Rorug05G0139700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0003324
Physical Location & Seq
Reverse (-)
12725040 .. 12728059
3020 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0139700.1

Sequence Viewer

Length: 2331 bp
ATGGTCTTATACCGGAGAATGGTCATTTCGCAGCTGATCTCATTGGTAGTGGTGGCCATAGCTGCAGTAGCATTAGCCGACAAAGCCCTCCCGCCTCCACATGCCCTGCCTAGTTGCCCTGACCACTGTGGCAATGTCAGAGTCCCCTATCCATTCGGCATAGGCGATGGTTGTTACCTTATACAAAAATTCAACCTCACCTGTGACGAATCCAGCCAACCTCCAACACTACACCGGACGGATGGTAGTCTCATTATTACTAACATATCCGTGGCCGAAGGTGAGTCGGAAGTTTTGAATCTCATAGCCTATGATTGTTACGACCAACAGGGTCATCAAAACGAAAGCATGTACAATTCCCCATCGCTCTGGCTCACTCCTCCGTTCACCATCTCTGGTACCAGAAACAAGTTCTTTGCCGTTGGCTATGACACCTATGCCATTTTTACAGGGTACCGCCCTTACCCTAATGATGATGCTAGGTACGTATCCGGGTGCATGTCCATAAGTGACATTCCTGACACTACTACTCCTGCTGCTAACGAGTCATGCACCGGCATTGGGTGTTGCCAAACTCCAATCCCTAACGGACTCAAAAATCGTACTGTCGAGTTGAGTAGTTACTCTAACCATACCTATGTATGGAAATTCAACCCGTGCAGCTACGCTTTCATTGTGGAAGAAGGCAATTTCACATTTAACCCGAATACAAGTTTTCAAGAACTGAAAAACACTGAACAGCTTCCTCTGATTCTTAATTGGGAAATCGCGGACGGGTCATGTGCTGAAGCTCAAAAGAGGCAGGATTATGCTTGCAAGGCGCATAGCAAGTGTGTCAACCGGACCATCGACATCAAGACTGAACCGTCTGGTTATTATTGCCAGTGCTTGCCAGGCTACCAAGGGAACCCATATCTCCCAGATGGTTGTCAAGATATTGATGAGTGCATCGCTTCAACGAACCCCTGCAACAATGGAACGTGCACAAATTCAGATGGAGATTACACATGTACATGTAACAAAGGTTTCAGAAACGAAAACCCAAAGAGTTGCATACAGAACACTCCTATATCAAAGAACAAGTCCCTGAAAGTTTCCTTGGGTGTCTCTCTGAGCTTCTTAGGGGTATTGCTTGTAACATTTTGGATATACTGCGGACTGAAGAGAAGAAAGTTCAAGATACTCAAAGAGAAGTACTTCAAACACAATGGTGGCTTCTTGTTACAACAAAAATTGGAGAATTTCGATGGACCTCAAGCAGCCAAAATATTTACTAGAGAAGAACTTAAGAAGGCCACAAACAACTTTCATGACAGTGAAAAAATTGGTGAAGGTGGCTATGGATTTGTTTACAAAGGAACACTATCAAATGGAAATAAGGTTGCCATAAAGGTGTCAAAAAGTAGTGCCCCAATGACCCAAAGTAATCAGTTCATTAATGAGGTGATTGTTCTTTCTCAGATCAACCACAGAAATGTGGTGAAGCTTCTGGGTTGTTGTTTGGAGACCCAAACGCCTTTATTAGTGTATGAGTTCGTCAGCAACGGCACACTTTATGAGCATATTCATAAAAAGAATGGCAAGGGACCGCTTTCCTTTGGGCTACGAATGAAGATAGCAACAGAAACAGCAGGATCACTAGCATACTTGCACTACTCTACTTCGATGCAAATTGTGCACCGAGATGTGAAGGCAACAAACATCCTACTGGATGAGAATTTCACAGCGAAAGTGTCAGACTTTGGAGCTTCAAAATTGGTTCCCGAAGATCAAAATCAACTGTCTACTTTAGTGCAAGGGACGATAGGGTACTTGGACCCTGAATATCTTCAGTCAAACACACTGACAGAGAAAAGTGACGTATATAGCTTCGGCGTTGTCCTTGTGGAGCTAATAACAAGTCAAGTGGCAATTTCTTATCAGAAGCCTGAGGCGGAGAGAAGCCTAGCAAATTTTTTTGTTACTTCTGTGGAAGAGAATCGCCTAGATCAGATTCTCGATCATGAAATAATCAAAGAGGGGAGCTTCGAAACAGCTGAACAAGTAGCCCATCTGGCCAAAAGTTGTTTAAGTTTGAAAGGGAGCGATAGGCCTACCATGAAAGAAGTAGCAATGAAGCTAGAGGGAGTATTGCAAGTTATGGCAAAGCATCCATGGGGAAAGGCTGATGCCTCACCAAAAGAGACTGATTACTTGCAGCTTGCGTCACATTCAAAAGCCTACGTTGTTGATGTTAGAGGTGATGAAGGTGAAGTTATAACCAGTATTGACTACGACCGGAGCATCCAGATTCAACCCCTGATGATGAAGCCTTATGATGGAGGCCGATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

776

Amino Acids

86.08

Weight (kDa)

5.99

Isoelectric Point (pI)

33.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 39 - 95 5.2e-12 Wall-associated receptor kinase galacturonan-binding
EGF_CA PF07645 312 - 351 1.9e-07 Calcium-binding EGF domain
Pkinase PF00069 436 - 704 9.4e-49 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 439 - 707 8.1e-51 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2258
AasI GACNNNNNNGTC 1 cut(s) 865
Acc65I GGTACC 2 cut(s) 398, 453
AccB1I GGYRCC 2 cut(s) 398, 453
AccI GTMKAC 1 cut(s) 1784
AccII CGCG 1 cut(s) 770
AciI CCGC 6 cut(s) 92, 457, 770, 1155, 1589, 1934
AclWI GGATC 1 cut(s) 1642
AcoI YGGCCR 3 cut(s) 54, 273, 2055
AcsI RAATTY 6 cut(s) 188, 647, 988, 1240, 1717, 1951
AcuI CTGAAG 3 cut(s) 807, 1181, 1814
AfaI GTAC 8 cut(s) 353, 400, 455, 485, 604, 1012, 1196, 1811
AfiI CCNNNNNNNGG 4 cut(s) 19, 561, 642, 2318
AflII CTTAAG 1 cut(s) 1286
AflIII ACRYGT 2 cut(s) 1007, 1013
AjnI CCWGG 1 cut(s) 892
AjuI GAANNNNNNNTTGG 2 cut(s) 1082, 1114
AleI CACNNNNGTG 1 cut(s) 1209
Alw21I GWGCWC 2 cut(s) 986, 1680
Alw26I GTCTC 4 cut(s) 254, 1111, 1499, 2177
Alw44I GTGCAC 2 cut(s) 982, 1676
AlwI GGATC 1 cut(s) 1642
AoxI GGCC 6 cut(s) 54, 273, 1293, 2055, 2090, 2323
ApaLI GTGCAC 2 cut(s) 982, 1676
ApeKI GCWGC 6 cut(s) 31, 62, 536, 660, 1259, 2197
ApoI RAATTY 6 cut(s) 188, 647, 988, 1240, 1717, 1951
ArsI GACNNNNNNTTYG 2 cut(s) 1067, 1099
AseI ATTAAT 1 cut(s) 1437
Asp700I GAANNNNTTC 3 cut(s) 741, 1196, 1827
Asp718I GGTACC 2 cut(s) 398, 453
AspLEI GCGC 1 cut(s) 823
AspS9I GGNCC 4 cut(s) 843, 1250, 1586, 1816
AsuC2I CCSGG 1 cut(s) 493
AsuHPI GGTGA 9 cut(s) 190, 293, 379, 1340, 1456, 1492, 2166, 2252, 2261
AsuII TTCGAA 1 cut(s) 2028
AvaII GGWCC 4 cut(s) 843, 1250, 1586, 1816
AxyI CCTNAGG 1 cut(s) 1929
BaeGI GKGCMC 3 cut(s) 986, 1411, 1680
BalI TGGCCA 2 cut(s) 56, 2057
BanI GGYRCC 2 cut(s) 398, 453
Bbv12I GWGCWC 2 cut(s) 986, 1680
BbvI GCAGC 6 cut(s) 43, 49, 523, 672, 1271, 2209
BceAI ACGGC 2 cut(s) 404, 1561
BciT130I CCWGG 1 cut(s) 894
BciVI GTATCC 1 cut(s) 499
BcnI CCSGG 1 cut(s) 493
BcoDI GTCTC 4 cut(s) 254, 1111, 1499, 2177
BfaI CTAG 7 cut(s) 111, 480, 1275, 1640, 1946, 1985, 2120
BfmI CTRYAG 1 cut(s) 63
BfrI CTTAAG 1 cut(s) 1286
BfuI GTATCC 1 cut(s) 499
BglI GCCNNNNNGGC 1 cut(s) 2054
BisI GCNGC 6 cut(s) 32, 63, 537, 661, 1260, 2198
BlsI GCNGC 6 cut(s) 33, 64, 538, 662, 1261, 2199
BmcAI AGTACT 1 cut(s) 1196
Bme1390I CCNGG 2 cut(s) 493, 894
Bme18I GGWCC 4 cut(s) 843, 1250, 1586, 1816
BmgT120I GGNCC 4 cut(s) 843, 1250, 1586, 1816
BmiI GGNNCC 6 cut(s) 400, 455, 908, 1587, 1761, 1818
BmrFI CCNGG 2 cut(s) 493, 894
BmsI GCATC 6 cut(s) 466, 957, 1656, 2158, 2158, 2292
Bpu14I TTCGAA 1 cut(s) 2028
BpuEI CTTGAG 1 cut(s) 1239
BpuMI CCSGG 1 cut(s) 493
BsaAI YACGTR 1 cut(s) 487
BsaBI GATNNNNATC 1 cut(s) 1773
BsaI GGTCTC 1 cut(s) 1499
BsaJI CCNNGG 4 cut(s) 270, 901, 1098, 2153
BsaWI WCCGGW 4 cut(s) 12, 234, 840, 2277
BsaXI ACNNNNNCTCC 2 cut(s) 514, 544
Bsc4I CCNNNNNNNGG 4 cut(s) 19, 561, 642, 2318
Bse118I RCCGGY 1 cut(s) 554
Bse1I ACTGG 3 cut(s) 883, 1713, 2262
Bse21I CCTNAGG 1 cut(s) 1929
Bse3DI GCAATG 2 cut(s) 139, 2118
Bse8I GATNNNNATC 1 cut(s) 1773
BseBI CCWGG 1 cut(s) 894
BseDI CCNNGG 4 cut(s) 270, 901, 1098, 2153
BseGI GGATG 5 cut(s) 247, 1701, 1717, 2149, 2283
BseJI GATNNNNATC 1 cut(s) 1773
BseLI CCNNNNNNNGG 4 cut(s) 19, 561, 642, 2318
BseMI GCAATG 2 cut(s) 139, 2118
BseMII CTCAG 3 cut(s) 1103, 1472, 1920
BseNI ACTGG 3 cut(s) 883, 1713, 2262
BseRI GAGGAG 1 cut(s) 369
BseSI GKGCMC 3 cut(s) 986, 1411, 1680
BseXI GCAGC 6 cut(s) 43, 49, 523, 672, 1271, 2209
BsgI GTGCAG 1 cut(s) 679
Bsh1236I CGCG 1 cut(s) 770
Bsh1285I CGRYCG 1 cut(s) 2278
BshFI GGCC 6 cut(s) 56, 275, 1295, 2057, 2092, 2325
BshNI GGYRCC 2 cut(s) 398, 453
BsiEI CGRYCG 1 cut(s) 2278
BsiHKAI GWGCWC 2 cut(s) 986, 1680
BsiSI CCGG 6 cut(s) 13, 235, 492, 555, 841, 2278
BslFI GGGAC 4 cut(s) 128, 1069, 1599, 1813
BslI CCNNNNNNNGG 4 cut(s) 19, 561, 642, 2318
BsmAI GTCTC 4 cut(s) 254, 1111, 1499, 2177
BsmFI GGGAC 4 cut(s) 128, 1069, 1599, 1813
BsnI GGCC 6 cut(s) 56, 275, 1295, 2057, 2092, 2325
Bso31I GGTCTC 1 cut(s) 1499
Bsp119I TTCGAA 1 cut(s) 2028
Bsp1286I GDGCHC 3 cut(s) 986, 1411, 1680
Bsp1407I TGTACA 2 cut(s) 351, 1010
Bsp143I GATC 6 cut(s) 36, 1461, 1634, 1768, 1987, 1999
Bsp19I CCATGG 1 cut(s) 2153
BspACI CCGC 6 cut(s) 92, 457, 770, 1155, 1589, 1934
BspANI GGCC 6 cut(s) 56, 275, 1295, 2057, 2092, 2325
BspCNI CTCAG 3 cut(s) 1104, 1471, 1921
BspFNI CGCG 1 cut(s) 770
BspHI TCATGA 2 cut(s) 1309, 2002
BspLI GGNNCC 6 cut(s) 400, 455, 908, 1587, 1761, 1818
BspMAI CTGCAG 1 cut(s) 67
BspPI GGATC 1 cut(s) 1642
BspT104I TTCGAA 1 cut(s) 2028
BspT107I GGYRCC 2 cut(s) 398, 453
BspTI CTTAAG 1 cut(s) 1286
BspTNI GGTCTC 1 cut(s) 1499
BsrDI GCAATG 2 cut(s) 139, 2118
BsrFI RCCGGY 1 cut(s) 554
BsrGI TGTACA 2 cut(s) 351, 1010
BsrI ACTGG 3 cut(s) 883, 1713, 2262
BssAI RCCGGY 1 cut(s) 554
BssECI CCNNGG 4 cut(s) 270, 901, 1098, 2153
BssMI GATC 6 cut(s) 36, 1461, 1634, 1768, 1987, 1999
BssT1I CCWWGG 3 cut(s) 901, 1098, 2153
Bst2UI CCWGG 1 cut(s) 894
Bst4CI ACNGT 5 cut(s) 128, 607, 867, 1316, 1782
Bst6I CTCTTC 2 cut(s) 1157, 1968
BstAFI CTTAAG 1 cut(s) 1286
BstAPI GCANNNNNTGC 1 cut(s) 1675
BstAUI TGTACA 2 cut(s) 351, 1010
BstBAI YACGTR 1 cut(s) 487
BstBI TTCGAA 1 cut(s) 2028
BstC8I GCNNGC 3 cut(s) 814, 890, 2202
BstDEI CTNAG 4 cut(s) 1112, 1120, 1458, 1929
BstDSI CCRYGG 2 cut(s) 270, 2153
BstF5I GGATG 5 cut(s) 247, 1701, 1717, 2149, 2283
BstFNI CGCG 1 cut(s) 770
BstHHI GCGC 1 cut(s) 823
BstKTI GATC 6 cut(s) 39, 1464, 1637, 1771, 1990, 2002
BstMAI GTCTC 4 cut(s) 254, 1111, 1499, 2177
BstMBI GATC 6 cut(s) 36, 1461, 1634, 1768, 1987, 1999
BstMCI CGRYCG 1 cut(s) 2278
BstMWI GCNNNNNNNGC 7 cut(s) 62, 68, 83, 818, 894, 1675, 2054
BstNI CCWGG 1 cut(s) 894
BstNSI RCATGY 5 cut(s) 104, 352, 502, 1011, 1017
BstSCI CCNGG 2 cut(s) 491, 892
BstSFI CTRYAG 1 cut(s) 63
BstSLI GKGCMC 3 cut(s) 986, 1411, 1680
BstSNI TACGTA 1 cut(s) 487
BstUI CGCG 1 cut(s) 770
BstV1I GCAGC 6 cut(s) 43, 49, 523, 672, 1271, 2209
BstXI CCANNNNNNTGG 1 cut(s) 369
Bsu36I CCTNAGG 1 cut(s) 1929
BsuI GTATCC 1 cut(s) 499
BsuRI GGCC 6 cut(s) 56, 275, 1295, 2057, 2092, 2325
BtgI CCRYGG 2 cut(s) 270, 2153
BtgZI GCGATG 3 cut(s) 180, 348, 934
BtsCI GGATG 5 cut(s) 247, 1701, 1717, 2149, 2283
BtsIMutI CAGTG 5 cut(s) 124, 732, 890, 1321, 1841
Cac8I GCNNGC 3 cut(s) 814, 890, 2202
CciI TCATGA 2 cut(s) 1309, 2002
CfoI GCGC 1 cut(s) 823
Cfr10I RCCGGY 1 cut(s) 554
Cfr13I GGNCC 4 cut(s) 843, 1250, 1586, 1816
CseI GACGC 1 cut(s) 2193
Csp6I GTAC 8 cut(s) 352, 399, 454, 484, 603, 1011, 1195, 1810
CspCI CAANNNNNGTGG 2 cut(s) 1887, 1922
CviQI GTAC 8 cut(s) 352, 399, 454, 484, 603, 1011, 1195, 1810
DdeI CTNAG 4 cut(s) 1112, 1120, 1458, 1929
DpnI GATC 6 cut(s) 38, 1463, 1636, 1770, 1989, 2001
DpnII GATC 6 cut(s) 36, 1461, 1634, 1768, 1987, 1999
DrdI GACNNNNNNGTC 1 cut(s) 865
DseDI GACNNNNNNGTC 1 cut(s) 865
EaeI YGGCCR 3 cut(s) 54, 273, 2055
Eam1104I CTCTTC 2 cut(s) 1157, 1968
EarI CTCTTC 2 cut(s) 1157, 1968
EciI GGCGGA 1 cut(s) 1949
Eco105I TACGTA 1 cut(s) 487
Eco130I CCWWGG 3 cut(s) 901, 1098, 2153
Eco147I AGGCCT 1 cut(s) 2092
Eco31I GGTCTC 1 cut(s) 1499
Eco47I GGWCC 4 cut(s) 843, 1250, 1586, 1816
Eco57I CTGAAG 3 cut(s) 807, 1181, 1814
Eco81I CCTNAGG 1 cut(s) 1929
EcoRII CCWGG 1 cut(s) 892
EcoT14I CCWWGG 3 cut(s) 901, 1098, 2153
ErhI CCWWGG 3 cut(s) 901, 1098, 2153
FaqI GGGAC 4 cut(s) 128, 1069, 1599, 1813
FauI CCCGC 1 cut(s) 99
FblI GTMKAC 1 cut(s) 1784
Fnu4HI GCNGC 6 cut(s) 32, 63, 537, 661, 1260, 2198
FokI GGATG 5 cut(s) 254, 1688, 1724, 2136, 2270
Fsp4HI GCNGC 6 cut(s) 32, 63, 537, 661, 1260, 2198
FspBI CTAG 7 cut(s) 111, 480, 1275, 1640, 1946, 1985, 2120
GlaI GCGC 1 cut(s) 822
GluI GCNGC 6 cut(s) 32, 63, 537, 661, 1260, 2198
HaeIII GGCC 6 cut(s) 56, 275, 1295, 2057, 2092, 2325
HapII CCGG 6 cut(s) 13, 235, 492, 555, 841, 2278
HgaI GACGC 1 cut(s) 2193
HhaI GCGC 1 cut(s) 823
Hin6I GCGC 1 cut(s) 821
HinP1I GCGC 1 cut(s) 821
HincII GTYRAC 1 cut(s) 838
HindII GTYRAC 1 cut(s) 838
HindIII AAGCTT 1 cut(s) 1484
HpaII CCGG 6 cut(s) 13, 235, 492, 555, 841, 2278
HphI GGTGA 9 cut(s) 190, 293, 379, 1340, 1456, 1492, 2166, 2252, 2261
Hpy166II GTNNAC 6 cut(s) 387, 838, 984, 1351, 1678, 1785
Hpy8I GTNNAC 6 cut(s) 387, 838, 984, 1351, 1678, 1785
HpyAV CCTTC 6 cut(s) 272, 677, 1285, 1325, 1684, 2240
HpyCH4III ACNGT 5 cut(s) 128, 607, 867, 1316, 1782
HpyCH4IV ACGT 4 cut(s) 486, 980, 1860, 2223
HpyF10VI GCNNNNNNNGC 7 cut(s) 62, 68, 83, 818, 894, 1675, 2054
HpyF3I CTNAG 4 cut(s) 1112, 1120, 1458, 1929
HpySE526I ACGT 4 cut(s) 486, 980, 1860, 2223
HspAI GCGC 1 cut(s) 821
KpnI GGTACC 2 cut(s) 402, 457
Kzo9I GATC 6 cut(s) 36, 1461, 1634, 1768, 1987, 1999
LmnI GCTCC 5 cut(s) 1745, 1888, 2022, 2082, 2280
Lsp1109I GCAGC 6 cut(s) 43, 49, 523, 672, 1271, 2209
LweI GCATC 6 cut(s) 466, 957, 1656, 2158, 2158, 2292
MaeI CTAG 7 cut(s) 111, 480, 1275, 1640, 1946, 1985, 2120
MaeII ACGT 4 cut(s) 486, 980, 1860, 2223
MalI GATC 6 cut(s) 38, 1463, 1636, 1770, 1989, 2001
MboI GATC 6 cut(s) 36, 1461, 1634, 1768, 1987, 1999
MboII GAAGA 8 cut(s) 692, 1174, 1179, 1292, 1624, 1778, 1820, 1985
MhlI GDGCHC 3 cut(s) 986, 1411, 1680
MlsI TGGCCA 2 cut(s) 56, 2057
MluNI TGGCCA 2 cut(s) 56, 2057
MlyI GAGTC 4 cut(s) 150, 293, 554, 585
MmeI TCCRAC 2 cut(s) 248, 267
Mox20I TGGCCA 2 cut(s) 56, 2057
MroXI GAANNNNTTC 3 cut(s) 741, 1196, 1827
MscI TGGCCA 2 cut(s) 56, 2057
MseI TTAA 5 cut(s) 699, 756, 1287, 1437, 2069
MslI CAYNNNNRTG 8 cut(s) 269, 636, 1012, 1209, 1314, 1391, 1473, 1683
Msp20I TGGCCA 2 cut(s) 56, 2057
MspA1I CMGCKG 2 cut(s) 34, 2036
MspCI CTTAAG 1 cut(s) 1286
MspI CCGG 6 cut(s) 13, 235, 492, 555, 841, 2278
MspR9I CCNGG 2 cut(s) 493, 894
MvaI CCWGG 1 cut(s) 894
MvnI CGCG 1 cut(s) 770
MwoI GCNNNNNNNGC 7 cut(s) 62, 68, 83, 818, 894, 1675, 2054
NciI CCSGG 1 cut(s) 493
NcoI CCATGG 1 cut(s) 2153
NdeII GATC 6 cut(s) 36, 1461, 1634, 1768, 1987, 1999
NlaIV GGNNCC 6 cut(s) 400, 455, 908, 1587, 1761, 1818
NmuCI GTSAC 4 cut(s) 203, 509, 1856, 2205
NspI RCATGY 5 cut(s) 104, 352, 502, 1011, 1017
NspV TTCGAA 1 cut(s) 2028
OliI CACNNNNGTG 1 cut(s) 1209
PagI TCATGA 2 cut(s) 1309, 2002
PceI AGGCCT 1 cut(s) 2092
PciI ACATGT 2 cut(s) 1007, 1013
PcsI WCGNNNNNNNCGW 1 cut(s) 162
PdmI GAANNNNTTC 3 cut(s) 741, 1196, 1827
PfeI GAWTC 6 cut(s) 209, 298, 751, 1978, 1993, 2290
PkrI GCNGC 6 cut(s) 33, 64, 538, 662, 1261, 2199
PleI GAGTC 4 cut(s) 149, 292, 553, 585
PpsI GAGTC 4 cut(s) 149, 292, 553, 585
Ppu21I YACGTR 1 cut(s) 487
PscI ACATGT 2 cut(s) 1007, 1013
PshBI ATTAAT 1 cut(s) 1437
PsiI TTATAA 1 cut(s) 2258
Psp6I CCWGG 1 cut(s) 892
PspGI CCWGG 1 cut(s) 892
PspN4I GGNNCC 6 cut(s) 400, 455, 908, 1587, 1761, 1818
PspPI GGNCC 4 cut(s) 843, 1250, 1586, 1816
PstI CTGCAG 1 cut(s) 67
PvuII CAGCTG 2 cut(s) 34, 2036
RsaI GTAC 8 cut(s) 353, 400, 455, 485, 604, 1012, 1196, 1811
RsaNI GTAC 8 cut(s) 352, 399, 454, 484, 603, 1011, 1195, 1810
RseI CAYNNNNRTG 8 cut(s) 269, 636, 1012, 1209, 1314, 1391, 1473, 1683
SaqAI TTAA 5 cut(s) 699, 756, 1287, 1437, 2069
SatI GCNGC 6 cut(s) 32, 63, 537, 661, 1260, 2198
Sau3AI GATC 6 cut(s) 36, 1461, 1634, 1768, 1987, 1999
Sau96I GGNCC 4 cut(s) 843, 1250, 1586, 1816
ScaI AGTACT 1 cut(s) 1196
SchI GAGTC 4 cut(s) 150, 293, 554, 585
ScrFI CCNGG 2 cut(s) 493, 894
SduI GDGCHC 3 cut(s) 986, 1411, 1680
SfaNI GCATC 6 cut(s) 466, 957, 1656, 2158, 2158, 2292
SfcI CTRYAG 1 cut(s) 63
SfuI TTCGAA 1 cut(s) 2028
SinI GGWCC 4 cut(s) 843, 1250, 1586, 1816
SmiMI CAYNNNNRTG 8 cut(s) 269, 636, 1012, 1209, 1314, 1391, 1473, 1683
SmlI CTYRAG 2 cut(s) 1254, 1286
SmoI CTYRAG 2 cut(s) 1254, 1286
SnaBI TACGTA 1 cut(s) 487
SseBI AGGCCT 1 cut(s) 2092
SsiI CCGC 6 cut(s) 92, 457, 770, 1155, 1589, 1934
SspI AATATT 1 cut(s) 1269
SspMI CTAG 7 cut(s) 111, 480, 1275, 1640, 1946, 1985, 2120
StuI AGGCCT 1 cut(s) 2092
StyD4I CCNGG 2 cut(s) 491, 892
StyI CCWWGG 3 cut(s) 901, 1098, 2153
TaaI ACNGT 5 cut(s) 128, 607, 867, 1316, 1782
TaiI ACGT 4 cut(s) 489, 983, 1863, 2226
TaqI TCGA 6 cut(s) 609, 849, 1245, 1664, 1998, 2028
TatI WGTACW 3 cut(s) 351, 1010, 1194
TfiI GAWTC 6 cut(s) 209, 298, 751, 1978, 1993, 2290
Tru1I TTAA 5 cut(s) 699, 756, 1287, 1437, 2069
Tru9I TTAA 5 cut(s) 699, 756, 1287, 1437, 2069
TscAI CASTG 5 cut(s) 131, 739, 890, 1321, 1848
TseFI GTSAC 4 cut(s) 203, 509, 1856, 2205
TseI GCWGC 6 cut(s) 31, 62, 536, 660, 1259, 2197
Tsp45I GTSAC 4 cut(s) 203, 509, 1856, 2205
TspGWI ACGGA 4 cut(s) 254, 259, 372, 603
TspRI CASTG 5 cut(s) 131, 739, 890, 1321, 1848
Vha464I CTTAAG 1 cut(s) 1286
VneI GTGCAC 2 cut(s) 982, 1676
VpaK11BI GGWCC 4 cut(s) 843, 1250, 1586, 1816
VspI ATTAAT 1 cut(s) 1437
XapI RAATTY 6 cut(s) 188, 647, 988, 1240, 1717, 1951
XceI RCATGY 5 cut(s) 104, 352, 502, 1011, 1017
XmiI GTMKAC 1 cut(s) 1784
XmnI GAANNNNTTC 3 cut(s) 741, 1196, 1827
XspI CTAG 7 cut(s) 111, 480, 1275, 1640, 1946, 1985, 2120
ZrmI AGTACT 1 cut(s) 1196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.