Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0002523

Physical Location & Seq

Genomic Coordinates Forward (+)

14276458 .. 14278810

Gene Structure 2353 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G090200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 975 bp

ATGGTTGCTCAAATGGAGGATGCCCAAGAAGTATCTGAAACAATGCCAGACAAATTATCTGAAAATGCACAGGAAACTCGCGACGAAATGCTTTCAAGGCACAGGAAAGAGATATCAAAACTTCAGGACAAGGAAACTGAAATGAAGAAGGCAGCTGCCAAAGGGAGCAAGGCTGAACAAAAAGCTAAGAAAAAGCAGGTGGAGGAAGAGATTTCTCGGCTCTCTGCTAAGCTTAAAGAAAAACATGCTGAAGAACTTGCTTCATTAGGCTATAGCACTAGTAATGGAACTGAGAAAGCCAAACTTGACAATTTAGTCAAAGCCATAGCTGGTGTTTCTGTCATCAGTCAACCTGACCAAGCAAAGCCCAGCAAGAGTTCAAAGAGGCGGGACAAAAGGGCTCAGCAAGATGCAGCTAGGGAGCAAAGAATTCAAGAAGAGCAGAGCAACCTAGTTAGTGATCGAATGATTGAGAATGAGAAACTAGCGAAAAAGCTTGAACCGCTTGGTTTGACCATTAATGAAATAAAGCCCGATGGTCATTGCCTCTACCGAGCTATCCAGGATCAGCTGGCCCATCTTTCCGGAGGTTCATCACCTTACACGTACCAAGAGCTTCGAGAAATGGTGGCTGCTTATATGAGGAAGCATGCATCTGATTTTCTCCCATTTTTCTTGTCAGAGAATCCAGTAGATGGAGATTCTGAGGATTCACTTGCAGAGAGGTTTGAGAACTACTGTAAAGAAGTGGAGTCAACAGCGGCATGGGGAGGACAGCTAGAGCTTGGTGCTTTAACTCACTGCCTCAAAAAGCATATCATGATATACTCAGGATCCTTCCCTGATGTGGAGATGGGCAAGGAGTACAAATCTGATAGCAGCAGTACTGGTTCTTCTGATTCGAGTATTATGTTGTCGTACCATAAGCATGCATTTGGGCTTGGTGAGCACTATAATTCTGTGGTCCGAATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

OTU

Protein Analysis

325

Amino Acids

36.29

Weight (kDa)

6.0

Isoelectric Point (pI)

48.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002523)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G62940 AT3G62940 AT3G62940 AT3G62940 AT3G62940
fragaria_vesca	FvH4_2g14201 FvH4_2g14201 FvH4_2g14201
malus_domestica	MD03G1278200.v1.1 MD11G1300200.v1.1
prunus_persica	Prupe.2G090200_v2.0.a1 Prupe.2G090200_v2.0.a1 Prupe.8G254400_v2.0.a1 Prupe.8G254400_v2.0.a1 Prupe.8G254400_v2.0.a1
pyrus_communis	pycom03g22160 pycom11g26360
rosa_chinensis	RchiOBHm_Chr3g0496291 RchiOBHm_Chr5g0001231 RchiOBHm_Chr5g0082561 RchiOBHm_Chr6g0247511 RchiOBHm_Chr6g0292881
rosa_laevigata	RLG00000011983 RLG00000015114 RLG00000015120
rosa_multiflora	Rmu_sc0000147.1_g000079 Rmu_sc0000391.1_g000019 Rmu_sc0000391.1_g000020 Rmu_sc0000639.1_g000016 Rmu_ssc0000454.1_g000017
rosa_roxburghii	Rroxscaffold_4G00287890 Rroxscaffold_6G00416780 Rroxscaffold_7G00174620 Rroxscaffold_7G00186560
rosa_rugosa	Rorug06G0230500
rosa_samantha	Rh3CG361400 Rh6AG343800 Rh6BG351000 Rh6CG358000 Rh6DG343900
rosa_wichuraiana	Rw6G029990

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	187
AasI	GACNNNNNNGTC	1 cut(s)	314
Acc36I	ACCTGC	1 cut(s)	187
AccB7I	CCANNNNNTGG	1 cut(s)	695
AccII	CGCG	1 cut(s)	81
AccIII	TCCGGA	1 cut(s)	584
AciI	CCGC	3 cut(s)	388, 503, 761
AclWI	GGATC	3 cut(s)	573, 828, 841
AcsI	RAATTY	1 cut(s)	429
AcuI	CTGAAG	2 cut(s)	107, 270
AfaI	GTAC	4 cut(s)	608, 866, 886, 920
AfiI	CCNNNNNNNGG	2 cut(s)	695, 847
AflIII	ACRYGT	1 cut(s)	603
AgsI	TTSAA	4 cut(s)	96, 381, 434, 500
AhlI	ACTAGT	1 cut(s)	278
AjnI	CCWGG	1 cut(s)	561
Alw21I	GWGCWC	1 cut(s)	951
AlwI	GGATC	3 cut(s)	573, 828, 841
Aor13HI	TCCGGA	1 cut(s)	584
AoxI	GGCC	1 cut(s)	573
ApeKI	GCWGC	5 cut(s)	152, 155, 413, 632, 879
ApoI	RAATTY	1 cut(s)	429
AseI	ATTAAT	1 cut(s)	519
AspS9I	GGNCC	2 cut(s)	574, 964
AsuHPI	GGTGA	2 cut(s)	588, 956
AvaII	GGWCC	1 cut(s)	964
BamHI	GGATCC	1 cut(s)	833
BanII	GRGCYC	1 cut(s)	403
BarI	GAAGNNNNNNTAC	2 cut(s)	877, 909
Bbv12I	GWGCWC	1 cut(s)	951
BbvI	GCAGC	5 cut(s)	142, 164, 425, 619, 891
BccI	CCATC	4 cut(s)	530, 585, 689, 847
BciT130I	CCWGG	1 cut(s)	563
BcuI	ACTAGT	1 cut(s)	278
BfaI	CTAG	5 cut(s)	279, 417, 452, 485, 779
BfmI	CTRYAG	1 cut(s)	271
BfuAI	ACCTGC	1 cut(s)	187
BisI	GCNGC	6 cut(s)	153, 156, 414, 633, 762, 880
BlpI	GCTNAGC	2 cut(s)	228, 402
BlsI	GCNGC	6 cut(s)	154, 157, 415, 634, 763, 881
BmcAI	AGTACT	1 cut(s)	886
Bme1390I	CCNGG	1 cut(s)	563
Bme18I	GGWCC	1 cut(s)	964
BmgT120I	GGNCC	2 cut(s)	574, 964
BmiI	GGNNCC	1 cut(s)	835
BmrFI	CCNGG	1 cut(s)	563
BmsI	GCATC	3 cut(s)	10, 400, 662
Bpu1102I	GCTNAGC	2 cut(s)	228, 402
BsaAI	YACGTR	1 cut(s)	606
BsaWI	WCCGGW	1 cut(s)	584
Bsc4I	CCNNNNNNNGG	2 cut(s)	695, 847
Bse1I	ACTGG	2 cut(s)	689, 892
Bse3DI	GCAATG	1 cut(s)	541
BseAI	TCCGGA	1 cut(s)	584
BseBI	CCWGG	1 cut(s)	563
BseGI	GGATG	1 cut(s)	25
BseLI	CCNNNNNNNGG	2 cut(s)	695, 847
BseMI	GCAATG	1 cut(s)	541
BseMII	CTCAG	4 cut(s)	282, 416, 696, 843
BseNI	ACTGG	2 cut(s)	689, 892
BseXI	GCAGC	5 cut(s)	142, 164, 425, 619, 891
BseYI	CCCAGC	1 cut(s)	368
Bsh1236I	CGCG	1 cut(s)	81
BshFI	GGCC	1 cut(s)	575
BsiHKAI	GWGCWC	1 cut(s)	951
BsiSI	CCGG	1 cut(s)	585
BslFI	GGGAC	1 cut(s)	404
BslI	CCNNNNNNNGG	2 cut(s)	695, 847
BsmFI	GGGAC	1 cut(s)	404
BsnI	GGCC	1 cut(s)	575
Bsp1286I	GDGCHC	2 cut(s)	403, 951
Bsp13I	TCCGGA	1 cut(s)	584
Bsp143I	GATC	3 cut(s)	460, 565, 833
Bsp1720I	GCTNAGC	2 cut(s)	228, 402
Bsp68I	TCGCGA	1 cut(s)	81
BspACI	CCGC	3 cut(s)	388, 503, 761
BspANI	GGCC	1 cut(s)	575
BspCNI	CTCAG	4 cut(s)	283, 415, 697, 842
BspEI	TCCGGA	1 cut(s)	584
BspFNI	CGCG	1 cut(s)	81
BspHI	TCATGA	1 cut(s)	819
BspLI	GGNNCC	1 cut(s)	835
BspMI	ACCTGC	1 cut(s)	187
BspPI	GGATC	3 cut(s)	573, 828, 841
BspQI	GCTCTTC	1 cut(s)	432
BsrDI	GCAATG	1 cut(s)	541
BsrI	ACTGG	2 cut(s)	689, 892
BssMI	GATC	3 cut(s)	460, 565, 833
Bst2UI	CCWGG	1 cut(s)	563
Bst4CI	ACNGT	1 cut(s)	740
Bst6I	CTCTTC	2 cut(s)	201, 432
BstBAI	YACGTR	1 cut(s)	606
BstC8I	GCNNGC	3 cut(s)	573, 651, 930
BstDEI	CTNAG	6 cut(s)	186, 228, 291, 402, 705, 829
BstF5I	GGATG	1 cut(s)	25
BstFNI	CGCG	1 cut(s)	81
BstKTI	GATC	3 cut(s)	463, 568, 836
BstMBI	GATC	3 cut(s)	460, 565, 833
BstMWI	GCNNNNNNNGC	3 cut(s)	97, 502, 946
BstNI	CCWGG	1 cut(s)	563
BstNSI	RCATGY	3 cut(s)	248, 653, 932
BstSCI	CCNGG	1 cut(s)	561
BstSFI	CTRYAG	1 cut(s)	271
BstUI	CGCG	1 cut(s)	81
BstV1I	GCAGC	5 cut(s)	142, 164, 425, 619, 891
BstX2I	RGATCY	1 cut(s)	833
BstYI	RGATCY	1 cut(s)	833
BsuRI	GGCC	1 cut(s)	575
BtsCI	GGATG	1 cut(s)	25
BtsI	GCAGTG	1 cut(s)	799
BtsIMutI	CAGTG	1 cut(s)	799
BtuMI	TCGCGA	1 cut(s)	81
BveI	ACCTGC	1 cut(s)	187
Cac8I	GCNNGC	3 cut(s)	573, 651, 930
CciI	TCATGA	1 cut(s)	819
Cfr13I	GGNCC	2 cut(s)	574, 964
Csp6I	GTAC	4 cut(s)	607, 865, 885, 919
CviAII	CATG	5 cut(s)	245, 650, 765, 820, 929
CviQI	GTAC	4 cut(s)	607, 865, 885, 919
DdeI	CTNAG	6 cut(s)	186, 228, 291, 402, 705, 829
DpnI	GATC	3 cut(s)	462, 567, 835
DpnII	GATC	3 cut(s)	460, 565, 833
DrdI	GACNNNNNNGTC	1 cut(s)	314
DseDI	GACNNNNNNGTC	1 cut(s)	314
Eam1104I	CTCTTC	2 cut(s)	201, 432
EarI	CTCTTC	2 cut(s)	201, 432
Eco24I	GRGCYC	1 cut(s)	403
Eco32I	GATATC	1 cut(s)	114
Eco47I	GGWCC	1 cut(s)	964
Eco57I	CTGAAG	2 cut(s)	107, 270
EcoRI	GAATTC	1 cut(s)	429
EcoRII	CCWGG	1 cut(s)	561
EcoRV	GATATC	1 cut(s)	114
EcoT22I	ATGCAT	2 cut(s)	655, 934
EcoT38I	GRGCYC	1 cut(s)	403
FaeI	CATG	5 cut(s)	248, 653, 768, 823, 932
FalI	AAGNNNNNCTT	2 cut(s)	288, 320
FaqI	GGGAC	1 cut(s)	404
FatI	CATG	5 cut(s)	244, 649, 764, 819, 928
FauI	CCCGC	1 cut(s)	381
Fnu4HI	GCNGC	6 cut(s)	153, 156, 414, 633, 762, 880
FokI	GGATG	1 cut(s)	32
FriOI	GRGCYC	1 cut(s)	403
Fsp4HI	GCNGC	6 cut(s)	153, 156, 414, 633, 762, 880
FspBI	CTAG	5 cut(s)	279, 417, 452, 485, 779
GluI	GCNGC	6 cut(s)	153, 156, 414, 633, 762, 880
GsaI	CCCAGC	1 cut(s)	372
HaeIII	GGCC	1 cut(s)	575
HapII	CCGG	1 cut(s)	585
Hin1II	CATG	5 cut(s)	248, 653, 768, 823, 932
HincII	GTYRAC	2 cut(s)	350, 756
HindII	GTYRAC	2 cut(s)	350, 756
HindIII	AAGCTT	2 cut(s)	230, 494
HinfI	GANTC	5 cut(s)	685, 701, 710, 752, 899
HpaII	CCGG	1 cut(s)	585
HphI	GGTGA	2 cut(s)	588, 956
Hpy166II	GTNNAC	2 cut(s)	350, 756
Hpy188I	TCNGA	8 cut(s)	37, 61, 658, 682, 706, 874, 898, 968
Hpy188III	TCNNGA	7 cut(s)	80, 125, 434, 585, 620, 820, 831
Hpy8I	GTNNAC	2 cut(s)	350, 756
Hpy99I	CGWCG	1 cut(s)	86
HpyAV	CCTTC	2 cut(s)	142, 847
HpyCH4III	ACNGT	1 cut(s)	740
HpyCH4IV	ACGT	1 cut(s)	605
HpyCH4V	TGCA	5 cut(s)	68, 413, 653, 719, 932
HpyF10VI	GCNNNNNNNGC	3 cut(s)	97, 502, 946
HpyF3I	CTNAG	6 cut(s)	186, 228, 291, 402, 705, 829
HpySE526I	ACGT	1 cut(s)	605
Hsp92II	CATG	5 cut(s)	248, 653, 768, 823, 932
Kpn2I	TCCGGA	1 cut(s)	584
Kzo9I	GATC	3 cut(s)	460, 565, 833
LguI	GCTCTTC	1 cut(s)	432
LmnI	GCTCC	2 cut(s)	165, 421
Lsp1109I	GCAGC	5 cut(s)	142, 164, 425, 619, 891
LweI	GCATC	3 cut(s)	10, 400, 662
MaeI	CTAG	5 cut(s)	279, 417, 452, 485, 779
MaeII	ACGT	1 cut(s)	605
MalI	GATC	3 cut(s)	462, 567, 835
MboI	GATC	3 cut(s)	460, 565, 833
MboII	GAAGA	5 cut(s)	157, 218, 263, 449, 885
MflI	RGATCY	1 cut(s)	833
MhlI	GDGCHC	2 cut(s)	403, 951
MluCI	AATT	4 cut(s)	53, 310, 429, 955
MlyI	GAGTC	1 cut(s)	761
Mph1103I	ATGCAT	2 cut(s)	655, 934
MroI	TCCGGA	1 cut(s)	584
MseI	TTAA	3 cut(s)	234, 519, 794
MslI	CAYNNNNRTG	1 cut(s)	927
MspA1I	CMGCKG	3 cut(s)	155, 571, 761
MspI	CCGG	1 cut(s)	585
MspR9I	CCNGG	1 cut(s)	563
MvaI	CCWGG	1 cut(s)	563
MvnI	CGCG	1 cut(s)	81
MwoI	GCNNNNNNNGC	3 cut(s)	97, 502, 946
NdeII	GATC	3 cut(s)	460, 565, 833
NlaIII	CATG	5 cut(s)	248, 653, 768, 823, 932
NlaIV	GGNNCC	1 cut(s)	835
NmeAIII	GCCGAG	1 cut(s)	196
NruI	TCGCGA	1 cut(s)	81
NsiI	ATGCAT	2 cut(s)	655, 934
NspI	RCATGY	3 cut(s)	248, 653, 932
PaeI	GCATGC	2 cut(s)	653, 932
PagI	TCATGA	1 cut(s)	819
PaqCI	CACCTGC	1 cut(s)	187
PciSI	GCTCTTC	1 cut(s)	432
PfeI	GAWTC	4 cut(s)	685, 701, 710, 899
PflMI	CCANNNNNTGG	1 cut(s)	695
PfoI	TCCNGGA	1 cut(s)	561
PkrI	GCNGC	6 cut(s)	154, 157, 415, 634, 763, 881
PleI	GAGTC	1 cut(s)	760
PpsI	GAGTC	1 cut(s)	760
Ppu21I	YACGTR	1 cut(s)	606
PshBI	ATTAAT	1 cut(s)	519
Psp6I	CCWGG	1 cut(s)	561
PspFI	CCCAGC	1 cut(s)	368
PspGI	CCWGG	1 cut(s)	561
PspN4I	GGNNCC	1 cut(s)	835
PspPI	GGNCC	2 cut(s)	574, 964
PsuI	RGATCY	1 cut(s)	833
PvuII	CAGCTG	2 cut(s)	155, 571
RruI	TCGCGA	1 cut(s)	81
RsaI	GTAC	4 cut(s)	608, 866, 886, 920
RsaNI	GTAC	4 cut(s)	607, 865, 885, 919
RseI	CAYNNNNRTG	1 cut(s)	927
SapI	GCTCTTC	1 cut(s)	432
SaqAI	TTAA	3 cut(s)	234, 519, 794
SatI	GCNGC	6 cut(s)	153, 156, 414, 633, 762, 880
Sau3AI	GATC	3 cut(s)	460, 565, 833
Sau96I	GGNCC	2 cut(s)	574, 964
ScaI	AGTACT	1 cut(s)	886
SchI	GAGTC	1 cut(s)	761
ScrFI	CCNGG	1 cut(s)	563
SduI	GDGCHC	2 cut(s)	403, 951
SfaNI	GCATC	3 cut(s)	10, 400, 662
SfcI	CTRYAG	1 cut(s)	271
SinI	GGWCC	1 cut(s)	964
SmiMI	CAYNNNNRTG	1 cut(s)	927
SpeI	ACTAGT	1 cut(s)	278
SphI	GCATGC	2 cut(s)	653, 932
Sse9I	AATT	4 cut(s)	53, 310, 429, 955
SsiI	CCGC	3 cut(s)	388, 503, 761
SspMI	CTAG	5 cut(s)	279, 417, 452, 485, 779
StyD4I	CCNGG	1 cut(s)	561
TaaI	ACNGT	1 cut(s)	740
TaiI	ACGT	1 cut(s)	608
TaqI	TCGA	3 cut(s)	463, 619, 902
TasI	AATT	4 cut(s)	53, 310, 429, 955
TatI	WGTACW	2 cut(s)	864, 884
TauI	GCSGC	1 cut(s)	764
TfiI	GAWTC	4 cut(s)	685, 701, 710, 899
Tru1I	TTAA	3 cut(s)	234, 519, 794
Tru9I	TTAA	3 cut(s)	234, 519, 794
TscAI	CASTG	1 cut(s)	806
TseI	GCWGC	5 cut(s)	152, 155, 413, 632, 879
TspDTI	ATGAA	4 cut(s)	158, 252, 537, 582
TspRI	CASTG	1 cut(s)	806
Van91I	CCANNNNNTGG	1 cut(s)	695
VpaK11BI	GGWCC	1 cut(s)	964
VspI	ATTAAT	1 cut(s)	519
XapI	RAATTY	1 cut(s)	429
XceI	RCATGY	3 cut(s)	248, 653, 932
XspI	CTAG	5 cut(s)	279, 417, 452, 485, 779
ZrmI	AGTACT	1 cut(s)	886
Zsp2I	ATGCAT	2 cut(s)	655, 934

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.