 1036, 1620
Alw26I GTCTC 4 cut(s) 230, 483, 1495, 1655
Alw44I GTGCAC 1 cut(s) 1616
AlwI GGATC 3 cut(s) 108, 206, 945
Aor13HI TCCGGA 1 cut(s) 975
AoxI GGCC 2 cut(s) 445, 1512
ApaLI GTGCAC 1 cut(s) 1616
ApeKI GCWGC 3 cut(s) 167, 770, 1472
ApoI RAATTY 8 cut(s) 353, 360, 419, 604, 637, 1261, 1310, 1442
AsiGI ACCGGT 1 cut(s) 869
Asp700I GAANNNNTTC 1 cut(s) 1389
AspLEI GCGC 1 cut(s) 1381
AspS9I GGNCC 2 cut(s) 338, 1513
AsuHPI GGTGA 5 cut(s) 83, 322, 884, 1204, 1318
AvaII GGWCC 1 cut(s) 338
BaeGI GKGCMC 2 cut(s) 1243, 1620
BanII GRGCYC 1 cut(s) 691
BauI CACGAG 3 cut(s) 177, 1043, 1242
BbsI GAAGAC 1 cut(s) 1172
Bbv12I GWGCWC 3 cut(s) 888, 1036, 1620
BbvCI CCTCAGC 2 cut(s) 766, 1185
BbvI GCAGC 3 cut(s) 179, 757, 1484
BccI CCATC 4 cut(s) 24, 349, 1230, 1489
BceAI ACGGC 2 cut(s) 62, 1358
BciT130I CCWGG 1 cut(s) 335
BclI TGATCA 1 cut(s) 1557
BcoDI GTCTC 4 cut(s) 230, 483, 1495, 1655
BfaI CTAG 4 cut(s) 297, 390, 1140, 1332
BfmI CTRYAG 1 cut(s) 1146
BfrI CTTAAG 1 cut(s) 1298
BglI GCCNNNNNGGC 1 cut(s) 813
BisI GCNGC 3 cut(s) 168, 771, 1473
BlpI GCTNAGC 1 cut(s) 18
BlsI GCNGC 3 cut(s) 169, 772, 1474
BmcAI AGTACT 1 cut(s) 1138
Bme1390I CCNGG 1 cut(s) 335
Bme18I GGWCC 1 cut(s) 338
BmgT120I GGNCC 2 cut(s) 338, 1513
BmiI GGNNCC 2 cut(s) 339, 690
BmrFI CCNGG 1 cut(s) 335
BmrI ACTGGG 1 cut(s) 489
BmsI GCATC 5 cut(s) 235, 302, 555, 834, 925
BmuI ACTGGG 1 cut(s) 489
BpiI GAAGAC 1 cut(s) 1172
Bpu10I CCTNAGC 2 cut(s) 766, 1185
Bpu1102I GCTNAGC 1 cut(s) 18
BpuEI CTTGAG 3 cut(s) 470, 932, 1561
BsaBI GATNNNNATC 1 cut(s) 59
BsaI GGTCTC 1 cut(s) 483
BsaJI CCNNGG 2 cut(s) 93, 334
BsaWI WCCGGW 4 cut(s) 630, 869, 975, 1165
BsaXI ACNNNNNCTCC 2 cut(s) 1147, 1177
Bsc4I CCNNNNNNNGG 1 cut(s) 1303
Bse118I RCCGGY 2 cut(s) 869, 962
Bse1I ACTGG 3 cut(s) 495, 774, 1613
Bse3DI GCAATG 1 cut(s) 432
Bse8I GATNNNNATC 1 cut(s) 59
BseAI TCCGGA 1 cut(s) 975
BseBI CCWGG 1 cut(s) 335
BseDI CCNNGG 2 cut(s) 93, 334
BseGI GGATG 3 cut(s) 35, 341, 984
BseJI GATNNNNATC 1 cut(s) 59
BseLI CCNNNNNNNGG 1 cut(s) 1303
BseMI GCAATG 1 cut(s) 432
BseMII CTCAG 6 cut(s) 780, 1199, 1247, 1335, 1356, 1417
BseNI ACTGG 3 cut(s) 495, 774, 1613
BseRI GAGGAG 2 cut(s) 110, 448
BseSI GKGCMC 2 cut(s) 1243, 1620
BseXI GCAGC 3 cut(s) 179, 757, 1484
BseYI CCCAGC 1 cut(s) 1069
BshFI GGCC 2 cut(s) 447, 1514
BshTI ACCGGT 1 cut(s) 869
BsiHKAI GWGCWC 3 cut(s) 888, 1036, 1620
BsiSI CCGG 5 cut(s) 631, 870, 963, 976, 1166
BslFI GGGAC 2 cut(s) 538, 817
BslI CCNNNNNNNGG 1 cut(s) 1303
BsmAI GTCTC 4 cut(s) 230, 483, 1495, 1655
BsmBI CGTCTC 1 cut(s) 1495
BsmFI GGGAC 2 cut(s) 538, 817
BsmI GAATGC 4 cut(s) 22, 138, 1071, 1375
BsnI GGCC 2 cut(s) 447, 1514
Bso31I GGTCTC 1 cut(s) 483
Bsp1286I GDGCHC 5 cut(s) 691, 888, 1036, 1243, 1620
Bsp13I TCCGGA 1 cut(s) 975
Bsp143I GATC 8 cut(s) 100, 105, 198, 592, 937, 1399, 1531, 1557
Bsp1720I GCTNAGC 1 cut(s) 18
BspACI CCGC 1 cut(s) 1658
BspANI GGCC 2 cut(s) 447, 1514
BspCNI CTCAG 6 cut(s) 779, 1198, 1248, 1336, 1357, 1416
BspEI TCCGGA 1 cut(s) 975
BspLI GGNNCC 2 cut(s) 339, 690
BspPI GGATC 3 cut(s) 108, 206, 945
BspTI CTTAAG 1 cut(s) 1298
BspTNI GGTCTC 1 cut(s) 483
BsrDI GCAATG 1 cut(s) 432
BsrFI RCCGGY 2 cut(s) 869, 962
BsrI ACTGG 3 cut(s) 495, 774, 1613
BssAI RCCGGY 2 cut(s) 869, 962
BssECI CCNNGG 2 cut(s) 93, 334
BssMI GATC 8 cut(s) 100, 105, 198, 592, 937, 1399, 1531, 1557
BssSI CACGAG 3 cut(s) 177, 1043, 1242
Bst2BI CACGAG 3 cut(s) 177, 1043, 1242
Bst2UI CCWGG 1 cut(s) 335
Bst4CI ACNGT 6 cut(s) 386, 477, 740, 1004, 1085, 1666
BstAFI CTTAAG 1 cut(s) 1298
BstC8I GCNNGC 4 cut(s) 469, 1101, 1350, 1485
BstF5I GGATG 3 cut(s) 35, 341, 984
BstHHI GCGC 1 cut(s) 1381
BstKTI GATC 8 cut(s) 103, 108, 201, 595, 940, 1402, 1534, 1560
BstMAI GTCTC 4 cut(s) 230, 483, 1495, 1655
BstMBI GATC 8 cut(s) 100, 105, 198, 592, 937, 1399, 1531, 1557
BstMWI GCNNNNNNNGC 4 cut(s) 813, 822, 930, 1489
BstNI CCWGG 1 cut(s) 335
BstNSI RCATGY 1 cut(s) 1103
BstSCI CCNGG 1 cut(s) 333
BstSFI CTRYAG 1 cut(s) 1146
BstSLI GKGCMC 2 cut(s) 1243, 1620
BstV1I GCAGC 3 cut(s) 179, 757, 1484
BstV2I GAAGAC 1 cut(s) 1172
BstX2I RGATCY 1 cut(s) 198
BstYI RGATCY 1 cut(s) 198
BsuRI GGCC 2 cut(s) 447, 1514
BtsCI GGATG 3 cut(s) 35, 341, 984
BtsI GCAGTG 1 cut(s) 1655
BtsIMutI CAGTG 5 cut(s) 1298, 1341, 1362, 1620, 1655
Cac8I GCNNGC 4 cut(s) 469, 1101, 1350, 1485
CfoI GCGC 1 cut(s) 1381
Cfr10I RCCGGY 2 cut(s) 869, 962
Cfr13I GGNCC 2 cut(s) 338, 1513
Csp6I GTAC 3 cut(s) 660, 1137, 1357
CspAI ACCGGT 1 cut(s) 869
CviAII CATG 4 cut(s) 1100, 1216, 1251, 1354
CviQI GTAC 3 cut(s) 660, 1137, 1357
DpnI GATC 8 cut(s) 102, 107, 200, 594, 939, 1401, 1533, 1559
DpnII GATC 8 cut(s) 100, 105, 198, 592, 937, 1399, 1531, 1557
EciI GGCGGA 1 cut(s) 1673
Eco147I AGGCCT 1 cut(s) 447
Eco24I GRGCYC 1 cut(s) 691
Eco31I GGTCTC 1 cut(s) 483
Eco32I GATATC 1 cut(s) 1521
Eco47I GGWCC 1 cut(s) 338
EcoRI GAATTC 1 cut(s) 353
EcoRII CCWGG 1 cut(s) 333
EcoRV GATATC 1 cut(s) 1521
EcoT22I ATGCAT 1 cut(s) 250
EcoT38I GRGCYC 1 cut(s) 691
Esp3I CGTCTC 1 cut(s) 1495
FaeI CATG 4 cut(s) 1103, 1219, 1254, 1357
FaqI GGGAC 2 cut(s) 538, 817
FatI CATG 4 cut(s) 1099, 1215, 1250, 1353
FauNDI CATATG 1 cut(s) 37
FbaI TGATCA 1 cut(s) 1557
Fnu4HI GCNGC 3 cut(s) 168, 771, 1473
FokI GGATG 3 cut(s) 42, 328, 991
FriOI GRGCYC 1 cut(s) 691
Fsp4HI GCNGC 3 cut(s) 168, 771, 1473
FspBI CTAG 4 cut(s) 297, 390, 1140, 1332
GlaI GCGC 1 cut(s) 1380
GluI GCNGC 3 cut(s) 168, 771, 1473
GsaI CCCAGC 1 cut(s) 1073
HaeIII GGCC 2 cut(s) 447, 1514
HapII CCGG 5 cut(s) 631, 870, 963, 976, 1166
HhaI GCGC 1 cut(s) 1381
Hin1II CATG 4 cut(s) 1103, 1219, 1254, 1357
Hin6I GCGC 1 cut(s) 1379
HinP1I GCGC 1 cut(s) 1379
HincII GTYRAC 1 cut(s) 1549
HindII GTYRAC 1 cut(s) 1549
HinfI GANTC 5 cut(s) 55, 313, 1195, 1219, 1424
HpaII CCGG 5 cut(s) 631, 870, 963, 976, 1166
HphI GGTGA 5 cut(s) 83, 322, 884, 1204, 1318
Hpy166II GTNNAC 6 cut(s) 660, 862, 875, 905, 1549, 1618
Hpy188I TCNGA 9 cut(s) 94, 105, 400, 937, 1224, 1257, 1406, 1441, 1562
Hpy188III TCNNGA 5 cut(s) 27, 509, 788, 976, 1524
Hpy8I GTNNAC 6 cut(s) 660, 862, 875, 905, 1549, 1618
Hpy99I CGWCG 1 cut(s) 1400
HpyAV CCTTC 2 cut(s) 267, 1264
HpyCH4III ACNGT 6 cut(s) 386, 477, 740, 1004, 1085, 1666
HpyCH4IV ACGT 2 cut(s) 662, 1388
HpyF10VI GCNNNNNNNGC 4 cut(s) 813, 822, 930, 1489
HpySE526I ACGT 2 cut(s) 662, 1388
Hsp92II CATG 4 cut(s) 1103, 1219, 1254, 1357
HspAI GCGC 1 cut(s) 1379
Kpn2I TCCGGA 1 cut(s) 975
Ksp22I TGATCA 1 cut(s) 1557
Kzo9I GATC 8 cut(s) 100, 105, 198, 592, 937, 1399, 1531, 1557
LmnI GCTCC 2 cut(s) 694, 1039
Lsp1109I GCAGC 3 cut(s) 179, 757, 1484
LweI GCATC 5 cut(s) 235, 302, 555, 834, 925
MaeI CTAG 4 cut(s) 297, 390, 1140, 1332
MaeII ACGT 2 cut(s) 662, 1388
MaeIII GTNAC 8 cut(s) 299, 734, 946, 969, 998, 1192, 1447, 1666
MalI GATC 8 cut(s) 102, 107, 200, 594, 939, 1401, 1533, 1559
MboI GATC 8 cut(s) 100, 105, 198, 592, 937, 1399, 1531, 1557
MboII GAAGA 6 cut(s) 92, 277, 360, 480, 1172, 1433
MfeI CAATTG 5 cut(s) 304, 326, 409, 898, 1463
MflI RGATCY 1 cut(s) 198
MhlI GDGCHC 5 cut(s) 691, 888, 1036, 1243, 1620
MlyI GAGTC 1 cut(s) 1189
MmeI TCCRAC 1 cut(s) 1178
Mph1103I ATGCAT 1 cut(s) 250
MroI TCCGGA 1 cut(s) 975
MroXI GAANNNNTTC 1 cut(s) 1389
MseI TTAA 5 cut(s) 558, 837, 1170, 1275, 1299
MspA1I CMGCKG 2 cut(s) 770, 1189
MspCI CTTAAG 1 cut(s) 1298
MspI CCGG 5 cut(s) 631, 870, 963, 976, 1166
MspR9I CCNGG 1 cut(s) 335
MunI CAATTG 5 cut(s) 304, 326, 409, 898, 1463
Mva1269I GAATGC 4 cut(s) 22, 138, 1071, 1375
MvaI CCWGG 1 cut(s) 335
MwoI GCNNNNNNNGC 4 cut(s) 813, 822, 930, 1489
NdeI CATATG 1 cut(s) 37
NdeII GATC 8 cut(s) 100, 105, 198, 592, 937, 1399, 1531, 1557
NlaIII CATG 4 cut(s) 1103, 1219, 1254, 1357
NlaIV GGNNCC 2 cut(s) 339, 690
NmuCI GTSAC 4 cut(s) 734, 969, 998, 1192
NsiI ATGCAT 1 cut(s) 250
NspI RCATGY 1 cut(s) 1103
PaeI GCATGC 1 cut(s) 1103
PceI AGGCCT 1 cut(s) 447
PctI GAATGC 4 cut(s) 22, 138, 1071, 1375
PdmI GAANNNNTTC 1 cut(s) 1389
PfeI GAWTC 4 cut(s) 55, 313, 1219, 1424
PinAI ACCGGT 1 cut(s) 869
PkrI GCNGC 3 cut(s) 169, 772, 1474
PleI GAGTC 1 cut(s) 1189
PpsI GAGTC 1 cut(s) 1189
PsiI TTATAA 1 cut(s) 714
Psp1406I AACGTT 1 cut(s) 1388
Psp6I CCWGG 1 cut(s) 333
PspFI CCCAGC 1 cut(s) 1069
PspGI CCWGG 1 cut(s) 333
PspN4I GGNNCC 2 cut(s) 339, 690
PspPI GGNCC 2 cut(s) 338, 1513
PsuI RGATCY 1 cut(s) 198
PvuII CAGCTG 2 cut(s) 770, 1189
RsaI GTAC 3 cut(s) 661, 1138, 1358
RsaNI GTAC 3 cut(s) 660, 1137, 1357
SaqAI TTAA 5 cut(s) 558, 837, 1170, 1275, 1299
SatI GCNGC 3 cut(s) 168, 771, 1473
Sau3AI GATC 8 cut(s) 100, 105, 198, 592, 937, 1399, 1531, 1557
Sau96I GGNCC 2 cut(s) 338, 1513
ScaI AGTACT 1 cut(s) 1138
SchI GAGTC 1 cut(s) 1189
ScrFI CCNGG 1 cut(s) 335
SduI GDGCHC 5 cut(s) 691, 888, 1036, 1243, 1620
SfaNI GCATC 5 cut(s) 235, 302, 555, 834, 925
SfcI CTRYAG 1 cut(s) 1146
SinI GGWCC 1 cut(s) 338
SmlI CTYRAG 4 cut(s) 449, 911, 1298, 1576
SmoI CTYRAG 4 cut(s) 449, 911, 1298, 1576
SphI GCATGC 1 cut(s) 1103
SseBI AGGCCT 1 cut(s) 447
SsiI CCGC 1 cut(s) 1658
SspMI CTAG 4 cut(s) 297, 390, 1140, 1332
StuI AGGCCT 1 cut(s) 447
StyD4I CCNGG 1 cut(s) 333
TaaI ACNGT 6 cut(s) 386, 477, 740, 1004, 1085, 1666
TaiI ACGT 2 cut(s) 665, 1391
TaqI TCGA 6 cut(s) 234, 378, 405, 1338, 1398, 1523
TatI WGTACW 2 cut(s) 1136, 1356
TfiI GAWTC 4 cut(s) 55, 313, 1219, 1424
Tru1I TTAA 5 cut(s) 558, 837, 1170, 1275, 1299
Tru9I TTAA 5 cut(s) 558, 837, 1170, 1275, 1299
TscAI CASTG 5 cut(s) 1298, 1348, 1369, 1620, 1655
TseFI GTSAC 4 cut(s) 734, 969, 998, 1192
TseI GCWGC 3 cut(s) 167, 770, 1472
Tsp45I GTSAC 4 cut(s) 734, 969, 998, 1192
TspDTI ATGAA 5 cut(s) 366, 612, 995, 1232, 1586
TspGWI ACGGA 2 cut(s) 1077, 1624
TspRI CASTG 5 cut(s) 1298, 1348, 1369, 1620, 1655
Vha464I CTTAAG 1 cut(s) 1298
VneI GTGCAC 1 cut(s) 1616
VpaK11BI GGWCC 1 cut(s) 338
XapI RAATTY 8 cut(s) 353, 360, 419, 604, 637, 1261, 1310, 1442
XceI RCATGY 1 cut(s) 1103
XmnI GAANNNNTTC 1 cut(s) 1389
XspI CTAG 4 cut(s) 297, 390, 1140, 1332
ZrmI AGTACT 1 cut(s) 1138
Zsp2I ATGCAT 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.