Rroxscaffold_7G00186560

OTU domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
OG0002523
Physical Location & Seq
Reverse (-)
25895634 .. 25899393
3760 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00186560.1

Sequence Viewer

Length: 2682 bp
ATGGCAGATCTACCACCACCGGCCACGGCGGGTCTCTACCCCTACCAGCTGCAACAACCACCTCCGCTGCCACCTAGACCATCAGTCACCGTCCACGCGTTGGCTGAGTCACCATCCCCAGCCCACATGAGGTACACCAACCGCTCAGTCTCAATTGGTGATTTCAATCACAACATGAACCAGCAACATTTTTCTTTGAATGATGATTGTGGTGCTTTGAGTCCTGTCTCTGTTGCTAAAGTGACTGATATTGATGAGAAATTAGATATGGGGAAGGGAGAGATTTCTGATAAGATGGTTAAGGTGCATAGTGGGGTTGGTAGAAAGTTCAATGAGCTAGAGAGTGTTACTGTTAAGCAAGGTGATCAGGGACCAAGTTTGTGTGGGAAAAGAGGGGAATACCCTGCACTCTACATGTTTGATAAAATGTTGCAATCAGATGGGATATGTAATGCAGGAAGGACCAGTATTGCTCCTATGAGCATTCGAGACAAAGGTGGAGGACTCGCTTCTAAACTAGGAAACAAGTATAGGCTTGTTAAGGGTTGTGATGATGTTAAAGCTGCTACATCTATGTCTGCTGGGAATGATGTGCAATTTGGAACAATGCTTGTTGCTGCTATCAACAAGGCTAATGGAGGTGAAGCGAGTAATTTGGATACTTTAATGAAGGTCATAGCTGGTGTTCCTGTAAGCAGTCACTTTGAGAATGTAAAGCCTGGCAAGAGTTCAAAGAAAAAAGTGATAGGGGCTCAGGAGGATGCAAGAAGGAAGCAGAGAAGTCAAGAAGAACAAAGCAAGTTAATAAGCAATCAAATGGTTGAGGATGAGAAACCAGAAAAAAAGCTTGAACCCCTCGGGTTGACAATTAATGAGACAAAGGCTAATGGTCATTGTCTCTATAGTGCTATCCAGGATCAGCTAGCCCACCTTTTTGGAGGCTCTTCACTTTACTCATACCAAGGTCTTCGAGAAATGGTGACTGTGTATATGTGCCATGTACCTGAGGTCCCATCTTTCTTGCCAAACAACCAAGTAGATGGTGATTCTGAGGACTCACTTGGAGAAAGGATTGAGAATTACTGTAAGGAAGTGGAATCATCAGAAGCATGGGGAGGACATCTAGAGGTTGGAGCTTTAACTCATTGCCTTAAAAAGTGTCTCAGTATATGCTCAGGATCATTCCCTGATGTAGATAATGTGAATGGTATCATTGGACTAGCCCATTATATGGGTCAACAGCTTGATGAAACTACAAATAAATGGAGTTGGTGCAAACAAGAGTTCGGAGAAAAATATATGTTTGTGACTATTGACAACTTATGCATTGCTTTAGTTTTAAAATTTTGTCCAATTGGTATAGATGAGGGGCCAGAGACATGGTTTTTGGATGTGATGAATGGGAATTTGGACACAATGGCATCTGAGATGAATAAACTGCAGCTGTATATTGGTGTGGTACACCAAGGAATTAAGCTATTTTCTGTGCAAGGCTTGGGCAGTTTACTGGGTGATAGTATGAGGAACTTTTATCTTGTCCTTGTGGAAACTGATCACTCAAGTCAACATATGGAAGTGGAGAAAATGAATTTTATTAAAGCTTTCGAAATAGACTGTTTCATAGCTTTAAAGTTGGCACTGTTACTGCCTTTTAAACCACTACAGTTACAGTGTTTGGTTGCTTTTGAGGACAAGTTGAAGCAAGGAGGCATTTCTGACATTATTGGTGGAGACCTTGAGTCATTAGTGCTACTGTTACTCTCTGGTGTCGTGTCCTATGAGTTTGTTAAGGGAGATCAGCAGCTTCAATTTCTCTTAACTCCTATTATTGTGTTAGTTGTGGGAGAAGCATCTACAAGTTTAGAGTTGCTGCAAAATGAATCTCAAATTGATCAAGCAGATGTCAAGGCTATTGTTGCAAGGTTCTCCCATAGGGGTCTATCCGAACTTGTTGCAAGTTGGCTATATGTTTCTTTGAGGTATTGTTTTCCTTCAGCCATCACAATGGTTACTACTTTTCTTCTTTCTGTGGCATTAGTTATGTGTGTTACTGCTTGTGGTGTGATGGAGACTATAAAAAAAGCACACATTGATGGAATTGTTGAGAAAGCTAAGAAGAAGCAACTTGGTGCTGTTTTGGGATTAGTTGATGATGCCTTGGAATTCTCAGGCAGGGACACGGAAGTGATCGAGGCAAATTCTACATATGAGTGTGTAACAGTAGCAAGGGGTTTTCAAAAAAGAACAATGCGCTCTCTTCAGGTGGTCTATATCTCTTCAAGCTTCAAAGGATATGTGGTATTGACATCAGCCATGTTGCATAAAAGACTTTACAAAAAGAAGGGAGCAGCTGCCACTCTATGGCTAGTGCAATGGGAGGGGACGTCTCCAGAAGAAGCCACTTGGAAAGATGCAGAAGATATGATGCTGAGGTACCCTACTTTTGATGTTGATGTGCCAACAACTGATAGCGGCCATATGACTAGGTCAAGCATGCGTACAGGACCTCACAAAGGACAAGTTAACAAAACTTGGGGGAAGATGATGAGGAAATCTTGCAGCATTTCCCTGAATTTCAAGCTTGAGGACAAGCTTCTCTTATGGGGGCTGGATTGTTATGAAAAAGGTCTTAATTGCTCGTGCATATGCCTGGCACGTGGTTGTTGCAAGTTAATTAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
OTU

Protein Analysis

893

Amino Acids

98.25

Weight (kDa)

6.04

Isoelectric Point (pI)

38.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
OTU PF02338 295 - 396 3.4e-13 OTU-like cysteine protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 2387
Acc65I GGTACC 1 cut(s) 2433
AccB1I GGYRCC 1 cut(s) 2433
AccB7I CCANNNNNTGG 3 cut(s) 100, 1231, 2361
AccBSI CCGCTC 1 cut(s) 144
AccII CGCG 1 cut(s) 98
AciI CCGC 4 cut(s) 29, 65, 142, 2472
AclWI GGATC 2 cut(s) 924, 1186
AcoI YGGCCR 2 cut(s) 21, 2473
AcsI RAATTY 6 cut(s) 1343, 1405, 1588, 2162, 2197, 2572
AcuI CTGAAG 2 cut(s) 1977, 2243
AcvI CACGTG 1 cut(s) 2657
AcyI GRCGYC 1 cut(s) 2384
AfaI GTAC 5 cut(s) 134, 1002, 1461, 2435, 2500
AfiI CCNNNNNNNGG 5 cut(s) 100, 129, 1231, 2361, 2513
AflIII ACRYGT 2 cut(s) 96, 414
AhdI GACNNNNNGTC 2 cut(s) 83, 1738
AjnI CCWGG 3 cut(s) 718, 912, 2649
AjuI GAANNNNNNNTTGG 2 cut(s) 1391, 1423
AleI CACNNNNGTG 1 cut(s) 2183
AlwI GGATC 2 cut(s) 924, 1186
Ama87I CYCGRG 1 cut(s) 857
AoxI GGCC 3 cut(s) 21, 1370, 2473
ApoI RAATTY 6 cut(s) 1343, 1405, 1588, 2162, 2197, 2572
ArsI GACNNNNNNTTYG 2 cut(s) 1369, 1401
AseI ATTAAT 1 cut(s) 870
Asp718I GGTACC 1 cut(s) 2433
AspLEI GCGC 1 cut(s) 2253
AspS9I GGNCC 5 cut(s) 371, 462, 1009, 1370, 2504
AsuHPI GGTGA 8 cut(s) 79, 102, 170, 374, 653, 991, 1055, 1523
AsuII TTCGAA 1 cut(s) 1605
AsuNHI GCTAGC 1 cut(s) 922
AvaI CYCGRG 1 cut(s) 857
AvaII GGWCC 4 cut(s) 371, 462, 1009, 2504
AxyI CCTNAGG 1 cut(s) 1005
BanI GGYRCC 1 cut(s) 2433
BanII GRGCYC 1 cut(s) 754
BauI CACGAG 1 cut(s) 2638
BbrPI CACGTG 1 cut(s) 2657
BbsI GAAGAC 1 cut(s) 959
BbvCI CCTCAGC 1 cut(s) 2429
BccI CCATC 9 cut(s) 88, 121, 289, 434, 1021, 1034, 2006, 2059, 2087
BceAI ACGGC 1 cut(s) 42
BcgI CGANNNNNNTGC 2 cut(s) 1934, 1968
BciT130I CCWGG 3 cut(s) 720, 914, 2651
BciVI GTATCC 1 cut(s) 652
BclI TGATCA 3 cut(s) 364, 1552, 1891
BfaI CTAG 8 cut(s) 75, 338, 518, 923, 1124, 1220, 2366, 2484
BfmI CTRYAG 3 cut(s) 901, 1439, 1661
BfuI GTATCC 1 cut(s) 652
BglII AGATCT 1 cut(s) 7
Bme1390I CCNGG 3 cut(s) 720, 914, 2651
Bme18I GGWCC 4 cut(s) 371, 462, 1009, 2504
BmeRI GACNNNNNGTC 2 cut(s) 83, 1738
BmeT110I CYCGRG 1 cut(s) 857
BmgT120I GGNCC 5 cut(s) 371, 462, 1009, 1370, 2504
BmiI GGNNCC 4 cut(s) 372, 1011, 1371, 2435
BmrFI CCNGG 3 cut(s) 720, 914, 2651
BmrI ACTGGG 1 cut(s) 1517
BmsI GCATC 6 cut(s) 751, 1430, 1859, 2143, 2401, 2415
BmtI GCTAGC 1 cut(s) 926
BmuI ACTGGG 1 cut(s) 1517
BpiI GAAGAC 1 cut(s) 959
BpmI CTGGAG 1 cut(s) 2373
Bpu10I CCTNAGC 3 cut(s) 753, 1174, 2429
Bpu14I TTCGAA 1 cut(s) 1605
BpuEI CTTGAG 3 cut(s) 1543, 1757, 2603
BsaAI YACGTR 1 cut(s) 2657
BsaBI GATNNNNATC 1 cut(s) 165
BsaHI GRCGYC 1 cut(s) 2384
BsaI GGTCTC 2 cut(s) 38, 1725
BsaJI CCNNGG 5 cut(s) 24, 856, 961, 1465, 2157
BsaXI ACNNNNNCTCC 2 cut(s) 2369, 2399
Bsc4I CCNNNNNNNGG 5 cut(s) 100, 129, 1231, 2361, 2513
Bse118I RCCGGY 1 cut(s) 19
Bse1I ACTGG 2 cut(s) 465, 1512
Bse21I CCTNAGG 1 cut(s) 1005
Bse3DI GCAATG 3 cut(s) 1144, 1326, 2378
Bse8I GATNNNNATC 1 cut(s) 165
BseBI CCWGG 3 cut(s) 720, 914, 2651
BseDI CCNNGG 5 cut(s) 24, 856, 961, 1465, 2157
BseGI GGATG 4 cut(s) 113, 766, 832, 1396
BseJI GATNNNNATC 1 cut(s) 165
BseLI CCNNNNNNNGG 5 cut(s) 100, 129, 1231, 2361, 2513
BseMI GCAATG 3 cut(s) 1144, 1326, 2378
BseNI ACTGG 2 cut(s) 465, 1512
BseYI CCCAGC 2 cut(s) 118, 581
BsgI GTGCAG 1 cut(s) 390
Bsh1236I CGCG 1 cut(s) 98
BshFI GGCC 3 cut(s) 23, 1372, 2475
BshNI GGYRCC 1 cut(s) 2433
BsiHKCI CYCGRG 1 cut(s) 857
BsiSI CCGG 1 cut(s) 20
BslFI GGGAC 4 cut(s) 384, 995, 2189, 2395
BslI CCNNNNNNNGG 5 cut(s) 100, 129, 1231, 2361, 2513
BsmBI CGTCTC 1 cut(s) 2391
BsmFI GGGAC 4 cut(s) 384, 995, 2189, 2395
BsmI GAATGC 1 cut(s) 483
BsnI GGCC 3 cut(s) 23, 1372, 2475
Bso31I GGTCTC 2 cut(s) 38, 1725
BsoBI CYCGRG 1 cut(s) 857
Bsp119I TTCGAA 1 cut(s) 1605
Bsp1286I GDGCHC 1 cut(s) 754
Bsp143I GATC 8 cut(s) 7, 364, 916, 1178, 1552, 1795, 1891, 2187
BspACI CCGC 4 cut(s) 29, 65, 142, 2472
BspANI GGCC 3 cut(s) 23, 1372, 2475
BspFNI CGCG 1 cut(s) 98
BspLI GGNNCC 4 cut(s) 372, 1011, 1371, 2435
BspMAI CTGCAG 1 cut(s) 1443
BspOI GCTAGC 1 cut(s) 926
BspPI GGATC 2 cut(s) 924, 1186
BspQI GCTCTTC 1 cut(s) 949
BspT104I TTCGAA 1 cut(s) 1605
BspT107I GGYRCC 1 cut(s) 2433
BspTNI GGTCTC 2 cut(s) 38, 1725
BsrBI CCGCTC 1 cut(s) 144
BsrDI GCAATG 3 cut(s) 1144, 1326, 2378
BsrFI RCCGGY 1 cut(s) 19
BsrI ACTGG 2 cut(s) 465, 1512
BssAI RCCGGY 1 cut(s) 19
BssECI CCNNGG 5 cut(s) 24, 856, 961, 1465, 2157
BssMI GATC 8 cut(s) 7, 364, 916, 1178, 1552, 1795, 1891, 2187
BssNI GRCGYC 1 cut(s) 2384
BssSI CACGAG 1 cut(s) 2638
BssT1I CCWWGG 3 cut(s) 961, 1465, 2157
Bst2BI CACGAG 1 cut(s) 2638
Bst2UI CCWGG 3 cut(s) 720, 914, 2651
Bst6I CTCTTC 3 cut(s) 949, 2262, 2281
BstACI GRCGYC 1 cut(s) 2384
BstBAI YACGTR 1 cut(s) 2657
BstBI TTCGAA 1 cut(s) 1605
BstC8I GCNNGC 2 cut(s) 924, 2495
BstDSI CCRYGG 1 cut(s) 24
BstENI CCTNNNNNAGG 1 cut(s) 2511
BstF5I GGATG 4 cut(s) 113, 766, 832, 1396
BstFNI CGCG 1 cut(s) 98
BstHHI GCGC 1 cut(s) 2253
BstKTI GATC 8 cut(s) 10, 367, 919, 1181, 1555, 1798, 1894, 2190
BstMBI GATC 8 cut(s) 7, 364, 916, 1178, 1552, 1795, 1891, 2187
BstMWI GCNNNNNNNGC 1 cut(s) 1916
BstNI CCWGG 3 cut(s) 720, 914, 2651
BstNSI RCATGY 2 cut(s) 418, 2497
BstSCI CCNGG 3 cut(s) 718, 912, 2649
BstSFI CTRYAG 3 cut(s) 901, 1439, 1661
BstUI CGCG 1 cut(s) 98
BstV2I GAAGAC 1 cut(s) 959
BstX2I RGATCY 1 cut(s) 7
BstXI CCANNNNNNTGG 4 cut(s) 935, 1040, 1380, 2005
BstYI RGATCY 1 cut(s) 7
Bsu36I CCTNAGG 1 cut(s) 1005
BsuI GTATCC 1 cut(s) 652
BsuRI GGCC 3 cut(s) 23, 1372, 2475
BtgI CCRYGG 1 cut(s) 24
BtsCI GGATG 4 cut(s) 113, 766, 832, 1396
BtsIMutI CAGTG 2 cut(s) 1637, 1676
Cac8I GCNNGC 2 cut(s) 924, 2495
CfoI GCGC 1 cut(s) 2253
Cfr10I RCCGGY 1 cut(s) 19
Cfr13I GGNCC 5 cut(s) 371, 462, 1009, 1370, 2504
Csp6I GTAC 5 cut(s) 133, 1001, 1460, 2434, 2499
CviAII CATG 8 cut(s) 127, 175, 415, 998, 1110, 1380, 2314, 2494
CviQI GTAC 5 cut(s) 133, 1001, 1460, 2434, 2499
DpnI GATC 8 cut(s) 9, 366, 918, 1180, 1554, 1797, 1893, 2189
DpnII GATC 8 cut(s) 7, 364, 916, 1178, 1552, 1795, 1891, 2187
DraI TTTAAA 3 cut(s) 1341, 1629, 1654
DriI GACNNNNNGTC 2 cut(s) 83, 1738
EaeI YGGCCR 2 cut(s) 21, 2473
Eam1104I CTCTTC 3 cut(s) 949, 2262, 2281
Eam1105I GACNNNNNGTC 2 cut(s) 83, 1738
EarI CTCTTC 3 cut(s) 949, 2262, 2281
Eco130I CCWWGG 3 cut(s) 961, 1465, 2157
Eco24I GRGCYC 1 cut(s) 754
Eco31I GGTCTC 2 cut(s) 38, 1725
Eco47I GGWCC 4 cut(s) 371, 462, 1009, 2504
Eco57I CTGAAG 2 cut(s) 1977, 2243
Eco72I CACGTG 1 cut(s) 2657
Eco81I CCTNAGG 1 cut(s) 1005
Eco88I CYCGRG 1 cut(s) 857
EcoNI CCTNNNNNAGG 1 cut(s) 2511
EcoO109I RGGNCCY 2 cut(s) 1009, 2504
EcoRI GAATTC 1 cut(s) 2162
EcoRII CCWGG 3 cut(s) 718, 912, 2649
EcoT14I CCWWGG 3 cut(s) 961, 1465, 2157
EcoT22I ATGCAT 1 cut(s) 1328
EcoT38I GRGCYC 1 cut(s) 754
ErhI CCWWGG 3 cut(s) 961, 1465, 2157
Esp3I CGTCTC 1 cut(s) 2391
FaeI CATG 8 cut(s) 130, 178, 418, 1001, 1113, 1383, 2317, 2497
FalI AAGNNNNNCTT 2 cut(s) 2582, 2614
FaqI GGGAC 4 cut(s) 384, 995, 2189, 2395
FatI CATG 8 cut(s) 126, 174, 414, 997, 1109, 1379, 2313, 2493
FauI CCCGC 1 cut(s) 22
FauNDI CATATG 4 cut(s) 1569, 2206, 2478, 2645
FbaI TGATCA 3 cut(s) 364, 1552, 1891
FokI GGATG 4 cut(s) 100, 773, 839, 1403
FriOI GRGCYC 1 cut(s) 754
FspBI CTAG 8 cut(s) 75, 338, 518, 923, 1124, 1220, 2366, 2484
GlaI GCGC 1 cut(s) 2252
GsaI CCCAGC 2 cut(s) 122, 585
GsuI CTGGAG 1 cut(s) 2373
HaeIII GGCC 3 cut(s) 23, 1372, 2475
HapII CCGG 1 cut(s) 20
HhaI GCGC 1 cut(s) 2253
Hin1I GRCGYC 1 cut(s) 2384
Hin1II CATG 8 cut(s) 130, 178, 418, 1001, 1113, 1383, 2317, 2497
Hin6I GCGC 1 cut(s) 2251
HinP1I GCGC 1 cut(s) 2251
HincII GTYRAC 4 cut(s) 864, 1238, 1565, 2524
HindII GTYRAC 4 cut(s) 864, 1238, 1565, 2524
HindIII AAGCTT 5 cut(s) 845, 1599, 2281, 2579, 2591
HinfI GANTC 8 cut(s) 107, 220, 504, 1046, 1055, 1097, 1739, 1880
HpaI GTTAAC 1 cut(s) 2524
HpaII CCGG 1 cut(s) 20
HphI GGTGA 8 cut(s) 79, 102, 170, 374, 653, 991, 1055, 1523
Hpy166II GTNNAC 8 cut(s) 94, 135, 864, 1238, 1462, 1505, 1565, 2524
Hpy188I TCNGA 8 cut(s) 289, 439, 1051, 1105, 1289, 1426, 1717, 1945
Hpy188III TCNNGA 7 cut(s) 488, 755, 785, 971, 1124, 1176, 2390
Hpy8I GTNNAC 8 cut(s) 94, 135, 864, 1238, 1462, 1505, 1565, 2524
HpyAV CCTTC 6 cut(s) 268, 453, 664, 762, 2001, 2335
HpyCH4IV ACGT 2 cut(s) 2384, 2656
HpyF10VI GCNNNNNNNGC 1 cut(s) 1916
HpySE526I ACGT 2 cut(s) 2384, 2656
Hsp92I GRCGYC 1 cut(s) 2384
Hsp92II CATG 8 cut(s) 130, 178, 418, 1001, 1113, 1383, 2317, 2497
HspAI GCGC 1 cut(s) 2251
KpnI GGTACC 1 cut(s) 2437
Ksp22I TGATCA 3 cut(s) 364, 1552, 1891
KspAI GTTAAC 1 cut(s) 2524
Kzo9I GATC 8 cut(s) 7, 364, 916, 1178, 1552, 1795, 1891, 2187
LguI GCTCTTC 1 cut(s) 949
LmnI GCTCC 3 cut(s) 478, 1133, 2345
LweI GCATC 6 cut(s) 751, 1430, 1859, 2143, 2401, 2415
MaeI CTAG 8 cut(s) 75, 338, 518, 923, 1124, 1220, 2366, 2484
MaeII ACGT 2 cut(s) 2384, 2656
MalI GATC 8 cut(s) 9, 366, 918, 1180, 1554, 1797, 1893, 2189
MbiI CCGCTC 1 cut(s) 144
MboI GATC 8 cut(s) 7, 364, 916, 1178, 1552, 1795, 1891, 2187
MfeI CAATTG 2 cut(s) 153, 1353
MflI RGATCY 1 cut(s) 7
MhlI GDGCHC 1 cut(s) 754
MluI ACGCGT 1 cut(s) 96
MlyI GAGTC 5 cut(s) 116, 229, 498, 1049, 1748
MmeI TCCRAC 1 cut(s) 1111
Mph1103I ATGCAT 1 cut(s) 1328
MslI CAYNNNNRTG 4 cut(s) 2003, 2091, 2183, 2209
MspA1I CMGCKG 4 cut(s) 49, 67, 1444, 2351
MspI CCGG 1 cut(s) 20
MspR9I CCNGG 3 cut(s) 720, 914, 2651
MunI CAATTG 2 cut(s) 153, 1353
Mva1269I GAATGC 1 cut(s) 483
MvaI CCWGG 3 cut(s) 720, 914, 2651
MvnI CGCG 1 cut(s) 98
MwoI GCNNNNNNNGC 1 cut(s) 1916
NdeI CATATG 4 cut(s) 1569, 2206, 2478, 2645
NdeII GATC 8 cut(s) 7, 364, 916, 1178, 1552, 1795, 1891, 2187
NheI GCTAGC 1 cut(s) 922
NlaIII CATG 8 cut(s) 130, 178, 418, 1001, 1113, 1383, 2317, 2497
NlaIV GGNNCC 4 cut(s) 372, 1011, 1371, 2435
NmuCI GTSAC 6 cut(s) 85, 108, 241, 698, 979, 1306
NsiI ATGCAT 1 cut(s) 1328
NspI RCATGY 2 cut(s) 418, 2497
NspV TTCGAA 1 cut(s) 1605
OliI CACNNNNGTG 1 cut(s) 2183
PaeI GCATGC 1 cut(s) 2497
PciI ACATGT 1 cut(s) 414
PciSI GCTCTTC 1 cut(s) 949
PctI GAATGC 1 cut(s) 483
PfeI GAWTC 3 cut(s) 1046, 1097, 1880
PflFI GACNNNGTC 1 cut(s) 2485
PflMI CCANNNNNTGG 3 cut(s) 100, 1231, 2361
PfoI TCCNGGA 1 cut(s) 912
PleI GAGTC 5 cut(s) 115, 228, 498, 1049, 1747
PmaCI CACGTG 1 cut(s) 2657
PmlI CACGTG 1 cut(s) 2657
PpsI GAGTC 5 cut(s) 115, 228, 498, 1049, 1747
Ppu21I YACGTR 1 cut(s) 2657
PpuMI RGGWCCY 2 cut(s) 1009, 2504
PscI ACATGT 1 cut(s) 414
PshBI ATTAAT 1 cut(s) 870
Psp5II RGGWCCY 2 cut(s) 1009, 2504
Psp6I CCWGG 3 cut(s) 718, 912, 2649
PspCI CACGTG 1 cut(s) 2657
PspFI CCCAGC 2 cut(s) 118, 581
PspGI CCWGG 3 cut(s) 718, 912, 2649
PspN4I GGNNCC 4 cut(s) 372, 1011, 1371, 2435
PspPI GGNCC 5 cut(s) 371, 462, 1009, 1370, 2504
PspPPI RGGWCCY 2 cut(s) 1009, 2504
PstI CTGCAG 1 cut(s) 1443
PsuI RGATCY 1 cut(s) 7
PsyI GACNNNGTC 1 cut(s) 2485
PvuII CAGCTG 3 cut(s) 49, 1444, 2351
RsaI GTAC 5 cut(s) 134, 1002, 1461, 2435, 2500
RsaNI GTAC 5 cut(s) 133, 1001, 1460, 2434, 2499
RseI CAYNNNNRTG 4 cut(s) 2003, 2091, 2183, 2209
SapI GCTCTTC 1 cut(s) 949
Sau3AI GATC 8 cut(s) 7, 364, 916, 1178, 1552, 1795, 1891, 2187
Sau96I GGNCC 5 cut(s) 371, 462, 1009, 1370, 2504
SchI GAGTC 5 cut(s) 116, 229, 498, 1049, 1748
ScrFI CCNGG 3 cut(s) 720, 914, 2651
SduI GDGCHC 1 cut(s) 754
SfaNI GCATC 6 cut(s) 751, 1430, 1859, 2143, 2401, 2415
SfcI CTRYAG 3 cut(s) 901, 1439, 1661
SfuI TTCGAA 1 cut(s) 1605
SinI GGWCC 4 cut(s) 371, 462, 1009, 2504
SmiMI CAYNNNNRTG 4 cut(s) 2003, 2091, 2183, 2209
SmlI CTYRAG 3 cut(s) 1558, 1736, 2582
SmoI CTYRAG 3 cut(s) 1558, 1736, 2582
SphI GCATGC 1 cut(s) 2497
SsiI CCGC 4 cut(s) 29, 65, 142, 2472
SspMI CTAG 8 cut(s) 75, 338, 518, 923, 1124, 1220, 2366, 2484
StyD4I CCNGG 3 cut(s) 718, 912, 2649
StyI CCWWGG 3 cut(s) 961, 1465, 2157
TaiI ACGT 2 cut(s) 2387, 2659
TaqI TCGA 4 cut(s) 487, 970, 1605, 2190
TauI GCSGC 1 cut(s) 2475
TfiI GAWTC 3 cut(s) 1046, 1097, 1880
TscAI CASTG 2 cut(s) 1644, 1676
TseFI GTSAC 6 cut(s) 85, 108, 241, 698, 979, 1306
Tsp45I GTSAC 6 cut(s) 85, 108, 241, 698, 979, 1306
TspDTI ATGAA 9 cut(s) 191, 683, 1263, 1412, 1445, 1601, 1609, 1893, 2634
TspGWI ACGGA 1 cut(s) 2195
TspRI CASTG 2 cut(s) 1644, 1676
Tth111I GACNNNGTC 1 cut(s) 2485
Van91I CCANNNNNTGG 3 cut(s) 100, 1231, 2361
VpaK11BI GGWCC 4 cut(s) 371, 462, 1009, 2504
VspI ATTAAT 1 cut(s) 870
XagI CCTNNNNNAGG 1 cut(s) 2511
XapI RAATTY 6 cut(s) 1343, 1405, 1588, 2162, 2197, 2572
XbaI TCTAGA 1 cut(s) 1123
XceI RCATGY 2 cut(s) 418, 2497
XspI CTAG 8 cut(s) 75, 338, 518, 923, 1124, 1220, 2366, 2484
ZraI GACGTC 1 cut(s) 2385
Zsp2I ATGCAT 1 cut(s) 1328
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.