Prupe.6G344600_v2.0.a1

pectinesterase pectinesterase inhibitor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
29611500 .. 29613292
1793 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G344600.1

Sequence Viewer

Length: 1473 bp
ATGTGCTCCTGCCATTTCATCTTTTTCATCATTTGTCTCTCTGCTCTGTCCAAAACCCCATTTGCTAATATCATAAACGTCCCTCTGCCAGTGTTCAGAAACTCATTGCACTCTACCATGGAACTTGTCCAAAATGTGGCCTCTGTCATTCCCCGCATCCGCGTGTATGCTGATGCTCAGGATGACCATGATGATCATGATCGAAATCTTAATATTGCTATTTCACATTGTGCAGATGTGCTTGGCTCAACTTATGAAGCCTTGAATTGGTCTCTTTCCGCCATTCATCACGACCCGAAAGGTTATACACAATACTATCGCACAAATACTGATGTCATTTCCCATGCAAGAGCAAGGTTGGATGCAAACCTCGGCAGCCAAAAAACATGCATGGAAGTGTTTGATGGCACCAAATATTCCATGGCAGCACAGAGCTTCAAGCAAGTGACCACATCAACCCAAGAGTTGCTTAGCATGTTGCAAGTACCACCTGGCCGTGGCCGCAGAGCAGCTAATGCTGGCCTAAAATTTTTGCAAACGCCAAACGTTACGGTTTGTAAAGCTGGGAATGGGAATTTTAGAACAATAATGGAGGCCGTAGCTGCTGCACCAAACCATAGCCGAGATCATTTTGTGATATTTGTTAAGAAAGGATTTTACAAAGAAAACGTGAAAATCGATAGCCAAAAGTGGAATTTGGTCATGATTGGCGAGGGTATGGACGTTACTACCATATCTGGCAGTAGAAGCTTTCGCGATGGTTGGTCAACATTTGATTCACCAACATTTGCGGTATCGGCCGAAGGATTCATTGCAATGGACATGGGGTTTGAGAACGCTGCAGGACCAGAAGGTTTGCAGGCAGTTGCACTTCTATCCGCCAGCGATGGTGCTGTCTTCTATCGCTGCAAGATCAGTGGATACCAAGACTCATTGTGTGTACATGTCGGCCGTCAGTTCTATCGAGACTGCCAAATCAGTGGCAGTGTCGACTTCATCTTTGGCTATGGCACTGCTGTTTTCCAAAATTGTGCACTCATTGTCAGGAAAAATGTAATAGGCAAAATCAGCGTGGTCACAGCGCATGGCCGATATGCCCTAAACGACTCATCAGGCTTCTCCTTCCAATCATGCAAGATCTATGCAGACCCCGATTTCATAGGCGAAGCGTATCTTGGTCGACCTTGGGGTAAATATTCACGGACAGTGTTCATACAATCATATATAAGCAATGTTATAATGCCCGAAGGTTGGCTTGAATTCAGAGGGAGTTTTGGGACTGACACACTGTATTATGGTGAGTACATGAACATGGGGCCAGGTGCGGAGCTTGCAGGCCGAGTCAAGTGGACGGGATATCATGTGATTGCCAACCCATCGGAGGCTGACTGGTTTACGGCGGCCAAGTTTATTGACGGGAACTCATGGCTGCCATCCTTAGGTATCCCATACATACAAGGATTGAAGCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

491

Amino Acids

54.16

Weight (kDa)

7.18

Isoelectric Point (pI)

28.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1238
AccB1I GGYRCC 1 cut(s) 407
AccB7I CCANNNNNTGG 1 cut(s) 136
AccI GTMKAC 2 cut(s) 990, 1180
AccII CGCG 2 cut(s) 162, 756
AciI CCGC 8 cut(s) 154, 160, 279, 502, 791, 879, 1325, 1400
AclI AACGTT 1 cut(s) 546
AcoI YGGCCR 6 cut(s) 493, 499, 798, 949, 1087, 1401
AcsI RAATTY 4 cut(s) 527, 574, 694, 1259
AdeI CACNNNGTG 1 cut(s) 230
AfaI GTAC 3 cut(s) 486, 942, 1304
AfiI CCNNNNNNNGG 6 cut(s) 136, 267, 497, 1251, 1381, 1439
AflIII ACRYGT 1 cut(s) 943
AgsI TTSAA 4 cut(s) 265, 439, 1259, 1465
AjnI CCWGG 2 cut(s) 490, 1318
AjuI GAANNNNNNNTTGG 2 cut(s) 1158, 1190
AluBI AGCT 6 cut(s) 435, 512, 563, 602, 750, 1330
AluI AGCT 6 cut(s) 435, 512, 563, 602, 750, 1330
Alw21I GWGCWC 2 cut(s) 8, 1036
Alw26I GTCTC 3 cut(s) 41, 276, 960
Alw44I GTGCAC 1 cut(s) 1032
ApaLI GTGCAC 1 cut(s) 1032
ApeKI GCWGC 8 cut(s) 375, 425, 509, 602, 605, 839, 906, 1429
ApoI RAATTY 4 cut(s) 527, 574, 694, 1259
ArsI GACNNNNNNTTYG 4 cut(s) 812, 844, 983, 1015
AspLEI GCGC 1 cut(s) 1084
AspS9I GGNCC 2 cut(s) 845, 1316
AsuHPI GGTGA 2 cut(s) 771, 1310
AvaII GGWCC 1 cut(s) 845
AxyI CCTNAGG 1 cut(s) 1438
BaeGI GKGCMC 1 cut(s) 1036
BanI GGYRCC 1 cut(s) 407
BbsI GAAGAC 1 cut(s) 889
Bbv12I GWGCWC 2 cut(s) 8, 1036
BbvI GCAGC 8 cut(s) 387, 437, 521, 589, 592, 826, 893, 1416
BccI CCATC 5 cut(s) 398, 752, 881, 1384, 1441
BceAI ACGGC 4 cut(s) 480, 581, 936, 1413
BciT130I CCWGG 2 cut(s) 492, 1320
BciVI GTATCC 2 cut(s) 914, 1454
BclI TGATCA 1 cut(s) 193
BcoDI GTCTC 3 cut(s) 41, 276, 960
BfmI CTRYAG 1 cut(s) 840
BfuI GTATCC 2 cut(s) 914, 1454
BglII AGATCT 1 cut(s) 1137
BlpI GCTNAGC 1 cut(s) 470
Bme1390I CCNGG 2 cut(s) 492, 1320
Bme18I GGWCC 1 cut(s) 845
BmgT120I GGNCC 2 cut(s) 845, 1316
BmiI GGNNCC 2 cut(s) 409, 1317
BmrFI CCNGG 2 cut(s) 492, 1320
BmsI GCATC 3 cut(s) 163, 165, 352
BpiI GAAGAC 1 cut(s) 889
Bpu10I CCTNAGC 1 cut(s) 177
Bpu1102I GCTNAGC 1 cut(s) 470
Bsa29I ATCGAT 1 cut(s) 678
BsaBI GATNNNNATC 2 cut(s) 198, 204
BsaI GGTCTC 1 cut(s) 276
BsaJI CCNNGG 5 cut(s) 117, 370, 420, 496, 1184
Bsc4I CCNNNNNNNGG 6 cut(s) 136, 267, 497, 1251, 1381, 1439
Bse1I ACTGG 2 cut(s) 89, 1394
Bse21I CCTNAGG 1 cut(s) 1438
Bse3DI GCAATG 4 cut(s) 104, 810, 822, 1237
Bse8I GATNNNNATC 2 cut(s) 198, 204
BseBI CCWGG 2 cut(s) 492, 1320
BseCI ATCGAT 1 cut(s) 678
BseDI CCNNGG 5 cut(s) 117, 370, 420, 496, 1184
BseGI GGATG 4 cut(s) 156, 187, 367, 1433
BseJI GATNNNNATC 2 cut(s) 198, 204
BseLI CCNNNNNNNGG 6 cut(s) 136, 267, 497, 1251, 1381, 1439
BseMI GCAATG 4 cut(s) 104, 810, 822, 1237
BseMII CTCAG 1 cut(s) 191
BseNI ACTGG 2 cut(s) 89, 1394
BseSI GKGCMC 1 cut(s) 1036
BseX3I CGGCCG 2 cut(s) 798, 949
BseXI GCAGC 8 cut(s) 387, 437, 521, 589, 592, 826, 893, 1416
BseYI CCCAGC 1 cut(s) 563
BsgI GTGCAG 2 cut(s) 252, 591
Bsh1236I CGCG 2 cut(s) 162, 756
Bsh1285I CGRYCG 2 cut(s) 801, 952
BshNI GGYRCC 1 cut(s) 407
BshVI ATCGAT 1 cut(s) 678
BsiEI CGRYCG 2 cut(s) 801, 952
BsiHKAI GWGCWC 2 cut(s) 8, 1036
BslFI GGGAC 2 cut(s) 65, 1291
BslI CCNNNNNNNGG 6 cut(s) 136, 267, 497, 1251, 1381, 1439
BsmAI GTCTC 3 cut(s) 41, 276, 960
BsmFI GGGAC 2 cut(s) 65, 1291
Bso31I GGTCTC 1 cut(s) 276
Bsp1286I GDGCHC 2 cut(s) 8, 1036
Bsp1407I TGTACA 1 cut(s) 940
Bsp143I GATC 5 cut(s) 193, 199, 625, 912, 1137
Bsp1720I GCTNAGC 1 cut(s) 470
Bsp19I CCATGG 2 cut(s) 117, 420
Bsp68I TCGCGA 1 cut(s) 756
BspACI CCGC 8 cut(s) 154, 160, 279, 502, 791, 879, 1325, 1400
BspCNI CTCAG 1 cut(s) 190
BspDI ATCGAT 1 cut(s) 678
BspFNI CGCG 2 cut(s) 162, 756
BspHI TCATGA 2 cut(s) 196, 702
BspLI GGNNCC 2 cut(s) 409, 1317
BspMAI CTGCAG 1 cut(s) 844
BspT107I GGYRCC 1 cut(s) 407
BspTNI GGTCTC 1 cut(s) 276
BsrDI GCAATG 4 cut(s) 104, 810, 822, 1237
BsrGI TGTACA 1 cut(s) 940
BsrI ACTGG 2 cut(s) 89, 1394
BssECI CCNNGG 5 cut(s) 117, 370, 420, 496, 1184
BssMI GATC 5 cut(s) 193, 199, 625, 912, 1137
BssT1I CCWWGG 3 cut(s) 117, 420, 1184
Bst2UI CCWGG 2 cut(s) 492, 1320
Bst4CI ACNGT 3 cut(s) 553, 1207, 1290
BstAPI GCANNNNNTGC 1 cut(s) 515
BstAUI TGTACA 1 cut(s) 940
BstC8I GCNNGC 5 cut(s) 520, 861, 883, 1332, 1336
BstDEI CTNAG 3 cut(s) 177, 470, 1438
BstDSI CCRYGG 3 cut(s) 117, 420, 496
BstF5I GGATG 4 cut(s) 156, 187, 367, 1433
BstFNI CGCG 2 cut(s) 162, 756
BstHHI GCGC 1 cut(s) 1084
BstKTI GATC 5 cut(s) 196, 202, 628, 915, 1140
BstMAI GTCTC 3 cut(s) 41, 276, 960
BstMBI GATC 5 cut(s) 193, 199, 625, 912, 1137
BstMCI CGRYCG 2 cut(s) 801, 952
BstMWI GCNNNNNNNGC 7 cut(s) 501, 515, 602, 747, 797, 1068, 1331
BstNI CCWGG 2 cut(s) 492, 1320
BstNSI RCATGY 3 cut(s) 390, 478, 947
BstSCI CCNGG 2 cut(s) 490, 1318
BstSFI CTRYAG 1 cut(s) 840
BstSLI GKGCMC 1 cut(s) 1036
BstUI CGCG 2 cut(s) 162, 756
BstV1I GCAGC 8 cut(s) 387, 437, 521, 589, 592, 826, 893, 1416
BstV2I GAAGAC 1 cut(s) 889
BstX2I RGATCY 1 cut(s) 1137
BstXI CCANNNNNNTGG 1 cut(s) 980
BstYI RGATCY 1 cut(s) 1137
BstZI CGGCCG 2 cut(s) 798, 949
Bsu15I ATCGAT 1 cut(s) 678
Bsu36I CCTNAGG 1 cut(s) 1438
BsuI GTATCC 2 cut(s) 914, 1454
BsuTUI ATCGAT 1 cut(s) 678
BtgI CCRYGG 3 cut(s) 117, 420, 496
BtgZI GCGATG 2 cut(s) 771, 900
BtsCI GGATG 4 cut(s) 156, 187, 367, 1433
BtsI GCAGTG 2 cut(s) 991, 1011
BtsIMutI CAGTG 7 cut(s) 96, 922, 985, 991, 1011, 1212, 1286
BtuMI TCGCGA 1 cut(s) 756
Cac8I GCNNGC 5 cut(s) 520, 861, 883, 1332, 1336
CciI TCATGA 2 cut(s) 196, 702
CfoI GCGC 1 cut(s) 1084
Cfr13I GGNCC 2 cut(s) 845, 1316
ClaI ATCGAT 1 cut(s) 678
Csp6I GTAC 3 cut(s) 485, 941, 1303
CspCI CAANNNNNGTGG 2 cut(s) 898, 933
CviQI GTAC 3 cut(s) 485, 941, 1303
DdeI CTNAG 3 cut(s) 177, 470, 1438
DpnI GATC 5 cut(s) 195, 201, 627, 914, 1139
DpnII GATC 5 cut(s) 193, 199, 625, 912, 1137
DraIII CACNNNGTG 1 cut(s) 230
EaeI YGGCCR 6 cut(s) 493, 499, 798, 949, 1087, 1401
EagI CGGCCG 2 cut(s) 798, 949
EciI GGCGGA 2 cut(s) 268, 868
EclXI CGGCCG 2 cut(s) 798, 949
Eco130I CCWWGG 3 cut(s) 117, 420, 1184
Eco31I GGTCTC 1 cut(s) 276
Eco32I GATATC 1 cut(s) 1358
Eco47I GGWCC 1 cut(s) 845
Eco52I CGGCCG 2 cut(s) 798, 949
Eco81I CCTNAGG 1 cut(s) 1438
EcoRI GAATTC 1 cut(s) 1259
EcoRII CCWGG 2 cut(s) 490, 1318
EcoRV GATATC 1 cut(s) 1358
EcoT14I CCWWGG 3 cut(s) 117, 420, 1184
EcoT22I ATGCAT 1 cut(s) 392
ErhI CCWWGG 3 cut(s) 117, 420, 1184
FalI AAGNNNNNCTT 6 cut(s) 453, 485, 1158, 1190, 1239, 1271
FaqI GGGAC 2 cut(s) 65, 1291
FauI CCCGC 1 cut(s) 161
FbaI TGATCA 1 cut(s) 193
FblI GTMKAC 2 cut(s) 990, 1180
FokI GGATG 4 cut(s) 143, 194, 374, 1420
GlaI GCGC 1 cut(s) 1083
GsaI CCCAGC 1 cut(s) 567
HhaI GCGC 1 cut(s) 1084
Hin6I GCGC 1 cut(s) 1082
HinP1I GCGC 1 cut(s) 1082
HincII GTYRAC 3 cut(s) 768, 991, 1181
HindII GTYRAC 3 cut(s) 768, 991, 1181
HindIII AAGCTT 1 cut(s) 748
HinfI GANTC 5 cut(s) 776, 807, 929, 1106, 1341
HphI GGTGA 2 cut(s) 771, 1310
Hpy166II GTNNAC 7 cut(s) 768, 941, 991, 1034, 1181, 1350, 1395
Hpy188I TCNGA 3 cut(s) 98, 1265, 1381
Hpy188III TCNNGA 7 cut(s) 179, 197, 290, 703, 755, 965, 1045
Hpy8I GTNNAC 7 cut(s) 768, 941, 991, 1034, 1181, 1350, 1395
HpyAV CCTTC 4 cut(s) 797, 845, 1132, 1241
HpyCH4III ACNGT 3 cut(s) 553, 1207, 1290
HpyCH4IV ACGT 4 cut(s) 78, 546, 669, 723
HpyF10VI GCNNNNNNNGC 7 cut(s) 501, 515, 602, 747, 797, 1068, 1331
HpyF3I CTNAG 3 cut(s) 177, 470, 1438
HpySE526I ACGT 4 cut(s) 78, 546, 669, 723
HspAI GCGC 1 cut(s) 1082
Ksp22I TGATCA 1 cut(s) 193
Kzo9I GATC 5 cut(s) 193, 199, 625, 912, 1137
LmnI GCTCC 2 cut(s) 11, 1327
Lsp1109I GCAGC 8 cut(s) 387, 437, 521, 589, 592, 826, 893, 1416
LweI GCATC 3 cut(s) 163, 165, 352
MaeII ACGT 4 cut(s) 78, 546, 669, 723
MaeIII GTNAC 4 cut(s) 445, 547, 724, 1075
MalI GATC 5 cut(s) 195, 201, 627, 914, 1139
MboI GATC 5 cut(s) 193, 199, 625, 912, 1137
MboII GAAGA 1 cut(s) 889
MflI RGATCY 1 cut(s) 1137
MhlI GDGCHC 2 cut(s) 8, 1036
MluCI AATT 6 cut(s) 265, 527, 574, 694, 1027, 1259
MlyI GAGTC 3 cut(s) 923, 1100, 1350
MmeI TCCRAC 1 cut(s) 339
MnlI CCTC 7 cut(s) 93, 151, 380, 586, 706, 1259, 1375
Mph1103I ATGCAT 1 cut(s) 392
MseI TTAA 3 cut(s) 210, 645, 1471
MslI CAYNNNNRTG 4 cut(s) 161, 395, 815, 1310
MspR9I CCNGG 2 cut(s) 492, 1320
MvaI CCWGG 2 cut(s) 492, 1320
MvnI CGCG 2 cut(s) 162, 756
MwoI GCNNNNNNNGC 7 cut(s) 501, 515, 602, 747, 797, 1068, 1331
NcoI CCATGG 2 cut(s) 117, 420
NdeII GATC 5 cut(s) 193, 199, 625, 912, 1137
NlaIV GGNNCC 2 cut(s) 409, 1317
NmeAIII GCCGAG 3 cut(s) 351, 647, 1364
NmuCI GTSAC 2 cut(s) 445, 1075
NruI TCGCGA 1 cut(s) 756
NsiI ATGCAT 1 cut(s) 392
NspI RCATGY 3 cut(s) 390, 478, 947
PagI TCATGA 2 cut(s) 196, 702
PciI ACATGT 1 cut(s) 943
PcsI WCGNNNNNNNCGW 1 cut(s) 675
PfeI GAWTC 2 cut(s) 776, 807
PflMI CCANNNNNTGG 1 cut(s) 136
PleI GAGTC 3 cut(s) 923, 1100, 1349
PpsI GAGTC 3 cut(s) 923, 1100, 1349
PscI ACATGT 1 cut(s) 943
PsiI TTATAA 1 cut(s) 1238
Psp1406I AACGTT 1 cut(s) 546
Psp6I CCWGG 2 cut(s) 490, 1318
PspFI CCCAGC 1 cut(s) 563
PspGI CCWGG 2 cut(s) 490, 1318
PspN4I GGNNCC 2 cut(s) 409, 1317
PspPI GGNCC 2 cut(s) 845, 1316
PstI CTGCAG 1 cut(s) 844
PsuI RGATCY 1 cut(s) 1137
RruI TCGCGA 1 cut(s) 756
RsaI GTAC 3 cut(s) 486, 942, 1304
RsaNI GTAC 3 cut(s) 485, 941, 1303
RseI CAYNNNNRTG 4 cut(s) 161, 395, 815, 1310
SalI GTCGAC 2 cut(s) 989, 1179
SaqAI TTAA 3 cut(s) 210, 645, 1471
Sau3AI GATC 5 cut(s) 193, 199, 625, 912, 1137
Sau96I GGNCC 2 cut(s) 845, 1316
SchI GAGTC 3 cut(s) 923, 1100, 1350
ScrFI CCNGG 2 cut(s) 492, 1320
SduI GDGCHC 2 cut(s) 8, 1036
SfaNI GCATC 3 cut(s) 163, 165, 352
SfcI CTRYAG 1 cut(s) 840
SinI GGWCC 1 cut(s) 845
SmiMI CAYNNNNRTG 4 cut(s) 161, 395, 815, 1310
Sse9I AATT 6 cut(s) 265, 527, 574, 694, 1027, 1259
SsiI CCGC 8 cut(s) 154, 160, 279, 502, 791, 879, 1325, 1400
SspI AATATT 3 cut(s) 214, 416, 1196
StyD4I CCNGG 2 cut(s) 490, 1318
StyI CCWWGG 3 cut(s) 117, 420, 1184
TaaI ACNGT 3 cut(s) 553, 1207, 1290
TaiI ACGT 4 cut(s) 81, 549, 672, 726
TaqI TCGA 5 cut(s) 202, 678, 964, 990, 1180
TasI AATT 6 cut(s) 265, 527, 574, 694, 1027, 1259
TatI WGTACW 2 cut(s) 940, 1302
TauI GCSGC 2 cut(s) 504, 1403
TfiI GAWTC 2 cut(s) 776, 807
Tru1I TTAA 3 cut(s) 210, 645, 1471
Tru9I TTAA 3 cut(s) 210, 645, 1471
TscAI CASTG 7 cut(s) 96, 922, 985, 991, 1018, 1212, 1293
TseFI GTSAC 2 cut(s) 445, 1075
TseI GCWGC 8 cut(s) 375, 425, 509, 602, 605, 839, 906, 1429
Tsp45I GTSAC 2 cut(s) 445, 1075
TspDTI ATGAA 9 cut(s) 7, 16, 270, 275, 799, 985, 1147, 1201, 1322
TspGWI ACGGA 1 cut(s) 1216
TspRI CASTG 7 cut(s) 96, 922, 985, 991, 1018, 1212, 1293
Van91I CCANNNNNTGG 1 cut(s) 136
VneI GTGCAC 1 cut(s) 1032
VpaK11BI GGWCC 1 cut(s) 845
XapI RAATTY 4 cut(s) 527, 574, 694, 1259
XceI RCATGY 3 cut(s) 390, 478, 947
XcmI CCANNNNNNNNNTGG 1 cut(s) 418
XmiI GTMKAC 2 cut(s) 990, 1180
Zsp2I ATGCAT 1 cut(s) 392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.