pectinesterase pectinesterase inhibitor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g17310 FvH4_6g17430 |
| malus_domestica | MD01G1105400.v1.1 MD03G1086400.v1.1 MD04G1225800.v1.1 MD06G1080700.v1.1 |
| prunus_persica | Prupe.2G210700_v2.0.a1 Prupe.2G216300_v2.0.a1 Prupe.6G344600_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr1g0362901 RchiOBHm_Chr1g0362911 RchiOBHm_Chr3g0450671 RchiOBHm_Chr3g0471441 |
| rosa_laevigata | RLG00000024178 RLG00000025712 |
| rosa_multiflora | Rmu_co8224930.1_g000001 Rmu_co8324923.1_g000001 Rmu_sc0000078.1_g000035 Rmu_sc0001502.1_g000007 Rmu_sc0001502.1_g000008 Rmu_sc0006582.1_g000010 |
| rosa_roxburghii | Rroxscaffold_4G00293660 Rroxscaffold_6G00409950 Rroxscaffold_6G00428330 |
| rosa_rugosa | Rorug01G0302100 Rorug01G0302100 Rorug02G0629500 Rorug03G0117800 |
| rosa_samantha | Rh1AG311400 Rh1AG311500 Rh1BG274600 Rh1CG291800 Rh1DG305300 Rh3AG030300 Rh3AG167600 Rh3BG030600 Rh3BG030700 Rh3BG193100 Rh3CG029500 Rh3CG183500 Rh3DG030200 Rh3DG030300 Rh3DG182400 |
| rosa_wichuraiana | Rw1G027600 Rw3G002330 Rw3G015790 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1250 |
| AatII | GACGTC | 2 cut(s) | 273, 549 |
| AccB1I | GGYRCC | 2 cut(s) | 983, 1334 |
| AccI | GTMKAC | 3 cut(s) | 990, 1090, 1192 |
| AccII | CGCG | 1 cut(s) | 81 |
| AciI | CCGC | 5 cut(s) | 79, 602, 840, 981, 1080 |
| AclWI | GGATC | 2 cut(s) | 454, 515 |
| AcoI | YGGCCR | 1 cut(s) | 1361 |
| AcsI | RAATTY | 2 cut(s) | 214, 575 |
| AcyI | GRCGYC | 2 cut(s) | 270, 546 |
| AfaI | GTAC | 3 cut(s) | 239, 1216, 1316 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 854, 1442 |
| AgeI | ACCGGT | 3 cut(s) | 888, 903, 1442 |
| AgsI | TTSAA | 4 cut(s) | 130, 386, 580, 1139 |
| AjnI | CCWGG | 3 cut(s) | 511, 533, 1043 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1169, 1201 |
| AluBI | AGCT | 3 cut(s) | 135, 311, 509 |
| AluI | AGCT | 3 cut(s) | 135, 311, 509 |
| AlwI | GGATC | 2 cut(s) | 454, 515 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 524, 1148 |
| Ama87I | CYCGRG | 1 cut(s) | 1330 |
| ApeKI | GCWGC | 7 cut(s) | 469, 472, 475, 506, 605, 882, 1432 |
| ApoI | RAATTY | 2 cut(s) | 214, 575 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 983, 1015 |
| AsiGI | ACCGGT | 3 cut(s) | 888, 903, 1442 |
| AspLEI | GCGC | 2 cut(s) | 83, 871 |
| AspS9I | GGNCC | 6 cut(s) | 282, 448, 798, 845, 949, 1328 |
| AsuC2I | CCSGG | 4 cut(s) | 1331, 1332, 1352, 1365 |
| AsuHPI | GGTGA | 3 cut(s) | 212, 541, 1069 |
| AvaI | CYCGRG | 1 cut(s) | 1330 |
| AvaII | GGWCC | 3 cut(s) | 282, 448, 845 |
| BanI | GGYRCC | 2 cut(s) | 983, 1334 |
| BbsI | GAAGAC | 3 cut(s) | 152, 1107, 1184 |
| BbvI | GCAGC | 7 cut(s) | 481, 484, 487, 518, 592, 894, 1419 |
| BccI | CCATC | 3 cut(s) | 557, 1061, 1444 |
| BceAI | ACGGC | 2 cut(s) | 555, 1001 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1379, 1413 |
| BciT130I | CCWGG | 3 cut(s) | 513, 535, 1045 |
| BciVI | GTATCC | 1 cut(s) | 914 |
| BcnI | CCSGG | 4 cut(s) | 1331, 1332, 1352, 1365 |
| BfaI | CTAG | 2 cut(s) | 756, 1032 |
| BfmI | CTRYAG | 3 cut(s) | 504, 1129, 1466 |
| BfuI | GTATCC | 1 cut(s) | 914 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 602 |
| BglII | AGATCT | 1 cut(s) | 1462 |
| BisI | GCNGC | 9 cut(s) | 470, 473, 476, 507, 603, 606, 883, 982, 1433 |
| BlsI | GCNGC | 9 cut(s) | 471, 474, 477, 508, 604, 607, 884, 983, 1434 |
| Bme1390I | CCNGG | 7 cut(s) | 513, 535, 1045, 1331, 1332, 1352, 1365 |
| Bme18I | GGWCC | 3 cut(s) | 282, 448, 845 |
| BmeT110I | CYCGRG | 1 cut(s) | 1330 |
| BmgT120I | GGNCC | 6 cut(s) | 282, 448, 798, 845, 949, 1328 |
| BmiI | GGNNCC | 3 cut(s) | 284, 985, 1336 |
| BmrFI | CCNGG | 7 cut(s) | 513, 535, 1045, 1331, 1332, 1352, 1365 |
| BmrI | ACTGGG | 1 cut(s) | 94 |
| BmsI | GCATC | 2 cut(s) | 487, 583 |
| BmuI | ACTGGG | 1 cut(s) | 94 |
| BpiI | GAAGAC | 3 cut(s) | 152, 1107, 1184 |
| BpmI | CTGGAG | 2 cut(s) | 495, 759 |
| BpuMI | CCSGG | 4 cut(s) | 1331, 1332, 1352, 1365 |
| Bsa29I | ATCGAT | 1 cut(s) | 441 |
| BsaAI | YACGTR | 1 cut(s) | 1214 |
| BsaHI | GRCGYC | 2 cut(s) | 270, 546 |
| BsaJI | CCNNGG | 7 cut(s) | 150, 451, 1043, 1196, 1330, 1338, 1383 |
| BsaWI | WCCGGW | 3 cut(s) | 888, 903, 1442 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 493, 523 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 854, 1442 |
| Bse118I | RCCGGY | 3 cut(s) | 888, 903, 1442 |
| Bse1I | ACTGG | 2 cut(s) | 100, 1123 |
| Bse3DI | GCAATG | 5 cut(s) | 597, 757, 822, 932, 1168 |
| BseBI | CCWGG | 3 cut(s) | 513, 535, 1045 |
| BseCI | ATCGAT | 1 cut(s) | 441 |
| BseDI | CCNNGG | 7 cut(s) | 150, 451, 1043, 1196, 1330, 1338, 1383 |
| BseGI | GGATG | 4 cut(s) | 568, 598, 875, 1436 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 854, 1442 |
| BseMI | GCAATG | 5 cut(s) | 597, 757, 822, 932, 1168 |
| BseMII | CTCAG | 1 cut(s) | 1302 |
| BseNI | ACTGG | 2 cut(s) | 100, 1123 |
| BseXI | GCAGC | 7 cut(s) | 481, 484, 487, 518, 592, 894, 1419 |
| BsgI | GTGCAG | 3 cut(s) | 488, 510, 591 |
| Bsh1236I | CGCG | 1 cut(s) | 81 |
| Bsh1285I | CGRYCG | 2 cut(s) | 889, 893 |
| BshNI | GGYRCC | 2 cut(s) | 983, 1334 |
| BshTI | ACCGGT | 3 cut(s) | 888, 903, 1442 |
| BshVI | ATCGAT | 1 cut(s) | 441 |
| BsiEI | CGRYCG | 2 cut(s) | 889, 893 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1330 |
| BsiSI | CCGG | 7 cut(s) | 879, 889, 904, 1331, 1351, 1364, 1443 |
| BslFI | GGGAC | 2 cut(s) | 268, 1433 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 854, 1442 |
| BsmFI | GGGAC | 2 cut(s) | 268, 1433 |
| BsmI | GAATGC | 2 cut(s) | 125, 974 |
| BsoBI | CYCGRG | 1 cut(s) | 1330 |
| Bsp143I | GATC | 5 cut(s) | 301, 393, 459, 520, 1462 |
| BspACI | CCGC | 5 cut(s) | 79, 602, 840, 981, 1080 |
| BspCNI | CTCAG | 1 cut(s) | 1303 |
| BspDI | ATCGAT | 1 cut(s) | 441 |
| BspFNI | CGCG | 1 cut(s) | 81 |
| BspLI | GGNNCC | 3 cut(s) | 284, 985, 1336 |
| BspMAI | CTGCAG | 2 cut(s) | 508, 1133 |
| BspPI | GGATC | 2 cut(s) | 454, 515 |
| BspT107I | GGYRCC | 2 cut(s) | 983, 1334 |
| BsrDI | GCAATG | 5 cut(s) | 597, 757, 822, 932, 1168 |
| BsrFI | RCCGGY | 3 cut(s) | 888, 903, 1442 |
| BsrI | ACTGG | 2 cut(s) | 100, 1123 |
| BssAI | RCCGGY | 3 cut(s) | 888, 903, 1442 |
| BssECI | CCNNGG | 7 cut(s) | 150, 451, 1043, 1196, 1330, 1338, 1383 |
| BssMI | GATC | 5 cut(s) | 301, 393, 459, 520, 1462 |
| BssNI | GRCGYC | 2 cut(s) | 270, 546 |
| BssT1I | CCWWGG | 3 cut(s) | 150, 451, 1196 |
| Bst2UI | CCWGG | 3 cut(s) | 513, 535, 1045 |
| Bst4CI | ACNGT | 6 cut(s) | 223, 242, 553, 957, 988, 1219 |
| Bst6I | CTCTTC | 1 cut(s) | 64 |
| BstACI | GRCGYC | 2 cut(s) | 270, 546 |
| BstBAI | YACGTR | 1 cut(s) | 1214 |
| BstC8I | GCNNGC | 4 cut(s) | 123, 195, 861, 1348 |
| BstDEI | CTNAG | 2 cut(s) | 419, 1311 |
| BstF5I | GGATG | 4 cut(s) | 568, 598, 875, 1436 |
| BstFNI | CGCG | 1 cut(s) | 81 |
| BstHHI | GCGC | 2 cut(s) | 83, 871 |
| BstKTI | GATC | 5 cut(s) | 304, 396, 462, 523, 1465 |
| BstMBI | GATC | 5 cut(s) | 301, 393, 459, 520, 1462 |
| BstMCI | CGRYCG | 2 cut(s) | 889, 893 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 475, 602, 978, 1343 |
| BstNI | CCWGG | 3 cut(s) | 513, 535, 1045 |
| BstNSI | RCATGY | 1 cut(s) | 197 |
| BstSCI | CCNGG | 7 cut(s) | 511, 533, 1043, 1329, 1330, 1350, 1363 |
| BstSFI | CTRYAG | 3 cut(s) | 504, 1129, 1466 |
| BstUI | CGCG | 1 cut(s) | 81 |
| BstV1I | GCAGC | 7 cut(s) | 481, 484, 487, 518, 592, 894, 1419 |
| BstV2I | GAAGAC | 3 cut(s) | 152, 1107, 1184 |
| BstX2I | RGATCY | 2 cut(s) | 520, 1462 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1263 |
| BstYI | RGATCY | 2 cut(s) | 520, 1462 |
| Bsu15I | ATCGAT | 1 cut(s) | 441 |
| BsuI | GTATCC | 1 cut(s) | 914 |
| BsuTUI | ATCGAT | 1 cut(s) | 441 |
| BtsCI | GGATG | 4 cut(s) | 568, 598, 875, 1436 |
| BtsI | GCAGTG | 1 cut(s) | 1407 |
| BtsIMutI | CAGTG | 1 cut(s) | 1407 |
| Cac8I | GCNNGC | 4 cut(s) | 123, 195, 861, 1348 |
| CaiI | CAGNNNCTG | 2 cut(s) | 524, 1148 |
| CfoI | GCGC | 2 cut(s) | 83, 871 |
| Cfr10I | RCCGGY | 3 cut(s) | 888, 903, 1442 |
| Cfr13I | GGNCC | 6 cut(s) | 282, 448, 798, 845, 949, 1328 |
| Cfr9I | CCCGGG | 1 cut(s) | 1330 |
| ClaI | ATCGAT | 1 cut(s) | 441 |
| Csp6I | GTAC | 3 cut(s) | 238, 1215, 1315 |
| CspAI | ACCGGT | 3 cut(s) | 888, 903, 1442 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 739, 774, 898, 933 |
| CviAII | CATG | 6 cut(s) | 181, 194, 336, 391, 718, 1428 |
| CviQI | GTAC | 3 cut(s) | 238, 1215, 1315 |
| DdeI | CTNAG | 2 cut(s) | 419, 1311 |
| DpnI | GATC | 5 cut(s) | 303, 395, 461, 522, 1464 |
| DpnII | GATC | 5 cut(s) | 301, 393, 459, 520, 1462 |
| DraI | TTTAAA | 1 cut(s) | 1456 |
| EaeI | YGGCCR | 1 cut(s) | 1361 |
| Eam1104I | CTCTTC | 1 cut(s) | 64 |
| EarI | CTCTTC | 1 cut(s) | 64 |
| Eco130I | CCWWGG | 3 cut(s) | 150, 451, 1196 |
| Eco47I | GGWCC | 3 cut(s) | 282, 448, 845 |
| Eco88I | CYCGRG | 1 cut(s) | 1330 |
| EcoO109I | RGGNCCY | 1 cut(s) | 448 |
| EcoRII | CCWGG | 3 cut(s) | 511, 533, 1043 |
| EcoT14I | CCWWGG | 3 cut(s) | 150, 451, 1196 |
| EcoT22I | ATGCAT | 1 cut(s) | 195 |
| ErhI | CCWWGG | 3 cut(s) | 150, 451, 1196 |
| FaeI | CATG | 6 cut(s) | 184, 197, 339, 394, 721, 1431 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 680, 712, 795, 827, 1169, 1201 |
| FaqI | GGGAC | 2 cut(s) | 268, 1433 |
| FatI | CATG | 6 cut(s) | 180, 193, 335, 390, 717, 1427 |
| FauI | CCCGC | 1 cut(s) | 86 |
| FauNDI | CATATG | 2 cut(s) | 189, 327 |
| FblI | GTMKAC | 3 cut(s) | 990, 1090, 1192 |
| Fnu4HI | GCNGC | 9 cut(s) | 470, 473, 476, 507, 603, 606, 883, 982, 1433 |
| FokI | GGATG | 4 cut(s) | 575, 605, 862, 1423 |
| Fsp4HI | GCNGC | 9 cut(s) | 470, 473, 476, 507, 603, 606, 883, 982, 1433 |
| FspBI | CTAG | 2 cut(s) | 756, 1032 |
| GlaI | GCGC | 2 cut(s) | 82, 870 |
| GluI | GCNGC | 9 cut(s) | 470, 473, 476, 507, 603, 606, 883, 982, 1433 |
| GsuI | CTGGAG | 2 cut(s) | 495, 759 |
| HapII | CCGG | 7 cut(s) | 879, 889, 904, 1331, 1351, 1364, 1443 |
| HhaI | GCGC | 2 cut(s) | 83, 871 |
| Hin1I | GRCGYC | 2 cut(s) | 270, 546 |
| Hin1II | CATG | 6 cut(s) | 184, 197, 339, 394, 721, 1431 |
| Hin6I | GCGC | 2 cut(s) | 81, 869 |
| HinP1I | GCGC | 2 cut(s) | 81, 869 |
| HincII | GTYRAC | 5 cut(s) | 73, 94, 991, 1168, 1193 |
| HindII | GTYRAC | 5 cut(s) | 73, 94, 991, 1168, 1193 |
| HinfI | GANTC | 5 cut(s) | 398, 807, 1103, 1145, 1391 |
| HpaI | GTTAAC | 1 cut(s) | 1168 |
| HpaII | CCGG | 7 cut(s) | 879, 889, 904, 1331, 1351, 1364, 1443 |
| HphI | GGTGA | 3 cut(s) | 212, 541, 1069 |
| Hpy166II | GTNNAC | 9 cut(s) | 73, 94, 376, 658, 991, 1091, 1168, 1193, 1405 |
| Hpy188I | TCNGA | 4 cut(s) | 520, 1099, 1150, 1384 |
| Hpy188III | TCNNGA | 4 cut(s) | 580, 738, 1032, 1292 |
| Hpy8I | GTNNAC | 9 cut(s) | 73, 94, 376, 658, 991, 1091, 1168, 1193, 1405 |
| Hpy99I | CGWCG | 1 cut(s) | 992 |
| HpyAV | CCTTC | 1 cut(s) | 797 |
| HpyCH4III | ACNGT | 6 cut(s) | 223, 242, 553, 957, 988, 1219 |
| HpyCH4IV | ACGT | 3 cut(s) | 270, 546, 1213 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 475, 602, 978, 1343 |
| HpyF3I | CTNAG | 2 cut(s) | 419, 1311 |
| HpySE526I | ACGT | 3 cut(s) | 270, 546, 1213 |
| Hsp92I | GRCGYC | 2 cut(s) | 270, 546 |
| Hsp92II | CATG | 6 cut(s) | 184, 197, 339, 394, 721, 1431 |
| HspAI | GCGC | 2 cut(s) | 81, 869 |
| KspAI | GTTAAC | 1 cut(s) | 1168 |
| Kzo9I | GATC | 5 cut(s) | 301, 393, 459, 520, 1462 |
| LmnI | GCTCC | 1 cut(s) | 514 |
| Lsp1109I | GCAGC | 7 cut(s) | 481, 484, 487, 518, 592, 894, 1419 |
| LweI | GCATC | 2 cut(s) | 487, 583 |
| MaeI | CTAG | 2 cut(s) | 756, 1032 |
| MaeII | ACGT | 3 cut(s) | 270, 546, 1213 |
| MaeIII | GTNAC | 3 cut(s) | 183, 547, 724 |
| MalI | GATC | 5 cut(s) | 303, 395, 461, 522, 1464 |
| MboI | GATC | 5 cut(s) | 301, 393, 459, 520, 1462 |
| MboII | GAAGA | 8 cut(s) | 51, 157, 215, 476, 658, 685, 1112, 1189 |
| MfeI | CAATTG | 1 cut(s) | 294 |
| MflI | RGATCY | 2 cut(s) | 520, 1462 |
| MluCI | AATT | 6 cut(s) | 214, 294, 496, 575, 1035, 1134 |
| MlyI | GAGTC | 2 cut(s) | 392, 1097 |
| MmeI | TCCRAC | 1 cut(s) | 1048 |
| MnlI | CCTC | 8 cut(s) | 37, 184, 238, 439, 706, 1252, 1348, 1378 |
| Mph1103I | ATGCAT | 1 cut(s) | 195 |
| MseI | TTAA | 4 cut(s) | 255, 306, 1167, 1455 |
| MslI | CAYNNNNRTG | 2 cut(s) | 192, 198 |
| MspA1I | CMGCKG | 1 cut(s) | 981 |
| MspI | CCGG | 7 cut(s) | 879, 889, 904, 1331, 1351, 1364, 1443 |
| MspR9I | CCNGG | 7 cut(s) | 513, 535, 1045, 1331, 1332, 1352, 1365 |
| MunI | CAATTG | 1 cut(s) | 294 |
| Mva1269I | GAATGC | 2 cut(s) | 125, 974 |
| MvaI | CCWGG | 3 cut(s) | 513, 535, 1045 |
| MvnI | CGCG | 1 cut(s) | 81 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 475, 602, 978, 1343 |
| NciI | CCSGG | 4 cut(s) | 1331, 1332, 1352, 1365 |
| NdeI | CATATG | 2 cut(s) | 189, 327 |
| NdeII | GATC | 5 cut(s) | 301, 393, 459, 520, 1462 |
| NlaIII | CATG | 6 cut(s) | 184, 197, 339, 394, 721, 1431 |
| NlaIV | GGNNCC | 3 cut(s) | 284, 985, 1336 |
| NmuCI | GTSAC | 2 cut(s) | 183, 547 |
| NsiI | ATGCAT | 1 cut(s) | 195 |
| NspI | RCATGY | 1 cut(s) | 197 |
| PaeI | GCATGC | 1 cut(s) | 197 |
| PctI | GAATGC | 2 cut(s) | 125, 974 |
| PfeI | GAWTC | 3 cut(s) | 807, 1145, 1391 |
| PfoI | TCCNGGA | 1 cut(s) | 533 |
| PinAI | ACCGGT | 3 cut(s) | 888, 903, 1442 |
| PkrI | GCNGC | 9 cut(s) | 471, 474, 477, 508, 604, 607, 884, 983, 1434 |
| PleI | GAGTC | 2 cut(s) | 392, 1097 |
| PpsI | GAGTC | 2 cut(s) | 392, 1097 |
| Ppu21I | YACGTR | 1 cut(s) | 1214 |
| PpuMI | RGGWCCY | 1 cut(s) | 448 |
| PsiI | TTATAA | 1 cut(s) | 1250 |
| Psp5II | RGGWCCY | 1 cut(s) | 448 |
| Psp6I | CCWGG | 3 cut(s) | 511, 533, 1043 |
| PspGI | CCWGG | 3 cut(s) | 511, 533, 1043 |
| PspN4I | GGNNCC | 3 cut(s) | 284, 985, 1336 |
| PspPI | GGNCC | 6 cut(s) | 282, 448, 798, 845, 949, 1328 |
| PspPPI | RGGWCCY | 1 cut(s) | 448 |
| PstI | CTGCAG | 2 cut(s) | 508, 1133 |
| PstNI | CAGNNNCTG | 2 cut(s) | 524, 1148 |
| PsuI | RGATCY | 2 cut(s) | 520, 1462 |
| RsaI | GTAC | 3 cut(s) | 239, 1216, 1316 |
| RsaNI | GTAC | 3 cut(s) | 238, 1215, 1315 |
| RseI | CAYNNNNRTG | 2 cut(s) | 192, 198 |
| SalI | GTCGAC | 2 cut(s) | 989, 1191 |
| SaqAI | TTAA | 4 cut(s) | 255, 306, 1167, 1455 |
| SatI | GCNGC | 9 cut(s) | 470, 473, 476, 507, 603, 606, 883, 982, 1433 |
| Sau3AI | GATC | 5 cut(s) | 301, 393, 459, 520, 1462 |
| Sau96I | GGNCC | 6 cut(s) | 282, 448, 798, 845, 949, 1328 |
| SchI | GAGTC | 2 cut(s) | 392, 1097 |
| ScrFI | CCNGG | 7 cut(s) | 513, 535, 1045, 1331, 1332, 1352, 1365 |
| SetI | ASST | 9 cut(s) | 137, 273, 313, 450, 511, 517, 549, 1198, 1216 |
| SfaNI | GCATC | 2 cut(s) | 487, 583 |
| SfcI | CTRYAG | 3 cut(s) | 504, 1129, 1466 |
| SgrAI | CRCCGGYG | 1 cut(s) | 1442 |
| SinI | GGWCC | 3 cut(s) | 282, 448, 845 |
| SmaI | CCCGGG | 1 cut(s) | 1332 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 192, 198 |
| SphI | GCATGC | 1 cut(s) | 197 |
| Sse9I | AATT | 6 cut(s) | 214, 294, 496, 575, 1035, 1134 |
| SsiI | CCGC | 5 cut(s) | 79, 602, 840, 981, 1080 |
| SspI | AATATT | 3 cut(s) | 346, 1208, 1246 |
| SspMI | CTAG | 2 cut(s) | 756, 1032 |
| StyD4I | CCNGG | 7 cut(s) | 511, 533, 1043, 1329, 1330, 1350, 1363 |
| StyI | CCWWGG | 3 cut(s) | 150, 451, 1196 |
| TaaI | ACNGT | 6 cut(s) | 223, 242, 553, 957, 988, 1219 |
| TaiI | ACGT | 3 cut(s) | 273, 549, 1216 |
| TaqI | TCGA | 4 cut(s) | 396, 441, 990, 1192 |
| TasI | AATT | 6 cut(s) | 214, 294, 496, 575, 1035, 1134 |
| TatI | WGTACW | 1 cut(s) | 1314 |
| TauI | GCSGC | 2 cut(s) | 605, 984 |
| TfiI | GAWTC | 3 cut(s) | 807, 1145, 1391 |
| Tru1I | TTAA | 4 cut(s) | 255, 306, 1167, 1455 |
| Tru9I | TTAA | 4 cut(s) | 255, 306, 1167, 1455 |
| TscAI | CASTG | 1 cut(s) | 1407 |
| TseFI | GTSAC | 2 cut(s) | 183, 547 |
| TseI | GCWGC | 7 cut(s) | 469, 472, 475, 506, 605, 882, 1432 |
| Tsp45I | GTSAC | 2 cut(s) | 183, 547 |
| TspGWI | ACGGA | 1 cut(s) | 58 |
| TspMI | CCCGGG | 1 cut(s) | 1330 |
| TspRI | CASTG | 1 cut(s) | 1407 |
| VpaK11BI | GGWCC | 3 cut(s) | 282, 448, 845 |
| XapI | RAATTY | 2 cut(s) | 214, 575 |
| XbaI | TCTAGA | 1 cut(s) | 1031 |
| XceI | RCATGY | 1 cut(s) | 197 |
| XmaI | CCCGGG | 1 cut(s) | 1330 |
| XmiI | GTMKAC | 3 cut(s) | 990, 1090, 1192 |
| XspI | CTAG | 2 cut(s) | 756, 1032 |
| ZraI | GACGTC | 2 cut(s) | 271, 547 |
| Zsp2I | ATGCAT | 1 cut(s) | 195 |