Rroxscaffold_6G00409950

pectinesterase pectinesterase inhibitor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000006
OG0001935
Physical Location & Seq
Reverse (-)
32435155 .. 32436963
1809 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_6G00409950.1

Sequence Viewer

Length: 1569 bp
ATGAAGTTCTTGTATCATTCCAATATTCTTTTATTCATTCATTTCTCTGCTCTGTTCACTAACCCACATGCTAGCCCTAGTTATACTATTGGCTCCTCTCGCATCACAAAAGTTTCATTGCCTTTGTTCAAAGACTCATTGGTGTCGACCATGGAACTTGTACAAAATGTGACCATGCTCCAAATCCATGATGATGATGGTGATCCATATGTCAATGTTACTATTCAACATTGTGCAAATTTCCTTGCCGAAATTGCTGGAGTCTTGAATTGGATCCTTTCTTCGATTAATCAGGAATACACTAAAGCTTCATCTGGTGGTTATAATCAATCTTATACAACAGGTGATGTTATTTCCCATGCGAGGAAGTTGTTGAATGCTAGTCATGGCAGCCAAGAAACATGTATGGAAGTGCTCAATGGTACCAAACACTCCGTGGTTGCAGGGAACCTCAAACAAGTGACCGCATCTATCTATGAAATCTTTGATATGTTGCAGATGCTACAAGGTAGTCCTGATTTTTCCAAGGCTACTGGTGCTATACCAATTGGTTCGACTGGACTTGATGACTTCAAGATTACGCTAAAACCAAACGTCACTGTTTCACAAGATGGGAAGGGAGATTTCAAGCTAATAATGGATGCGATCGCGGCTGCACCAAGTCACTCGACTAAGTACTTTGTGATACTTGTTAAGAAAGGGGTTTACAACGAATATGTGAACATCAACAAAACAAAATCGAATATGATCCTGATTGGAGAGGGTAAGGATGCTACTATCATTTCCGGGAGTAAAAGCGCAGGCAGTGGTTTGACAACATTTGATACAGCCACATTTGCTGTTAGAGCCCAAGGATTCGTTGCAATTGACATAGGGTTCGAGAACACAGCAGGTCAAAATAATACGCAAGCGGTCGCACTTCTGTCCGGCGGCGACCACTCTGTCTTCTATCGGTGCAAGATAACAGGAAATCAAGACACATTGCTCGTGCAAGCCGGCCGCCAGTTCTTCCGAGAATGCCAAATCACCGGCACTGTCGACTTCATCTTTGGCTACGGCACTGTCGTCTTCCAAAAATGCAACATTTACATCAAGAAAAACCAGATTGGCGGCACCAGTGTCATCGCTGCCCACGGCCGTAACTCCTCAACAGACTCATCTGGCTTTTCATTCCAATTCTGCAATATCGATGGAGACCGTAAGGTGTCCGCTGTGGAGCCAACTCATGAAGGCGCGTACCTCGGTCGGAGTTGGGGCATTTATGCACGAACAGTGTTCATGCAGTCGTCTATAAGTGATGTTCTAAGGCCGGAGGGTTGGCTTCAACGGCATCTAGATCCTGTAGACAAACTATATTTCGGTGAGTACCAGAATTCTGGACCTGGTGCGGCGCTTGGAGGCCGGGTGAAGTGGCCTGGTTTTCATAAGATGAGCGCATCTGATGCTGATAAATTTACAGTGGCCAACTTTATTGATGGGAATTCATGGCTAGCTTCGTTAGGTATCCCATACACACAGCGATTGTATCCGTCGGCCGATCCACCGGCCAATCCGCCAATGGCAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
PMEI Pectinesterase

Protein Analysis

522

Amino Acids

56.64

Weight (kDa)

6.92

Isoelectric Point (pI)

26.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pectinesterase PF01095 198 - 494 2.2e-111 Pectinesterase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 324
AasI GACNNNNNNGTC 1 cut(s) 941
Acc36I ACCTGC 1 cut(s) 881
Acc65I GGTACC 1 cut(s) 422
AccB1I GGYRCC 2 cut(s) 422, 1112
AccI GTMKAC 3 cut(s) 146, 1038, 1344
AccII CGCG 2 cut(s) 650, 1235
AciI CCGC 9 cut(s) 465, 650, 911, 930, 1000, 1110, 1209, 1388, 1553
AclWI GGATC 6 cut(s) 197, 268, 281, 742, 1331, 1532
AcoI YGGCCR 5 cut(s) 997, 1135, 1461, 1533, 1545
AcsI RAATTY 4 cut(s) 238, 1372, 1451, 1480
AdeI CACNNNGTG 1 cut(s) 436
AfaI GTAC 5 cut(s) 162, 424, 677, 1238, 1367
AfiI CCNNNNNNNGG 1 cut(s) 363
AflIII ACRYGT 1 cut(s) 401
AgsI TTSAA 7 cut(s) 130, 227, 268, 376, 574, 628, 1325
AjnI CCWGG 2 cut(s) 1381, 1414
AluBI AGCT 4 cut(s) 308, 631, 1493, 1565
AluI AGCT 4 cut(s) 308, 631, 1493, 1565
Alw21I GWGCWC 1 cut(s) 417
Alw26I GTCTC 1 cut(s) 1188
AlwI GGATC 6 cut(s) 197, 268, 281, 742, 1331, 1532
AoxI GGCC 8 cut(s) 997, 1135, 1307, 1399, 1412, 1461, 1533, 1545
ApeKI GCWGC 4 cut(s) 390, 653, 1127, 1562
ApoI RAATTY 4 cut(s) 238, 1372, 1451, 1480
ArsI GACNNNNNNTTYG 4 cut(s) 860, 892, 1031, 1063
AseI ATTAAT 1 cut(s) 288
AsiSI GCGATCGC 1 cut(s) 648
Asp718I GGTACC 1 cut(s) 422
AspLEI GCGC 4 cut(s) 800, 1235, 1393, 1436
AspS9I GGNCC 1 cut(s) 1379
AsuC2I CCSGG 2 cut(s) 787, 1403
AsuHPI GGTGA 5 cut(s) 212, 356, 1018, 1373, 1417
AsuNHI GCTAGC 2 cut(s) 71, 1489
AvaII GGWCC 1 cut(s) 1379
BalI TGGCCA 1 cut(s) 1463
BamHI GGATCC 1 cut(s) 273
BanI GGYRCC 2 cut(s) 422, 1112
BanII GRGCYC 1 cut(s) 850
BauI CACGAG 1 cut(s) 986
BbsI GAAGAC 2 cut(s) 937, 1060
Bbv12I GWGCWC 1 cut(s) 417
BbvI GCAGC 3 cut(s) 402, 640, 1114
BccI CCATC 4 cut(s) 191, 605, 1184, 1469
BceAI ACGGC 4 cut(s) 1072, 1122, 1150, 1343
BciT130I CCWGG 2 cut(s) 1383, 1416
BciVI GTATCC 2 cut(s) 1514, 1536
BcnI CCSGG 2 cut(s) 787, 1403
BcoDI GTCTC 1 cut(s) 1188
BfaI CTAG 5 cut(s) 72, 78, 381, 1334, 1490
BfmI CTRYAG 1 cut(s) 1341
BfoI RGCGCY 1 cut(s) 1394
BfuAI ACCTGC 1 cut(s) 881
BfuI GTATCC 2 cut(s) 1514, 1536
BisI GCNGC 9 cut(s) 391, 651, 654, 931, 1000, 1111, 1128, 1389, 1563
BlsI GCNGC 9 cut(s) 392, 652, 655, 932, 1001, 1112, 1129, 1390, 1564
BmcAI AGTACT 1 cut(s) 677
Bme1390I CCNGG 4 cut(s) 787, 1383, 1403, 1416
Bme18I GGWCC 1 cut(s) 1379
BmgT120I GGNCC 1 cut(s) 1379
BmiI GGNNCC 6 cut(s) 94, 275, 424, 449, 1114, 1218
BmrFI CCNGG 4 cut(s) 787, 1383, 1403, 1416
BmsI GCATC 8 cut(s) 111, 476, 489, 631, 760, 1339, 1432, 1445
BmtI GCTAGC 2 cut(s) 75, 1493
BpiI GAAGAC 2 cut(s) 937, 1060
BpmI CTGGAG 1 cut(s) 279
BpuMI CCSGG 2 cut(s) 787, 1403
Bsa29I ATCGAT 1 cut(s) 1188
BsaBI GATNNNNATC 1 cut(s) 201
BsaI GGTCTC 1 cut(s) 1188
BsaJI CCNNGG 6 cut(s) 150, 435, 525, 850, 1132, 1240
BsaXI ACNNNNNCTCC 2 cut(s) 1389, 1419
Bsc4I CCNNNNNNNGG 1 cut(s) 363
Bse118I RCCGGY 3 cut(s) 995, 1028, 1543
Bse1I ACTGG 4 cut(s) 538, 562, 1003, 1116
Bse3DI GCAATG 2 cut(s) 116, 980
Bse8I GATNNNNATC 1 cut(s) 201
BseBI CCWGG 2 cut(s) 1383, 1416
BseCI ATCGAT 1 cut(s) 1188
BseDI CCNNGG 6 cut(s) 150, 435, 525, 850, 1132, 1240
BseGI GGATG 2 cut(s) 646, 775
BseJI GATNNNNATC 1 cut(s) 201
BseLI CCNNNNNNNGG 1 cut(s) 363
BseMI GCAATG 2 cut(s) 116, 980
BseNI ACTGG 4 cut(s) 538, 562, 1003, 1116
BseRI GAGGAG 2 cut(s) 85, 1135
BseX3I CGGCCG 3 cut(s) 997, 1135, 1533
BseXI GCAGC 3 cut(s) 402, 640, 1114
BsgI GTGCAG 1 cut(s) 639
Bsh1236I CGCG 2 cut(s) 650, 1235
Bsh1285I CGRYCG 6 cut(s) 648, 915, 1000, 1138, 1246, 1536
BshFI GGCC 8 cut(s) 999, 1137, 1309, 1401, 1414, 1463, 1535, 1547
BshNI GGYRCC 2 cut(s) 422, 1112
BshVI ATCGAT 1 cut(s) 1188
BsiEI CGRYCG 6 cut(s) 648, 915, 1000, 1138, 1246, 1536
BsiHKAI GWGCWC 1 cut(s) 417
BsiSI CCGG 7 cut(s) 786, 927, 996, 1029, 1310, 1402, 1544
BslI CCNNNNNNNGG 1 cut(s) 363
BsmAI GTCTC 1 cut(s) 1188
BsmI GAATGC 2 cut(s) 382, 1022
BsnI GGCC 8 cut(s) 999, 1137, 1309, 1401, 1414, 1463, 1535, 1547
Bso31I GGTCTC 1 cut(s) 1188
Bsp1286I GDGCHC 2 cut(s) 417, 850
Bsp1407I TGTACA 1 cut(s) 160
Bsp143I GATC 6 cut(s) 202, 273, 645, 747, 1336, 1537
Bsp19I CCATGG 1 cut(s) 150
BspACI CCGC 9 cut(s) 465, 650, 911, 930, 1000, 1110, 1209, 1388, 1553
BspANI GGCC 8 cut(s) 999, 1137, 1309, 1401, 1414, 1463, 1535, 1547
BspDI ATCGAT 1 cut(s) 1188
BspFNI CGCG 2 cut(s) 650, 1235
BspHI TCATGA 1 cut(s) 1225
BspLI GGNNCC 6 cut(s) 94, 275, 424, 449, 1114, 1218
BspMI ACCTGC 1 cut(s) 881
BspOI GCTAGC 2 cut(s) 75, 1493
BspPI GGATC 6 cut(s) 197, 268, 281, 742, 1331, 1532
BspT107I GGYRCC 2 cut(s) 422, 1112
BspTNI GGTCTC 1 cut(s) 1188
BsrDI GCAATG 2 cut(s) 116, 980
BsrFI RCCGGY 3 cut(s) 995, 1028, 1543
BsrGI TGTACA 1 cut(s) 160
BsrI ACTGG 4 cut(s) 538, 562, 1003, 1116
BssAI RCCGGY 3 cut(s) 995, 1028, 1543
BssECI CCNNGG 6 cut(s) 150, 435, 525, 850, 1132, 1240
BssMI GATC 6 cut(s) 202, 273, 645, 747, 1336, 1537
BssSI CACGAG 1 cut(s) 986
BssT1I CCWWGG 3 cut(s) 150, 525, 850
Bst2BI CACGAG 1 cut(s) 986
Bst2UI CCWGG 2 cut(s) 1383, 1416
Bst4CI ACNGT 6 cut(s) 601, 1036, 1063, 1199, 1273, 1459
BstAPI GCANNNNNTGC 1 cut(s) 1442
BstAUI TGTACA 1 cut(s) 160
BstC8I GCNNGC 6 cut(s) 73, 802, 909, 993, 997, 1491
BstDEI CTNAG 2 cut(s) 672, 1304
BstDSI CCRYGG 3 cut(s) 150, 435, 1132
BstF5I GGATG 2 cut(s) 646, 775
BstFNI CGCG 2 cut(s) 650, 1235
BstH2I RGCGCY 1 cut(s) 1394
BstHHI GCGC 4 cut(s) 800, 1235, 1393, 1436
BstKTI GATC 6 cut(s) 205, 276, 648, 750, 1339, 1540
BstMAI GTCTC 1 cut(s) 1188
BstMBI GATC 6 cut(s) 202, 273, 645, 747, 1336, 1537
BstMCI CGRYCG 6 cut(s) 648, 915, 1000, 1138, 1246, 1536
BstMWI GCNNNNNNNGC 8 cut(s) 99, 254, 536, 650, 836, 845, 1327, 1442
BstNI CCWGG 2 cut(s) 1383, 1416
BstNSI RCATGY 2 cut(s) 71, 405
BstSCI CCNGG 4 cut(s) 785, 1381, 1401, 1414
BstSFI CTRYAG 1 cut(s) 1341
BstUI CGCG 2 cut(s) 650, 1235
BstV1I GCAGC 3 cut(s) 402, 640, 1114
BstV2I GAAGAC 2 cut(s) 937, 1060
BstX2I RGATCY 2 cut(s) 273, 1336
BstXI CCANNNNNNTGG 1 cut(s) 1376
BstYI RGATCY 2 cut(s) 273, 1336
BstZI CGGCCG 3 cut(s) 997, 1135, 1533
Bsu15I ATCGAT 1 cut(s) 1188
BsuI GTATCC 2 cut(s) 1514, 1536
BsuRI GGCC 8 cut(s) 999, 1137, 1309, 1401, 1414, 1463, 1535, 1547
BsuTUI ATCGAT 1 cut(s) 1188
BtgI CCRYGG 3 cut(s) 150, 435, 1132
BtgZI GCGATG 1 cut(s) 1108
BtsCI GGATG 2 cut(s) 646, 775
BtsI GCAGTG 1 cut(s) 811
BtsIMutI CAGTG 7 cut(s) 597, 811, 1032, 1059, 1123, 1278, 1464
BveI ACCTGC 1 cut(s) 881
Cac8I GCNNGC 6 cut(s) 73, 802, 909, 993, 997, 1491
CciI TCATGA 1 cut(s) 1225
CfoI GCGC 4 cut(s) 800, 1235, 1393, 1436
Cfr10I RCCGGY 3 cut(s) 995, 1028, 1543
Cfr13I GGNCC 1 cut(s) 1379
ClaI ATCGAT 1 cut(s) 1188
CsiI ACCWGGT 1 cut(s) 1381
Csp6I GTAC 5 cut(s) 161, 423, 676, 1237, 1366
CviQI GTAC 5 cut(s) 161, 423, 676, 1237, 1366
DdeI CTNAG 2 cut(s) 672, 1304
DpnI GATC 6 cut(s) 204, 275, 647, 749, 1338, 1539
DpnII GATC 6 cut(s) 202, 273, 645, 747, 1336, 1537
DraIII CACNNNGTG 1 cut(s) 436
DrdI GACNNNNNNGTC 1 cut(s) 941
DseDI GACNNNNNNGTC 1 cut(s) 941
EaeI YGGCCR 5 cut(s) 997, 1135, 1461, 1533, 1545
EagI CGGCCG 3 cut(s) 997, 1135, 1533
EciI GGCGGA 1 cut(s) 1542
EclXI CGGCCG 3 cut(s) 997, 1135, 1533
Eco130I CCWWGG 3 cut(s) 150, 525, 850
Eco24I GRGCYC 1 cut(s) 850
Eco31I GGTCTC 1 cut(s) 1188
Eco47I GGWCC 1 cut(s) 1379
Eco52I CGGCCG 3 cut(s) 997, 1135, 1533
EcoRI GAATTC 2 cut(s) 1372, 1480
EcoRII CCWGG 2 cut(s) 1381, 1414
EcoT14I CCWWGG 3 cut(s) 150, 525, 850
EcoT38I GRGCYC 1 cut(s) 850
ErhI CCWWGG 3 cut(s) 150, 525, 850
FauNDI CATATG 1 cut(s) 208
FblI GTMKAC 3 cut(s) 146, 1038, 1344
Fnu4HI GCNGC 9 cut(s) 391, 651, 654, 931, 1000, 1111, 1128, 1389, 1563
FokI GGATG 2 cut(s) 653, 782
FriOI GRGCYC 1 cut(s) 850
Fsp4HI GCNGC 9 cut(s) 391, 651, 654, 931, 1000, 1111, 1128, 1389, 1563
FspBI CTAG 5 cut(s) 72, 78, 381, 1334, 1490
GlaI GCGC 4 cut(s) 799, 1234, 1392, 1435
GluI GCNGC 9 cut(s) 391, 651, 654, 931, 1000, 1111, 1128, 1389, 1563
GsuI CTGGAG 1 cut(s) 279
HaeII RGCGCY 1 cut(s) 1394
HaeIII GGCC 8 cut(s) 999, 1137, 1309, 1401, 1414, 1463, 1535, 1547
HapII CCGG 7 cut(s) 786, 927, 996, 1029, 1310, 1402, 1544
HhaI GCGC 4 cut(s) 800, 1235, 1393, 1436
Hin6I GCGC 4 cut(s) 798, 1233, 1391, 1434
HinP1I GCGC 4 cut(s) 798, 1233, 1391, 1434
HincII GTYRAC 2 cut(s) 147, 1039
HindII GTYRAC 2 cut(s) 147, 1039
HindIII AAGCTT 1 cut(s) 306
HinfI GANTC 4 cut(s) 134, 261, 855, 1154
HpaII CCGG 7 cut(s) 786, 927, 996, 1029, 1310, 1402, 1544
HphI GGTGA 5 cut(s) 212, 356, 1018, 1373, 1417
Hpy166II GTNNAC 6 cut(s) 57, 147, 706, 721, 1039, 1345
Hpy188I TCNGA 3 cut(s) 1013, 1248, 1441
Hpy8I GTNNAC 6 cut(s) 57, 147, 706, 721, 1039, 1345
Hpy99I CGWCG 1 cut(s) 1534
HpyAV CCTTC 2 cut(s) 610, 1223
HpyCH4III ACNGT 6 cut(s) 601, 1036, 1063, 1199, 1273, 1459
HpyCH4IV ACGT 1 cut(s) 594
HpyF10VI GCNNNNNNNGC 8 cut(s) 99, 254, 536, 650, 836, 845, 1327, 1442
HpyF3I CTNAG 2 cut(s) 672, 1304
HpySE526I ACGT 1 cut(s) 594
HspAI GCGC 4 cut(s) 798, 1233, 1391, 1434
KpnI GGTACC 1 cut(s) 426
KroI GCCGGC 1 cut(s) 995
KroNI GCCGGC 1 cut(s) 997
Kzo9I GATC 6 cut(s) 202, 273, 645, 747, 1336, 1537
LmnI GCTCC 3 cut(s) 98, 183, 1216
Lsp1109I GCAGC 3 cut(s) 402, 640, 1114
LweI GCATC 8 cut(s) 111, 476, 489, 631, 760, 1339, 1432, 1445
MabI ACCWGGT 1 cut(s) 1381
MaeI CTAG 5 cut(s) 72, 78, 381, 1334, 1490
MaeII ACGT 1 cut(s) 594
MaeIII GTNAC 6 cut(s) 169, 217, 460, 595, 662, 1139
MalI GATC 6 cut(s) 204, 275, 647, 749, 1338, 1539
MboI GATC 6 cut(s) 202, 273, 645, 747, 1336, 1537
MboII GAAGA 4 cut(s) 273, 937, 1000, 1060
MfeI CAATTG 2 cut(s) 546, 864
MflI RGATCY 2 cut(s) 273, 1336
MhlI GDGCHC 2 cut(s) 417, 850
MlsI TGGCCA 1 cut(s) 1463
MluCI AATT 9 cut(s) 238, 252, 268, 546, 864, 1175, 1372, 1451, 1480
MluNI TGGCCA 1 cut(s) 1463
MlyI GAGTC 3 cut(s) 128, 270, 1148
MmeI TCCRAC 1 cut(s) 1226
MnlI CCTC 8 cut(s) 106, 357, 461, 754, 1156, 1250, 1306, 1391
Mox20I TGGCCA 1 cut(s) 1463
MroNI GCCGGC 1 cut(s) 995
MscI TGGCCA 1 cut(s) 1463
MseI TTAA 3 cut(s) 288, 693, 1567
MslI CAYNNNNRTG 1 cut(s) 192
Msp20I TGGCCA 1 cut(s) 1463
MspA1I CMGCKG 1 cut(s) 1211
MspI CCGG 7 cut(s) 786, 927, 996, 1029, 1310, 1402, 1544
MspR9I CCNGG 4 cut(s) 787, 1383, 1403, 1416
MunI CAATTG 2 cut(s) 546, 864
Mva1269I GAATGC 2 cut(s) 382, 1022
MvaI CCWGG 2 cut(s) 1383, 1416
MvnI CGCG 2 cut(s) 650, 1235
MwoI GCNNNNNNNGC 8 cut(s) 99, 254, 536, 650, 836, 845, 1327, 1442
NaeI GCCGGC 1 cut(s) 997
NciI CCSGG 2 cut(s) 787, 1403
NcoI CCATGG 1 cut(s) 150
NdeI CATATG 1 cut(s) 208
NdeII GATC 6 cut(s) 202, 273, 645, 747, 1336, 1537
NgoMIV GCCGGC 1 cut(s) 995
NheI GCTAGC 2 cut(s) 71, 1489
NlaIV GGNNCC 6 cut(s) 94, 275, 424, 449, 1114, 1218
NmuCI GTSAC 4 cut(s) 169, 460, 595, 662
NspI RCATGY 2 cut(s) 71, 405
PagI TCATGA 1 cut(s) 1225
PciI ACATGT 1 cut(s) 401
PcsI WCGNNNNNNNCGW 1 cut(s) 1062
PctI GAATGC 2 cut(s) 382, 1022
PdiI GCCGGC 1 cut(s) 997
PfeI GAWTC 1 cut(s) 855
PfoI TCCNGGA 1 cut(s) 785
PkrI GCNGC 9 cut(s) 392, 652, 655, 932, 1001, 1112, 1129, 1390, 1564
Ple19I CGATCG 1 cut(s) 648
PleI GAGTC 3 cut(s) 128, 269, 1148
PpsI GAGTC 3 cut(s) 128, 269, 1148
PscI ACATGT 1 cut(s) 401
PshBI ATTAAT 1 cut(s) 288
PsiI TTATAA 1 cut(s) 324
Psp6I CCWGG 2 cut(s) 1381, 1414
PspGI CCWGG 2 cut(s) 1381, 1414
PspN4I GGNNCC 6 cut(s) 94, 275, 424, 449, 1114, 1218
PspPI GGNCC 1 cut(s) 1379
PsuI RGATCY 2 cut(s) 273, 1336
PvuI CGATCG 1 cut(s) 648
RgaI GCGATCGC 1 cut(s) 648
RsaI GTAC 5 cut(s) 162, 424, 677, 1238, 1367
RsaNI GTAC 5 cut(s) 161, 423, 676, 1237, 1366
RseI CAYNNNNRTG 1 cut(s) 192
SalI GTCGAC 2 cut(s) 145, 1037
SaqAI TTAA 3 cut(s) 288, 693, 1567
SatI GCNGC 9 cut(s) 391, 651, 654, 931, 1000, 1111, 1128, 1389, 1563
Sau3AI GATC 6 cut(s) 202, 273, 645, 747, 1336, 1537
Sau96I GGNCC 1 cut(s) 1379
ScaI AGTACT 1 cut(s) 677
SchI GAGTC 3 cut(s) 128, 270, 1148
ScrFI CCNGG 4 cut(s) 787, 1383, 1403, 1416
SduI GDGCHC 2 cut(s) 417, 850
SexAI ACCWGGT 1 cut(s) 1381
SfaAI GCGATCGC 1 cut(s) 648
SfaNI GCATC 8 cut(s) 111, 476, 489, 631, 760, 1339, 1432, 1445
SfcI CTRYAG 1 cut(s) 1341
SgfI GCGATCGC 1 cut(s) 648
SinI GGWCC 1 cut(s) 1379
SmiMI CAYNNNNRTG 1 cut(s) 192
Sse9I AATT 9 cut(s) 238, 252, 268, 546, 864, 1175, 1372, 1451, 1480
SsiI CCGC 9 cut(s) 465, 650, 911, 930, 1000, 1110, 1209, 1388, 1553
SspI AATATT 1 cut(s) 25
SspMI CTAG 5 cut(s) 72, 78, 381, 1334, 1490
StyD4I CCNGG 4 cut(s) 785, 1381, 1401, 1414
StyI CCWWGG 3 cut(s) 150, 525, 850
TaaI ACNGT 6 cut(s) 601, 1036, 1063, 1199, 1273, 1459
TaiI ACGT 1 cut(s) 597
TaqI TCGA 8 cut(s) 146, 284, 554, 668, 740, 879, 1038, 1188
TaqII GACCGA 1 cut(s) 1232
TasI AATT 9 cut(s) 238, 252, 268, 546, 864, 1175, 1372, 1451, 1480
TatI WGTACW 2 cut(s) 160, 675
TauI GCSGC 5 cut(s) 653, 933, 1002, 1113, 1391
TfiI GAWTC 1 cut(s) 855
Tru1I TTAA 3 cut(s) 288, 693, 1567
Tru9I TTAA 3 cut(s) 288, 693, 1567
TscAI CASTG 7 cut(s) 604, 811, 1039, 1066, 1123, 1278, 1464
TseFI GTSAC 4 cut(s) 169, 460, 595, 662
TseI GCWGC 4 cut(s) 390, 653, 1127, 1562
Tsp45I GTSAC 4 cut(s) 169, 460, 595, 662
TspGWI ACGGA 2 cut(s) 424, 1518
TspRI CASTG 7 cut(s) 604, 811, 1039, 1066, 1123, 1278, 1464
VpaK11BI GGWCC 1 cut(s) 1379
VspI ATTAAT 1 cut(s) 288
XapI RAATTY 4 cut(s) 238, 1372, 1451, 1480
XbaI TCTAGA 1 cut(s) 1333
XceI RCATGY 2 cut(s) 71, 405
XcmI CCANNNNNNNNNTGG 3 cut(s) 194, 433, 1555
XmiI GTMKAC 3 cut(s) 146, 1038, 1344
XspI CTAG 5 cut(s) 72, 78, 381, 1334, 1490
ZrmI AGTACT 1 cut(s) 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.