Prupe.2G245100_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
26259487 .. 26263264
3778 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G245100.2

Sequence Viewer

Length: 1329 bp
ATGTCGGAATCGTCCTCAACCCTCTGCGAGCTTCTCATCCAATTATCGGAGCCAATCTCCGAATCTCTGAGCAAAGCTCAGTGCACTCAACCAGAGGGCAACAACGTCTCCTTGAAAGCCCTACTGGAACCTCTCCTCCCTCACAAACAACCTCCACCAAGCCCTAACTTCAACGACACTCAACTCCACTCCTCAATCAGGGACTTCACCTTCGCCTGTGCCTTACTCTCCTCCTCTCAATCCTCTATCCACGACCTCCTCTCATGGATCCCCAAACACCTCTCGGCCGCTGCAGACTTGGCGTTTCTCAAACTTTCAAAAGCATATTCCATGGCTTACAGTAAAAAGAATAACGCGAAGATTTCTGAATTGGGATTAAATTGTGGTTCGGTTCCTGAGGAGAAGAGGTTACTGATAGAATTGATGCCTGAGGTTCTTCCATTGTTGAAGAACAGGATTAAGGAGAGCTCCATCGATAAATCGGAGGATTGCGATGAGGTCTCAGCGGCCTCAGCGAGAGTGCCCGTTGGCTTTGCCATTGCGGCTGCTTATCAGTTTAGGTGGTTTGTTACACAGATTGATTATCCTCATTTGGGAAAGTTGTCTGCTTTGGTTATTCCTTGTGCTTTAACGGCTCTCGATCACTGGTCCCCTGAGATCAAAGGGCAGGGCATGCTTAGCTTTATACATATTGCGAAAAATGTGTATGCTGCTGAGCTTGGTTGGTATCAAGATGTGATTCTTGATGCATGCTGCCAGAATATTGCTTCTAGTGATGAGATATGGCATCTTGTGGTGGAGATGTCCGTACTTATTGTGACTTGTACCCAGCAAAGTAATCCTCGTAGTGCATGGTTTGATAGGATGCTAAACGAGATGTTAAGTCACTTGGAGCGCCAACCTAGGAACAAGGAGCGCCGTGTTGCATGGCTTCGTCATATAGAGCCACTTTTTAATGGTGTTGGTCTGGTGTTACTAGCTCATTTCAGGCGCATTTTCCCTCTTTTCTTTCAGTGGATGCATGCTGATGATGACGAGACTGTTTTACTGGTTCTCAAACAGATTGAAACAATTATAAAGTTAACGTGGATTAGGAACACACAGTATGTGGAAAGGTTGGTGGATGAACTTGCTGCTTTGTACAAGGAAGCAGCATTGAAAAGGTCTCGTGAAGAAATTAGAAATCTTGTTATTCGGATACTGATCCTGCTCCACCAATGCAAAGGAATGCAGTTTGAAACAGTCTGGGGCAAGCACAGAGATGATCCAAACTTGGCAAGCATTGTTCCCTCTTTGGGTGAAACAAAAACAACAATGGTTGCCCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

443

Amino Acids

49.99

Weight (kDa)

6.29

Isoelectric Point (pI)

54.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1076
AccII CGCG 1 cut(s) 356
AciI CCGC 3 cut(s) 288, 506, 542
AclWI GGATC 4 cut(s) 262, 275, 1198, 1259
AcoI YGGCCR 1 cut(s) 285
AfaI GTAC 3 cut(s) 810, 826, 1142
AfiI CCNNNNNNNGG 4 cut(s) 46, 198, 593, 1295
AgsI TTSAA 7 cut(s) 115, 172, 318, 448, 1067, 1159, 1238
AloI GAACNNNNNNTCC 2 cut(s) 120, 152
AluBI AGCT 6 cut(s) 31, 77, 468, 681, 718, 980
AluI AGCT 6 cut(s) 31, 77, 468, 681, 718, 980
Alw21I GWGCWC 2 cut(s) 86, 470
Alw26I GTCTC 4 cut(s) 112, 505, 1031, 1170
Alw44I GTGCAC 1 cut(s) 82
AlwI GGATC 4 cut(s) 262, 275, 1198, 1259
AoxI GGCC 2 cut(s) 285, 507
ApaLI GTGCAC 1 cut(s) 82
ApeKI GCWGC 6 cut(s) 290, 545, 710, 753, 1133, 1151
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AspA2I CCTAGG 1 cut(s) 902
AspLEI GCGC 3 cut(s) 897, 918, 993
AspS9I GGNCC 1 cut(s) 648
AsuHPI GGTGA 2 cut(s) 199, 1310
AvaII GGWCC 1 cut(s) 648
AvrII CCTAGG 1 cut(s) 902
AxyI CCTNAGG 2 cut(s) 396, 429
BaeGI GKGCMC 2 cut(s) 86, 525
BamHI GGATCC 1 cut(s) 267
BanII GRGCYC 1 cut(s) 470
BauI CACGAG 1 cut(s) 1167
Bbv12I GWGCWC 2 cut(s) 86, 470
BbvCI CCTCAGC 1 cut(s) 511
BbvI GCAGC 6 cut(s) 277, 532, 697, 740, 1120, 1163
BccI CCATC 1 cut(s) 479
BceAI ACGGC 2 cut(s) 648, 903
BciVI GTATCC 1 cut(s) 1191
BcoDI GTCTC 4 cut(s) 112, 505, 1031, 1170
BfaI CTAG 3 cut(s) 771, 903, 977
BfmI CTRYAG 1 cut(s) 291
BfoI RGCGCY 2 cut(s) 898, 919
BfuI GTATCC 1 cut(s) 1191
BglI GCCNNNNNGGC 1 cut(s) 542
BisI GCNGC 9 cut(s) 288, 291, 507, 543, 546, 711, 754, 1134, 1152
BlnI CCTAGG 1 cut(s) 902
BlpI GCTNAGC 2 cut(s) 677, 714
BlsI GCNGC 9 cut(s) 289, 292, 508, 544, 547, 712, 755, 1135, 1153
Bme18I GGWCC 1 cut(s) 648
BmgT120I GGNCC 1 cut(s) 648
BmiI GGNNCC 5 cut(s) 51, 129, 269, 393, 650
BmsI GCATC 5 cut(s) 414, 736, 796, 855, 1008
BplI GAGNNNNNCTC 4 cut(s) 41, 73, 61, 93
Bpu10I CCTNAGC 1 cut(s) 511
Bpu1102I GCTNAGC 2 cut(s) 677, 714
Bsa29I ATCGAT 1 cut(s) 474
BsaBI GATNNNNATC 1 cut(s) 1202
BsaI GGTCTC 2 cut(s) 505, 1170
BsaJI CCNNGG 2 cut(s) 330, 902
BsaXI ACNNNNNCTCC 6 cut(s) 92, 120, 122, 150, 392, 422
Bsc4I CCNNNNNNNGG 4 cut(s) 46, 198, 593, 1295
Bse1I ACTGG 3 cut(s) 129, 650, 1053
Bse21I CCTNAGG 2 cut(s) 396, 429
Bse3DI GCAATG 1 cut(s) 537
Bse8I GATNNNNATC 1 cut(s) 1202
BseCI ATCGAT 1 cut(s) 474
BseDI CCNNGG 2 cut(s) 330, 902
BseGI GGATG 4 cut(s) 36, 870, 1023, 1129
BseJI GATNNNNATC 1 cut(s) 1202
BseLI CCNNNNNNNGG 4 cut(s) 46, 198, 593, 1295
BseMI GCAATG 1 cut(s) 537
BseMII CTCAG 8 cut(s) 59, 92, 387, 420, 516, 525, 645, 705
BseNI ACTGG 3 cut(s) 129, 650, 1053
BseRI GAGGAG 6 cut(s) 125, 181, 220, 223, 248, 413
BseSI GKGCMC 2 cut(s) 86, 525
BseX3I CGGCCG 1 cut(s) 285
BseXI GCAGC 6 cut(s) 277, 532, 697, 740, 1120, 1163
BseYI CCCAGC 1 cut(s) 828
Bsh1236I CGCG 1 cut(s) 356
Bsh1285I CGRYCG 1 cut(s) 288
BshFI GGCC 2 cut(s) 287, 509
BshVI ATCGAT 1 cut(s) 474
BsiEI CGRYCG 1 cut(s) 288
BsiHKAI GWGCWC 2 cut(s) 86, 470
BslFI GGGAC 2 cut(s) 215, 634
BslI CCNNNNNNNGG 4 cut(s) 46, 198, 593, 1295
BsmAI GTCTC 4 cut(s) 112, 505, 1031, 1170
BsmBI CGTCTC 1 cut(s) 112
BsmFI GGGAC 2 cut(s) 215, 634
BsmI GAATGC 1 cut(s) 1233
BsnI GGCC 2 cut(s) 287, 509
Bso31I GGTCTC 2 cut(s) 505, 1170
Bsp1286I GDGCHC 3 cut(s) 86, 470, 525
Bsp1407I TGTACA 1 cut(s) 1140
Bsp143I GATC 5 cut(s) 267, 640, 657, 1203, 1264
Bsp1720I GCTNAGC 2 cut(s) 677, 714
Bsp19I CCATGG 1 cut(s) 330
BspACI CCGC 3 cut(s) 288, 506, 542
BspANI GGCC 2 cut(s) 287, 509
BspCNI CTCAG 8 cut(s) 60, 91, 388, 421, 515, 524, 646, 706
BspDI ATCGAT 1 cut(s) 474
BspFNI CGCG 1 cut(s) 356
BspLI GGNNCC 5 cut(s) 51, 129, 269, 393, 650
BspMAI CTGCAG 1 cut(s) 295
BspPI GGATC 4 cut(s) 262, 275, 1198, 1259
BspTNI GGTCTC 2 cut(s) 505, 1170
BsrDI GCAATG 1 cut(s) 537
BsrGI TGTACA 1 cut(s) 1140
BsrI ACTGG 3 cut(s) 129, 650, 1053
BssECI CCNNGG 2 cut(s) 330, 902
BssMI GATC 5 cut(s) 267, 640, 657, 1203, 1264
BssSI CACGAG 1 cut(s) 1167
BssT1I CCWWGG 2 cut(s) 330, 902
Bst2BI CACGAG 1 cut(s) 1167
Bst4CI ACNGT 4 cut(s) 341, 1042, 1104, 1243
Bst6I CTCTTC 1 cut(s) 398
BstAPI GCANNNNNTGC 1 cut(s) 673
BstAUI TGTACA 1 cut(s) 1140
BstC8I GCNNGC 6 cut(s) 29, 674, 751, 1023, 1253, 1279
BstDEI CTNAG 9 cut(s) 68, 78, 396, 429, 502, 511, 654, 677, 714
BstDSI CCRYGG 1 cut(s) 330
BstENI CCTNNNNNAGG 1 cut(s) 196
BstF5I GGATG 4 cut(s) 36, 870, 1023, 1129
BstFNI CGCG 1 cut(s) 356
BstH2I RGCGCY 2 cut(s) 898, 919
BstHHI GCGC 3 cut(s) 897, 918, 993
BstKTI GATC 5 cut(s) 270, 643, 660, 1206, 1267
BstMAI GTCTC 4 cut(s) 112, 505, 1031, 1170
BstMBI GATC 5 cut(s) 267, 640, 657, 1203, 1264
BstMCI CGRYCG 1 cut(s) 288
BstMWI GCNNNNNNNGC 6 cut(s) 299, 512, 542, 632, 673, 678
BstNSI RCATGY 3 cut(s) 676, 753, 1025
BstSFI CTRYAG 1 cut(s) 291
BstSLI GKGCMC 2 cut(s) 86, 525
BstUI CGCG 1 cut(s) 356
BstV1I GCAGC 6 cut(s) 277, 532, 697, 740, 1120, 1163
BstX2I RGATCY 1 cut(s) 267
BstYI RGATCY 1 cut(s) 267
BstZI CGGCCG 1 cut(s) 285
Bsu15I ATCGAT 1 cut(s) 474
Bsu36I CCTNAGG 2 cut(s) 396, 429
BsuI GTATCC 1 cut(s) 1191
BsuRI GGCC 2 cut(s) 287, 509
BsuTUI ATCGAT 1 cut(s) 474
BtgI CCRYGG 1 cut(s) 330
BtgZI GCGATG 1 cut(s) 507
BtsCI GGATG 4 cut(s) 36, 870, 1023, 1129
BtsIMutI CAGTG 3 cut(s) 86, 643, 1019
Cac8I GCNNGC 6 cut(s) 29, 674, 751, 1023, 1253, 1279
CfoI GCGC 3 cut(s) 897, 918, 993
Cfr13I GGNCC 1 cut(s) 648
ClaI ATCGAT 1 cut(s) 474
Csp6I GTAC 3 cut(s) 809, 825, 1141
CviAII CATG 7 cut(s) 264, 331, 673, 750, 852, 927, 1022
CviQI GTAC 3 cut(s) 809, 825, 1141
DdeI CTNAG 9 cut(s) 68, 78, 396, 429, 502, 511, 654, 677, 714
DpnI GATC 5 cut(s) 269, 642, 659, 1205, 1266
DpnII GATC 5 cut(s) 267, 640, 657, 1203, 1264
EaeI YGGCCR 1 cut(s) 285
EagI CGGCCG 1 cut(s) 285
Eam1104I CTCTTC 1 cut(s) 398
EarI CTCTTC 1 cut(s) 398
Ecl136II GAGCTC 1 cut(s) 468
EclXI CGGCCG 1 cut(s) 285
Eco130I CCWWGG 2 cut(s) 330, 902
Eco24I GRGCYC 1 cut(s) 470
Eco31I GGTCTC 2 cut(s) 505, 1170
Eco47I GGWCC 1 cut(s) 648
Eco52I CGGCCG 1 cut(s) 285
Eco53kI GAGCTC 1 cut(s) 468
Eco81I CCTNAGG 2 cut(s) 396, 429
EcoICRI GAGCTC 1 cut(s) 468
EcoNI CCTNNNNNAGG 1 cut(s) 196
EcoT14I CCWWGG 2 cut(s) 330, 902
EcoT22I ATGCAT 2 cut(s) 751, 1023
EcoT38I GRGCYC 1 cut(s) 470
ErhI CCWWGG 2 cut(s) 330, 902
Esp3I CGTCTC 1 cut(s) 112
FaeI CATG 7 cut(s) 267, 334, 676, 753, 855, 930, 1025
FaqI GGGAC 2 cut(s) 215, 634
FatI CATG 7 cut(s) 263, 330, 672, 749, 851, 926, 1021
Fnu4HI GCNGC 9 cut(s) 288, 291, 507, 543, 546, 711, 754, 1134, 1152
FokI GGATG 4 cut(s) 23, 877, 1030, 1136
FriOI GRGCYC 1 cut(s) 470
Fsp4HI GCNGC 9 cut(s) 288, 291, 507, 543, 546, 711, 754, 1134, 1152
FspBI CTAG 3 cut(s) 771, 903, 977
GlaI GCGC 3 cut(s) 896, 917, 992
GluI GCNGC 9 cut(s) 288, 291, 507, 543, 546, 711, 754, 1134, 1152
GsaI CCCAGC 1 cut(s) 832
HaeII RGCGCY 2 cut(s) 898, 919
HaeIII GGCC 2 cut(s) 287, 509
HhaI GCGC 3 cut(s) 897, 918, 993
Hin1II CATG 7 cut(s) 267, 334, 676, 753, 855, 930, 1025
Hin6I GCGC 3 cut(s) 895, 916, 991
HinP1I GCGC 3 cut(s) 895, 916, 991
HincII GTYRAC 1 cut(s) 1083
HindII GTYRAC 1 cut(s) 1083
HinfI GANTC 3 cut(s) 8, 62, 739
HpaI GTTAAC 1 cut(s) 1083
HphI GGTGA 2 cut(s) 199, 1310
Hpy166II GTNNAC 2 cut(s) 84, 1083
Hpy188I TCNGA 7 cut(s) 7, 49, 61, 69, 367, 484, 1197
Hpy188III TCNNGA 5 cut(s) 395, 638, 731, 743, 1169
Hpy8I GTNNAC 2 cut(s) 84, 1083
HpyAV CCTTC 1 cut(s) 220
HpyCH4III ACNGT 4 cut(s) 341, 1042, 1104, 1243
HpyCH4IV ACGT 2 cut(s) 105, 1085
HpyCH4V TGCA 8 cut(s) 84, 293, 749, 851, 926, 1021, 1221, 1231
HpyF10VI GCNNNNNNNGC 6 cut(s) 299, 512, 542, 632, 673, 678
HpyF3I CTNAG 9 cut(s) 68, 78, 396, 429, 502, 511, 654, 677, 714
HpySE526I ACGT 2 cut(s) 105, 1085
Hsp92II CATG 7 cut(s) 267, 334, 676, 753, 855, 930, 1025
HspAI GCGC 3 cut(s) 895, 916, 991
KspAI GTTAAC 1 cut(s) 1083
Kzo9I GATC 5 cut(s) 267, 640, 657, 1203, 1264
LmnI GCTCC 5 cut(s) 49, 473, 892, 913, 1215
Lsp1109I GCAGC 6 cut(s) 277, 532, 697, 740, 1120, 1163
LweI GCATC 5 cut(s) 414, 736, 796, 855, 1008
MaeI CTAG 3 cut(s) 771, 903, 977
MaeII ACGT 2 cut(s) 105, 1085
MaeIII GTNAC 5 cut(s) 408, 568, 817, 884, 972
MalI GATC 5 cut(s) 269, 642, 659, 1205, 1266
MboI GATC 5 cut(s) 267, 640, 657, 1203, 1264
MboII GAAGA 5 cut(s) 370, 415, 428, 460, 1184
MflI RGATCY 1 cut(s) 267
MhlI GDGCHC 3 cut(s) 86, 470, 525
MluCI AATT 6 cut(s) 41, 368, 379, 419, 1071, 1176
Mph1103I ATGCAT 2 cut(s) 751, 1023
MseI TTAA 6 cut(s) 377, 459, 629, 881, 954, 1082
MslI CAYNNNNRTG 2 cut(s) 1026, 1260
MspA1I CMGCKG 2 cut(s) 290, 506
Mva1269I GAATGC 1 cut(s) 1233
MvnI CGCG 1 cut(s) 356
MwoI GCNNNNNNNGC 6 cut(s) 299, 512, 542, 632, 673, 678
NcoI CCATGG 1 cut(s) 330
NdeII GATC 5 cut(s) 267, 640, 657, 1203, 1264
NlaIII CATG 7 cut(s) 267, 334, 676, 753, 855, 930, 1025
NlaIV GGNNCC 5 cut(s) 51, 129, 269, 393, 650
NmeAIII GCCGAG 1 cut(s) 263
NmuCI GTSAC 2 cut(s) 817, 884
NsiI ATGCAT 2 cut(s) 751, 1023
NspI RCATGY 3 cut(s) 676, 753, 1025
PaeI GCATGC 3 cut(s) 676, 753, 1025
PctI GAATGC 1 cut(s) 1233
PfeI GAWTC 3 cut(s) 8, 62, 739
PkrI GCNGC 9 cut(s) 289, 292, 508, 544, 547, 712, 755, 1135, 1153
PsiI TTATAA 1 cut(s) 1076
Psp124BI GAGCTC 1 cut(s) 470
PspFI CCCAGC 1 cut(s) 828
PspN4I GGNNCC 5 cut(s) 51, 129, 269, 393, 650
PspPI GGNCC 1 cut(s) 648
PstI CTGCAG 1 cut(s) 295
PsuI RGATCY 1 cut(s) 267
RsaI GTAC 3 cut(s) 810, 826, 1142
RsaNI GTAC 3 cut(s) 809, 825, 1141
RseI CAYNNNNRTG 2 cut(s) 1026, 1260
SacI GAGCTC 1 cut(s) 470
SaqAI TTAA 6 cut(s) 377, 459, 629, 881, 954, 1082
SatI GCNGC 9 cut(s) 288, 291, 507, 543, 546, 711, 754, 1134, 1152
Sau3AI GATC 5 cut(s) 267, 640, 657, 1203, 1264
Sau96I GGNCC 1 cut(s) 648
SduI GDGCHC 3 cut(s) 86, 470, 525
SfaNI GCATC 5 cut(s) 414, 736, 796, 855, 1008
SfcI CTRYAG 1 cut(s) 291
SinI GGWCC 1 cut(s) 648
SmiMI CAYNNNNRTG 2 cut(s) 1026, 1260
SphI GCATGC 3 cut(s) 676, 753, 1025
Sse9I AATT 6 cut(s) 41, 368, 379, 419, 1071, 1176
SsiI CCGC 3 cut(s) 288, 506, 542
SspI AATATT 1 cut(s) 763
SspMI CTAG 3 cut(s) 771, 903, 977
SstI GAGCTC 1 cut(s) 470
StyI CCWWGG 2 cut(s) 330, 902
TaaI ACNGT 4 cut(s) 341, 1042, 1104, 1243
TaiI ACGT 2 cut(s) 108, 1088
TaqI TCGA 2 cut(s) 474, 639
TasI AATT 6 cut(s) 41, 368, 379, 419, 1071, 1176
TatI WGTACW 1 cut(s) 1140
TauI GCSGC 3 cut(s) 290, 509, 545
TfiI GAWTC 3 cut(s) 8, 62, 739
Tru1I TTAA 6 cut(s) 377, 459, 629, 881, 954, 1082
Tru9I TTAA 6 cut(s) 377, 459, 629, 881, 954, 1082
TscAI CASTG 3 cut(s) 86, 650, 1019
TseFI GTSAC 2 cut(s) 817, 884
TseI GCWGC 6 cut(s) 290, 545, 710, 753, 1133, 1151
Tsp45I GTSAC 2 cut(s) 817, 884
TspDTI ATGAA 1 cut(s) 1140
TspGWI ACGGA 1 cut(s) 796
TspRI CASTG 3 cut(s) 86, 650, 1019
VneI GTGCAC 1 cut(s) 82
VpaK11BI GGWCC 1 cut(s) 648
XagI CCTNNNNNAGG 1 cut(s) 196
XceI RCATGY 3 cut(s) 676, 753, 1025
XmaJI CCTAGG 1 cut(s) 902
XspI CTAG 3 cut(s) 771, 903, 977
Zsp2I ATGCAT 2 cut(s) 751, 1023
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.