Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr5

Orthogroup ID

OG0001935

Physical Location & Seq

Genomic Coordinates Forward (+)

47831398 .. 47833484

Gene Structure 2087 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000025712

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGAAGCTCTCCGATCGTTTCTATCTTTTCTTCACTTGCTTCATTGCTCTATCCATTAACTCGCATGCTAGGTCTAGTTCTAATATTGGCTCATCCCGCTTCGTTAAAGTCCCCTTGCCTTTGTTCAGAGAGTCATTGGTGTCTACCATGGAACTTGTTCAAAGTGTGGCCTCTACCATGTCGCTAATCCATGGTGACATTGATGATAACGATGATGATGGTCCAAATCTCAATGTTTCTCTTCCACATTGTGCATATTTGCTTGGTGAAACTGCTGGTGTTATGAATTGGACCCTTTCGGCGATTAATCAGCAATATACTCAAGGTGATGCCATTTCCCATGCGAGGACACTGTTGAGTGGTAGTCTTGGCAGCCAAGAAATGTGTACGCAAATGCTTGAAGGTACCAAACATTTCATGGTTTCAGGGAGCCTCAAACAAGTGACCACATCCATATATGATATCCTAGATATGTTGCAAGTGCCACGATTTGGTCCTGATTTTTCGAGGGCTACTGGTGCTTCTTTACTTGGTTCGACTAGATTCGACGGCGTTAAGACTTGGCAAAAACCAAACGTCATTGTTTCACAAGACGGAAAGGGAGATTTCAAGCTAATAATGGACGCGATTAAGGAAGCACCAAGTCACTCCACAAATTACTTTGTGATACTTGTTAAGAGAGGAGTTTACCATGAATACGTGGACATTGATGAGACAAAATCGAATCTGGTCTTGATGGGAGAGGGCATGGATGTTACTACTATTTCCGGAAGTAAAAGCGCAAGGGATGGTCAACAAACATTTGATTCAGCCACATTTGCCGTTAGGGCCCTAGGATTCATTGCAATGGACATAGGGTTTGAGAACACTGCCGGACAAGAAAAATTGCAGGCTTTGGCAGTTCTCTCCAGCGGCGACCGCTCCGCCTTTTACCGATGCAAGTTGACCGGAAATCAAGACACATTGCTAGTGCAAGCTGGCCGCCAATTCTTCCGAGAATGCAAAATCACGGGCACCGTTGACTTCATCTTTGGCTATGGCAGTGCTGTCTTTCAAAAATGCGACATTTACATCAAGAAAAATCCAATAGGCGGAACCAGCGTCATCGCGGCCCATGGCGGTAACAACCCATCAGACCCATCAGGCTTTTCATTCCACCTCTGCACCATCACCGGAGACACCAATGCGGTCATTAAAGACTCGACTCGCAACGGCGGGTACCTCGGTCGGAATTGGGGGGTTTATGCACGAACAGTGTTCATGCATTCGACCATAAGCAATGTTCTACGGCCGGAAGGTTGGCTCCAGTGGCAAGGCAAGGGTGTGGACAAGGTGTATTTCGGGGAGTACATGAACAATGGCCCGGGTGCAAACACTGCAAACCGGGTGAGCTGGCCTGGTTGTCATGAGAAGATGAACCGATCTGAGGCTGATAGATTTACAGTGGCAAAGCTTATTGACGGACAGTCATGGCTGTCAACTGTAGGTATCCCACACACAATGGGATTGGATGGATCCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00040 ko01100 map00040 map01100

Pfam Domains

Protein Families

PMEI Pectinesterase

Protein Analysis

507

Amino Acids

55.25

Weight (kDa)

6.46

Isoelectric Point (pI)

26.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PMEI	PF04043	38 - 147	9.2e-06	Plant invertase/pectin methylesterase inhibitor
Pectinesterase	PF01095	192 - 488	2.8e-109	Pectinesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001935)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g17310 FvH4_6g17430
malus_domestica	MD01G1105400.v1.1 MD03G1086400.v1.1 MD04G1225800.v1.1 MD06G1080700.v1.1
prunus_persica	Prupe.2G210700_v2.0.a1 Prupe.2G216300_v2.0.a1 Prupe.6G344600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr1g0362901 RchiOBHm_Chr1g0362911 RchiOBHm_Chr3g0450671 RchiOBHm_Chr3g0471441
rosa_laevigata	RLG00000024178 RLG00000025712
rosa_multiflora	Rmu_co8224930.1_g000001 Rmu_co8324923.1_g000001 Rmu_sc0000078.1_g000035 Rmu_sc0001502.1_g000007 Rmu_sc0001502.1_g000008 Rmu_sc0006582.1_g000010
rosa_roxburghii	Rroxscaffold_4G00293660 Rroxscaffold_6G00409950 Rroxscaffold_6G00428330
rosa_rugosa	Rorug01G0302100 Rorug01G0302100 Rorug02G0629500 Rorug03G0117800
rosa_samantha	Rh1AG311400 Rh1AG311500 Rh1BG274600 Rh1CG291800 Rh1DG305300 Rh3AG030300 Rh3AG167600 Rh3BG030600 Rh3BG030700 Rh3BG193100 Rh3CG029500 Rh3CG183500 Rh3DG030200 Rh3DG030300 Rh3DG182400
rosa_wichuraiana	Rw1G027600 Rw3G002330 Rw3G015790

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	2 cut(s)	404, 1218
AccB1I	GGYRCC	3 cut(s)	404, 1013, 1218
AccB7I	CCANNNNNTGG	1 cut(s)	491
AccBSI	CCGCTC	1 cut(s)	921
AccI	GTMKAC	1 cut(s)	143
AccII	CGCG	2 cut(s)	626, 1109
AccIII	TCCGGA	1 cut(s)	767
AclWI	GGATC	1 cut(s)	1509
AcoI	YGGCCR	2 cut(s)	979, 1289
AdeI	CACNNNGTG	1 cut(s)	251
AfaI	GTAC	4 cut(s)	388, 406, 1220, 1349
AfiI	CCNNNNNNNGG	4 cut(s)	345, 491, 1091, 1426
AgsI	TTSAA	4 cut(s)	161, 401, 610, 1055
AhdI	GACNNNNNGTC	1 cut(s)	1465
AjnI	CCWGG	1 cut(s)	1396
AluBI	AGCT	5 cut(s)	7, 613, 977, 1392, 1453
AluI	AGCT	5 cut(s)	7, 613, 977, 1392, 1453
Alw26I	GTCTC	2 cut(s)	707, 1170
AlwI	GGATC	1 cut(s)	1509
Ama87I	CYCGRG	1 cut(s)	1363
Aor13HI	TCCGGA	1 cut(s)	767
AoxI	GGCC	7 cut(s)	168, 828, 979, 1110, 1289, 1360, 1394
ApaI	GGGCCC	1 cut(s)	832
ApeKI	GCWGC	1 cut(s)	372
ArsI	GACNNNNNNTTYG	4 cut(s)	842, 874, 1013, 1045
AseI	ATTAAT	1 cut(s)	306
Asp700I	GAANNNNTTC	1 cut(s)	156
Asp718I	GGTACC	2 cut(s)	404, 1218
AspA2I	CCTAGG	1 cut(s)	832
AspLEI	GCGC	1 cut(s)	782
AspS9I	GGNCC	7 cut(s)	221, 291, 494, 828, 829, 1111, 1361
AsuC2I	CCSGG	3 cut(s)	1364, 1365, 1385
AsuHPI	GGTGA	5 cut(s)	206, 278, 338, 1162, 1399
AvaI	CYCGRG	1 cut(s)	1363
AvaII	GGWCC	3 cut(s)	221, 291, 494
AvrII	CCTAGG	1 cut(s)	832
BaeGI	GKGCMC	2 cut(s)	832, 1016
BaeI	ACNNNNGTAYC	2 cut(s)	1210, 1243
BamHI	GGATCC	1 cut(s)	1514
BanI	GGYRCC	3 cut(s)	404, 1013, 1218
BanII	GRGCYC	1 cut(s)	832
BbvI	GCAGC	1 cut(s)	384
BccI	CCATC	7 cut(s)	212, 730, 782, 1138, 1147, 1175, 1505
BceAI	ACGGC	4 cut(s)	565, 806, 1228, 1304
BciT130I	CCWGG	1 cut(s)	1398
BciVI	GTATCC	1 cut(s)	1499
BcnI	CCSGG	3 cut(s)	1364, 1365, 1385
BcoDI	GTCTC	2 cut(s)	707, 1170
BfaI	CTAG	6 cut(s)	69, 75, 467, 540, 833, 968
BfmI	CTRYAG	1 cut(s)	1482
BfuI	GTATCC	1 cut(s)	1499
BglI	GCCNNNNNGGC	1 cut(s)	827
BisI	GCNGC	4 cut(s)	373, 913, 982, 1110
BlnI	CCTAGG	1 cut(s)	832
BlsI	GCNGC	4 cut(s)	374, 914, 983, 1111
Bme1390I	CCNGG	4 cut(s)	1364, 1365, 1385, 1398
Bme18I	GGWCC	3 cut(s)	221, 291, 494
BmeRI	GACNNNNNGTC	1 cut(s)	1465
BmeT110I	CYCGRG	1 cut(s)	1363
BmgT120I	GGNCC	7 cut(s)	221, 291, 494, 828, 829, 1111, 1361
BmiI	GGNNCC	9 cut(s)	293, 406, 431, 830, 1015, 1096, 1220, 1304, 1516
BmrFI	CCNGG	4 cut(s)	1364, 1365, 1385, 1398
BmsI	GCATC	2 cut(s)	319, 926
BpmI	CTGGAG	2 cut(s)	892, 1289
BpuEI	CTTGAG	1 cut(s)	306
BpuMI	CCSGG	3 cut(s)	1364, 1365, 1385
BsaAI	YACGTR	1 cut(s)	700
BsaJI	CCNNGG	6 cut(s)	147, 190, 832, 1114, 1222, 1363
BsaWI	WCCGGW	3 cut(s)	767, 947, 1172
Bsc4I	CCNNNNNNNGG	4 cut(s)	345, 491, 1091, 1426
Bse1I	ACTGG	2 cut(s)	520, 1306
Bse3DI	GCAATG	5 cut(s)	42, 840, 852, 962, 1285
BseAI	TCCGGA	1 cut(s)	767
BseBI	CCWGG	1 cut(s)	1398
BseDI	CCNNGG	6 cut(s)	147, 190, 832, 1114, 1222, 1363
BseGI	GGATG	5 cut(s)	92, 449, 757, 793, 1516
BseLI	CCNNNNNNNGG	4 cut(s)	345, 491, 1091, 1426
BseMI	GCAATG	5 cut(s)	42, 840, 852, 962, 1285
BseMII	CTCAG	1 cut(s)	1416
BseNI	ACTGG	2 cut(s)	520, 1306
BseRI	GAGGAG	1 cut(s)	696
BseSI	GKGCMC	2 cut(s)	832, 1016
BseX3I	CGGCCG	1 cut(s)	1289
BseXI	GCAGC	1 cut(s)	384
BsgI	GTGCAG	1 cut(s)	1147
Bsh1236I	CGCG	2 cut(s)	626, 1109
Bsh1285I	CGRYCG	4 cut(s)	16, 919, 1228, 1292
BshFI	GGCC	7 cut(s)	170, 830, 981, 1112, 1291, 1362, 1396
BshNI	GGYRCC	3 cut(s)	404, 1013, 1218
BsiEI	CGRYCG	4 cut(s)	16, 919, 1228, 1292
BsiHKCI	CYCGRG	1 cut(s)	1363
BsiSI	CCGG	7 cut(s)	768, 873, 948, 1173, 1292, 1364, 1384
BslFI	GGGAC	1 cut(s)	95
BslI	CCNNNNNNNGG	4 cut(s)	345, 491, 1091, 1426
BsmAI	GTCTC	2 cut(s)	707, 1170
BsmFI	GGGAC	1 cut(s)	95
BsmI	GAATGC	2 cut(s)	1004, 1264
BsnI	GGCC	7 cut(s)	170, 830, 981, 1112, 1291, 1362, 1396
BsoBI	CYCGRG	1 cut(s)	1363
Bsp120I	GGGCCC	1 cut(s)	828
Bsp1286I	GDGCHC	2 cut(s)	832, 1016
Bsp13I	TCCGGA	1 cut(s)	767
Bsp143I	GATC	3 cut(s)	13, 1421, 1514
Bsp19I	CCATGG	3 cut(s)	147, 190, 1114
BspANI	GGCC	7 cut(s)	170, 830, 981, 1112, 1291, 1362, 1396
BspCNI	CTCAG	1 cut(s)	1417
BspEI	TCCGGA	1 cut(s)	767
BspFNI	CGCG	2 cut(s)	626, 1109
BspHI	TCATGA	1 cut(s)	1405
BspLI	GGNNCC	9 cut(s)	293, 406, 431, 830, 1015, 1096, 1220, 1304, 1516
BspPI	GGATC	1 cut(s)	1509
BspT107I	GGYRCC	3 cut(s)	404, 1013, 1218
BsrBI	CCGCTC	1 cut(s)	921
BsrDI	GCAATG	5 cut(s)	42, 840, 852, 962, 1285
BsrI	ACTGG	2 cut(s)	520, 1306
BssECI	CCNNGG	6 cut(s)	147, 190, 832, 1114, 1222, 1363
BssMI	GATC	3 cut(s)	13, 1421, 1514
BssT1I	CCWWGG	4 cut(s)	147, 190, 832, 1114
Bst2UI	CCWGG	1 cut(s)	1398
Bst4CI	ACNGT	6 cut(s)	354, 1018, 1255, 1444, 1467, 1483
Bst6I	CTCTTC	1 cut(s)	246
BstAPI	GCANNNNNTGC	1 cut(s)	1376
BstBAI	YACGTR	1 cut(s)	700
BstC8I	GCNNGC	5 cut(s)	66, 891, 975, 979, 1394
BstDEI	CTNAG	1 cut(s)	1425
BstDSI	CCRYGG	3 cut(s)	147, 190, 1114
BstF5I	GGATG	5 cut(s)	92, 449, 757, 793, 1516
BstFNI	CGCG	2 cut(s)	626, 1109
BstHHI	GCGC	1 cut(s)	782
BstKTI	GATC	3 cut(s)	16, 1424, 1517
BstMAI	GTCTC	2 cut(s)	707, 1170
BstMBI	GATC	3 cut(s)	13, 1421, 1514
BstMCI	CGRYCG	4 cut(s)	16, 919, 1228, 1292
BstMWI	GCNNNNNNNGC	8 cut(s)	96, 518, 818, 827, 918, 1098, 1309, 1376
BstNI	CCWGG	1 cut(s)	1398
BstNSI	RCATGY	1 cut(s)	68
BstSCI	CCNGG	4 cut(s)	1362, 1363, 1383, 1396
BstSFI	CTRYAG	1 cut(s)	1482
BstSLI	GKGCMC	2 cut(s)	832, 1016
BstUI	CGCG	2 cut(s)	626, 1109
BstV1I	GCAGC	1 cut(s)	384
BstX2I	RGATCY	1 cut(s)	1514
BstYI	RGATCY	1 cut(s)	1514
BstZI	CGGCCG	1 cut(s)	1289
BsuI	GTATCC	1 cut(s)	1499
BsuRI	GGCC	7 cut(s)	170, 830, 981, 1112, 1291, 1362, 1396
BtgI	CCRYGG	3 cut(s)	147, 190, 1114
BtgZI	GCGATG	1 cut(s)	1090
BtsCI	GGATG	5 cut(s)	92, 449, 757, 793, 1516
BtsI	GCAGTG	3 cut(s)	867, 1048, 1374
BtsIMutI	CAGTG	7 cut(s)	350, 867, 1048, 1260, 1313, 1374, 1449
Cac8I	GCNNGC	5 cut(s)	66, 891, 975, 979, 1394
CciI	TCATGA	1 cut(s)	1405
CfoI	GCGC	1 cut(s)	782
Cfr13I	GGNCC	7 cut(s)	221, 291, 494, 828, 829, 1111, 1361
Cfr9I	CCCGGG	1 cut(s)	1363
CseI	GACGC	2 cut(s)	632, 1090
Csp6I	GTAC	4 cut(s)	387, 405, 1219, 1348
CviQI	GTAC	4 cut(s)	387, 405, 1219, 1348
DdeI	CTNAG	1 cut(s)	1425
DpnI	GATC	3 cut(s)	15, 1423, 1516
DpnII	GATC	3 cut(s)	13, 1421, 1514
DraIII	CACNNNGTG	1 cut(s)	251
DriI	GACNNNNNGTC	1 cut(s)	1465
EaeI	YGGCCR	2 cut(s)	979, 1289
EagI	CGGCCG	1 cut(s)	1289
Eam1104I	CTCTTC	1 cut(s)	246
Eam1105I	GACNNNNNGTC	1 cut(s)	1465
EarI	CTCTTC	1 cut(s)	246
EciI	GGCGGA	2 cut(s)	913, 1107
EclXI	CGGCCG	1 cut(s)	1289
Eco130I	CCWWGG	4 cut(s)	147, 190, 832, 1114
Eco24I	GRGCYC	1 cut(s)	832
Eco32I	GATATC	1 cut(s)	463
Eco47I	GGWCC	3 cut(s)	221, 291, 494
Eco52I	CGGCCG	1 cut(s)	1289
Eco88I	CYCGRG	1 cut(s)	1363
EcoO109I	RGGNCCY	2 cut(s)	828, 829
EcoRII	CCWGG	1 cut(s)	1396
EcoRV	GATATC	1 cut(s)	463
EcoT14I	CCWWGG	4 cut(s)	147, 190, 832, 1114
EcoT22I	ATGCAT	1 cut(s)	1266
EcoT38I	GRGCYC	1 cut(s)	832
ErhI	CCWWGG	4 cut(s)	147, 190, 832, 1114
FaqI	GGGAC	1 cut(s)	95
FauI	CCCGC	2 cut(s)	104, 1208
FblI	GTMKAC	1 cut(s)	143
Fnu4HI	GCNGC	4 cut(s)	373, 913, 982, 1110
FokI	GGATG	4 cut(s)	79, 436, 764, 800
FriOI	GRGCYC	1 cut(s)	832
Fsp4HI	GCNGC	4 cut(s)	373, 913, 982, 1110
FspBI	CTAG	6 cut(s)	69, 75, 467, 540, 833, 968
GlaI	GCGC	1 cut(s)	781
GluI	GCNGC	4 cut(s)	373, 913, 982, 1110
GsuI	CTGGAG	2 cut(s)	892, 1289
HaeIII	GGCC	7 cut(s)	170, 830, 981, 1112, 1291, 1362, 1396
HapII	CCGG	7 cut(s)	768, 873, 948, 1173, 1292, 1364, 1384
HgaI	GACGC	2 cut(s)	632, 1090
HhaI	GCGC	1 cut(s)	782
Hin6I	GCGC	1 cut(s)	780
HinP1I	GCGC	1 cut(s)	780
HincII	GTYRAC	4 cut(s)	794, 945, 1021, 1479
HindII	GTYRAC	4 cut(s)	794, 945, 1021, 1479
HindIII	AAGCTT	1 cut(s)	1451
HinfI	GANTC	7 cut(s)	131, 543, 724, 806, 837, 1199, 1204
HpaII	CCGG	7 cut(s)	768, 873, 948, 1173, 1292, 1364, 1384
HphI	GGTGA	5 cut(s)	206, 278, 338, 1162, 1399
Hpy166II	GTNNAC	9 cut(s)	144, 387, 688, 703, 794, 945, 1021, 1327, 1479
Hpy188I	TCNGA	6 cut(s)	13, 128, 995, 1135, 1230, 1426
Hpy188III	TCNNGA	6 cut(s)	497, 733, 768, 956, 1075, 1406
Hpy8I	GTNNAC	9 cut(s)	144, 387, 688, 703, 794, 945, 1021, 1327, 1479
Hpy99I	CGWCG	1 cut(s)	551
HpyAV	CCTTC	2 cut(s)	395, 1289
HpyCH4III	ACNGT	6 cut(s)	354, 1018, 1255, 1444, 1467, 1483
HpyCH4IV	ACGT	2 cut(s)	576, 699
HpyF10VI	GCNNNNNNNGC	8 cut(s)	96, 518, 818, 827, 918, 1098, 1309, 1376
HpyF3I	CTNAG	1 cut(s)	1425
HpySE526I	ACGT	2 cut(s)	576, 699
HspAI	GCGC	1 cut(s)	780
Kpn2I	TCCGGA	1 cut(s)	767
KpnI	GGTACC	2 cut(s)	408, 1222
Kzo9I	GATC	3 cut(s)	13, 1421, 1514
LmnI	GCTCC	3 cut(s)	429, 926, 1308
Lsp1109I	GCAGC	1 cut(s)	384
LweI	GCATC	2 cut(s)	319, 926
MaeI	CTAG	6 cut(s)	69, 75, 467, 540, 833, 968
MaeII	ACGT	2 cut(s)	576, 699
MaeIII	GTNAC	5 cut(s)	194, 442, 644, 754, 1121
MalI	GATC	3 cut(s)	15, 1423, 1516
MbiI	CCGCTC	1 cut(s)	921
MboI	GATC	3 cut(s)	13, 1421, 1514
MboII	GAAGA	4 cut(s)	22, 233, 982, 1423
MflI	RGATCY	1 cut(s)	1514
MhlI	GDGCHC	2 cut(s)	832, 1016
MluCI	AATT	5 cut(s)	286, 655, 884, 986, 1231
MlyI	GAGTC	3 cut(s)	140, 1193, 1198
MmeI	TCCRAC	1 cut(s)	1208
MnlI	CCTC	9 cut(s)	181, 339, 443, 501, 674, 736, 1169, 1232, 1420
Mph1103I	ATGCAT	1 cut(s)	1266
MroI	TCCGGA	1 cut(s)	767
MroXI	GAANNNNTTC	1 cut(s)	156
MseI	TTAA	7 cut(s)	57, 105, 306, 555, 630, 675, 1194
MslI	CAYNNNNRTG	1 cut(s)	845
MspA1I	CMGCKG	1 cut(s)	912
MspI	CCGG	7 cut(s)	768, 873, 948, 1173, 1292, 1364, 1384
MspR9I	CCNGG	4 cut(s)	1364, 1365, 1385, 1398
Mva1269I	GAATGC	2 cut(s)	1004, 1264
MvaI	CCWGG	1 cut(s)	1398
MvnI	CGCG	2 cut(s)	626, 1109
MwoI	GCNNNNNNNGC	8 cut(s)	96, 518, 818, 827, 918, 1098, 1309, 1376
NciI	CCSGG	3 cut(s)	1364, 1365, 1385
NcoI	CCATGG	3 cut(s)	147, 190, 1114
NdeII	GATC	3 cut(s)	13, 1421, 1514
NlaIV	GGNNCC	9 cut(s)	293, 406, 431, 830, 1015, 1096, 1220, 1304, 1516
NmuCI	GTSAC	3 cut(s)	194, 442, 644
NsiI	ATGCAT	1 cut(s)	1266
NspI	RCATGY	1 cut(s)	68
PaeI	GCATGC	1 cut(s)	68
PagI	TCATGA	1 cut(s)	1405
PctI	GAATGC	2 cut(s)	1004, 1264
PdmI	GAANNNNTTC	1 cut(s)	156
PfeI	GAWTC	4 cut(s)	543, 724, 806, 837
PflMI	CCANNNNNTGG	1 cut(s)	491
PkrI	GCNGC	4 cut(s)	374, 914, 983, 1111
Ple19I	CGATCG	1 cut(s)	16
PleI	GAGTC	3 cut(s)	139, 1193, 1198
PpsI	GAGTC	3 cut(s)	139, 1193, 1198
Ppu21I	YACGTR	1 cut(s)	700
PshBI	ATTAAT	1 cut(s)	306
Psp6I	CCWGG	1 cut(s)	1396
PspGI	CCWGG	1 cut(s)	1396
PspN4I	GGNNCC	9 cut(s)	293, 406, 431, 830, 1015, 1096, 1220, 1304, 1516
PspOMI	GGGCCC	1 cut(s)	828
PspPI	GGNCC	7 cut(s)	221, 291, 494, 828, 829, 1111, 1361
PsuI	RGATCY	1 cut(s)	1514
PvuI	CGATCG	1 cut(s)	16
RsaI	GTAC	4 cut(s)	388, 406, 1220, 1349
RsaNI	GTAC	4 cut(s)	387, 405, 1219, 1348
RseI	CAYNNNNRTG	1 cut(s)	845
SaqAI	TTAA	7 cut(s)	57, 105, 306, 555, 630, 675, 1194
SatI	GCNGC	4 cut(s)	373, 913, 982, 1110
Sau3AI	GATC	3 cut(s)	13, 1421, 1514
Sau96I	GGNCC	7 cut(s)	221, 291, 494, 828, 829, 1111, 1361
SchI	GAGTC	3 cut(s)	140, 1193, 1198
ScrFI	CCNGG	4 cut(s)	1364, 1365, 1385, 1398
SduI	GDGCHC	2 cut(s)	832, 1016
SfaNI	GCATC	2 cut(s)	319, 926
SfcI	CTRYAG	1 cut(s)	1482
SinI	GGWCC	3 cut(s)	221, 291, 494
SmaI	CCCGGG	1 cut(s)	1365
SmiMI	CAYNNNNRTG	1 cut(s)	845
SmlI	CTYRAG	1 cut(s)	321
SmoI	CTYRAG	1 cut(s)	321
SphI	GCATGC	1 cut(s)	68
Sse9I	AATT	5 cut(s)	286, 655, 884, 986, 1231
SspI	AATATT	1 cut(s)	85
SspMI	CTAG	6 cut(s)	69, 75, 467, 540, 833, 968
StyD4I	CCNGG	4 cut(s)	1362, 1363, 1383, 1396
StyI	CCWWGG	4 cut(s)	147, 190, 832, 1114
TaaI	ACNGT	6 cut(s)	354, 1018, 1255, 1444, 1467, 1483
TaiI	ACGT	2 cut(s)	579, 702
TaqI	TCGA	6 cut(s)	506, 536, 546, 722, 1202, 1268
TaqII	GACCGA	1 cut(s)	1214
TasI	AATT	5 cut(s)	286, 655, 884, 986, 1231
TatI	WGTACW	1 cut(s)	1347
TauI	GCSGC	3 cut(s)	915, 984, 1112
TfiI	GAWTC	4 cut(s)	543, 724, 806, 837
Tru1I	TTAA	7 cut(s)	57, 105, 306, 555, 630, 675, 1194
Tru9I	TTAA	7 cut(s)	57, 105, 306, 555, 630, 675, 1194
TscAI	CASTG	7 cut(s)	357, 874, 1048, 1260, 1313, 1381, 1449
TseFI	GTSAC	3 cut(s)	194, 442, 644
TseI	GCWGC	1 cut(s)	372
Tsp45I	GTSAC	3 cut(s)	194, 442, 644
TspGWI	ACGGA	2 cut(s)	609, 1476
TspMI	CCCGGG	1 cut(s)	1363
TspRI	CASTG	7 cut(s)	357, 874, 1048, 1260, 1313, 1381, 1449
Van91I	CCANNNNNTGG	1 cut(s)	491
VpaK11BI	GGWCC	3 cut(s)	221, 291, 494
VspI	ATTAAT	1 cut(s)	306
XceI	RCATGY	1 cut(s)	68
XcmI	CCANNNNNNNNNTGG	1 cut(s)	415
XmaI	CCCGGG	1 cut(s)	1363
XmaJI	CCTAGG	1 cut(s)	832
XmiI	GTMKAC	1 cut(s)	143
XmnI	GAANNNNTTC	1 cut(s)	156
XspI	CTAG	6 cut(s)	69, 75, 467, 540, 833, 968
Zsp2I	ATGCAT	1 cut(s)	1266

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.