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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G39910 |
| fragaria_vesca | FvH4_7g23870 |
| malus_domestica | MD07G1212900.v1.1 |
| prunus_persica | Prupe.2G245100_v2.0.a1 Prupe.2G245100_v2.0.a1 |
| pyrus_communis | pycom07g19570 |
| rosa_chinensis | RchiOBHm_Chr1g0339731 RchiOBHm_Chr1g0369221 RchiOBHm_Chr2g0110551 |
| rosa_laevigata | RLG00000001778 RLG00000001837 RLG00000015598 RLG00000027144 RLG00000034738 |
| rosa_multiflora | Rmu_sc0003829.1_g000022 Rmu_sc0004775.1_g000002 Rmu_sc0005807.1_g000001 Rmu_sc0008053.1_g000032 |
| rosa_roxburghii | Rroxscaffold_4G00287840 Rroxscaffold_6G00396450 Rroxscaffold_6G00412170 |
| rosa_rugosa | Rorug01G0349200 Rorug04G0051800 Rorug05G0139700 Rorug07G0313200 |
| rosa_samantha | Rh1AG356100 Rh1BG319700 Rh1CG060000 Rh1CG333700 Rh1DG064000 Rh1DG350400 Rh2CG222300 Rh5CG068700 Rh7BG045300 |
| rosa_wichuraiana | Rw1G031430 Rw7G029140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 401 |
| AccII | CGCG | 1 cut(s) | 101 |
| AciI | CCGC | 1 cut(s) | 272 |
| AcsI | RAATTY | 1 cut(s) | 189 |
| AcvI | CACGTG | 1 cut(s) | 214 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 510 |
| AgsI | TTSAA | 1 cut(s) | 392 |
| AhlI | ACTAGT | 1 cut(s) | 373 |
| AluBI | AGCT | 7 cut(s) | 15, 70, 97, 154, 305, 350, 406 |
| AluI | AGCT | 7 cut(s) | 15, 70, 97, 154, 305, 350, 406 |
| Alw21I | GWGCWC | 2 cut(s) | 72, 99 |
| Alw26I | GTCTC | 1 cut(s) | 356 |
| ApeKI | GCWGC | 2 cut(s) | 111, 455 |
| ApoI | RAATTY | 1 cut(s) | 189 |
| AspA2I | CCTAGG | 1 cut(s) | 227 |
| AspLEI | GCGC | 3 cut(s) | 103, 222, 318 |
| AvrII | CCTAGG | 1 cut(s) | 227 |
| BanII | GRGCYC | 3 cut(s) | 50, 72, 99 |
| BbrPI | CACGTG | 1 cut(s) | 214 |
| Bbv12I | GWGCWC | 2 cut(s) | 72, 99 |
| BbvCI | CCTCAGC | 1 cut(s) | 141 |
| BbvI | GCAGC | 2 cut(s) | 123, 442 |
| BccI | CCATC | 1 cut(s) | 500 |
| BceAI | ACGGC | 1 cut(s) | 45 |
| BcoDI | GTCTC | 1 cut(s) | 356 |
| BcuI | ACTAGT | 1 cut(s) | 373 |
| BfaI | CTAG | 4 cut(s) | 194, 228, 302, 374 |
| BfmI | CTRYAG | 1 cut(s) | 109 |
| BfoI | RGCGCY | 1 cut(s) | 223 |
| BisI | GCNGC | 3 cut(s) | 112, 272, 456 |
| BlnI | CCTAGG | 1 cut(s) | 227 |
| BlsI | GCNGC | 3 cut(s) | 113, 273, 457 |
| BmrI | ACTGGG | 1 cut(s) | 115 |
| BmsI | GCATC | 1 cut(s) | 333 |
| BmuI | ACTGGG | 1 cut(s) | 115 |
| BpmI | CTGGAG | 1 cut(s) | 140 |
| Bpu10I | CCTNAGC | 1 cut(s) | 141 |
| BsaAI | YACGTR | 1 cut(s) | 214 |
| BsaJI | CCNNGG | 1 cut(s) | 227 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 510 |
| Bse1I | ACTGG | 2 cut(s) | 87, 121 |
| BseDI | CCNNGG | 1 cut(s) | 227 |
| BseGI | GGATG | 1 cut(s) | 348 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 510 |
| BseMII | CTCAG | 1 cut(s) | 132 |
| BseNI | ACTGG | 2 cut(s) | 87, 121 |
| BseXI | GCAGC | 2 cut(s) | 123, 442 |
| BseYI | CCCAGC | 1 cut(s) | 15 |
| Bsh1236I | CGCG | 1 cut(s) | 101 |
| BsiHKAI | GWGCWC | 2 cut(s) | 72, 99 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 510 |
| BsmAI | GTCTC | 1 cut(s) | 356 |
| Bsp1286I | GDGCHC | 3 cut(s) | 50, 72, 99 |
| BspACI | CCGC | 1 cut(s) | 272 |
| BspCNI | CTCAG | 1 cut(s) | 133 |
| BspFNI | CGCG | 1 cut(s) | 101 |
| BspMAI | CTGCAG | 1 cut(s) | 113 |
| BsrI | ACTGG | 2 cut(s) | 87, 121 |
| BssECI | CCNNGG | 1 cut(s) | 227 |
| BssT1I | CCWWGG | 1 cut(s) | 227 |
| Bst4CI | ACNGT | 2 cut(s) | 367, 397 |
| BstBAI | YACGTR | 1 cut(s) | 214 |
| BstC8I | GCNNGC | 4 cut(s) | 99, 224, 348, 490 |
| BstDEI | CTNAG | 2 cut(s) | 141, 519 |
| BstF5I | GGATG | 1 cut(s) | 348 |
| BstFNI | CGCG | 1 cut(s) | 101 |
| BstH2I | RGCGCY | 1 cut(s) | 223 |
| BstHHI | GCGC | 3 cut(s) | 103, 222, 318 |
| BstMAI | GTCTC | 1 cut(s) | 356 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 38, 452 |
| BstSFI | CTRYAG | 1 cut(s) | 109 |
| BstUI | CGCG | 1 cut(s) | 101 |
| BstV1I | GCAGC | 2 cut(s) | 123, 442 |
| BtgZI | GCGATG | 1 cut(s) | 121 |
| BtsCI | GGATG | 1 cut(s) | 348 |
| BtsIMutI | CAGTG | 2 cut(s) | 80, 96 |
| Cac8I | GCNNGC | 4 cut(s) | 99, 224, 348, 490 |
| CfoI | GCGC | 3 cut(s) | 103, 222, 318 |
| CviAII | CATG | 2 cut(s) | 252, 411 |
| DdeI | CTNAG | 2 cut(s) | 141, 519 |
| Ecl136II | GAGCTC | 2 cut(s) | 70, 97 |
| Eco130I | CCWWGG | 1 cut(s) | 227 |
| Eco24I | GRGCYC | 3 cut(s) | 50, 72, 99 |
| Eco53kI | GAGCTC | 2 cut(s) | 70, 97 |
| Eco72I | CACGTG | 1 cut(s) | 214 |
| EcoICRI | GAGCTC | 2 cut(s) | 70, 97 |
| EcoT14I | CCWWGG | 1 cut(s) | 227 |
| EcoT38I | GRGCYC | 3 cut(s) | 50, 72, 99 |
| ErhI | CCWWGG | 1 cut(s) | 227 |
| FaeI | CATG | 2 cut(s) | 255, 414 |
| FaiI | YATR | 9 cut(s) | 253, 264, 401, 412, 430, 432, 453, 479, 486 |
| FatI | CATG | 2 cut(s) | 251, 410 |
| FauNDI | CATATG | 1 cut(s) | 430 |
| Fnu4HI | GCNGC | 3 cut(s) | 112, 272, 456 |
| FokI | GGATG | 1 cut(s) | 355 |
| FriOI | GRGCYC | 3 cut(s) | 50, 72, 99 |
| Fsp4HI | GCNGC | 3 cut(s) | 112, 272, 456 |
| FspBI | CTAG | 4 cut(s) | 194, 228, 302, 374 |
| GlaI | GCGC | 3 cut(s) | 102, 221, 317 |
| GluI | GCNGC | 3 cut(s) | 112, 272, 456 |
| GsaI | CCCAGC | 1 cut(s) | 19 |
| GsuI | CTGGAG | 1 cut(s) | 140 |
| HaeII | RGCGCY | 1 cut(s) | 223 |
| HhaI | GCGC | 3 cut(s) | 103, 222, 318 |
| Hin1II | CATG | 2 cut(s) | 255, 414 |
| Hin6I | GCGC | 3 cut(s) | 101, 220, 316 |
| HinP1I | GCGC | 3 cut(s) | 101, 220, 316 |
| Hpy188I | TCNGA | 1 cut(s) | 24 |
| Hpy188III | TCNNGA | 1 cut(s) | 194 |
| HpyAV | CCTTC | 1 cut(s) | 115 |
| HpyCH4III | ACNGT | 2 cut(s) | 367, 397 |
| HpyCH4IV | ACGT | 1 cut(s) | 213 |
| HpyCH4V | TGCA | 3 cut(s) | 111, 251, 346 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 38, 452 |
| HpyF3I | CTNAG | 2 cut(s) | 141, 519 |
| HpySE526I | ACGT | 1 cut(s) | 213 |
| Hsp92II | CATG | 2 cut(s) | 255, 414 |
| HspAI | GCGC | 3 cut(s) | 101, 220, 316 |
| LmnI | GCTCC | 4 cut(s) | 94, 159, 217, 238 |
| LpnPI | CCDG | 8 cut(s) | 63, 68, 134, 170, 236, 278, 298, 474 |
| Lsp1109I | GCAGC | 2 cut(s) | 123, 442 |
| LweI | GCATC | 1 cut(s) | 333 |
| MaeI | CTAG | 4 cut(s) | 194, 228, 302, 374 |
| MaeII | ACGT | 1 cut(s) | 213 |
| MaeIII | GTNAC | 3 cut(s) | 60, 209, 297 |
| MhlI | GDGCHC | 3 cut(s) | 50, 72, 99 |
| MluCI | AATT | 1 cut(s) | 189 |
| MmeI | TCCRAC | 1 cut(s) | 491 |
| MnlI | CCTC | 2 cut(s) | 136, 336 |
| MseI | TTAA | 4 cut(s) | 206, 279, 336, 470 |
| MvnI | CGCG | 1 cut(s) | 101 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 38, 452 |
| NdeI | CATATG | 1 cut(s) | 430 |
| NlaIII | CATG | 2 cut(s) | 255, 414 |
| NmuCI | GTSAC | 1 cut(s) | 209 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 471 |
| PkrI | GCNGC | 3 cut(s) | 113, 273, 457 |
| PmaCI | CACGTG | 1 cut(s) | 214 |
| PmlI | CACGTG | 1 cut(s) | 214 |
| Ppu21I | YACGTR | 1 cut(s) | 214 |
| PsiI | TTATAA | 1 cut(s) | 401 |
| Psp124BI | GAGCTC | 2 cut(s) | 72, 99 |
| PspCI | CACGTG | 1 cut(s) | 214 |
| PspFI | CCCAGC | 1 cut(s) | 15 |
| PstI | CTGCAG | 1 cut(s) | 113 |
| SacI | GAGCTC | 2 cut(s) | 72, 99 |
| SaqAI | TTAA | 4 cut(s) | 206, 279, 336, 470 |
| SatI | GCNGC | 3 cut(s) | 112, 272, 456 |
| SduI | GDGCHC | 3 cut(s) | 50, 72, 99 |
| SfaNI | GCATC | 1 cut(s) | 333 |
| SfcI | CTRYAG | 1 cut(s) | 109 |
| SpeI | ACTAGT | 1 cut(s) | 373 |
| Sse9I | AATT | 1 cut(s) | 189 |
| SsiI | CCGC | 1 cut(s) | 272 |
| SspMI | CTAG | 4 cut(s) | 194, 228, 302, 374 |
| SstI | GAGCTC | 2 cut(s) | 72, 99 |
| StyI | CCWWGG | 1 cut(s) | 227 |
| TaaI | ACNGT | 2 cut(s) | 367, 397 |
| TaiI | ACGT | 1 cut(s) | 216 |
| TaqI | TCGA | 1 cut(s) | 72 |
| TasI | AATT | 1 cut(s) | 189 |
| TauI | GCSGC | 1 cut(s) | 274 |
| Tru1I | TTAA | 4 cut(s) | 206, 279, 336, 470 |
| Tru9I | TTAA | 4 cut(s) | 206, 279, 336, 470 |
| TscAI | CASTG | 2 cut(s) | 87, 96 |
| TseFI | GTSAC | 1 cut(s) | 209 |
| TseI | GCWGC | 2 cut(s) | 111, 455 |
| Tsp45I | GTSAC | 1 cut(s) | 209 |
| TspRI | CASTG | 2 cut(s) | 87, 96 |
| XapI | RAATTY | 1 cut(s) | 189 |
| XbaI | TCTAGA | 1 cut(s) | 193 |
| XmaJI | CCTAGG | 1 cut(s) | 227 |
| XspI | CTAG | 4 cut(s) | 194, 228, 302, 374 |